Carg04421 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04421
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-H2 finger protein ATL46-like
Location	Carg_Chr04: 20476470 .. 20477585 (-)
RNA-Seq Expression	Carg04421
Synteny	Carg04421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGGATTCGGCATCAAATCTTTCAGAAAGATGGATTTCTGAGCTACCCTCCTCCTATGCCGCCTTCTTCTTCTTCCCCTTTTGATGTAATTTACAATAAGGAACCTACCCCACCAGCACCGCCATCTGCAACCTCGTCCGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTGATTTTGGCTGTTCTGTTCTTCATTTCTGGTCTGCTCCATCTTCTTGTTAGATTCCTTATAAAGCATCCATCTTCCTCAGCCTCCTCTCAATCCAACAGAAACCCAGAACTTTCTCCTTCTGATGCACTTCAAAGACAGCTTCAGCAGCTCTTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGACGCACTTCCTGTTTTTAAGTATAAGGAGATAGTGGGGCTTAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTATTCTGAAAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCTTTCCATGTCAATTGTATAGACACTTGGCTCTTGTCAAATTCGACATGCCCTCTTTGTCGAGGAACGCTATTCAACCCCGGTTTTTCAATCGAAAATCCAATGTTCGATTTCAATGAACTGGGAGAAGAAGCTGAATGTGTTGGTAATGCAGATCATAGGTTGCCTAATTGTCAAAAAAGAATGGAGATTCAAGAGGTAGTGAATGAAAAAGGAGGTTTCCCAGTGAAGCTTGGAAAATTCAGAAGAATGAACATAGCTGAGGCTGTAGAGACCGAAGTTGGAGAGACCAGTAGTAGCAACTTGGATGCTAGGAGATGTTACTCAATGGGATCATATCAATACGTTGTTATAGACGCTGAGCTCAGAGTTCCCTTGTCTAGAGCTCAACAAGAGAGTGACCATAAACAGCCCTTCAAAGGGACAGAACCAAAGGGCATTGCAGATTTGGATGGGAAGAAGCTGAATAGTGTAGCTAAAGGAGAGAGTTACTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGCATTTGAGTTCTACTGAGCCGCAGATAGGTATGGATTCTTCTCTTAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATCATAA

mRNA sequence

ATGACTCGGATTCGGCATCAAATCTTTCAGAAAGATGGATTTCTGAGCTACCCTCCTCCTATGCCGCCTTCTTCTTCTTCCCCTTTTGATGTAATTTACAATAAGGAACCTACCCCACCAGCACCGCCATCTGCAACCTCGTCCGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTGATTTTGGCTGTTCTGTTCTTCATTTCTGGTCTGCTCCATCTTCTTGTTAGATTCCTTATAAAGCATCCATCTTCCTCAGCCTCCTCTCAATCCAACAGAAACCCAGAACTTTCTCCTTCTGATGCACTTCAAAGACAGCTTCAGCAGCTCTTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGACGCACTTCCTGTTTTTAAGTATAAGGAGATAGTGGGGCTTAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTATTCTGAAAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCTTTCCATGTCAATTGTATAGACACTTGGCTCTTGTCAAATTCGACATGCCCTCTTTGTCGAGGAACGCTATTCAACCCCGGTTTTTCAATCGAAAATCCAATGTTCGATTTCAATGAACTGGGAGAAGAAGCTGAATGTGTTGGTAATGCAGATCATAGGTTGCCTAATTGTCAAAAAAGAATGGAGATTCAAGAGGTAGTGAATGAAAAAGGAGGTTTCCCAGTGAAGCTTGGAAAATTCAGAAGAATGAACATAGCTGAGGCTGTAGAGACCGAAGTTGGAGAGACCAGTAGTAGCAACTTGGATGCTAGGAGATGTTACTCAATGGGATCATATCAATACGTTGTTATAGACGCTGAGCTCAGAGTTCCCTTGTCTAGAGCTCAACAAGAGAGTGACCATAAACAGCCCTTCAAAGGGACAGAACCAAAGGGCATTGCAGATTTGGATGGGAAGAAGCTGAATAGTGTAGCTAAAGGAGAGAGTTACTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGCATTTGAGTTCTACTGAGCCGCAGATAGGTATGGATTCTTCTCTTAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATCATAA

Coding sequence (CDS)

ATGACTCGGATTCGGCATCAAATCTTTCAGAAAGATGGATTTCTGAGCTACCCTCCTCCTATGCCGCCTTCTTCTTCTTCCCCTTTTGATGTAATTTACAATAAGGAACCTACCCCACCAGCACCGCCATCTGCAACCTCGTCCGGTACGAGGATAAGTCCAGCAGTTCTTTTTATCATAGTGATTTTGGCTGTTCTGTTCTTCATTTCTGGTCTGCTCCATCTTCTTGTTAGATTCCTTATAAAGCATCCATCTTCCTCAGCCTCCTCTCAATCCAACAGAAACCCAGAACTTTCTCCTTCTGATGCACTTCAAAGACAGCTTCAGCAGCTCTTCCATCTCCATGATTCTGGTTTAGATCAAGCTTTTATAGACGCACTTCCTGTTTTTAAGTATAAGGAGATAGTGGGGCTTAAGGAGCCATTTGATTGTGCTGTTTGCTTGTGTGAGTATTCTGAAAAGGACCAACTCAGATTACTTCCTATGTGCAGCCATGCTTTCCATGTCAATTGTATAGACACTTGGCTCTTGTCAAATTCGACATGCCCTCTTTGTCGAGGAACGCTATTCAACCCCGGTTTTTCAATCGAAAATCCAATGTTCGATTTCAATGAACTGGGAGAAGAAGCTGAATGTGTTGGTAATGCAGATCATAGGTTGCCTAATTGTCAAAAAAGAATGGAGATTCAAGAGGTAGTGAATGAAAAAGGAGGTTTCCCAGTGAAGCTTGGAAAATTCAGAAGAATGAACATAGCTGAGGCTGTAGAGACCGAAGTTGGAGAGACCAGTAGTAGCAACTTGGATGCTAGGAGATGTTACTCAATGGGATCATATCAATACGTTGTTATAGACGCTGAGCTCAGAGTTCCCTTGTCTAGAGCTCAACAAGAGAGTGACCATAAACAGCCCTTCAAAGGGACAGAACCAAAGGGCATTGCAGATTTGGATGGGAAGAAGCTGAATAGTGTAGCTAAAGGAGAGAGTTACTCTGTTTCGAAGATCTGGCTTTGGTCTAAAAAGGGGAAGCATTTGAGTTCTACTGAGCCGCAGATAGGTATGGATTCTTCTCTTAATACAGACTTGCCATGGTTGAGGCAAACACAAGGGCCATCATAA

Protein sequence

MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFPVKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTDLPWLRQTQGPS

Homology

[Close]

BLAST of Carg04421 vs. NCBI nr
Match: KAG6602449.1 (RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033132.1 RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 750.4 bits (1936), Expect = 7.6e-213
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 372
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Carg04421 vs. NCBI nr
Match: XP_022923642.1 (RING-H2 finger protein ATL46-like [Cucurbita moschata])

HSP 1 Score: 748.8 bits (1932), Expect = 2.2e-212
Identity = 370/371 (99.73%), Postives = 370/371 (99.73%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQE DH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 372
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Carg04421 vs. NCBI nr
Match: XP_023552085.1 (RING-H2 finger protein ATL46-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 742.7 bits (1916), Expect = 1.6e-210
Identity = 367/371 (98.92%), Postives = 369/371 (99.46%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPA PSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSS+SSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSSSSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF+ELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQE DH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 372
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Carg04421 vs. NCBI nr
Match: XP_022990921.1 (RING-H2 finger protein ATL46-like [Cucurbita maxima])

HSP 1 Score: 731.5 bits (1887), Expect = 3.7e-207
Identity = 365/371 (98.38%), Postives = 366/371 (98.65%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPA PSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF+ELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQE DH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGT  KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSST PQIGMDSSLNTD
Sbjct: 301 KQPFKGT-AKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTLPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 372
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 370

[Close]

BLAST of Carg04421 vs. NCBI nr
Match: XP_023550828.1 (RING-H2 finger protein ATL46-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 647.1 bits (1668), Expect = 9.1e-182
Identity = 327/378 (86.51%), Postives = 346/378 (91.53%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           M RIRHQIFQ D FLSYPPP+  SSS+PFD IYNKEP PPA PS TSSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDAFLSYPPPVMTSSSTPFDGIYNKEPNPPAVPSTTSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPS+S SSQSNRNP+LSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSTSPSSQSNRNPQLSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPG+SIENPM+DF++LGEE EC GNAD+RLPNCQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGYSIENPMYDFDDLGEEDECGGNADYRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVE-TEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESD 300
           V+LGKFRRMN  EAVE TEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A+ E D
Sbjct: 241 VRLGKFRRMNAVEAVETTEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGD 300

Query: 301 HKQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQ--IGM 360
           +KQP KGT+   I    ADLDGKKLNSVAKGESYSVSKIWLWSKKGK+ SSTEP   IGM
Sbjct: 301 NKQPCKGTDSNSISPVQADLDGKKLNSVAKGESYSVSKIWLWSKKGKYSSSTEPSQPIGM 360

Query: 361 DSSLNTDLPWLRQTQGPS 372
           DSSLNTDLPWLRQTQGPS
Sbjct: 361 DSSLNTDLPWLRQTQGPS 378

[Close]

BLAST of Carg04421 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.8e-117
Identity = 234/386 (60.62%), Postives = 282/386 (73.06%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEP--TPPAPPSATSSGTRISPAVLF 60
           M+ +R  I QKDG  +YPPP            + K+P  +PP+PP   SSG RISPAVLF
Sbjct: 1   MSWVRFTIEQKDGNFAYPPP------------FYKDPILSPPSPP-PPSSGNRISPAVLF 60

Query: 61  IIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSG 120
           +IVILAVLFFISGLLHLLVRFLIKHPS++ASS+SNR PE+S SDALQRQLQQLFHL+DSG
Sbjct: 61  VIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSG 120

Query: 121 LDQAFIDALPVFKYKEIVG----------LKEPFDCAVCLCEYSEKDQLRLLPMCSHAFH 180
           LDQAFIDALPVF YKEIVG           +EPFDCAVCLCE+SEKD+LRLLPMCSHAFH
Sbjct: 121 LDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFH 180

Query: 181 VNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRME 240
           +NCIDTWL SNSTCPLCRGTLF+PGFS+ENPMFDF+++ E+ E V          QK ME
Sbjct: 181 LNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTE-----NGSQKTME 240

Query: 241 IQEVVNEKGGFPVKLGKFRRM-NIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVID 300
           IQE+V EKG  PV+LGKF+R+ N+      +V   GETSSSNLDARRC+SMGSYQY++ +
Sbjct: 241 IQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGN 300

Query: 301 AELRVPLSRAQQESDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHL 360
           +EL+VP +  +      Q  +  +    +  D KK+N+VAKGES+SVSKIWLW KK K  
Sbjct: 301 SELKVPFANDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFS 360

Query: 361 SSTEPQIGMDSSLNTD----LPWLRQ 367
           S  + ++   SSLN D    LPW+ +
Sbjct: 361 SDAQRRL-PSSSLNVDDLPKLPWMEE 367

[Close]

BLAST of Carg04421 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 5.7e-86
Identity = 191/367 (52.04%), Postives = 230/367 (62.67%), Query Frame = 0


Query: 3   RIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVI 62
           RI +   + D      P     SS+P  +  N + T  +  S++    RISP +LFIIV+
Sbjct: 5   RIHYSQLKNDNLNQISP-----SSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVL 64

Query: 63  LAVLFFISGLLHLLVRFLIKHPSSSASS---QSNRNPELSPSDALQRQLQQLFHLHDSGL 122
           L+V+FFI  +LHLLVR+ +K   S+ SS   +SN+NPE S SD  QRQLQQLFHLHDSGL
Sbjct: 65  LSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL 124

Query: 123 DQAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSN 182
           DQA IDALPVF YKEI G KEPFDCAVCLCE+SE D+LRLLP CSHAFH++CIDTWLLSN
Sbjct: 125 DQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSN 184

Query: 183 STCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGG- 242
           STCPLCRGTLF+ G   E P F+F   G  A   G    R+   QK  E     NE G  
Sbjct: 185 STCPLCRGTLFSLGHQFEYPDFNF---GFFAGDDGGGGVRVSPVQKPAE-----NEIGKR 244

Query: 243 -FPVKLGKFRRMNIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRA 302
            F V+LGKFR  NI    E  V   GETSSS+LD RRC+SMGSYQY+V +++L V L   
Sbjct: 245 VFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPN 304

Query: 303 QQESDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKK-----GKHLSSTEP 357
            +             K   D++GKK+N  +KGES+SVSKIW WS K       H S T  
Sbjct: 305 NEGL-----------KNNKDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPSETNL 347

[Close]

BLAST of Carg04421 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 4.0e-63
Identity = 168/408 (41.18%), Postives = 217/408 (53.19%), Query Frame = 0


Query: 7   QIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVILAVL 66
           Q F     L   PP+   SS+ FD+                  ++ISP++L II+IL+++
Sbjct: 19  QNFLSPSSLPQEPPLSLRSSANFDL-----------------NSKISPSILLIIIILSII 78

Query: 67  FFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDA 126
           FFISGLLHLLVRFL+        S  +R        ALQ QLQQLFHLHDSG+DQ+FID 
Sbjct: 79  FFISGLLHLLVRFLL------TPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT 138

Query: 127 LPVFKYKEIVGLKE-PFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLC 186
           LPVF YK I+GLK  PFDCAVCLCE+  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 139 LPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLC 198

Query: 187 RGTLFNPGFSIENPMFDF------------NELG---EEAEC----------------VG 246
           R +L +   S ++P   F             E+G   + A C                VG
Sbjct: 199 RSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVG 258

Query: 247 NADHRLPNCQKRMEIQEVVNEKGG-------FPVKLGKFRRMNIAEAVETEVGETSSSNL 306
           N D            Q +  E GG       F VKLGKFR ++I E   +     +SS+L
Sbjct: 259 NNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSL 318

Query: 307 DARRCYSMGSYQYVV-IDAELRVPLSRAQQES------DHKQPFK--GTEPKGIADLDGK 358
           D RRC+SMGSY+Y++  +  L+V +S  +Q S       H+      G +P G     G 
Sbjct: 319 DERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGS 378

[Close]

BLAST of Carg04421 vs. ExPASy Swiss-Prot
Match: Q9ZV53 (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.8e-55
Identity = 147/363 (40.50%), Postives = 203/363 (55.92%), Query Frame = 0


Query: 23  PSSSSPFDVIYNKEPTPPAPPSATSS----GTRISPAVLFIIVILAVLFFISGLLHLLVR 82
           P   S  ++I +  P P  P  + +S     ++I+P +L II+IL+++FFISGLLH+LV+
Sbjct: 6   PEMKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVK 65

Query: 83  FLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEIVGL 142
           FL+        S+ +R        ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGL
Sbjct: 66  FLL------TPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGL 125

Query: 143 K-EPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIE 202
           K  PFDC VCLCE+  +D+LRLLP CSHAFHV CIDTWLLS+STCPLCR  L + GFS  
Sbjct: 126 KISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSH 185

Query: 203 N--------------------PMFDFN-----ELGEEAECVGNADHRLPNCQKRMEIQEV 262
           +                    P+ + N     ++  ++E       R  +C    ++  +
Sbjct: 186 HNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGR-KSCDPDGDMDGL 245

Query: 263 VNEKGGFPVKLGKFRRM-NIAEAVETEVGETS--SSNLDARRCYSMGSYQYVV-IDAELR 322
             +     VKLGKFR + ++ E  + +    S  S N+D RRC SMGSY+Y++  +A L+
Sbjct: 246 DEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLK 305

Query: 323 VPLSRAQQESDHKQPFK-------GTEP--KGIADLDGKKLNSVAKGESYSVSKIWLWSK 343
           V +S  +     + P         G +P  KGI         SV + ES+S+SKIWL  K
Sbjct: 306 VHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIE-------KSVVERESFSLSKIWLRGK 353

[Close]

BLAST of Carg04421 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 2.8e-40
Identity = 112/280 (40.00%), Postives = 160/280 (57.14%), Query Frame = 0


Query: 22  PPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLI 81
           P SSS+    + N++      PS++S    I   +  +I  LA++    G+L+L+ +FL 
Sbjct: 95  PKSSSAATLTLMNQK-----DPSSSS----IVSVLCLVISGLALIIVFLGVLYLIFKFLR 154

Query: 82  KHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEI-VGLKE 141
           K  +       N NP+L    +   QLQ LF LHDSGLDQ  IDALPVF Y  + + L++
Sbjct: 155 KSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQ 214

Query: 142 PFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPM 201
           PFDCAVCL E+S+ D+LRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L     S  N  
Sbjct: 215 PFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL-----STSNVC 274

Query: 202 FDFNE-LGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFPVKLGKFRRMNIAEAVETEV 261
           ++ +E L          D    +  KR+           F V+LG+F+  N +++   +V
Sbjct: 275 YNHSETLVAPLSGHQQVDDGKASLAKRV-----------FSVRLGRFKSTNESQSQRHDV 334

Query: 262 GETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESD 300
            +     +  RRCYSMG+ QY+V D +  V LS + +E +
Sbjct: 335 KDEIGVRM-PRRCYSMGTQQYLVCDQDFVVALSSSPREGN 346

[Close]

BLAST of Carg04421 vs. ExPASy TrEMBL
Match: A0A6J1E6P3 (RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111431288 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.1e-212
Identity = 370/371 (99.73%), Postives = 370/371 (99.73%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQE DH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD
Sbjct: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 372
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 371

[Close]

BLAST of Carg04421 vs. ExPASy TrEMBL
Match: A0A6J1JPA3 (RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111487667 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 1.8e-207
Identity = 365/371 (98.38%), Postives = 366/371 (98.65%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPA PSATSSGTRISPAVLFII
Sbjct: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAAPSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF+ELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQE DH
Sbjct: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQEGDH 300

Query: 301 KQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSSLNTD 360
           KQPFKGT  KGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSST PQIGMDSSLNTD
Sbjct: 301 KQPFKGT-AKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTLPQIGMDSSLNTD 360

Query: 361 LPWLRQTQGPS 372
           LPWLRQTQGPS
Sbjct: 361 LPWLRQTQGPS 370

[Close]

BLAST of Carg04421 vs. ExPASy TrEMBL
Match: A0A5A7T7E5 (RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00820 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 7.5e-182
Identity = 325/375 (86.67%), Postives = 342/375 (91.20%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           M RIRHQIFQ DGF SYPPP+  SSS+PFD IYNKEP PPA PS +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPM+DF++LGEE EC GNA+HRLPNCQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           V+LGKFRRM+ AE VETEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A+ E D+
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSS 360
           KQP K  E   I    ADLDGKKL+SVAKGESYSVSKIWLWSKKGK   STEPQIGM SS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 371
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Carg04421 vs. ExPASy TrEMBL
Match: A0A1S3C9T4 (RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103498060 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 7.5e-182
Identity = 325/375 (86.67%), Postives = 342/375 (91.20%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           M RIRHQIFQ DGF SYPPP+  SSS+PFD IYNKEP PPA PS +SSGTRISPAVLFII
Sbjct: 1   MARIRHQIFQNDGFFSYPPPLAASSSTPFDGIYNKEPNPPAVPSPSSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFHVNCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPM+DF++LGEE EC GNA+HRLPNCQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMYDFDDLGEEDECAGNAEHRLPNCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           V+LGKFRRM+ AE VETEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A+ E D+
Sbjct: 241 VRLGKFRRMDAAEVVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARGEGDN 300

Query: 301 KQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSS 360
           KQP K  E   I    ADLDGKKL+SVAKGESYSVSKIWLWSKKGK   STEPQIGM SS
Sbjct: 301 KQPSKEAESNSISPVQADLDGKKLSSVAKGESYSVSKIWLWSKKGKFSGSTEPQIGMPSS 360

Query: 361 LNTDL-PWLRQTQGP 371
           LNTDL PWLRQTQGP
Sbjct: 361 LNTDLPPWLRQTQGP 375

[Close]

BLAST of Carg04421 vs. ExPASy TrEMBL
Match: A0A6J1C1A7 (RING-H2 finger protein ATL46 OS=Momordica charantia OX=3673 GN=LOC111006517 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 9.8e-182
Identity = 326/374 (87.17%), Postives = 339/374 (90.64%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFII 60
           M  IRHQIFQKDGFLSYPPPM  SSSSPF   YNKEPTPPA  SATSSGTRISPAVLFII
Sbjct: 1   MAPIRHQIFQKDGFLSYPPPMADSSSSPFVGTYNKEPTPPASSSATSSGTRISPAVLFII 60

Query: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120
           VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD
Sbjct: 61  VILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLD 120

Query: 121 QAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNS 180
           QAFIDALPVF+YKEIVGLKEPFDCAVCLCE+SEKDQLRLLPMCSHAFH+NCIDTWLLSNS
Sbjct: 121 QAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDQLRLLPMCSHAFHINCIDTWLLSNS 180

Query: 181 TCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFP 240
           TCPLCRGTLFNPGFSIENPMFDF++LG+E EC GNAD R P CQK MEIQEVVNEKG FP
Sbjct: 181 TCPLCRGTLFNPGFSIENPMFDFDDLGDEDECSGNADRRFPTCQKTMEIQEVVNEKGVFP 240

Query: 241 VKLGKFRRMNIAEAVETEVGETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESDH 300
           V+LGKFRRMN AE VETEVGETSSSNLDARRCYSMGSYQYVVIDA+LR+ LS+A++E D+
Sbjct: 241 VRLGKFRRMNPAEPVETEVGETSSSNLDARRCYSMGSYQYVVIDADLRIALSKARREGDN 300

Query: 301 KQPFKGTEPKGI----ADLDGKKLNSVAKGESYSVSKIWLWSKKGKHLSSTEPQIGMDSS 360
           KQ  K  EP  I    ADLDGKKLNSV KGESYSVSKIWLWSKKGK  SSTEPQIGM SS
Sbjct: 301 KQLSKDXEPNSISPVQADLDGKKLNSVVKGESYSVSKIWLWSKKGKFASSTEPQIGMPSS 360

Query: 361 LNTDLPWLRQTQGP 371
           LN DLPWLRQTQGP
Sbjct: 361 LNMDLPWLRQTQGP 374

[Close]

BLAST of Carg04421 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 423.3 bits (1087), Expect = 2.0e-118
Identity = 234/386 (60.62%), Postives = 282/386 (73.06%), Query Frame = 0


Query: 1   MTRIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEP--TPPAPPSATSSGTRISPAVLF 60
           M+ +R  I QKDG  +YPPP            + K+P  +PP+PP   SSG RISPAVLF
Sbjct: 1   MSWVRFTIEQKDGNFAYPPP------------FYKDPILSPPSPP-PPSSGNRISPAVLF 60

Query: 61  IIVILAVLFFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSG 120
           +IVILAVLFFISGLLHLLVRFLIKHPS++ASS+SNR PE+S SDALQRQLQQLFHL+DSG
Sbjct: 61  VIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQLFHLNDSG 120

Query: 121 LDQAFIDALPVFKYKEIVG----------LKEPFDCAVCLCEYSEKDQLRLLPMCSHAFH 180
           LDQAFIDALPVF YKEIVG           +EPFDCAVCLCE+SEKD+LRLLPMCSHAFH
Sbjct: 121 LDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFH 180

Query: 181 VNCIDTWLLSNSTCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRME 240
           +NCIDTWL SNSTCPLCRGTLF+PGFS+ENPMFDF+++ E+ E V          QK ME
Sbjct: 181 LNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTE-----NGSQKTME 240

Query: 241 IQEVVNEKGGFPVKLGKFRRM-NIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVID 300
           IQE+V EKG  PV+LGKF+R+ N+      +V   GETSSSNLDARRC+SMGSYQY++ +
Sbjct: 241 IQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILGN 300

Query: 301 AELRVPLSRAQQESDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKKGKHL 360
           +EL+VP +  +      Q  +  +    +  D KK+N+VAKGES+SVSKIWLW KK K  
Sbjct: 301 SELKVPFANDRLPRLKPQDKESEQTGNSSSEDNKKINTVAKGESFSVSKIWLWPKKDKFS 360

Query: 361 SSTEPQIGMDSSLNTD----LPWLRQ 367
           S  + ++   SSLN D    LPW+ +
Sbjct: 361 SDAQRRL-PSSSLNVDDLPKLPWMEE 367

[Close]

BLAST of Carg04421 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 319.3 bits (817), Expect = 4.0e-87
Identity = 191/367 (52.04%), Postives = 230/367 (62.67%), Query Frame = 0


Query: 3   RIRHQIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVI 62
           RI +   + D      P     SS+P  +  N + T  +  S++    RISP +LFIIV+
Sbjct: 5   RIHYSQLKNDNLNQISP-----SSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVL 64

Query: 63  LAVLFFISGLLHLLVRFLIKHPSSSASS---QSNRNPELSPSDALQRQLQQLFHLHDSGL 122
           L+V+FFI  +LHLLVR+ +K   S+ SS   +SN+NPE S SD  QRQLQQLFHLHDSGL
Sbjct: 65  LSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL 124

Query: 123 DQAFIDALPVFKYKEIVGLKEPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSN 182
           DQA IDALPVF YKEI G KEPFDCAVCLCE+SE D+LRLLP CSHAFH++CIDTWLLSN
Sbjct: 125 DQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSN 184

Query: 183 STCPLCRGTLFNPGFSIENPMFDFNELGEEAECVGNADHRLPNCQKRMEIQEVVNEKGG- 242
           STCPLCRGTLF+ G   E P F+F   G  A   G    R+   QK  E     NE G  
Sbjct: 185 STCPLCRGTLFSLGHQFEYPDFNF---GFFAGDDGGGGVRVSPVQKPAE-----NEIGKR 244

Query: 243 -FPVKLGKFRRMNIAEAVETEV---GETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRA 302
            F V+LGKFR  NI    E  V   GETSSS+LD RRC+SMGSYQY+V +++L V L   
Sbjct: 245 VFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYIVAESDLVVALCPN 304

Query: 303 QQESDHKQPFKGTEPKGIADLDGKKLNSVAKGESYSVSKIWLWSKK-----GKHLSSTEP 357
            +             K   D++GKK+N  +KGES+SVSKIW WS K       H S T  
Sbjct: 305 NEGL-----------KNNKDVEGKKINMRSKGESFSVSKIWQWSNKRSKFPNNHPSETNL 347

[Close]

BLAST of Carg04421 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 243.4 bits (620), Expect = 2.8e-64
Identity = 168/408 (41.18%), Postives = 217/408 (53.19%), Query Frame = 0


Query: 7   QIFQKDGFLSYPPPMPPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVILAVL 66
           Q F     L   PP+   SS+ FD+                  ++ISP++L II+IL+++
Sbjct: 19  QNFLSPSSLPQEPPLSLRSSANFDL-----------------NSKISPSILLIIIILSII 78

Query: 67  FFISGLLHLLVRFLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDA 126
           FFISGLLHLLVRFL+        S  +R        ALQ QLQQLFHLHDSG+DQ+FID 
Sbjct: 79  FFISGLLHLLVRFLL------TPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT 138

Query: 127 LPVFKYKEIVGLKE-PFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLC 186
           LPVF YK I+GLK  PFDCAVCLCE+  +D+LRLLP CSHAFH++CIDTWLLS+STCPLC
Sbjct: 139 LPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLC 198

Query: 187 RGTLFNPGFSIENPMFDF------------NELG---EEAEC----------------VG 246
           R +L +   S ++P   F             E+G   + A C                VG
Sbjct: 199 RSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVG 258

Query: 247 NADHRLPNCQKRMEIQEVVNEKGG-------FPVKLGKFRRMNIAEAVETEVGETSSSNL 306
           N D            Q +  E GG       F VKLGKFR ++I E   +     +SS+L
Sbjct: 259 NNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSL 318

Query: 307 DARRCYSMGSYQYVV-IDAELRVPLSRAQQES------DHKQPFK--GTEPKGIADLDGK 358
           D RRC+SMGSY+Y++  +  L+V +S  +Q S       H+      G +P G     G 
Sbjct: 319 DERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKNRGLPGHRTAMSECGFDPTGRLKFSGS 378

[Close]

BLAST of Carg04421 vs. TAIR 10
Match: AT2G18650.1 (RING/U-box superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 4.8e-56
Identity = 147/363 (40.50%), Postives = 203/363 (55.92%), Query Frame = 0


Query: 23  PSSSSPFDVIYNKEPTPPAPPSATSS----GTRISPAVLFIIVILAVLFFISGLLHLLVR 82
           P   S  ++I +  P P  P  + +S     ++I+P +L II+IL+++FFISGLLH+LV+
Sbjct: 6   PEMKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVK 65

Query: 83  FLIKHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEIVGL 142
           FL+        S+ +R        ALQ QLQQLF+LHDSG+DQ+ ID LPVF YK IVGL
Sbjct: 66  FLL------TPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGL 125

Query: 143 K-EPFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIE 202
           K  PFDC VCLCE+  +D+LRLLP CSHAFHV CIDTWLLS+STCPLCR  L + GFS  
Sbjct: 126 KISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLS-GFSSH 185

Query: 203 N--------------------PMFDFN-----ELGEEAECVGNADHRLPNCQKRMEIQEV 262
           +                    P+ + N     ++  ++E       R  +C    ++  +
Sbjct: 186 HNLSSSYLLVLESEQSSRDMVPVLESNSQLGYDVNNDSESTRIRSGR-KSCDPDGDMDGL 245

Query: 263 VNEKGGFPVKLGKFRRM-NIAEAVETEVGETS--SSNLDARRCYSMGSYQYVV-IDAELR 322
             +     VKLGKFR + ++ E  + +    S  S N+D RRC SMGSY+Y++  +A L+
Sbjct: 246 DEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLK 305

Query: 323 VPLSRAQQESDHKQPFK-------GTEP--KGIADLDGKKLNSVAKGESYSVSKIWLWSK 343
           V +S  +     + P         G +P  KGI         SV + ES+S+SKIWL  K
Sbjct: 306 VHVSTKKLSGKDRVPSHRTVMSECGFDPTVKGIE-------KSVVERESFSLSKIWLRGK 353

[Close]

BLAST of Carg04421 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 167.5 bits (423), Expect = 2.0e-41
Identity = 112/280 (40.00%), Postives = 160/280 (57.14%), Query Frame = 0


Query: 22  PPSSSSPFDVIYNKEPTPPAPPSATSSGTRISPAVLFIIVILAVLFFISGLLHLLVRFLI 81
           P SSS+    + N++      PS++S    I   +  +I  LA++    G+L+L+ +FL 
Sbjct: 95  PKSSSAATLTLMNQK-----DPSSSS----IVSVLCLVISGLALIIVFLGVLYLIFKFLR 154

Query: 82  KHPSSSASSQSNRNPELSPSDALQRQLQQLFHLHDSGLDQAFIDALPVFKYKEI-VGLKE 141
           K  +       N NP+L    +   QLQ LF LHDSGLDQ  IDALPVF Y  + + L++
Sbjct: 155 KSSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQ 214

Query: 142 PFDCAVCLCEYSEKDQLRLLPMCSHAFHVNCIDTWLLSNSTCPLCRGTLFNPGFSIENPM 201
           PFDCAVCL E+S+ D+LRLLP+CSHAFH++CIDTWLLSNSTCPLCR +L     S  N  
Sbjct: 215 PFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL-----STSNVC 274

Query: 202 FDFNE-LGEEAECVGNADHRLPNCQKRMEIQEVVNEKGGFPVKLGKFRRMNIAEAVETEV 261
           ++ +E L          D    +  KR+           F V+LG+F+  N +++   +V
Sbjct: 275 YNHSETLVAPLSGHQQVDDGKASLAKRV-----------FSVRLGRFKSTNESQSQRHDV 334

Query: 262 GETSSSNLDARRCYSMGSYQYVVIDAELRVPLSRAQQESD 300
            +     +  RRCYSMG+ QY+V D +  V LS + +E +
Sbjct: 335 KDEIGVRM-PRRCYSMGTQQYLVCDQDFVVALSSSPREGN 346

The following BLAST results are available for this feature:

BLAST of Carg04421 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602449.1	7.6e-213	100.00	RING-H2 finger protein ATL46, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022923642.1	2.2e-212	99.73	RING-H2 finger protein ATL46-like [Cucurbita moschata]	[more]
XP_023552085.1	1.6e-210	98.92	RING-H2 finger protein ATL46-like [Cucurbita pepo subsp. pepo]	[more]
XP_022990921.1	3.7e-207	98.38	RING-H2 finger protein ATL46-like [Cucurbita maxima]	[more]
XP_023550828.1	9.1e-182	86.51	RING-H2 finger protein ATL46-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg04421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL07	2.8e-117	60.62	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q8GW38	5.7e-86	52.04	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q940Q4	4.0e-63	41.18	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9ZV53	6.8e-55	40.50	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P...	[more]
Q7X843	2.8e-40	40.00	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of Carg04421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6P3	1.1e-212	99.73	RING-H2 finger protein ATL46-like OS=Cucurbita moschata OX=3662 GN=LOC111431288 ...	[more]
A0A6J1JPA3	1.8e-207	98.38	RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111487667 PE...	[more]
A0A5A7T7E5	7.5e-182	86.67	RING-H2 finger protein ATL46 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C9T4	7.5e-182	86.67	RING-H2 finger protein ATL46 OS=Cucumis melo OX=3656 GN=LOC103498060 PE=4 SV=1	[more]
A0A6J1C1A7	9.8e-182	87.17	RING-H2 finger protein ATL46 OS=Momordica charantia OX=3673 GN=LOC111006517 PE=4...	[more]

BLAST of Carg04421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40250.1	2.0e-118	60.62	RING/U-box superfamily protein	[more]
AT1G23980.1	4.0e-87	52.04	RING/U-box superfamily protein	[more]
AT4G30400.1	2.8e-64	41.18	RING/U-box superfamily protein	[more]
AT2G18650.1	4.8e-56	40.50	RING/U-box superfamily protein	[more]
AT3G48030.1	2.0e-41	40.00	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 144..185 e-value: 1.4E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 143..186 e-value: 1.2E-12 score: 48.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 144..186 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 119..191 e-value: 2.1E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..315
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 9..355
None	No IPR available	PANTHER	PTHR45768:SF36	RING-H2 FINGER PROTEIN ATL46-LIKE ISOFORM X1	coord: 9..355
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 143..186 e-value: 3.82216E-19 score: 78.1125
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 123..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04421-RA	Carg04421-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding