Carg03947 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03947
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF003-like
Location	Carg_Chr12: 2145444 .. 2146059 (+)
RNA-Seq Expression	Carg03947
Synteny	Carg03947

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGGTATCAATGGCGAGGCCTCAACAGCGGTATCGAGGCGTTCGTCGACGGCATTGGGGGTCTTGGGTTTCCGAAATTCGACACCCTTTATTGTAAGTCACAAGCTAATAATTTCAGTTTTGTTTTCAATTTCTTATGTGCTCTGTTCTTCGCAGGAAGACCAGAATTTGGCTGGGCACTTTCGAAACGGCCGAAGATGCAGCCAGAGCCTACGACGGAGCCGCCCGGCTCGTGTGCGGCCCTAGAGCAAGAACCAATTTCCCCTTCAATGCAAACGATTCCAATTCTTTTAAACTCTTCTCTGCAAATTTGACCGCCAAGCTTCACCGGTGCTACATGGCGTCTCTGCATTTGACAAACCCATCGCCGCAAGTGACGACAGAGAACGAAAGGGTGGCGGCGGCGGTGAAAAAGGGTCAGACGGAGATGGCCGCCCATCAGCCGTTTGAGGCTCTGGAAGAGAATGATATTGAACAGATGATTGAGGAATTGATTCATAATGGGTCTGTTGAGCTCTGTTCTGTGATGCCGCCGCCGCCGCCGCCGTCGTCTCAGGCGTTTTGATATTTTATTAAAATTTTATAAAAAACCCATTTTGATCCAACTTTGGGGATT

mRNA sequence

AACGGTATCAATGGCGAGGCCTCAACAGCGGTATCGAGGCGTTCGTCGACGGCATTGGGGGTCTTGGGTTTCCGAAATTCGACACCCTTTATTGAAGACCAGAATTTGGCTGGGCACTTTCGAAACGGCCGAAGATGCAGCCAGAGCCTACGACGGAGCCGCCCGGCTCGTGTGCGGCCCTAGAGCAAGAACCAATTTCCCCTTCAATGCAAACGATTCCAATTCTTTTAAACTCTTCTCTGCAAATTTGACCGCCAAGCTTCACCGGTGCTACATGGCGTCTCTGCATTTGACAAACCCATCGCCGCAAGTGACGACAGAGAACGAAAGGGTGGCGGCGGCGGTGAAAAAGGGTCAGACGGAGATGGCCGCCCATCAGCCGTTTGAGGCTCTGGAAGAGAATGATATTGAACAGATGATTGAGGAATTGATTCATAATGGGTCTGTTGAGCTCTGTTCTGTGATGCCGCCGCCGCCGCCGCCGTCGTCTCAGGCGTTTTGATATTTTATTAAAATTTTATAAAAAACCCATTTTGATCCAACTTTGGGGATT

Coding sequence (CDS)

ATGGCGAGGCCTCAACAGCGGTATCGAGGCGTTCGTCGACGGCATTGGGGGTCTTGGGTTTCCGAAATTCGACACCCTTTATTGAAGACCAGAATTTGGCTGGGCACTTTCGAAACGGCCGAAGATGCAGCCAGAGCCTACGACGGAGCCGCCCGGCTCGTGTGCGGCCCTAGAGCAAGAACCAATTTCCCCTTCAATGCAAACGATTCCAATTCTTTTAAACTCTTCTCTGCAAATTTGACCGCCAAGCTTCACCGGTGCTACATGGCGTCTCTGCATTTGACAAACCCATCGCCGCAAGTGACGACAGAGAACGAAAGGGTGGCGGCGGCGGTGAAAAAGGGTCAGACGGAGATGGCCGCCCATCAGCCGTTTGAGGCTCTGGAAGAGAATGATATTGAACAGATGATTGAGGAATTGATTCATAATGGGTCTGTTGAGCTCTGTTCTGTGATGCCGCCGCCGCCGCCGCCGTCGTCTCAGGCGTTTTGA

Protein sequence

MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF

Homology

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BLAST of Carg03947 vs. NCBI nr
Match: KAG6585492.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020408.1 Ethylene-responsive transcription factor [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.0 bits (855), Expect = 7.5e-88
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60

Query: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA 120
           TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA
Sbjct: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA 120

Query: 121 AHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
           AHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF
Sbjct: 121 AHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 163

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BLAST of Carg03947 vs. NCBI nr
Match: XP_022951696.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA 120
           TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA
Sbjct: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA 120

Query: 121 AHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
           AHQPFEALEE+DIEQMIEELIH GSVELCSVMPPP    SQAF
Sbjct: 121 AHQPFEALEEDDIEQMIEELIHYGSVELCSVMPPP----SQAF 159

[Close]

BLAST of Carg03947 vs. NCBI nr
Match: XP_023002525.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 154/169 (91.12%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQ+RYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARL+CGPRAR
Sbjct: 1   MARPQRRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQ-----VTTENERV-AAAVKK 120
           TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHL NPSPQ     VT E ERV AAAVKK
Sbjct: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLKNPSPQKPAMPVTMEKERVAAAAVKK 120

Query: 121 GQTEMAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
           GQTE AAHQPFEALEENDIEQMIEELIH GS+ELCSVMPPPPPP SQAF
Sbjct: 121 GQTETAAHQPFEALEENDIEQMIEELIHYGSIELCSVMPPPPPPPSQAF 169

[Close]

BLAST of Carg03947 vs. NCBI nr
Match: XP_023538461.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 7.0e-78
Identity = 154/170 (90.59%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQ-----VTTENERV--AAAVK 120
           TNFPFNANDSNSF+LFSANLTAKLHRCYMASLHLTNPSPQ     VTTENERV  AAAVK
Sbjct: 61  TNFPFNANDSNSFELFSANLTAKLHRCYMASLHLTNPSPQKPAMPVTTENERVAAAAAVK 120

Query: 121 KGQTEMAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
           +GQTEM AHQPFEALEE+DIEQMIEELIH GSVELCSVMPPPP   SQAF
Sbjct: 121 RGQTEMVAHQPFEALEEDDIEQMIEELIHYGSVELCSVMPPPP---SQAF 167

[Close]

BLAST of Carg03947 vs. NCBI nr
Match: XP_023546750.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 7.3e-67
Identity = 137/165 (83.03%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTE 120
           TNFPFNANDSN  S KL SANLTAKLHRCYMASLHLTNPSPQ   E +R   AVK  Q E
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAEKKR---AVKMTQME 120

Query: 121 MAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
             AHQPF ALEE+ IEQMIEELIH GSVELCSV+PPPPPP  Q F
Sbjct: 121 -TAHQPFVALEEDHIEQMIEELIHYGSVELCSVLPPPPPPPPQPF 161

[Close]

BLAST of Carg03947 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.4e-51
Identity = 109/177 (61.58%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQR+RGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARL+CGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNAN--DSNSFKLFSANLTAKLHRCYMASLHLTNPS-PQVTTENERVAAAVKKGQT 120
           TNFP+N N   ++S KL SA LTAKLH+CYMASL +T  +  Q  T+  R  +A   G T
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 EMAAH---------------------QPFEALEENDIEQMIEELIHNGSVELCSVMP 154
              +H                     Q F  LEE+ IEQMIEEL+H GS+ELCSV+P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]

BLAST of Carg03947 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRG R+RHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYD AARL+CG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPF--NANDSNSFKLFSANLTAKLHRCYMASLHLTNPS 99
           TNFP+  NA+ S+S KL SA L AKLHRCYMASL +T PS
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPS 100

[Close]

BLAST of Carg03947 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.1e-23
Identity = 59/116 (50.86%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 6   QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFPF 65
           +++RGVR+RHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYD AA L+ G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NAND-------------------SNSFKLFSANLTAKLHRCYMASLHLTNPSPQVT 103
           N N+                   S S    S+ L+AKL +C        +PSP +T
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC------CKSPSPSLT 114

[Close]

BLAST of Carg03947 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-21
Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 6   QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFP- 65
           +++RGVR+R WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD AA L+ G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNSFKLFSA---------NLTAKLHR-C-----YMASLHLTNPSPQVTTENERVA 111
             +N SNS ++ SA          L AKL + C     Y+  L L N S  +    +R  
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

[Close]

BLAST of Carg03947 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.1e-20
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 6  QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFPF 65
          +++RGVR+R WGSWVSEIRHPLLK R+WLGTFETAE AARAYD AA L+ G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NANDSNS 73
            ++  S
Sbjct: 65 VKSEEGS 71

[Close]

BLAST of Carg03947 vs. ExPASy TrEMBL
Match: A0A6J1GI88 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111454444 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.1e-82
Identity = 156/163 (95.71%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA 120
           TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA
Sbjct: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTEMA 120

Query: 121 AHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
           AHQPFEALEE+DIEQMIEELIH GSVELCSVMPPP    SQAF
Sbjct: 121 AHQPFEALEEDDIEQMIEELIHYGSVELCSVMPPP----SQAF 159

[Close]

BLAST of Carg03947 vs. ExPASy TrEMBL
Match: A0A6J1KP69 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111496339 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 154/169 (91.12%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQ+RYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARL+CGPRAR
Sbjct: 1   MARPQRRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLMCGPRAR 60

Query: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLTNPSPQ-----VTTENERV-AAAVKK 120
           TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHL NPSPQ     VT E ERV AAAVKK
Sbjct: 61  TNFPFNANDSNSFKLFSANLTAKLHRCYMASLHLKNPSPQKPAMPVTMEKERVAAAAVKK 120

Query: 121 GQTEMAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
           GQTE AAHQPFEALEENDIEQMIEELIH GS+ELCSVMPPPPPP SQAF
Sbjct: 121 GQTETAAHQPFEALEENDIEQMIEELIHYGSIELCSVMPPPPPPPSQAF 169

[Close]

BLAST of Carg03947 vs. ExPASy TrEMBL
Match: A0A6J1KC60 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491967 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.6e-66
Identity = 136/166 (81.93%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSN----SFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAA----AV 120
           TNFPFNANDSN    S KL SANLTAKLHRCYMASLHLTNPSPQ    N  + A    AV
Sbjct: 61  TNFPFNANDSNSSSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAANNPMTAEKKRAV 120

Query: 121 KKGQTEMAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPP 159
           KK Q E  AHQPF ALEE+ IEQMIEELIH GSVELCSV+PPPPPP
Sbjct: 121 KKTQME-TAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPP 165

[Close]

BLAST of Carg03947 vs. ExPASy TrEMBL
Match: A0A6J1HGM1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462773 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65
Identity = 134/160 (83.75%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAAAVKKGQTE 120
           TNFPFNANDSN  S KL SANLTAKLHRCYMASLHLTNP PQ   E +R   AVK  Q E
Sbjct: 61  TNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPLPQKPAEKKR---AVKMTQME 120

Query: 121 MAAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPP 159
             AHQPF ALEE+ IEQMIEELIH GSVELCSV+PPPPPP
Sbjct: 121 -TAHQPFVALEEDHIEQMIEELIHYGSVELCSVVPPPPPP 156

[Close]

BLAST of Carg03947 vs. ExPASy TrEMBL
Match: A0A1S3BBS3 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488339 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.8e-56
Identity = 123/169 (72.78%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQRYRGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARL+CGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNANDSN--SFKLFSANLTAKLHRCYMASLHLTNPSPQVTTENERVAA---AVKKG 120
           TNFPFN+NDSN  S KL SANLTAKLHRC MASLH   P+         VA       +G
Sbjct: 61  TNFPFNSNDSNSSSSKLLSANLTAKLHRCCMASLHFQKPATHRFNSGADVAGIKPLTVEG 120

Query: 121 QTEM-AAHQPFEALEENDIEQMIEELIHNGSVELCSVMPPPPPPSSQAF 164
            T+    HQPF ALEE+ IEQMIEELIH GSVELCSV+PP     SQAF
Sbjct: 121 NTQTEIGHQPFVALEEDHIEQMIEELIHYGSVELCSVVPP-----SQAF 164

[Close]

BLAST of Carg03947 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-52
Identity = 109/177 (61.58%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 1   MARPQQRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRAR 60
           MARPQQR+RGVR+RHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYD AARL+CGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPFNAN--DSNSFKLFSANLTAKLHRCYMASLHLTNPS-PQVTTENERVAAAVKKGQT 120
           TNFP+N N   ++S KL SA LTAKLH+CYMASL +T  +  Q  T+  R  +A   G T
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSADSDGVT 120

Query: 121 EMAAH---------------------QPFEALEENDIEQMIEELIHNGSVELCSVMP 154
              +H                     Q F  LEE+ IEQMIEEL+H GS+ELCSV+P
Sbjct: 121 ANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 177

[Close]

BLAST of Carg03947 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-24
Identity = 59/116 (50.86%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 6   QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFPF 65
           +++RGVR+RHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYD AA L+ G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NAND-------------------SNSFKLFSANLTAKLHRCYMASLHLTNPSPQVT 103
           N N+                   S S    S+ L+AKL +C        +PSP +T
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC------CKSPSPSLT 114

[Close]

BLAST of Carg03947 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 60/121 (49.59%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 6   QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFP- 65
           +++RGVR+R WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD AA L+ G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNSFKLFSA---------NLTAKLHR-C-----YMASLHLTNPSPQVTTENERVA 111
             +N SNS ++ SA          L AKL + C     Y+  L L N S  +    +R  
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

[Close]

BLAST of Carg03947 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-21
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 6  QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFPF 65
          +++RGVR+R WGSWVSEIRHPLLK R+WLGTFETAE AARAYD AA L+ G  A+TNFP 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 NANDSNS 73
            ++  S
Sbjct: 65 VKSEEGS 71

[Close]

BLAST of Carg03947 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-19
Identity = 58/121 (47.93%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 6   QRYRGVRRRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDGAARLVCGPRARTNFP- 65
           +++RGVR+R WGSWVSEIRHPLL   +WLGTF+TAE AARAYD AA L+ G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  FNANDSNSFKLFSA---------NLTAKLHR-C-----YMASLHLTNPSPQVTTENERVA 111
             +N SNS ++ SA          L AKL + C     Y+  L L N S  +    +R  
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 122

The following BLAST results are available for this feature:

BLAST of Carg03947 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585492.1	7.5e-88	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022951696.1	1.0e-81	95.71	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
XP_023002525.1	2.2e-79	91.12	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]
XP_023538461.1	7.0e-78	90.59	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_023546750.1	7.3e-67	83.03	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of Carg03947 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	3.4e-51	61.58	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	1.1e-38	78.00	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	5.1e-23	50.86	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	3.7e-21	49.59	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	9.1e-20	67.16	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg03947 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI88	5.1e-82	95.71	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KP69	1.1e-79	91.12	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1KC60	6.6e-66	81.93	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HGM1	2.5e-65	83.75	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3BBS3	4.8e-56	72.78	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Carg03947 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	2.4e-52	61.58	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.6e-24	50.86	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.6e-22	49.59	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	6.4e-21	67.16	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	1.6e-19	47.93	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 65.45
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 4.8E-38 score: 142.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..52 e-value: 2.4E-10 score: 40.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 21.311447
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..64 e-value: 2.11999E-32 score: 108.128
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 1.4E-25 score: 91.2
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 112..151
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..112
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 1..112
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 112..151
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03947-RA	Carg03947-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity