Carg04132 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04132
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr19: 7828794 .. 7829634 (+)
RNA-Seq ExpressionCarg04132
SyntenyCarg04132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCAAGATGAACTGATCATCATTTTTTTACCATCTCAAACAGTTCCACGATTTCTCTCTGTTGTTCTTCTTTTTGCTACCGTTTTCGATCGTACCTTCTCTGTTTCCGTTCGTTCTCGAAGATCGAAGGCATTGAAGTAAGTTTCTGGTCGCTCCTTTTCGTGCTTCGTTTCTTTCTGAAGAAATGTTCACTTTCCATTAATGTGTTTTGTTATGTGGTTTCTGAATTTGGTAAAGGCGGAATCGATTTTATGGCCATTTCAGATTCTTCATTTCTGCTCATTTCATTGGTCGATTGTGAACTTTTGCCTTCAGTGGATTATTGTCTGTTATTCTGGTTGTTGATGATGATGGAGGGTTTCCATTTTCACTGAAATTGGGGTGTTTTGAATTCTTTAGGAGTGCTTTGTGGAATGTTATGAAGATTTTTGTTCTTGGATTTTTTAGATTGTTGAAATTTCTCCATGTCGTTCACTATCACTATAACTATGAAGATTTTGAAATTGGAACTTCAGCTGTAGGGTTTATTGTTACAGAAATCCGTTCTTGAATGGTAGCTTTCGACCTGTGGATCATGATTCATGTAATTTCATATGATTTAATGGAACAAAACGAATCCTCTTCTGTTTTTCTTCAGATTCTGCCTTTAGGGATCTCTATTTCTTCGTCTAGTTCATTTTTTGGTTGTTGAATTTTCATTAATCAGTTGCGTAGTTCTTTTTCATTCCCGGTGATTTATTCCTGAAATTTGTTCTTCATTACGTGATAGTGAAAGGTTCTTAGTTATTTGGTAACTTGTTTCAGGTCTGATATGAAGAAAGGCTTGCTTGCAACCTCTTAA

mRNA sequence

AATCAAGATGAACTGATCATCATTTTTTTACCATCTCAAACAGTTCCACGATTTCTCTCTGTTGTTCTTCTTTTTGCTACCGTTTTCGATCGTACCTTCTCTGTTTCCGTTCGTTCTCGAAGATCGAAGGCATTGAAGTCTGATATGAAGAAAGGCTTGCTTGCAACCTCTTAA

Coding sequence (CDS)

AATCAAGATGAACTGATCATCATTTTTTTACCATCTCAAACAGTTCCACGATTTCTCTCTGTTGTTCTTCTTTTTGCTACCGTTTTCGATCGTACCTTCTCTGTTTCCGTTCGTTCTCGAAGATCGAAGGCATTGAAGTCTGATATGAAGAAAGGCTTGCTTGCAACCTCTTAA

Protein sequence

NQDELIIIFLPSQTVPRFLSVVLLFATVFDRTFSVSVRSRRSKALKSDMKKGLLATS
Homology
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BLAST of Carg04132 vs. NCBI nr
Match: KAG7011848.1 (hypothetical protein SDJN02_26754, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.1 bits (261), Expect = 2.0e-19
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  NQDELIIIFLPSQTVPRFLSVVLLFATVFDRTFSVSVRSRRSKALKSDMKKGLLATS 58
          NQDELIIIFLPSQTVPRFLSVVLLFATVFDRTFSVSVRSRRSKALKSDMKKGLLATS
Sbjct: 1  NQDELIIIFLPSQTVPRFLSVVLLFATVFDRTFSVSVRSRRSKALKSDMKKGLLATS 57

The following BLAST results are available for this feature:
BLAST of Carg04132 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7011848.12.0e-19100.00hypothetical protein SDJN02_26754, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg04132 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg04132 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg04132 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04132-RACarg04132-RAmRNA