Carg03951 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03951
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Poly(A)-specific ribonuclease
Location	Carg_Chr12: 2166845 .. 2171918 (-)
RNA-Seq Expression	Carg03951
Synteny	Carg03951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGATGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAGCGTACTACTAGAACTAATTGAAGAGAATTACCAAGTATTTGTAGAAGTGTGAGTCTGTTAGTTACTTTTGTACAATTTGGCTAAAGCATTGATGATTGTAACTATTTCCCGCTTTCCTGCTCTGTAATAGAAACCTTCGACTGTTTTTTGCAGCTTGTGGTTTCTTGTAAATTATGGCAGTTTAGTGTTTCAATAAAATCTTAATGACGTTTCTTTGTTGAGTCTTCACCTGTTTCCATTGTCGAATCAGACTTGAATCTGATAGGATCCATCAGGCTGTCATAATAGACACAATTTTGGTTTCTGGGTTTGATTGTTCTGTTCTTGATTGTCTTGTTGTAGAACATTTGCAGCCTGTTCATCCGTGTGTTTTGAGGTATCCCTGTAGCTAACGTTTCTGATTGCTGGTATTGTTGCAGAGTTTAGAGGTATGCATGGAATAACATTGGTTCATTTTCTTTTTGGACTTTATTCAGGCACGAAACCAAGACGAATCTCGGGCTCGGATAATCTACAGGACGTTGATTGATCTGTAGGTGTTACCACCAACAGGGCTGACCCATGTTATCAATGCATAGCTAGATCGAATCCTCGGCACATCGGGTTAGGCATCGTTTAATCTATAGTTTGAAAATTTCCATTCATAGCCACACCTGATCAGATTCATTTCATTTTCTGCAATTCTGAAGAGACATGGAACCTTGTTTTAGTTTGCACATACTCAATAATGTTAATCAGTTTTGAGATCTGAGAAAATATACATCCAAACCTGTTCATACTTGTTCTATCTGATATTTACTGACAACCTGAGCCTAAGCAGCTAGTTAATTGACCTGAAAAGGGCTACTGAAAAGGTCTTGATTCGTTGTTTAATCTCTTGTTACCTGCAATTCTGAGGTGTAATAGATGTTTAATTTCACCTTCCCAAAAGGGATTTGGATTTGGATTTGGATCTGATATTGTGTATGTTATTGGTAATTGTTGTTGGATCCACATTTTATGGTGATATTATTATGGCATGTTGGGTGGCTTCCTATCCTGAAAATAATTGTACCTAATCCTTTGTTAGAGGGAGAGAGACAGGCCCTGGAATGGGCATTAATCATATGTCCATAGAATAAGATCTGAAGAACAGCATTTATATCCATTGATCTCCACGAATTTTCACTTAGATCGGCAGCCTACGCAGATCTAACATGTTTTCATATACATGAGATGATTTAGAAACAGATAAAAGGCATGACACGAGATGTAAAAGCCCATGTCTACCGCTAGTAGATATTGTCCATTACGCATTGTTGTTGGTCTCACGGTTTTAAAATGCCTCTACTAGAGAGAGGTTTCCACGCCCTTATAAGGAATATTCCGTCCCCCTCTCCAACCAATGTGAGATTTCACAATCCACCCCTATGAGACCTAGCATCCTCATTAGCACACCACTCGGTGCCTAGCTCCGATACCATTTATAACAATCCAGTCGACCACTAGTAAATATTGTTTTTATGCTATAGCCTCACAGTTTAAAACGTGTTTACTAGGGAGAGATTTCTACCTCCTTATAAGGAATGTTTCGTTCCCAGTTTAAAACATGTCTACTAGGGAGAGATTTCTACACTCTTATAAGGAGGAATGTTTCGTTCCCAGTTTAAAACATGTCTACTAGGGAGAGATTTCTACACTCTTATAAGGAGGAATGCTTCGTTCCCAGTTTAAAACATGTCTACTAGGGAGAGATTTCTACCACCCGAACATCATTCTAAAATCTCTATTTCAATACCATAAAAGGGTAAGTATCTAGATTCATTGGTTCCTCCCATCAAACAAGTCAAACAAGCATGGTACGACCATTCGAATTACTTTGAAACAATCTTACTTTAGGATTTTATTTATTTTTTCTTTCTAAAAGAAATATTGGGACCTTTTTTTTTTCTTGAAGAAATAAAATAGTCTAAAAAAAGTAAAAAACTTGTGATTTTCAAACAGTTATTATTAACTTTATTGGCATGGTTGATTTAAAGTTCCCACTTTTATTTAAAATTTAAATTCATTTACTTTTTTACTTTTACTTTAATGAATAACATTTGGGTAATAAATTATGTATTTAAAAACCAAAAAAGTCAAATATTGTCAATAAATACAACGAGTAATTATTATGAATTTATGATTACAAAACATACTAATTACCATTATAAAAAATATATATTTACAGTCACTTATTTAATTGATATATATATATATATATATATATATGTTTATAAATAAAATAATTATGAATATGAATCTACCATTAAAATTTTTCATTAAATAATAAATATAACCTTTTCAATATGGGCTTGGTGGATCGACATGAATTATGGGCTTGGACTTATCATGAAGCCCATAATTAACGTGTGCAAAGCCCAATCTCATTTATGGGCTTTGAATATAACAATTAAATATATATATTTTTCAAATATTAGAAAATAATTGATACGTTGCGATCAAGCTGTCTCCCTCGCAATTTATAAAATAATTTTAAGACCACACAAAATTTTAAATAATTTATGAAAAAACAAAATATTTTTAATTACAATTATATATATATATATATATATATTAATTGGATCATTAATCATTTTAAAAAAAATAAATTATAACAACAAATTTTAATTAGGTTTTTGAGGCTACCGTTCTTGCTGCCAGGTTGAGACACTGATCGGTATCAAGCTCTGATACAATTTGTAACAATTCAAGTTCACCGCTAAAAGATATTGTTTATTTTAATCTATTAATTTTAAAAATGCATTTGTTAGGGAGAGATTTTCACGCCTTTATAAAAAAAAAATGTTTTGAATAAAAATAAAATAATTTGAAAAAGGAGAGAAAAAGACAAAATTGATAAAACAATGAAACGACGGCGTTTAGAATGTAAACGTACAATCATTCCCTTTCATTCCTCATCCCGATGAGAGGAAGCAAATTTTAGGGAGGGTGTAAGCCGAGCTTTGTGTGCTCCTTTGCCTCTCCTTCCTAAACCTACACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGCGAAGCTCAAAAATCACTACTTCCCTGCTTCAAGATCTCTCTGTACCACCATTCAATTTTAGGTTTTCAAGGTCAGATCCGCTTCCCAGTTCTCGGGGGTTTCACCCCTTTCGCACAATCGATTTTTCATCTTCTAGGGTTCTATCTTCACTCGGGATTTCTCCTTATTCCTTCACTCGCGCCTTCTCTTCTCCGAGATCCTTTAGATCTAAGGAGATTTTCCGTAACCTCCTTGTTCTGCGGCGGTGGTATTTCTGACGGCCCGCCTAGGTTTCTAGGGCCTTTTTCCGATTTTTTGTTTTTTTTTTTCCTTCAATTTTTTTTTTTCGATTACGGTGGGTTCTTCCGTTTTGCCATTTCGTTGGTTCGGTTGATATTCGAGGTATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAACGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

mRNA sequence

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGATGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAACGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGATGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACATAGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGTTGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAATGATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGGCCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTACTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTTTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAAATACGCAGGTATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACATAGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGTTGATTCAGTTGGGTCTTACGTTTTCTGATGAGAACGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAACGATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTCATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGGCTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTATTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAAATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA

Protein sequence

MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

Homology

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BLAST of Carg03951 vs. NCBI nr
Match: KAG7020412.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1112.1 bits (2875), Expect = 0.0e+00
Identity = 534/534 (100.00%), Postives = 534/534 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMD 300
           CTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMD
Sbjct: 241 CTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMD 300

Query: 301 TEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ 360
           TEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Sbjct: 301 TEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ 360

Query: 361 FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVT 420
           FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVT
Sbjct: 361 FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVT 420

Query: 421 FHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL 480
           FHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL
Sbjct: 421 FHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL 480

Query: 481 LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 535
           LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 481 LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 534

[Close]

BLAST of Carg03951 vs. NCBI nr
Match: KAG6598550.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 917.1 bits (2369), Expect = 6.8e-263
Identity = 456/644 (70.81%), Postives = 488/644 (75.78%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 77  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 136

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTD FCIWQFNFREFN ++DIFASDSIEL
Sbjct: 137 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 196

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DV WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 197 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 256

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           E Q GFF+LI +YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 257 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 316

Query: 241 CTFRKLRGTFFNGSTQKYA----------------------------------------- 300
            TFRKLR TFFNGS QKYA                                         
Sbjct: 317 STFRKLRTTFFNGSIQKYAANVSFAGMIIELNCSLYGTVLAHDIALVTLSFLILIMHETQ 376

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 377 TYLWLGNSESNERAMEIDRFLCTSDMAWSLSKLETKETEPTSGQIIRFRHSEEFSPFAQS 436

Query: 361 --------------------GMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAM 420
                               GMS  PK ESI+IREVWNHN+EEEFAL+RE+VDQFNYIAM
Sbjct: 437 LLYLRVFPFLPFLLGQLENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAM 496

Query: 421 DTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIW 480
           DTEFPGVV+RPVG FKNIN++NY+TLKDNVD L LIQLGLTFS+ENGNLPTCGTDK+CIW
Sbjct: 497 DTEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIW 556

Query: 481 QFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWV 524
           QFNFREFNI+ DI+A+DSI+LLR  GIDF+KN EEGIDV  F ELLMSSGIVLND+VYWV
Sbjct: 557 QFNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWV 616

[Close]

BLAST of Carg03951 vs. NCBI nr
Match: KAF3665364.1 (putative CCR4-associated factor 1 -like protein 7 [Capsicum annuum])

HSP 1 Score: 877.1 bits (2265), Expect = 7.8e-251
Identity = 420/597 (70.35%), Postives = 479/597 (80.23%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSIL K DSI IREVW  NLEEEFAL+REIVD++ ++AMDTEFPGVV+RP+G FKN ND+
Sbjct: 1   MSILLKTDSIHIREVWIDNLEEEFALMREIVDDYPFVAMDTEFPGVVIRPVGNFKNSNDF 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           +YQTLK NVD LKLIQLGLTFSDENGNLP CGTDK+CIWQFNFREFN   D+FA+DSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQLGLTFSDENGNLPKCGTDKYCIWQFNFREFNPNEDVFANDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQ GIDF+ NNE GID  RFGELLMSSG+VLN+ V W+TFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LRQSGIDFKMNNERGIDAIRFGELLMSSGIVLNDSVHWITFHSGYDFGYLLKLLTCQDLP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQAGFF LI +YFP+++DIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLTA
Sbjct: 181 DTQAGFFTLINVYFPIVFDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAG---------------------------------------- 300
           CTFRKL+  FF+GS +KYAG                                        
Sbjct: 241 CTFRKLKENFFSGSLEKYAGVLVFYRTRNKVIHNKVGVTSLADNAKEARVIRACEEDCAK 300

Query: 301 -----------------------MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYI 360
                                  MSIL K +SIHIREVWN N+EEEF LMREIVD F ++
Sbjct: 301 LRSDFDLRFCRFWWREDNLIGVKMSILSKTDSIHIREVWNENLEEEFVLMREIVDDFPFV 360

Query: 361 AMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFC 420
           AMDTEFPGVV+RPVG FK+IND+N+QTLKDNVD LKLIQLGLTFSDENGNLP CGTDK+C
Sbjct: 361 AMDTEFPGVVIRPVGNFKSINDFNFQTLKDNVDMLKLIQLGLTFSDENGNLPKCGTDKYC 420

Query: 421 IWQFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVY 480
           IWQFNFREFN + D+FA+DSIELLR+ GIDF+ NNE GID   FGELLMSSGIVLND V 
Sbjct: 421 IWQFNFREFNPNEDVFANDSIELLRESGIDFKMNNERGIDAIRFGELLMSSGIVLNDGVS 480

Query: 481 WVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKL 535
           WVTFHSGYDFGYLLKLL+ R+LP TQ  FF L+N+YFP+++DIKHLMKFCNS HGGLNKL
Sbjct: 481 WVTFHSGYDFGYLLKLLSGRALPDTQEGFFTLLNLYFPVIFDIKHLMKFCNSLHGGLNKL 540

[Close]

BLAST of Carg03951 vs. NCBI nr
Match: KAG7029483.1 (putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 718.8 bits (1854), Expect = 3.5e-203
Identity = 370/529 (69.94%), Postives = 408/529 (77.13%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 53  MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 112

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLK NVD LKLIQLGLTFSDENGNLPTCGTD FCIWQFNFREFN ++DIFASDSIEL
Sbjct: 113 NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 172

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DV WVTFHSGYDF      L C    
Sbjct: 173 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFE-----LNCSLYG 232

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
              A    L+ + F +L  I H  +    L G        +E++R  +C    SD    A
Sbjct: 233 TVLAHDIALVTLSFLIL--IMHETQTYLWL-GNSESNERAMEIDRF-LC---TSD---MA 292

Query: 241 CTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMD 300
            +  KL  T     T +  GMS  PK ESI+IREVWNHN+EEEFAL+RE+VDQFNYIAMD
Sbjct: 293 WSLSKLE-TKETEPTSENQGMSTFPKAESIYIREVWNHNLEEEFALIREVVDQFNYIAMD 352

Query: 301 TEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ 360
           TEFPGVV+RPVG FKNIN++NY+TLKDNVD L LIQLGLTFS+ENGNLPTCGTDK+CIWQ
Sbjct: 353 TEFPGVVLRPVGTFKNINEFNYRTLKDNVDILNLIQLGLTFSEENGNLPTCGTDKYCIWQ 412

Query: 361 FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVT 420
           FNFREFNI+ DI+A+DSI+LLR  GIDF+KN EEGIDV  F ELLMSSGIVLND+VYWVT
Sbjct: 413 FNFREFNITEDIYATDSIQLLRDSGIDFKKNKEEGIDVRRFSELLMSSGIVLNDSVYWVT 472

Query: 421 FHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL 480
           FHSGYDFGYLLKLLTC+ LP TQ                               +K+AE 
Sbjct: 473 FHSGYDFGYLLKLLTCQILPDTQE------------------------------DKVAET 532

Query: 481 LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVET 530
           LE+ER+GVCHQAGSDSLLTACTFRKLRDTFF+GSTQKYAG   G  V++
Sbjct: 533 LEIERVGVCHQAGSDSLLTACTFRKLRDTFFSGSTQKYAGTSVGKRVDS 535

[Close]

BLAST of Carg03951 vs. NCBI nr
Match: GEX24937.1 (probable CCR4-associated factor 1 homolog 7 [Tanacetum cinerariifolium])

HSP 1 Score: 681.4 bits (1757), Expect = 6.3e-192
Identity = 337/532 (63.35%), Postives = 393/532 (73.87%), Query Frame = 0


Query: 1   MSILPKGD-SIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND 60
           + +L K D +++I+EVW+ NLEEEF LIR IVD++ YIAMDTEFPGV             
Sbjct: 4   IDLLTKSDEAVEIKEVWNDNLEEEFVLIRNIVDKYPYIAMDTEFPGV------------- 63

Query: 61  YNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIE 120
                            LGLTFSDE+GNLPTCG+DK CIWQFNFREFN   DIFA+DSIE
Sbjct: 64  -----------------LGLTFSDEDGNLPTCGSDKPCIWQFNFREFNVNEDIFANDSIE 123

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRAL 180
           +L+QC IDF+KN+E GID N FGELLMS GVVLN+++ WVTFHSGYDFGYLLKLLT R L
Sbjct: 124 MLKQCRIDFKKNSEMGIDANLFGELLMSFGVVLNDNICWVTFHSGYDFGYLLKLLTRREL 183

Query: 181 PETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P++QAGFF+LIKIYF ++YDIKHLM+FCN L+                            
Sbjct: 184 PKSQAGFFDLIKIYFLIVYDIKHLMRFCNHLY---------------------------- 243

Query: 241 ACTFRKLRGTFFNGSTQKYAGMSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAM 300
                                         + IREVWN N+EEEF L+R IVD++ YIAM
Sbjct: 244 ------------------------------VEIREVWNDNLEEEFVLIRNIVDKYPYIAM 303

Query: 301 DTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIW 360
           DTEFPGVV+ P+  FKNINDYNY TLKDNVD LKLIQLGLTFSDE+GNLPTCG+DK CIW
Sbjct: 304 DTEFPGVVLIPLAQFKNINDYNYVTLKDNVDMLKLIQLGLTFSDEDGNLPTCGSDKPCIW 363

Query: 361 QFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWV 420
           QFNFREFN++ DIFA+DSIE+L+QCGIDF+KN E GID N FGELLMSSG+VLNDN+ WV
Sbjct: 364 QFNFREFNVNEDIFANDSIEMLKQCGIDFKKNCEMGIDANRFGELLMSSGVVLNDNICWV 423

Query: 421 TFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAE 480
           TF SGYDFGYLLKLLT R LP +QA FFDLI +YFP+VYDIKHLM+FCN  HGGLNKLAE
Sbjct: 424 TFXSGYDFGYLLKLLTRRELPKSQAGFFDLIKIYFPIVYDIKHLMRFCNHLHGGLNKLAE 447

Query: 481 LLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 532
           +LEVERIGVCHQAGSDSLLT+  F+KL++ +FNG+T+KYAGVLYGLGVE G+
Sbjct: 484 ILEVERIGVCHQAGSDSLLTSHAFKKLKEGYFNGNTEKYAGVLYGLGVEDGE 447

[Close]

BLAST of Carg03951 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 1.6e-121
Identity = 202/272 (74.26%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISNDIFASDSIE 380
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 381 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 440
           LLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 441 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 500
           P TQ  FF++I++YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 501 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 532
           +CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Carg03951 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.7e-120
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 532
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Carg03951 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 9.6e-119
Identity = 201/268 (75.00%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 266 KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTL 325
           K +SI IREVW++N+ EEFAL+REIVD+F+YIAMDTEFPGVV++PV  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 326 KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCG 385
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 386 IDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAA 445
           IDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 446 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 505
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 506 LRDTFFNGSTQKYAGVLYGLGVETGQTT 534
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of Carg03951 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 7.4e-95
Identity = 164/264 (62.12%), Postives = 204/264 (77.27%), Query Frame = 0


Query: 268 ESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNIN------DYN 327
           ++I IREVWNHN+E+E AL+ + +D F Y+AMDTEFPG+V + V A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 328 YQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELL 387
           Y TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ +D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 388 RQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPG 447
           R+  ID +KNNE G+D   F ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 448 TQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 507
             + FFD +  +FP+VYDIK+LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 508 TFRKLRDTFFNGSTQKYAGVLYGL 526
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of Carg03951 vs. ExPASy Swiss-Prot
Match: Q9UFF9 (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens OX=9606 GN=CNOT8 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 7.4e-79
Identity = 144/265 (54.34%), Postives = 190/265 (71.70%), Query Frame = 0


Query: 272 IREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDT 331
           I EVW  N+EEE   +REIV  ++YIAMDTEFPGVVVRP+G F++  DY YQ L+ NVD 
Sbjct: 12  ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71

Query: 332 LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCGIDFQKN 391
           LK+IQLGLTF++E G  P+        WQFNF+ FN++ D+++ DSI+LL   G+ FQK+
Sbjct: 72  LKIIQLGLTFTNEKGEYPS----GINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKH 131

Query: 392 NEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLIN 451
            EEGID  HF ELLM+SG+VL DNV W++FHSGYDFGY++KLLT   LP  +  FF ++N
Sbjct: 132 EEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILN 191

Query: 452 MYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFF 511
           ++FP +YD+K+LMK C +  GGL ++A+ L+++RIG  HQAGSDSLLT   F ++++ FF
Sbjct: 192 LFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFF 251

Query: 512 NGSTQ--KYAGVLYGLGVETGQTTN 535
             S    KY G LYGLG    Q  N
Sbjct: 252 EDSIDDAKYCGRLYGLGTGVAQKQN 271

[Close]

BLAST of Carg03951 vs. ExPASy TrEMBL
Match: A0A6J1KLE0 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 3.1e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 535
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Carg03951 vs. ExPASy TrEMBL
Match: A0A6J1GJJ8 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454439 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 3.1e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
           GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 535
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 274

[Close]

BLAST of Carg03951 vs. ExPASy TrEMBL
Match: A0A6J1KTM7 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496297 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 2.9e-150
Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAGM 262
           CTFRKLRGTFFNGSTQKYAG+
Sbjct: 241 CTFRKLRGTFFNGSTQKYAGV 261

[Close]

BLAST of Carg03951 vs. ExPASy TrEMBL
Match: A0A6J1GI81 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454440 PE=3 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 2.9e-150
Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120
           NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL
Sbjct: 61  NYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTINDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALP 180

Query: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRGTFFNGSTQKYAGM 262
           CTFRKLRGTFFNGSTQKYAG+
Sbjct: 241 CTFRKLRGTFFNGSTQKYAGV 261

[Close]

BLAST of Carg03951 vs. ExPASy TrEMBL
Match: A0A6J1BRI8 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 6.4e-150
Identity = 257/274 (93.80%), Postives = 264/274 (96.35%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           NYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIS DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           LRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
            TQA FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN 535
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQSIN 274

[Close]

BLAST of Carg03951 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 438.0 bits (1125), Expect = 1.1e-122
Identity = 202/272 (74.26%), Postives = 237/272 (87.13%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNISNDIFASDSIE 380
           +Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ +DI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 381 LLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSL 440
           LLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 441 PGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 500
           P TQ  FF++I++YFP VYDIKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 501 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 532
           +CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Carg03951 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-121
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 532
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Carg03951 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 434.5 bits (1116), Expect = 1.2e-121
Identity = 200/271 (73.80%), Postives = 233/271 (85.98%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 532
           CTFRKL++ FF G   KY+GVLYGLGVE GQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Carg03951 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.8e-120
Identity = 198/268 (73.88%), Postives = 231/268 (86.19%), Query Frame = 0


Query: 261 MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 320
           MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 321 NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 380
           +Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ +DIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 381 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 440
           L+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 441 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 500
            +Q  FF LIN+YFP VYDIKHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 501 CTFRKLRDTFFNGSTQKYAGVLYGLGVE 529
           CTFRKL++ FF G   KY+GVLYGLGVE
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVE 268

[Close]

BLAST of Carg03951 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 428.7 bits (1101), Expect = 6.8e-120
Identity = 201/268 (75.00%), Postives = 232/268 (86.57%), Query Frame = 0


Query: 266 KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTL 325
           K +SI IREVW++N+ EEFAL+REIVD+F+YIAMDTEFPGVV++PV  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 326 KDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIELLRQCG 385
           K+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 386 IDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAA 445
           IDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 446 FFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 505
           FF L+ +YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 506 LRDTFFNGSTQKYAGVLYGLGVETGQTT 534
           L++ +F GST+KY GVLYGLGVE G TT
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

The following BLAST results are available for this feature:

BLAST of Carg03951 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020412.1	0.0e+00	100.00	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
KAG6598550.1	6.8e-263	70.81	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
KAF3665364.1	7.8e-251	70.35	putative CCR4-associated factor 1 -like protein 7 [Capsicum annuum]	[more]
KAG7029483.1	3.5e-203	69.94	putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp....	[more]
GEX24937.1	6.3e-192	63.35	probable CCR4-associated factor 1 homolog 7 [Tanacetum cinerariifolium]	[more]

BLAST of Carg03951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	1.6e-121	74.26	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	1.7e-120	73.80	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	9.6e-119	75.00	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	7.4e-95	62.12	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9UFF9	7.4e-79	54.34	CCR4-NOT transcription complex subunit 8 OS=Homo sapiens OX=9606 GN=CNOT8 PE=1 S...	[more]

BLAST of Carg03951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLE0	3.1e-160	100.00	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 S...	[more]
A0A6J1GJJ8	3.1e-160	100.00	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454439 PE=3...	[more]
A0A6J1KTM7	2.9e-150	99.62	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496297 PE=3 S...	[more]
A0A6J1GI81	2.9e-150	99.62	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111454440 PE=3...	[more]
A0A6J1BRI8	6.4e-150	93.80	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=...	[more]

BLAST of Carg03951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	1.1e-122	74.26	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	1.2e-121	73.80	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	1.2e-121	73.80	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	1.8e-120	73.88	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	6.8e-120	75.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 275..396 e-value: 5.5E-12 score: 45.6
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 3.0E-11 score: 43.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..261 e-value: 3.6E-95 score: 320.2 coord: 262..528 e-value: 2.8E-98 score: 330.3
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..261
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 261..534
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 261..534
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..261
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..256
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 272..525

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03951-RA	Carg03951-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity