Carg03937 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03937
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nuclear transcription factor Y subunit gamma-like
Location	Carg_Chr12: 2104386 .. 2104880 (-)
RNA-Seq Expression	Carg03937
Synteny	Carg03937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGTGAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGCCGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGGTCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGCCAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA

mRNA sequence

ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGTGAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGCCGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGGTCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGCCAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA

Coding sequence (CDS)

ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGTGAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGCCGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGGTCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGCCAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA

Protein sequence

MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN

Homology

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: KAG7020398.1 (hypothetical protein SDJN02_17082, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 4.6e-85
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS 60
           MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS
Sbjct: 1   MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS 60

Query: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI 120
           NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI
Sbjct: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI 120

Query: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 165
           GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Sbjct: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 164

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: KAG6585483.1 (hypothetical protein SDJN03_18216, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS 60
           MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS
Sbjct: 1   MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS 60

Query: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI 120
           NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLS YSSRRLNMRRSAMTNSLVRI
Sbjct: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSAYSSRRLNMRRSAMTNSLVRI 120

Query: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 165
           GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Sbjct: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 164

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_022951456.1 (uncharacterized protein LOC111454267 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 3.6e-82
Identity = 160/164 (97.56%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS 60
           MNNETSGPVLRPLPAGGGGGF+STFFHNHRRSASSRVNISSSPM HSVRFSLGHRSIAVS
Sbjct: 1   MNNETSGPVLRPLPAGGGGGFNSTFFHNHRRSASSRVNISSSPMSHSVRFSLGHRSIAVS 60

Query: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI 120
           NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQ LS YSSRRLNMRRSAMTNSLVRI
Sbjct: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQTLSAYSSRRLNMRRSAMTNSLVRI 120

Query: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 165
           GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Sbjct: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 164

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_023547160.1 (uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207.6 bits (527), Expect = 8.1e-50
Identity = 125/187 (66.84%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSS 60
           M  ETSGPVLRPLPA G                GF ST   FFHNH RSAS +RVNISS 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPIASPFAASTSFGFSSTSSSFFHNHERSASPTRVNISSG 60

Query: 61  PMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSR 120
           P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CSPT HPGSFRCSLH+N G+  
Sbjct: 61  PLSRSVRFSIDHRSGSPSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGG 120

Query: 121 HHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRP 161
           HHQ    YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RP
Sbjct: 121 HHQ---TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRP 180

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: KAG6598561.1 (Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.1 bits (523), Expect = 2.4e-49
Identity = 124/188 (65.96%), Postives = 134/188 (71.28%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSS 60
           M  ETSGPVLRPLPA G                GF ST   FFHNH RSAS +RVNISS 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNHERSASPTRVNISSG 60

Query: 61  PMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSR 120
           P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CSPT HPGSFRCSLH+N G+  
Sbjct: 61  PLSRSVRFSIDHRSGSPSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGG 120

Query: 121 HHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRP 162
           HHQ    +SS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RP
Sbjct: 121 HHQ---THSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRP 180

[Close]

BLAST of Carg03937 vs. ExPASy TrEMBL
Match: A0A6J1GHM5 (uncharacterized protein LOC111454267 OS=Cucurbita moschata OX=3662 GN=LOC111454267 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 160/164 (97.56%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVS 60
           MNNETSGPVLRPLPAGGGGGF+STFFHNHRRSASSRVNISSSPM HSVRFSLGHRSIAVS
Sbjct: 1   MNNETSGPVLRPLPAGGGGGFNSTFFHNHRRSASSRVNISSSPMSHSVRFSLGHRSIAVS 60

Query: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI 120
           NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQ LS YSSRRLNMRRSAMTNSLVRI
Sbjct: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQTLSAYSSRRLNMRRSAMTNSLVRI 120

Query: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 165
           GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Sbjct: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 164

[Close]

BLAST of Carg03937 vs. ExPASy TrEMBL
Match: A0A6J1K7C8 (uncharacterized protein LOC111491813 OS=Cucurbita maxima OX=3661 GN=LOC111491813 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 122/180 (67.78%), Postives = 132/180 (73.33%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGG------GGGFHST---FFHNHRRSAS-SRVNISSSPMFHSVRF 60
           M  ETSGPVLRPLPA G        GF ST   FFHNH R+AS +RVNISSSP+  SVRF
Sbjct: 1   MKKETSGPVLRPLPAAGRFAASKSFGFSSTSSSFFHNHERNASPTRVNISSSPLSRSVRF 60

Query: 61  SLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVY 120
           S+ H      RSI +SNRNSPVS P   C CSPT HPGSFRCSLH+N G+  HHQ    Y
Sbjct: 61  SIDHRSGSPSRSITLSNRNSPVSLPKKTCTCSPTTHPGSFRCSLHRNSGNGGHHQ---TY 120

Query: 121 SSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE 162
           SS  LNMRRSAM NSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RPSRLS +S+
Sbjct: 121 SSSGLNMRRSAMKNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSK 177

[Close]

BLAST of Carg03937 vs. ExPASy TrEMBL
Match: A0A6J1HGM5 (uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC111462780 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.6e-49
Identity = 124/188 (65.96%), Postives = 133/188 (70.74%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGG--------------GGGFHST---FFHNHRRSAS-SRVNISSS 60
           M  ETSGPVLRPLPA G                GF ST   FFHN  RSAS +RVNISS 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSG 60

Query: 61  PMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSR 120
           P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CSPT HPGSFRCSLH+N G+  
Sbjct: 61  PLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGG 120

Query: 121 HHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRP 162
           HHQ    YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RP
Sbjct: 121 HHQ---TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRP 180

[Close]

BLAST of Carg03937 vs. ExPASy TrEMBL
Match: A0A5A7VCJ2 (Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002280 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 9.1e-47
Identity = 121/197 (61.42%), Postives = 132/197 (67.01%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGG------------------GGGF----------HSTFFHNHRRS 60
           M  ETSGPVLRP PAGG                    GF          H    HNH RS
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60

Query: 61  AS-SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS---QPCMCSPTNHPGSFRCSLH 120
           AS +RVNISS+P+  SVRFS+GHRS +  +SNRNSPVS   +PCMCSPT HPGSFRCSLH
Sbjct: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQR 162
           K  GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ R
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

[Close]

BLAST of Carg03937 vs. ExPASy TrEMBL
Match: A0A1S3BC71 (nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC103488327 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 9.1e-47
Identity = 121/197 (61.42%), Postives = 132/197 (67.01%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGG------------------GGGF----------HSTFFHNHRRS 60
           M  ETSGPVLRP PAGG                    GF          H    HNH RS
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60

Query: 61  AS-SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS---QPCMCSPTNHPGSFRCSLH 120
           AS +RVNISS+P+  SVRFS+GHRS +  +SNRNSPVS   +PCMCSPT HPGSFRCSLH
Sbjct: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQR 162
           K  GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ R
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

[Close]

BLAST of Carg03937 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-34
Identity = 90/173 (52.02%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 3   NETSGPVLRPLPAGGGGGFHSTFFHNHRRSAS-SRVNI-SSSPMFHSVRFSLGHRSIAVS 62
           + TS     P  A      H    H+H RSAS +RVN+ ++ PM  S R+SL  RSI+ +
Sbjct: 42  SSTSSSFSSPSSAFFSNHRHHESNHSHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPT 101

Query: 63  NR------------NSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNM 122
           N+            N  +S+ CMCSPT HPGSFRCSLHKN  ++ H Q  + Y++  LNM
Sbjct: 102 NKSISVSKNQPPSHNHKISRRCMCSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNM 161

Query: 123 RRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE 162
           RRSAMTNSLVRIGGVEG+ V RALT LIRPSSH  +RRA +Q RPSRLS M++
Sbjct: 162 RRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAK 213

[Close]

BLAST of Carg03937 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 134.4 bits (337), Expect = 8.1e-32
Identity = 81/150 (54.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 27  HNHRRSASSRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCM 86
           H HR ++ +RVN+ +S+PM  S R+S+ +RSI+  NR+  VS              + CM
Sbjct: 69  HQHRSASPTRVNLFTSAPMTQSFRYSIDNRSIS-PNRSIAVSSNKPSNHHKIPDSRRRCM 128

Query: 87  CSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRA 146
           CSPT HPGSFRCSLHKN  ++ H Q  + Y++  LNMRRSAMTNSLVRIGGVEG+ V RA
Sbjct: 129 CSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRA 188

Query: 147 LTALIRPSSHQQRRRANFQSRPSRLSAMSE 162
           LT LIRPSSHQ +RR+ ++ R SRL++MS+
Sbjct: 189 LTTLIRPSSHQLKRRSAYEPRRSRLASMSK 216

[Close]

BLAST of Carg03937 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 134.4 bits (337), Expect = 8.1e-32
Identity = 81/150 (54.00%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 27  HNHRRSASSRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCM 86
           H HR ++ +RVN+ +S+PM  S R+S+ +RSI+  NR+  VS              + CM
Sbjct: 69  HQHRSASPTRVNLFTSAPMTQSFRYSIDNRSIS-PNRSIAVSSNKPSNHHKIPDSRRRCM 128

Query: 87  CSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRA 146
           CSPT HPGSFRCSLHKN  ++ H Q  + Y++  LNMRRSAMTNSLVRIGGVEG+ V RA
Sbjct: 129 CSPTTHPGSFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRA 188

Query: 147 LTALIRPSSHQQRRRANFQSRPSRLSAMSE 162
           LT LIRPSSHQ +RR+ ++ R SRL++MS+
Sbjct: 189 LTTLIRPSSHQLKRRSAYEPRRSRLASMSK 216

[Close]

BLAST of Carg03937 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 72.8 bits (177), Expect = 2.9e-13
Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 5   TSGPVLRPLPAGGGGGFHSTFFHNHRRSASS--RVNISSSPMFHSVRFSLGHRSIAVSNR 64
           +S  VLRPL        H+   H+HR+ + S    N++    F+S   S+   S+   + 
Sbjct: 7   SSRSVLRPL--SSSQRLHNNHHHHHRQRSPSPCNKNLNLRLKFYSPG-SIPKPSVVTVSS 66

Query: 65  NSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRR------------LNMRR 124
           N    + C+CSPT HPGSFRCS H+     +   + S    R             LN+R+
Sbjct: 67  NHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRK 126

Query: 125 SAMTNSLVRIGGVEGDLVNRALTA-LIRPSSHQQRRRANFQSRPSR 156
            A+ NSL +IG VE +   R+L A L +PSS    RR  F+ R SR
Sbjct: 127 LALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

The following BLAST results are available for this feature:

BLAST of Carg03937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020398.1	4.6e-85	100.00	hypothetical protein SDJN02_17082, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6585483.1	1.3e-84	99.39	hypothetical protein SDJN03_18216, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951456.1	3.6e-82	97.56	uncharacterized protein LOC111454267 [Cucurbita moschata]	[more]
XP_023547160.1	8.1e-50	66.84	uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]	[more]
KAG6598561.1	2.4e-49	65.96	Protein MEMO1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg03937 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg03937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHM5	1.8e-82	97.56	uncharacterized protein LOC111454267 OS=Cucurbita moschata OX=3662 GN=LOC1114542...	[more]
A0A6J1K7C8	2.6e-49	67.78	uncharacterized protein LOC111491813 OS=Cucurbita maxima OX=3661 GN=LOC111491813...	[more]
A0A6J1HGM5	2.6e-49	65.96	uncharacterized protein LOC111462780 OS=Cucurbita moschata OX=3662 GN=LOC1114627...	[more]
A0A5A7VCJ2	9.1e-47	61.42	Nuclear transcription factor Y subunit gamma-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BC71	9.1e-47	61.42	nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Carg03937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	2.3e-34	52.02	serine-rich protein-related	[more]
AT5G25280.1	8.1e-32	54.00	serine-rich protein-related	[more]
AT5G25280.2	8.1e-32	54.00	serine-rich protein-related	[more]
AT5G20370.1	2.9e-13	34.34	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..164
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 23..162
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 23..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03937-RA	Carg03937-RA	mRNA