Carg03790 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03790
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpre-mRNA-processing factor 39-like
LocationCarg_Chr08: 159161 .. 168685 (+)
RNA-Seq ExpressionCarg03790
SyntenyCarg03790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGGGAAAACGGTAATCTCCATCGCCCTTCTGCCCTCGACTCCTCAAAAATCAAGCAGAGGGAGTCTCAGCTCCTTTTCTCTCGAATTCTCAATTAGCTTCGCATTTCAAGGGCACACCCATTTGTTTTTTTCTTCCATCAACTTCCACTCCTCTCTCCACTCCACACCCTCGTCTTCTTCTTCCTTTCGGTAAGTTCTTCTGCTTCCTCTTGTACAACTGCTCCTCGATTGGATGTTCTGGAAGTTTCATCTTTTTCTATGGCTATTATGTTTGTTGGTCATGTTACTGCTCTGTTATGTTCGCAACTGATTGTATGTTATGCTATGCTCTTCTGCGCCATTAATTTTTTTGTTTTATCGTTAAATTTCCATGTCTTCTTTGTTTTTGGGTTTGATTCAAACTAATGTACATACCAGAGTTGATGCTTCTGAAGTAAAGGGGCTGCTGTTTAATTCAAGCACATTGTCTTTTGTTTTTCTGGGTTTAGGATTCTAGCTCAATTTTTGAAGGCCACCTCCTTCTTCTTTGTCTTTTGTTCTATGCGATAGTTGTTTAAATGCATGCAGTTAGGCTAGCAAAGAATTATTTTTGTAGTTTAAGCATGGGGGACAGTGAAACTATAGTTGCCCAAACATCTGAATTCATGAGGTATACATATGCTGGCTATGTTTCGAGTGGCTATGCTGATAGCAGTACAAATCTAATTCCTCATCCTGGCGTTTTTCTATCTGTGATCACTGGAGACTTTAAAGTTACACCTATGTATGCAGATATGAGTGATGGCAATGCGTATGTTACGGATCCCAATTCTATTCAGCAAGGAAATCATGTTGGTGAGGTAGATGAGGCGATGGTATCTGTAGGAGTGACTGACCATAGTCAGAATAATGCTGTATCAGAAAATTCAGCAATGGAAACTGCTGAAGTAGTCAGTCATGATTCTTCTTTAAATGGAAGTGTTGCAGCCATATCGGACAATGCCTTTTCTGTTGAGAACGGGAATGCTGTTGAGAATACCAACGAGGCTTCTGAGGAACAACACTTTGTTGATGGTTCTGGTACGTGTCTCTCGTTTTTCGTTTCCTGCATTTCATGAGAATTTCATTTGGTAATAAGCATTTTAACAAATGGGGCAGGCAAAAAAAAAAAAGAAGAAAAAAAAATCAATCTAAAAGGTTCTGCAATTTTGAGGGCACACGAAGCAAAAGTGTTATGTTTCTGAACTCTTAATAGTAATGAAGCTTCTTGAGAAGCAATGAAGAATTCTGCATTTTGTTTCTTAAAGATGTGTCCTCCTATCTTTTCAAAATCTTAAAAAGCTTTTCCTTCTAAGCTTCCTATTGTATTAAAGTCTTCAGGCTAGTTTTTCGTCCTATTGTTATAAAGGCAAGTAGATAGTACCCAAACACCTTCGACTATGAGGCTATGAGATATCCAAAATATGCATATATTCGTAATTAAATATCAGAGGGACCTAAATACTTAAAATCAAGCATCTGATGGATAAAAAAAGCACATACATTGTGATCAATGATCCTAACAGTGCTTTAGAAGCGGTATTTGAATTTCATTCAGATAGTTCTGCTCTTTAATGGATCTTGTATCTGGAAACAGTTTAGACTGTCGGTAGCTAAAAATGGATTTTTCCTTAGAATGGAAAAGAAAGTAACTAGAATTTGATGGTACTCTTTATCTGGATGATTAGTCTCTCGATGGTAGCATTGTTTCTCTTAGTATTAGTTAGTCACTTGGGATGGTATATGCTTCATGCTTTTAAAGAGGTTCTGGAGTACTTATTGCTAGGATCCTGCTCATGTCTTGGTAGATACAGCCTCGTCATTTACTTCCGTATGCTTCAGCCAAATTATTTACTGTCTCATAAAAAAAATTATTTCTTGTGTGAAATAAAATAAGCTTGTAAGGTTCGCTGAAAAGGGGCTTGAAAGAACATCAAATTTACATTTTATGTTAAAAGTTAATGGTTTTCCGGTTTTCATTCATAGATGAATTTTCGATGAAACAGTCTTCAAAAGGAGAATTCAAAAACTTAAAACTAGCAACCATAAATCCCAGAAATAACAACTACCTAGACCTCAAGTCCACTTGCAGCCGTCTTTTTATTTGATAGGAAGAAGAGTAATACCAACTTGATTAACGTAATCTAAAAGATCTTTTTCTTCGAGAACTAGAGGTTAAGGGCCTTGGCTTAGAACCACTCTCAGTGGGATTAGATGAACAAGAAGGATTGCTGAGAAATAGGGTTTAAATCCCTGTCTTGAACTTCGTTGGAAAGAGAAAATAAACCACCTTCAAAGTTGTCTTCCATAAAGCCAACATTATAATAAAGAGAAGACTGTAATTGCAAAATAATTCAGGGTGGTTTGAGACATTATATATTATTCTACTCTCTTCTTAACAAGTTCTCGACTTTCTAGCATTAGCTTAGCTTTAGCTTAGGTTCTAGTCACATTATCATTTCCATGATTATGAAACATTTACACGTTTCTTCCTGGATCTGAGGAACCTTTAGTTTGGCTTATGTTGCTGCTCATCTTCTCTTTTGGTTTCCTCGTTATCATTATTATGACTCAATTACTGCCTCCAAGCGCATTTTGATCCATTATTGTCTTTGACTTTTTGTTTGATACCTTGGTTTATGGACGTGAGGCATTATTCACTCTCATGTTGCTGCTCAGGGTGAGAGCTTGTTCTCGACCTTTATAAATATATGAAGAAAATAATGTGCATATTTAGGTTACATGGTCGCTAAACTTCTTTCTATTTGATTACTGTTATCAGTAATAACTTCTTTTTGTTGCCTAATATTTCCTCACCTTTTTTTGGCAGTACCTCCATTATCTGCTGAAGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTCTAGATTTTAATGCTTGGACTTCTTTGATCGAAGAGACAGAGAAGGTGGCAGAGGTATGCAAGAATGAATATTAAAAAGTATTATGGTTTATCATTTTATGGAAAGACTTATTCCAGTTTTGGCTTCTTTTCAGGATAACATACTCAAAATCCGGCGAGTTTATGATGCCTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGATCATGAGGCACGGTTTGGTTCAACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTGCATGGGGTCACCTACTCGGTTGATATTTGGCTGCATTATTGCATATTCACTCTTAGTACATATGGAGATCCAGAGACCATTAGAAGGTATAGCATTCTGTTTTCCTATTTGCATTTCCTGGTGTACCAATACTATGACTCTTAGTTACTTGGACCTGATAACAATCTTCTTCTCTTTGCTTGTAACCTCTGTTTAGATGGCTGTACCAGTGATTTCCTACATGTAAGGTGGAAAGATTTGATTGAAATATAGATTGGAATTGCATGTTCCAATGTGCATCCCCTGATATGGGGTTACAACGTTATATGCCTTTTTTAAAGTTATTTTTAATAAAAGATATAGTGTCAATTTCCCATCGTCTATTGTGGATTATGCCTTAGTCTGTAGTTATGGTGAACTACAGCAGTTGTTTAACCTTGGTCCACTGAGATGCATCAATATACAAATTGCTGCTGGGAATATCACGTTCAGTTATGGGCTAAGATGGCCTCTATCATTGCTTCATTCACGGACATAATTTGATTTTTAGGAAGGTAATTGAAGCATGCTGAAGTGTCATATGCTGTTAGAGTAAATTGTTCCTTCACCTTCAACGTTAGTGCAGTTGTTTCTGTTTTGTGAATACTTTGCACCACTTGATGATCTTTAGTTACTTAATAACCTTTTCCTGGTTGATGATATTTCAGGCTTTTTGAGAGAGGATTAGCGTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATACGAGTACACGCAGCAGGAGTGGGGTCGACTGGCTATGATATACACACGTATACTAGAAAATCCAAATCAACAGTTGGATCGGTATTTCAATAGGTGAGTCTTGCGAATCCGGACAATATTACTGTCTGTCATAATAATTTGGTATTGCCTTTTCCGGTGATCTTAATTCTTTTGCTTTTGAACATGGATGCTACTCTTAGATGTACTTGTCATACTTGCTAAGTCAACATTTTGTTGCTGGCTGGGGGTTATACACCCTTTTGTTGTCTGAATTACATTCTGTGTCAGGGAAAGCTATTCAGATAGATGGTTGTATGGGATTGATACTAATCCATATAGCTTTGTTAAACTTCTTTCCTTAATAAATAATCTAAAGTGTCCTTTTCCCTTTGGATCATGATGCAAATGTGTTGCAGCTTCAAGGAGTTGGCTGCAAATCGGCCATTGTCAGAGTTGAAGAGTTCTGAGGAGGCTGTATTAGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAGGAAGGTCATCCTGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTAGACCACTAAATGTTGCAGAGCTTGATAATTGGCATAGTTACTTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTACTTTAGTTTGTTTCTTGTTTTAAATATGTTTATTTTTTTTCGTTTTTAGTCGTCCTTGTTATATATTGACTTACAGTTAAAAAATATCTGCTGCATCATATGCTTTACTGGCTAAACCATTGGATGAAGCAACTATTTAATCGGGAATTTGAACTGAGACTAAAGCAGGGCCCTTCAATTTGGTTTCTTTAAGGCTAAGTACTTCGAACTCTCATTTATCAGTGGAGATTCTAGGTTCATGATGTGTTTGTACAGTAACTTTTTATTCTTTTTAAAATTCCAATGTTATGCATGCAGGTATCTTATCTTCCTAACCATCTGTCTGTCAGGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACTGAGGAGTATTTCTGTTGCATATCTCTTTTCTGTTTCTTATCACATCTTTACATAAGGAATTTTAAATGTGAAGACCGTTTTATATGTTTTTCCTTTTTTCTTGTTTGAATTTTTTGTGAATAGGTGGTGAAGTTATACGAGAGATGCGTTATTGCTTGTGCCAACTATCCTGAATACTGGGTTCGGTATATTTTATACATGCAAGCAAGCGACAGTATGGATCTTTCCAATAATGCGCTTGCTCGAGCAAGCCAAGTTTTTGTCAAGGTAGGGAATACATGCATCTACCATTTACCTAATCTTATGATAATTGGTTGTAGTTATCATGATTAAGGACATGCATCTACCATTTACCGAATCTTATGATAATTGGTTGTAGTTATCATGATTAAGGATGACCTATTCATGATCCTACATAACTTATAATGTATCAAGAGGCTTACTAGTCAAAAGGTTTTGGCTGGGCCACACAAGTTGTGGGCTTCCACTGGTGTACTTAGGGTTGTTTCCTCTTCCTGCATCCTCTTTAAGTGAGAAACTCAACTATCATTAACTAGTACAATTATCACCTAATGTATGCTTACAAATTATAATATTTGGTTGCAACAATGACTAGTACAGTAAAATGTGCATTGATCAATTTATTTTCACAAAAGGTTTGGTTGAAGCATTTTGAGAAAGACAGAGCATAGTCAACCTAAGTCCACAAGTAAATCAATATGGCATGACACAGTCAATGTTAGTGCATTTTCCAAATAATCAAAAGACAGCACCAGTTTCCAAAAATTTATGACCTAGCTTGTTTTGACCAAGATACTAAGACATTGTTGACAGAAATATTTGTTTGTACTTTTTTAAACGTTTCAATATTCTCATACAGTGACATTGTTGACAGAAATATTTGTTTGTACTTTTTTATGAGTTATGAGAGACATTAAGATGTATGCTTTTATGTATATTCACTCCAATTTATATTATTTGGGAAATTGGAGATTCAAGGCATAAAAACATCCTTATTTTCATGGGCTGTATTGTATGTGAAAAAGGTACTTAAATATCTCTAGCCCTTGTGTCCTTCTCCTGTGTACATAACCCTATCTCATCTTGGCCACCAAATCCTTTCTCAGTCCAACCAAGTGGTTGACTAATACAAACATCTCGATTGTAAGCTCTGTTAATGTGGATTCATTTTTCCTCCCTATATGCAATTATTTTGCTTTATGAATTATTGCTATATCTTCTTTTTGAAGAAAAGTCCCAGTATATTATTTTATACATTTTCTTAATTAAACAAGTTCGAATAATGTTTGACAGCTTGCTGGAGACTATGTTAGTCAGCTGGTATCCCTAGATATTGATGTCTATGATGCATGGAATGGTAGACCTTTTTTAAAAAGTTATTTAGTTTGGATTTTAAGTTAATATGTACATGCATCCCAAACTTCAACAGAGACGACCGGAGATCCATTTATTTTCTGCTCGGTTCAAGGAGCAGAACGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTCGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATAATTAAGCATGCTAATATGGAACATCGTCTGGTAAGATGTCTTAAATAAGTTGTGATACATAGTGATGCATGGATTTTTAAATTTGGCCGTTTGAATTTTCAGGGAAACCTGGAAGAGGCATACTCTGTATATGAACAGGCCATCGCCATCGAAAGAGGAAAAGAACATTCTCGTGCATTACCGCTGTTATATGCTCAGTACTCGAGATTTCTGAACTTGGTATGTTTGCTGAAATTATGGTCCCTCTGCTTGGAGATTGTTCACATAATTAAGCATTCTGCATTTGTCCTTTCATAGTTTTCATTATGCTTCTTTACACCTCTAACTTAAATGGGGAACACTAAACGCATTTTGATTAATAATATAGGTTTCTAAGGATTTTGGATGTTACTGTTTATCTAGAGTTTACACCAAAAAAGTGCAACAAAAATAAAAGAGTCCAAACAGAAAATTGGGGTTTTTGTTCATTGTTTTTGCAAAAAAGAAAAAAAGAAAAATTGCCACCACAACGAAGGGTCTCAAGGAGCGGATACTCGAAGTAGATAGGACACGATTCAACCTAGCATCAAAGGAGAAAATCTTCTGAAACCCTTGAATGAGAATTTATTATGATTCAAAAAGTCTGCCAATGCAAAGGAGGAACCACATATTTATTGAGGATTTAAGCTAAGTAATTAAACTAACCTAACTATAAGCCTTACTTAAAAAGTGTCTTTTGGTGTATTTCTGTGTGTATTTTCTATCTTATTTAGAAAATTCGGCTATTTCATATTTTTGTTGTACCTAGTATTGCTGAGGTGGAAATGTTTTTAAACTACTGGCCTTTTTTCTTTTTTTGTTGATACTGATGCACAGCTTTTGAAGGGAAGTATTCCCCAGTTGTGCAAGACATTTCGTTTATATTAAAATAAAGAAGCTTGCTATTTTTTCTTTGGTCTTCTCAATTTTTTGAGCAGTCTCTTCTGGGGGCATGCGGTTAGTTGAATCAGCCTTTTTCTTGATTTCTGGAGCGTTGTTTTCTTAGAATCTTGTCTCTTCACTGTGTTGACAGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTTGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCGCTCATTGAGGTACTCCCTCTCTTTCCATATTTTGAAATATTTGAATTTAATCTCATAACTGTTGCTTTCCTGCGGTTAAATGAATACCTTTTTGCCTCCATGATTCATCCAGGCCTTGATTCATTTTGAGTCAATTCAGTCAGCAGCAAAGAGAATTGGTTATTTAGATTCATTAGTTGAGAAGGTCATAGTGCCCAATACAGAGAATGCATCGGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCAAGCATTTTCTTGGAGGTACGAATAAAGTTCATTATGTTTGCAGGGATAAGGCTTTTGAGGGTTGATAGACGTAATTGCAAGTTAAATATGAAGAATTAACTTCTTGGTCATGAGTATACTAGGAATTGTTCATTTGTTTTGGTTGACCCTACATTGATACAGATTGATAAGATTATTTAGTAGAAAGGTCCCTTGTTTTTCCACCTTAATTTGGGTCGCACTCCTCTTTGGAGTTGTCAATATCTCCATTGCATGTATAATATTTTGGTACAGAGCAACACCAAGTTGAAGTATTTTAAAGGTAGAAAGTTCTTATTTGATGATGCTGAATACGGGAAGTAGATGCTCACGACATGAAATCTTTCTGACATTTTCTTGATCAGAAAATCTTTCTTCCATTAAAATACGTTTGGATTGTACTTTCCTGAATGCGCTCATGAATGATTTTGCAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCGGAGGACAGACATGCAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCGCCAGCACAATCTGTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGCTTACAACCGCAAGCCTGGCCACCTGTTGCTCAAGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGTAAATGCCTTTTTATCTTTCACTCTTTTTATTCTTCATATAACAAATAATGGAACATTTCACACAAAAGGTCTAATTGCCCTTGTTATGTTTAGTAAATCCCGTCACTACTTGTGGAAGGTAAAGGCGAACTCACTTGTTTCTTTTTCCATTCCATGTTTTCTGGTTTCTATATACTTCATTTCTACCCTTCCAGTCACATAACACAGTCATTTGGCTTGCGTTATTTCCACACGAAGTAAAGAGCAGAAAAGAAATAACCCTTCTATTGTTTCCTCCCGTCTACACGAATACAGGCCTCGTACAGTGGGTATGGAAGCACATACACGAATCCACCAGTGTCCACATCAGTGTCACAAGCCTCCACTTATGCGACCTATCCTCCTACATACCCTGTCCAGGTATTAAATCCTTCTCATCTCTTGTTAATTCCACAATATTTTGTTAGTTGGCCGGTTTCAAGAGACGTAGAACAATCATCTGTTTTGAGTTTGATGTGTTTGATGAGTACTTGAACTCAAAAATCATATTTTTCATGAAATGTTGTGTTTATTTACAGCAGCAGGCATATTCTGCACAGAGTTACGCCCAACCGACTGCTCAAGCAACAATTACACCATCACAGCAGCCAGCTTCAGTGGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGAGAATTCCCATTAGTTCATTCGTAACTGTAATCTAAAATTTTCC

mRNA sequence

ATGGAGAAGGGGAAAACGGTAATCTCCATCGCCCTTCTGCCCTCGACTCCTCAAAAATCAAGCAGAGGGAGTCTCAGCTCCTTTTCTCTCGAATTCTCAATTAGCTTCGCATTTCAAGGGCACACCCATTTGTTTTTTTCTTCCATCAACTTCCACTCCTCTCTCCACTCCACACCCTCGTCTTCTTCTTCCTTTCGGCTAGCAAAGAATTATTTTTGTAGTTTAAGCATGGGGGACAGTGAAACTATAGTTGCCCAAACATCTGAATTCATGAGGTATACATATGCTGGCTATGTTTCGAGTGGCTATGCTGATAGCAGTACAAATCTAATTCCTCATCCTGGCGTTTTTCTATCTGTGATCACTGGAGACTTTAAAGTTACACCTATGTATGCAGATATGAGTGATGGCAATGCGTATGTTACGGATCCCAATTCTATTCAGCAAGGAAATCATGTTGGTGAGGTAGATGAGGCGATGGTATCTGTAGGAGTGACTGACCATAGTCAGAATAATGCTGTATCAGAAAATTCAGCAATGGAAACTGCTGAAGTAGTCAGTCATGATTCTTCTTTAAATGGAAGTGTTGCAGCCATATCGGACAATGCCTTTTCTGTTGAGAACGGGAATGCTGTTGAGAATACCAACGAGGCTTCTGAGGAACAACACTTTGTTGATGGTTCTGTACCTCCATTATCTGCTGAAGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTCTAGATTTTAATGCTTGGACTTCTTTGATCGAAGAGACAGAGAAGGTGGCAGAGGATAACATACTCAAAATCCGGCGAGTTTATGATGCCTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGATCATGAGGCACGGTTTGGTTCAACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTGCATGGGGTCACCTACTCGGTTGATATTTGGCTGCATTATTGCATATTCACTCTTAGTACATATGGAGATCCAGAGACCATTAGAAGGCTTTTTGAGAGAGGATTAGCGTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATACGAGTACACGCAGCAGGAGTGGGGTCGACTGGCTATGATATACACACGTATACTAGAAAATCCAAATCAACAGTTGGATCGGTATTTCAATAGCTTCAAGGAGTTGGCTGCAAATCGGCCATTGTCAGAGTTGAAGAGTTCTGAGGAGGCTGTATTAGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAGGAAGGTCATCCTGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTAGACCACTAAATGTTGCAGAGCTTGATAATTGGCATAGTTACTTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTATCTTATCTTCCTAACCATCTGTCTGTCAGGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACTGAGGAGTATTTCTGTGGTGAAGTTATACGAGAGATGCGTTATTGCTTGTGCCAACTATCCTGAATACTGGGTTCGGTATATTTTATACATGCAAGCAAGCGACAGTATGGATCTTTCCAATAATGCGCTTGCTCGAGCAAGCCAAGTTTTTGTCAAGAGACGACCGGAGATCCATTTATTTTCTGCTCGGTTCAAGGAGCAGAACGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTCGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATAATTAAGCATGCTAATATGGAACATCGTCTGGGAAACCTGGAAGAGGCATACTCTGTATATGAACAGGCCATCGCCATCGAAAGAGGAAAAGAACATTCTCGTGCATTACCGCTGTTATATGCTCAGTACTCGAGATTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTTGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCGCTCATTGAGGCCTTGATTCATTTTGAGTCAATTCAGTCAGCAGCAAAGAGAATTGGTTATTTAGATTCATTAGTTGAGAAGGTCATAGTGCCCAATACAGAGAATGCATCGGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCAAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCGGAGGACAGACATGCAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCGCCAGCACAATCTGTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGCTTACAACCGCAAGCCTGGCCACCTGTTGCTCAAGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCCTCGTACAGTGGGTATGGAAGCACATACACGAATCCACCAGTGTCCACATCAGTGTCACAAGCCTCCACTTATGCGACCTATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCACAGAGTTACGCCCAACCGACTGCTCAAGCAACAATTACACCATCACAGCAGCCAGCTTCAGTGGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGAGAATTCCCATTAGTTCATTCGTAACTGTAATCTAAAATTTTCC

Coding sequence (CDS)

ATGGAGAAGGGGAAAACGGTAATCTCCATCGCCCTTCTGCCCTCGACTCCTCAAAAATCAAGCAGAGGGAGTCTCAGCTCCTTTTCTCTCGAATTCTCAATTAGCTTCGCATTTCAAGGGCACACCCATTTGTTTTTTTCTTCCATCAACTTCCACTCCTCTCTCCACTCCACACCCTCGTCTTCTTCTTCCTTTCGGCTAGCAAAGAATTATTTTTGTAGTTTAAGCATGGGGGACAGTGAAACTATAGTTGCCCAAACATCTGAATTCATGAGGTATACATATGCTGGCTATGTTTCGAGTGGCTATGCTGATAGCAGTACAAATCTAATTCCTCATCCTGGCGTTTTTCTATCTGTGATCACTGGAGACTTTAAAGTTACACCTATGTATGCAGATATGAGTGATGGCAATGCGTATGTTACGGATCCCAATTCTATTCAGCAAGGAAATCATGTTGGTGAGGTAGATGAGGCGATGGTATCTGTAGGAGTGACTGACCATAGTCAGAATAATGCTGTATCAGAAAATTCAGCAATGGAAACTGCTGAAGTAGTCAGTCATGATTCTTCTTTAAATGGAAGTGTTGCAGCCATATCGGACAATGCCTTTTCTGTTGAGAACGGGAATGCTGTTGAGAATACCAACGAGGCTTCTGAGGAACAACACTTTGTTGATGGTTCTGTACCTCCATTATCTGCTGAAGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTCTAGATTTTAATGCTTGGACTTCTTTGATCGAAGAGACAGAGAAGGTGGCAGAGGATAACATACTCAAAATCCGGCGAGTTTATGATGCCTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGATCATGAGGCACGGTTTGGTTCAACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTGCATGGGGTCACCTACTCGGTTGATATTTGGCTGCATTATTGCATATTCACTCTTAGTACATATGGAGATCCAGAGACCATTAGAAGGCTTTTTGAGAGAGGATTAGCGTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATACGAGTACACGCAGCAGGAGTGGGGTCGACTGGCTATGATATACACACGTATACTAGAAAATCCAAATCAACAGTTGGATCGGTATTTCAATAGCTTCAAGGAGTTGGCTGCAAATCGGCCATTGTCAGAGTTGAAGAGTTCTGAGGAGGCTGTATTAGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAGGAAGGTCATCCTGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTAGACCACTAAATGTTGCAGAGCTTGATAATTGGCATAGTTACTTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTATCTTATCTTCCTAACCATCTGTCTGTCAGGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACTGAGGAGTATTTCTGTGGTGAAGTTATACGAGAGATGCGTTATTGCTTGTGCCAACTATCCTGAATACTGGGTTCGGTATATTTTATACATGCAAGCAAGCGACAGTATGGATCTTTCCAATAATGCGCTTGCTCGAGCAAGCCAAGTTTTTGTCAAGAGACGACCGGAGATCCATTTATTTTCTGCTCGGTTCAAGGAGCAGAACGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTCGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATAATTAAGCATGCTAATATGGAACATCGTCTGGGAAACCTGGAAGAGGCATACTCTGTATATGAACAGGCCATCGCCATCGAAAGAGGAAAAGAACATTCTCGTGCATTACCGCTGTTATATGCTCAGTACTCGAGATTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTTGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCGCTCATTGAGGCCTTGATTCATTTTGAGTCAATTCAGTCAGCAGCAAAGAGAATTGGTTATTTAGATTCATTAGTTGAGAAGGTCATAGTGCCCAATACAGAGAATGCATCGGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCAAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCGGAGGACAGACATGCAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCGCCAGCACAATCTGTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGCTTACAACCGCAAGCCTGGCCACCTGTTGCTCAAGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCCTCGTACAGTGGGTATGGAAGCACATACACGAATCCACCAGTGTCCACATCAGTGTCACAAGCCTCCACTTATGCGACCTATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCACAGAGTTACGCCCAACCGACTGCTCAAGCAACAATTACACCATCACAGCAGCCAGCTTCAGTGGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGA

Protein sequence

MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPSSSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Homology
BLAST of Carg03790 vs. NCBI nr
Match: KAG7025249.1 (Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1822.8 bits (4720), Expect = 0.0e+00
Identity = 938/938 (100.00%), Postives = 938/938 (100.00%), Query Frame = 0

Query: 1   MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPS 60
           MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPS
Sbjct: 1   MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPS 60

Query: 61  SSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSV 120
           SSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSV
Sbjct: 61  SSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSV 120

Query: 121 ITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAM 180
           ITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAM
Sbjct: 121 ITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAM 180

Query: 181 ETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLW 240
           ETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLW
Sbjct: 181 ETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLW 240

Query: 241 NIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFG 300
           NIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFG
Sbjct: 241 NIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFG 300

Query: 301 STDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPL 360
           STDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPL
Sbjct: 301 STDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPL 360

Query: 361 WDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLD 420
           WDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLD
Sbjct: 361 WDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLD 420

Query: 421 VQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGF 480
           VQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGF
Sbjct: 421 VQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGF 480

Query: 481 ETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGL 540
           ETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGL
Sbjct: 481 ETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGL 540

Query: 541 SILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE 600
           SILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE
Sbjct: 541 SILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE 600

Query: 601 IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA 660
           IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA
Sbjct: 601 IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA 660

Query: 661 IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES 720
           IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES
Sbjct: 661 IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES 720

Query: 721 IQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR 780
           IQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR
Sbjct: 721 IQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR 780

Query: 781 HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG 840
           HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG
Sbjct: 781 HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG 840

Query: 841 LQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQ 900
           LQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQ
Sbjct: 841 LQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQ 900

Query: 901 QAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 939
           QAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 901 QAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 938

BLAST of Carg03790 vs. NCBI nr
Match: XP_023514088.1 (pre-mRNA-processing factor 39-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1590.5 bits (4117), Expect = 0.0e+00
Identity = 822/862 (95.36%), Postives = 826/862 (95.82%), Query Frame = 0

Query: 77  MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
           MGDSETIVAQTSEFMRYT AGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTP+YADMSD
Sbjct: 1   MGDSETIVAQTSEFMRYTSAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPIYADMSD 60

Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
           GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV
Sbjct: 61  GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 120

Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
           AA+ DNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL
Sbjct: 121 AAVLDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 180

Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
           TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 300

Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
           LAMIYTRILENPNQQLDRY+NSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYYNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 360

Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
           DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
           AELDNWHSYLDFIEQEGDLNK                               VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480

Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
           VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA
Sbjct: 481 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 540

Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
           GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 600

Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
           YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVE 660

Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
           KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFIS KSTSELKK
Sbjct: 661 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISRKSTSELKK 720

Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
           RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780

Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
           WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV QQAYSAQSYAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV-QQAYSAQSYAQPTAQAT 830

Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
           ITPSQQPASVAQPYYGSYYMNG
Sbjct: 841 ITPSQQPASVAQPYYGSYYMNG 830

BLAST of Carg03790 vs. NCBI nr
Match: XP_023004937.1 (pre-mRNA-processing factor 39 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1582.4 bits (4096), Expect = 0.0e+00
Identity = 819/862 (95.01%), Postives = 826/862 (95.82%), Query Frame = 0

Query: 77  MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
           MGDSETIVAQTSEF+RYT AG VSSGYADSSTNLI +PGVFLSVITGDFKVTP+YADMSD
Sbjct: 1   MGDSETIVAQTSEFIRYTSAGCVSSGYADSSTNLISYPGVFLSVITGDFKVTPIYADMSD 60

Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
           GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV
Sbjct: 61  GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 120

Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
           AA+SDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL
Sbjct: 121 AAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 180

Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
           TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 300

Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
           LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 360

Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
           DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
           AELDNWHSYLDFIEQEGDLNK                               VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480

Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
           VIACANYPEYWVRYILYMQASDSMDLSN+ALARASQVFVKRRPEIHLFSARFKEQNGDIA
Sbjct: 481 VIACANYPEYWVRYILYMQASDSMDLSNDALARASQVFVKRRPEIHLFSARFKEQNGDIA 540

Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
           GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 600

Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
           YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVE 660

Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
           KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK
Sbjct: 661 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 720

Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
           RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780

Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
           WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV QQAYSAQSYAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV-QQAYSAQSYAQPTAQAT 830

Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
           ITPSQQPASVAQPYYGSYYMNG
Sbjct: 841 ITPSQQPASVAQPYYGSYYMNG 830

BLAST of Carg03790 vs. NCBI nr
Match: XP_038876250.1 (pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida] >XP_038876251.1 pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida])

HSP 1 Score: 1497.6 bits (3876), Expect = 0.0e+00
Identity = 770/862 (89.33%), Postives = 789/862 (91.53%), Query Frame = 0

Query: 77  MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
           MGDSET+VAQTSE MRY   GYVSSGYADSSTNLIPHPG F SVITGD+ V+   ADM D
Sbjct: 1   MGDSETVVAQTSEVMRYASGGYVSSGYADSSTNLIPHPGAFQSVITGDYSVSHTSADMGD 60

Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
           GNAYVTDPNS QQGNHV EVDE    V VTDHSQN AVSENSAMET  V  HDSSLNG+V
Sbjct: 61  GNAYVTDPNSTQQGNHVVEVDETKADVVVTDHSQNAAVSENSAMETVPVAGHDSSLNGNV 120

Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
           AA S N  SVENGN VEN NEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSL
Sbjct: 121 AAESVNTSSVENGNIVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
           IEETEKVAEDNILKIRRVYD+FLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
           TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
           LAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSE+AV+DVQSEAGDQVNGEE HP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEQAVVDVQSEAGDQVNGEEDHP 360

Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
           DA EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DAAEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
           AELDNWHSYLDFIEQEGDLNK                               VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480

Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
           VIACANYPEYW+RYIL MQA+DSMDL+NNALARASQVFVKRRPEIHLF+ARFKEQNGD+A
Sbjct: 481 VIACANYPEYWIRYILCMQATDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDVA 540

Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
           GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLE+AYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLL 600

Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
           YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQS AKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTAKRIDYLDSLVE 660

Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
           KVIVPNTENA+V SASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK
Sbjct: 661 KVIVPNTENATVASASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 720

Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
           RLADDYLASEKAKMAKSYP VASPAQS+MG YPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPGVASPAQSLMGVYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780

Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
           WAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPTYP QQQAY+AQSYAQPTAQ T
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYTAQSYAQPTAQTT 831

Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
           I PSQQPASVAQPYYGSYYMNG
Sbjct: 841 IAPSQQPASVAQPYYGSYYMNG 831

BLAST of Carg03790 vs. NCBI nr
Match: KAG6592841.1 (Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1496.5 bits (3873), Expect = 0.0e+00
Identity = 772/806 (95.78%), Postives = 774/806 (96.03%), Query Frame = 0

Query: 133 DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 192
           DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL
Sbjct: 33  DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 92

Query: 193 NGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 252
           NGSVAA+SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA
Sbjct: 93  NGSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 152

Query: 253 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 312
           WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA
Sbjct: 153 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 212

Query: 313 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 372
           VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ
Sbjct: 213 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 272

Query: 373 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 432
           EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE
Sbjct: 273 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 332

Query: 433 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 492
           EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR
Sbjct: 333 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 392

Query: 493 PLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKL 552
           PLNVAELDNWHSYLDFIEQEGDLNK                               VVKL
Sbjct: 393 PLNVAELDNWHSYLDFIEQEGDLNK-------------------------------VVKL 452

Query: 553 YERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQN 612
           YERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQN
Sbjct: 453 YERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQN 512

Query: 613 GDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRA 672
           GDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRA
Sbjct: 513 GDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRA 572

Query: 673 LPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLD 732
           LPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRI YLD
Sbjct: 573 LPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLD 632

Query: 733 SLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTS 792
           SLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTS
Sbjct: 633 SLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTS 692

Query: 793 ELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQA 852
           ELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQA
Sbjct: 693 ELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQA 752

Query: 853 QGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPT 912
           QGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQAS+YATYPPTYPVQQQAYSAQSYAQPT
Sbjct: 753 QGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPTYPVQQQAYSAQSYAQPT 807

Query: 913 AQATITPSQQPASVAQPYYGSYYMNG 939
           AQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 813 AQATITPSQQPASVAQPYYGSYYMNG 807

BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match: Q4KLU2 (Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.2e-69
Identity = 188/595 (31.60%), Postives = 295/595 (49.58%), Query Frame = 0

Query: 229 VPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGY 288
           +PPL  + ++ W  V+A   DFN WT L++  E+  E+++   R+ +DAFLA +P CYGY
Sbjct: 49  LPPLPPDFEKYWKSVQAYPEDFNTWTYLLQYVEQ--ENHLFAARKAFDAFLAHYPYCYGY 108

Query: 289 WKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIRRL 348
           WKKYAD E +  +  +  EVY R +  +T SVD+W+HY  F   T    DPE   T+R  
Sbjct: 109 WKKYADLEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFLKETLDPADPETSLTLRGT 168

Query: 349 FERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELA 408
           FE  +   G D+ S  LW+ YI +E  Q     +  IY+R+L  P Q    +F  FKE  
Sbjct: 169 FEHAVVSAGLDFRSDKLWEMYINWETEQGNLSGVTSIYSRLLGIPTQFYSLHFQRFKEHI 228

Query: 409 ANRPLSELKSSEEAV------LDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEEL- 468
                 E  +SE+ +        +    G   +   G  +  +P+ +T     TE E + 
Sbjct: 229 QGHLPREFLTSEKFIELRKELASMTLHGGTNDDIPSGLEEIKDPAKRT-----TEVENMR 288

Query: 469 EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLN 528
            + I + +EI+   +   SKI  FE  I+RPYFHV+PL  A+L+NW  YL+F  + G   
Sbjct: 289 HRIIEVHQEIFNLNEHEVSKIWNFEEEIKRPYFHVKPLEKAQLNNWKEYLEFELENGSNE 348

Query: 529 KVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQA 588
           +                               +V L+ERCVIACA Y E+W++Y  YM+ 
Sbjct: 349 R-------------------------------IVILFERCVIACACYEEFWIKYAKYME- 408

Query: 589 SDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEA 648
           + S++   +   RA  V + ++P +HL  A F+EQ G++  AR   + + T I  GL   
Sbjct: 409 NHSVEGVRHVYNRACHVHLAKKPMVHLLWAAFEEQQGNLEEARRILKNIETAIE-GLAMV 468

Query: 649 IIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYA-QYSRFLNLVCKNEGKAR 708
            ++  N+E R GN++EA  + E+A+     K  + +    YA + +R L  V  N  KAR
Sbjct: 469 RLRRVNLERRHGNVKEAEHLLEEAM----NKTKTSSESSFYAIKLARHLFKVQANVVKAR 528

Query: 709 EILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMRE 768
           ++L  A++  + +  L   L+  E      +    + +  +K I       S +S +MR 
Sbjct: 529 KVLSNAIQKDKENTKLYLNLLEMEYNCDIKQNEENILAAFDKAI------KSPMSIAMRV 588

Query: 769 ELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAK 810
           + S   +EFL  FG DV  +    + H KL + H+   ++ KR A++ L   +AK
Sbjct: 589 KFSQRKVEFLEDFGSDVNKLLDTYNEHQKL-LKHQ---DIVKRKAENGLEQPEAK 589

BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match: Q1JPZ7 (Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 2.5e-66
Identity = 202/687 (29.40%), Postives = 321/687 (46.72%), Query Frame = 0

Query: 200 SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEE 259
           S++  ++E  +A +   E + E        P L  E +RL  +V  N  DFN W  L++ 
Sbjct: 116 SESPSNMELEDAPKEPAEPAAEADPAAPQEPELPTEYERLSKVVEDNPEDFNGWVYLLQY 175

Query: 260 TEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYS 319
            E+  E+++L  R+ +DAF   +P CYGYWKKYAD E + G      EVY R +  +  S
Sbjct: 176 VEQ--ENHLLGSRKAFDAFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLS 235

Query: 320 VDIWLHYCIFTL----STYGDPET-IRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEW 379
           VD+WLHY  F      ++ G+ E+ IR  +E  +   GTD+ S  LW+ YI +E  Q + 
Sbjct: 236 VDLWLHYITFLRENQDTSDGEAESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKL 295

Query: 380 GRLAMIYTRILENPNQQLDRYFNSFKE-LAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 439
             +  IY R+L  P Q   ++F  FK+ + +N P   L   E   L V+    ++ +G+E
Sbjct: 296 ANVTAIYDRLLCIPTQLYSQHFQKFKDHVQSNNPKHFLSEEEFVSLRVELANANKPSGDE 355

Query: 440 -------------GHPDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIG 499
                        G  D  +P+ +     +TE E +  K I  R+E++   +   SK   
Sbjct: 356 DAETEAPGEELPPGTEDLPDPAKR-----VTEIENMRHKVIETRQEMFNHNEHEVSKRWA 415

Query: 500 FETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRG 559
           FE  I+RPYFHV+ L   +L+NW  YLDF  + G   +                      
Sbjct: 416 FEEGIKRPYFHVKALEKTQLNNWREYLDFELENGTPER---------------------- 475

Query: 560 LSILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRP 619
                    VV L+ERC+IACA Y E+W++Y  Y++ S S +   +   +A  V + ++P
Sbjct: 476 ---------VVVLFERCLIACALYEEFWIKYAKYLE-SYSTEAVRHIYKKACTVHLPKKP 535

Query: 620 EIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQ 679
            +HL  A F+EQ G I  AR+  + V   + PGL    ++  ++E R GN+EEA ++ + 
Sbjct: 536 NVHLLWAAFEEQQGSIDEARSILKAVEVSV-PGLAMVRLRRVSLERRHGNMEEAEALLQD 595

Query: 680 AIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE 739
           AI   R    S        + +R L  V K+ G+A+++L +AVE  E +  L   L+  E
Sbjct: 596 AITNGRNSSES---SFYSVKLARQLVKVQKSIGRAKKVLLEAVEKDETNPKLYLNLLELE 655

Query: 740 SIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFG-DVQSIKKAE 799
                 +    + +  ++ +  +    S ++ S R+      ++FL  FG D+ ++  A 
Sbjct: 656 YSGDVQQNEAEIIACFDRALSSSMALESRITFSQRK------VDFLEDFGSDINTLMAAY 715

Query: 800 DRHAKLFISHKSTSELKKRLADDYLASEKAKMAKS-YPSVASPAQSVMGAYPTG------ 849
           ++H +L    +S     KR A++      AK  ++   SVAS     M A   G      
Sbjct: 716 EQHQRLLAEQESF----KRKAENGSEEPDAKRQRTDDQSVASGQMMDMQANHAGYNYNNW 749

BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match: Q86UA1 (Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3)

HSP 1 Score: 245.7 bits (626), Expect = 2.0e-63
Identity = 199/688 (28.92%), Postives = 316/688 (45.93%), Query Frame = 0

Query: 172 NAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVD----- 231
           N+ + ++   +  VV H +  +  +  +++   S ++   V  + E +E    VD     
Sbjct: 11  NSSNGSTGNSSEVVVEHPTDFSTEIMNVTEMEQSPDDSPNVNASTEETEMASAVDLPVTL 70

Query: 232 ----GSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEF 291
                + PP   E ++ W  V  N  DF  W  L++  E+  E++++  R+ +D F   +
Sbjct: 71  TETEANFPP---EYEKFWKTVENNPQDFTGWVYLLQYVEQ--ENHLMAARKAFDRFFIHY 130

Query: 292 PLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE-- 351
           P CYGYWKKYAD E R  +     EVY R +  +  SVD+W+HY  F   T   GDPE  
Sbjct: 131 PYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETN 190

Query: 352 -TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFN 411
            TIR  FE  +   GTD+ S  LW+ YI +E  Q     +  IY RIL  P Q    +F 
Sbjct: 191 NTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQ 250

Query: 412 SFKELAANRPLSELKSSEEAV-LDVQSEAGDQVNGEEGHP---------DATEPSSKTVS 471
            FKE   N    +L + E+ + L  +  + +  +G++G P         D T+P+     
Sbjct: 251 RFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL--- 310

Query: 472 AGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYL 531
             +TE E +  + I I +E++   +   SK   FE  I+RPYFHV+PL  A+L NW  YL
Sbjct: 311 --ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL 370

Query: 532 DFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEY 591
           +F  + G   +                               VV L+ERCVI+CA Y E+
Sbjct: 371 EFEIENGTHER-------------------------------VVVLFERCVISCALYEEF 430

Query: 592 WVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVH 651
           W++Y  YM+ + S++   +  +RA  + + ++P +H+  A F+EQ G+I  AR +     
Sbjct: 431 WIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLWAAFEEQQGNINEAR-NILKTF 490

Query: 652 TEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYA-QYSRFLN 711
            E   GL    ++  ++E R GNLEEA  + + AI   +    S      YA + +R L 
Sbjct: 491 EECVLGLAMVRLRRVSLERRHGNLEEAEHLLQDAIKNAKSNNESS----FYAVKLARHLF 550

Query: 712 LVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTEN 771
            + KN  K+R++L +A+E  + +  L   L+  E      +    + +  +K +      
Sbjct: 551 KIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDLKQNEENILNCFDKAV------ 610

Query: 772 ASVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLA 831
              +   MR   S   +EFL  FG DV  +  A D H  L     S     KR A++   
Sbjct: 611 HGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDSL----KRKAENGSE 641

Query: 832 SEKAKMAKSYPSVASPAQSVMGAYPTGQ 833
             + K A +  + +S  Q + G     Q
Sbjct: 671 EPEEKKAHTEDTTSSSTQMIDGDLQANQ 641

BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match: Q8K2Z2 (Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3)

HSP 1 Score: 237.7 bits (605), Expect = 5.5e-61
Identity = 206/690 (29.86%), Postives = 316/690 (45.80%), Query Frame = 0

Query: 176 ENSAMETAEVVSHDSSLNGS-VAAISDNAFSVE--NGNAVENTNEASEEQHF-------- 235
           +NS ME      + S+ N S VA +    FS E  N   +E + +AS   H         
Sbjct: 2   QNSHMEEYRNSDNGSTGNSSEVAVVEHPDFSTEIMNVTEMEQSPDASPSAHASTEENEMA 61

Query: 236 ---------VDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVY 295
                     +G  PP   E ++ W  V  N  DF  W  L++  E+  E++++  R+ +
Sbjct: 62  NAVNLPVTEAEGDFPP---EFEKFWKTVEMNPQDFTGWVYLLQYVEQ--ENHLMAARKAF 121

Query: 296 DAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY- 355
           D F   +P CYGYWKKYAD E R  +  +  EVY R +  +  SVD+W+HY  F   T  
Sbjct: 122 DKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLE 181

Query: 356 -GDPE---TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQ 415
            GD E   TIR  FE  +   GTD+ S  LW+ YI +E  Q     +  +Y RIL  P Q
Sbjct: 182 PGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQ 241

Query: 416 QLDRYFNSFKELAANRPLSELKSSEEAV-LDVQSEAGDQVNGEEGHPDATEPSS-KTVSA 475
               +F  FKE   N    +L + E+ + L  +  + +  +G++G P    PS  + +S 
Sbjct: 242 LYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDISP 301

Query: 476 G--LTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAE-LDNWHS 535
              +TE E +  + I I +E++   +   SK   FE  I+RPYFHV+PL  A+   NW  
Sbjct: 302 AKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQPKKNWKE 361

Query: 536 YLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYP 595
           YL+F  + G   +                               VV L+ERCVI+CA Y 
Sbjct: 362 YLEFEIENGTHER-------------------------------VVVLFERCVISCALYE 421

Query: 596 EYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQL 655
           E+W++Y  YM+ + S++   +  +RA  V + ++P  H+  A F+EQ G+I  AR   + 
Sbjct: 422 EFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILR- 481

Query: 656 VHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYA-QYSRF 715
              E   GL    ++  ++E R GN+EEA  + + AI   +    S      YA + +R 
Sbjct: 482 TFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESS----FYAIKLARH 541

Query: 716 LNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNT 775
           L  + KN  K+R++L +A+E  + +  L   L+  E      +    + +  +K I    
Sbjct: 542 LFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAI---- 601

Query: 776 ENASVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDY 833
                +   MR   S   +EFL  FG DV  +  A D H  L    K    LK++  +  
Sbjct: 602 --HGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLL---KEQDTLKRKAEN-- 637

BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match: O74970 (Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp39 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-60
Identity = 155/473 (32.77%), Postives = 233/473 (49.26%), Query Frame = 0

Query: 235 EEDRLWNIVRANSLDFNAWTSLIEETEKV--------AEDNILKIRRVYDAFLAEFPLCY 294
           E D+    +  N  DF+AW  L+  +E +        ++  I  +R VYD FL ++PL +
Sbjct: 13  EWDKYNRQINKNPDDFDAWEGLVRASEHLEGGVGRNSSKQAINTLRSVYDRFLGKYPLLF 72

Query: 295 GYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFER 354
           GYWKKYAD E      +    +YER + G+ +SVD+W +YC F + T GD   +R LF +
Sbjct: 73  GYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFKMETNGDANEVRELFMQ 132

Query: 355 GLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANR 414
           G   VG D+LS P WDKY+E+E  Q+    +  +  R++  P  Q  RYF  F +++ ++
Sbjct: 133 GANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIHIPLHQYARYFERFVQVSQSQ 192

Query: 415 PLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEE--LEKYIAIRE 474
           P+ +L        DV +     V  E     +      TV  G  E E     +   I  
Sbjct: 193 PIQQLLPP-----DVLASIRADVTREPAKVVSAGSKQITVERGELEIEREMRARIYNIHL 252

Query: 475 EIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNH 534
           +I++K +   +K   FE+ I+RPYFHV+ L+ A+L NW  YLDF E EGD  ++ +    
Sbjct: 253 QIFQKVQLETAKRWTFESEIKRPYFHVKELDEAQLVNWRKYLDFEEVEGDFQRICH---- 312

Query: 535 LSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQAS-DSMDLS 594
                                      LYERC+I CA Y E+W RY  +M A  D ++  
Sbjct: 313 ---------------------------LYERCLITCALYDEFWFRYARWMSAQPDHLNDV 372

Query: 595 NNALARASQVFVK-RRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHAN 654
           +    RAS +F    RP I +  A F+E  G+IA A+A YQ + T++ PG LEA++    
Sbjct: 373 SIIYERASCIFASISRPGIRVQYALFEESQGNIASAKAIYQSILTQL-PGNLEAVLGWVG 432

Query: 655 MEHRLG---NLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEG 693
           +E R     +L  A++V      I  GK ++    +L  +    + LV K EG
Sbjct: 433 LERRNAPNYDLTNAHAVLRS--IINEGKCNTGITEVLITE---DIKLVWKIEG 443

BLAST of Carg03790 vs. ExPASy TrEMBL
Match: A0A6J1KRS7 (pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)

HSP 1 Score: 1582.4 bits (4096), Expect = 0.0e+00
Identity = 819/862 (95.01%), Postives = 826/862 (95.82%), Query Frame = 0

Query: 77  MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
           MGDSETIVAQTSEF+RYT AG VSSGYADSSTNLI +PGVFLSVITGDFKVTP+YADMSD
Sbjct: 1   MGDSETIVAQTSEFIRYTSAGCVSSGYADSSTNLISYPGVFLSVITGDFKVTPIYADMSD 60

Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
           GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV
Sbjct: 61  GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 120

Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
           AA+SDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL
Sbjct: 121 AAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 180

Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
           TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 300

Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
           LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 360

Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
           DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
           AELDNWHSYLDFIEQEGDLNK                               VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480

Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
           VIACANYPEYWVRYILYMQASDSMDLSN+ALARASQVFVKRRPEIHLFSARFKEQNGDIA
Sbjct: 481 VIACANYPEYWVRYILYMQASDSMDLSNDALARASQVFVKRRPEIHLFSARFKEQNGDIA 540

Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
           GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 600

Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
           YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVE 660

Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
           KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK
Sbjct: 661 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 720

Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
           RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780

Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
           WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV QQAYSAQSYAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV-QQAYSAQSYAQPTAQAT 830

Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
           ITPSQQPASVAQPYYGSYYMNG
Sbjct: 841 ITPSQQPASVAQPYYGSYYMNG 830

BLAST of Carg03790 vs. ExPASy TrEMBL
Match: A0A1S3CBE2 (pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 1493.0 bits (3864), Expect = 0.0e+00
Identity = 768/862 (89.10%), Postives = 790/862 (91.65%), Query Frame = 0

Query: 77  MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
           MGDSET+VAQTSE M Y  AGYVSSGYADSSTN+IPHPG F SVITGDF V+   ADM D
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
           GNAYVTDPNS+QQGNHV EVDE    V VTDHSQN AVSENSAMETA +V HDSS+NGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
           A  S NA SVENGN VEN NEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
           TYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
           LAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSEEAV+DVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
           +A+EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
           AELDNWHSYLDFIEQEGDLNK                               VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480

Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
           VIACANYPEYW+RYIL MQASDSMDL+NNALARASQVFVKRRPEIHLF+ARFKEQNGDI 
Sbjct: 481 VIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDIT 540

Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
           GARASYQLVH+EISPGLLEAIIKHANMEHRLGNLE+AYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLL 600

Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
           YAQYSRF NLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQS  KRI YLDSLVE
Sbjct: 601 YAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRIDYLDSLVE 660

Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
           KVIVPNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRH KLFISHKSTSELKK
Sbjct: 661 KVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISHKSTSELKK 720

Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
           RLADDYLASEKAKMAKSYPSVASPAQS+MG YPTGQNQWAASYG+QPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQ 780

Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
           WAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPTYP QQQAYSAQ+YAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQTYAQPTAQAT 831

Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
           + PSQQ ASVAQPYYGSYYMNG
Sbjct: 841 VAPSQQTASVAQPYYGSYYMNG 831

BLAST of Carg03790 vs. ExPASy TrEMBL
Match: A0A6J1L0W1 (pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)

HSP 1 Score: 1490.7 bits (3858), Expect = 0.0e+00
Identity = 769/805 (95.53%), Postives = 773/805 (96.02%), Query Frame = 0

Query: 134 MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 193
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 194 GSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 253
           GSVAA+SDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 254 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 313
           TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 314 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 373
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 374 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 433
           WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 434 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 493
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 494 LNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLY 553
           LNVAELDNWHSYLDFIEQEGDLNK                               VVKLY
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNK-------------------------------VVKLY 420

Query: 554 ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNG 613
           ERCVIACANYPEYWVRYILYMQASDSMDLSN+ALARASQVFVKRRPEIHLFSARFKEQNG
Sbjct: 421 ERCVIACANYPEYWVRYILYMQASDSMDLSNDALARASQVFVKRRPEIHLFSARFKEQNG 480

Query: 614 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 673
           DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL
Sbjct: 481 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 540

Query: 674 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDS 733
           PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDS
Sbjct: 541 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDS 600

Query: 734 LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 793
           LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE
Sbjct: 601 LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 660

Query: 794 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 853
           LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ
Sbjct: 661 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 720

Query: 854 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 913
           GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA
Sbjct: 721 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 774

Query: 914 QATITPSQQPASVAQPYYGSYYMNG 939
           QATITPSQQPASVAQPYYGSYYMNG
Sbjct: 781 QATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Carg03790 vs. ExPASy TrEMBL
Match: A0A6J1H6A4 (pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846 PE=4 SV=1)

HSP 1 Score: 1489.6 bits (3855), Expect = 0.0e+00
Identity = 769/805 (95.53%), Postives = 770/805 (95.65%), Query Frame = 0

Query: 134 MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 193
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 194 GSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 253
           GSVAA+SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 254 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 313
           TSLIEETEKVAEDNIL IRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILNIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 314 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 373
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 374 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 433
           WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 434 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 493
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 494 LNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLY 553
           LNVAELDNWHSYLDFIEQEGDLNK                               VVKLY
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNK-------------------------------VVKLY 420

Query: 554 ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNG 613
           ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFS RFKEQNG
Sbjct: 421 ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSGRFKEQNG 480

Query: 614 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 673
           DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL
Sbjct: 481 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 540

Query: 674 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDS 733
           PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRI YLDS
Sbjct: 541 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLDS 600

Query: 734 LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 793
           LVEKVIV NTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE
Sbjct: 601 LVEKVIVSNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 660

Query: 794 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 853
           LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ
Sbjct: 661 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 720

Query: 854 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 913
           GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA
Sbjct: 721 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 774

Query: 914 QATITPSQQPASVAQPYYGSYYMNG 939
           QATITPSQQPASVAQPYYGSYYMNG
Sbjct: 781 QATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Carg03790 vs. ExPASy TrEMBL
Match: A0A1S3CBV2 (pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 1486.9 bits (3848), Expect = 0.0e+00
Identity = 767/862 (88.98%), Postives = 789/862 (91.53%), Query Frame = 0

Query: 77  MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
           MGDSET+VAQTSE M Y  AGYVSSGYADSSTN+IPHPG F SVITGDF V+   ADM D
Sbjct: 1   MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60

Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
           GNAYVTDPNS+QQGNHV EVDE    V VTDHSQN AVSENSAMETA +V HDSS+NGSV
Sbjct: 61  GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120

Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
           A  S NA SVENGN VEN NEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180

Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
           IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240

Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
           TYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300

Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
           LAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSEEAV+DVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360

Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
           +A+EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420

Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
           AELDNWHSYLDFIEQEGDLNK                               VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480

Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
           VIACANYPEYW+RYIL MQASDSMDL+NNALARASQVFVKRRPEIHLF+ARFKEQNGDI 
Sbjct: 481 VIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDIT 540

Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
           GARASYQLVH+EISPGLLEAIIKHANMEHRLGNLE+AYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLL 600

Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
           YAQYSRF NLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQS  KRI YLDSLVE
Sbjct: 601 YAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRIDYLDSLVE 660

Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
           KVIVPNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRH KLFISHKSTSELKK
Sbjct: 661 KVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISHKSTSELKK 720

Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
           RLADDYLASEKAKMAKSYPSVASPAQS+MG YPTGQNQWAASYG+QPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQ 780

Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
           WAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPTYP  QQAYSAQ+YAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA-QQAYSAQTYAQPTAQAT 830

Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
           + PSQQ ASVAQPYYGSYYMNG
Sbjct: 841 VAPSQQTASVAQPYYGSYYMNG 830

BLAST of Carg03790 vs. TAIR 10
Match: AT1G04080.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 885.9 bits (2288), Expect = 2.7e-257
Identity = 481/828 (58.09%), Postives = 587/828 (70.89%), Query Frame = 0

Query: 158 EAMVSVGVT-----DHSQNNAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAV 217
           EAMVS G T     D++ + A  E++  ETA +V    S+N    ++ +    VENG+A 
Sbjct: 5   EAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNND--SLVNGTAPVENGSAT 64

Query: 218 ENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIR 277
           +N    +      D +   LS EE+RLWNIVRANSL+FNAWT+LI+ETE++A+DNI KIR
Sbjct: 65  DNVAVTAPAAEHGDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNIAKIR 124

Query: 278 RVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLS 337
           +VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++
Sbjct: 125 KVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFAIN 184

Query: 338 TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQL 397
           TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q L
Sbjct: 185 TYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNL 244

Query: 398 DRYFNSFKELAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATE 457
           DRYF+SFKELA  RPLSEL+S+EE   A + V  +A +    E G            +TE
Sbjct: 245 DRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTE 304

Query: 458 PSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD 517
            S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+
Sbjct: 305 QSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELE 364

Query: 518 NWHSYLDFIEQEGDLNKVS-----------------YLPNHLSVRQGGSLISYLRGLSIL 577
           NWH+YLDFIE++GD NK+S                 +       +   S+ S +    + 
Sbjct: 365 NWHNYLDFIERDGDFNKLSSIWCIICLIGFPLDQATFKWEITETKACASICSNVINAGVF 424

Query: 578 L-------RSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVK 637
           L          SVVKLYERCV+ CANYPEYW+RY+  M+AS S DL+ NALARA+QVFVK
Sbjct: 425 LTFCLSGKEGPSVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVK 484

Query: 638 RRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSV 697
           ++PEIHLF+AR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANME+RLGNL++A+S+
Sbjct: 485 KQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSL 544

Query: 698 YEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALI 757
           YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EALI
Sbjct: 545 YEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALI 604

Query: 758 HFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKK 817
           HFE+IQ   + I YL+ LVEKVI P+ +  ++ S++ REELS I++EFL +FGDV+SIKK
Sbjct: 605 HFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKK 664

Query: 818 AEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWA 877
           AED+H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ V  AYP  Q QW+
Sbjct: 665 AEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWS 724

Query: 878 ASYGLQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPPVSTSVSQASTYAT 936
             Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT P   T V QA+ Y  
Sbjct: 725 GGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGA 784

BLAST of Carg03790 vs. TAIR 10
Match: AT1G04080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 884.8 bits (2285), Expect = 6.1e-257
Identity = 476/804 (59.20%), Postives = 576/804 (71.64%), Query Frame = 0

Query: 158 EAMVSVGVT-----DHSQNNAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAV 217
           EAMVS G T     D++ + A  E++  ETA +V    S+N    ++ +    VENG+A 
Sbjct: 5   EAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNND--SLVNGTAPVENGSAT 64

Query: 218 ENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIR 277
           +N    +      D +   LS EE+RLWNIVRANSL+FNAWT+LI+ETE++A+DNI KIR
Sbjct: 65  DNVAVTAPAAEHGDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNIAKIR 124

Query: 278 RVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLS 337
           +VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++
Sbjct: 125 KVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFAIN 184

Query: 338 TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQL 397
           TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q L
Sbjct: 185 TYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNL 244

Query: 398 DRYFNSFKELAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATE 457
           DRYF+SFKELA  RPLSEL+S+EE   A + V  +A +    E G            +TE
Sbjct: 245 DRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTE 304

Query: 458 PSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD 517
            S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+
Sbjct: 305 QSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELE 364

Query: 518 NWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIAC 577
           NWH+YLDFIE++GD NK                               VVKLYERCV+ C
Sbjct: 365 NWHNYLDFIERDGDFNK-------------------------------VVKLYERCVVTC 424

Query: 578 ANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARA 637
           ANYPEYW+RY+  M+AS S DL+ NALARA+QVFVK++PEIHLF+AR KEQNGDIAGARA
Sbjct: 425 ANYPEYWIRYVTNMEASGSADLAENALARATQVFVKKQPEIHLFAARLKEQNGDIAGARA 484

Query: 638 SYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQY 697
           +YQLVH+EISPGLLEA+IKHANME+RLGNL++A+S+YEQ IA+E+GKEHS  LPLLYAQY
Sbjct: 485 AYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGKEHSTILPLLYAQY 544

Query: 698 SRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIV 757
           SRF  LV ++  KAR I+ +A++H + SKPL+EALIHFE+IQ   + I YL+ LVEKVI 
Sbjct: 545 SRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPREIDYLEPLVEKVIK 604

Query: 758 PNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLAD 817
           P+ +  ++ S++ REELS I++EFL +FGDV+SIKKAED+H KLF  H+STSELKKR AD
Sbjct: 605 PDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYPHRSTSELKKRSAD 664

Query: 818 DYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPP--VAQAQGQQWA 877
           D+LAS++ KMAK+Y +   PAQ V  AYP  Q QW+  Y  QPQ WPP   A AQ QQW 
Sbjct: 665 DFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWPPAQAAPAQPQQWN 724

Query: 878 PGYTQSASYSGYG---STYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQA 936
           P Y Q A+Y  YG   + YT P   T V QA+ Y  YP       Q Y  QSYA P A A
Sbjct: 725 PAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQTYPTQSYAPPVAAA 768

BLAST of Carg03790 vs. TAIR 10
Match: AT1G04080.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 667.2 bits (1720), Expect = 2.0e-191
Identity = 362/615 (58.86%), Postives = 436/615 (70.89%), Query Frame = 0

Query: 342 RLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKE 401
           RLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q LDRYF+SFKE
Sbjct: 6   RLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNLDRYFSSFKE 65

Query: 402 LAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATEPSSKTVSAG 461
           LA  RPLSEL+S+EE   A + V  +A +    E G            +TE S K  SA 
Sbjct: 66  LAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTEQSPKLESAS 125

Query: 462 LTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFI 521
            TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+NWH+YLDFI
Sbjct: 126 STEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELENWHNYLDFI 185

Query: 522 EQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVR 581
           E++GD NK                               VVKLYERCV+ CANYPEYW+R
Sbjct: 186 ERDGDFNK-------------------------------VVKLYERCVVTCANYPEYWIR 245

Query: 582 YILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEI 641
           Y+  M+AS S DL+ NALARA+QVFVK++PEIHLF+AR KEQNGDIAGARA+YQLVH+EI
Sbjct: 246 YVTNMEASGSADLAENALARATQVFVKKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEI 305

Query: 642 SPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCK 701
           SPGLLEA+IKHANME+RLGNL++A+S+YEQ IA+E+GKEHS  LPLLYAQYSRF  LV +
Sbjct: 306 SPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSR 365

Query: 702 NEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVV 761
           +  KAR I+ +A++H + SKPL+EALIHFE+IQ   + I YL+ LVEKVI P+ +  ++ 
Sbjct: 366 DAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIA 425

Query: 762 SASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAK 821
           S++ REELS I++EFL +FGDV+SIKKAED+H KLF  H+STSELKKR ADD+LAS++ K
Sbjct: 426 SSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYPHRSTSELKKRSADDFLASDRTK 485

Query: 822 MAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPP--VAQAQGQQWAPGYTQSASY 881
           MAK+Y +   PAQ V  AYP  Q QW+  Y  QPQ WPP   A AQ QQW P Y Q A+Y
Sbjct: 486 MAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAY 545

Query: 882 SGYG---STYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQA--TITPSQQ 936
             YG   + YT P   T V QA+ Y  YP       Q Y  QSYA P A A     P QQ
Sbjct: 546 GAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQTYPTQSYAPPVAAAAPAAAPVQQ 582

BLAST of Carg03790 vs. TAIR 10
Match: AT5G46400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 393.7 bits (1010), Expect = 4.3e-109
Identity = 216/571 (37.83%), Postives = 328/571 (57.44%), Query Frame = 0

Query: 235 EEDRLWNIVRANSLDFNAWTSLIEETEKVA-EDNILKIRRVYDAFLAEFPLCYGYWKKYA 294
           + DRL     + +LDF+ WT LI E E  +  D+I K+  VYDAFL EFPLC+GYW+KYA
Sbjct: 30  DNDRLKETFSSGALDFDEWTLLISEIETTSFPDDIEKLCLVYDAFLLEFPLCHGYWRKYA 89

Query: 295 DHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGT 354
            H+ +  + +  VEV+ERAV   TYSV +WL YC F ++ Y DP  + RLFERGL+++G 
Sbjct: 90  YHKIKLCTLEDAVEVFERAVQAATYSVAVWLDYCAFAVAAYEDPHDVSRLFERGLSFIGK 149

Query: 355 DYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKS 414
           DY    LWDKYIEY   QQ+W  LA +Y R L+ P+++LD Y+ +F+++AA+     LK 
Sbjct: 150 DYSCCTLWDKYIEYLLGQQQWSSLANVYLRTLKYPSKKLDLYYKNFRKIAAS-----LKE 209

Query: 415 SEEAVLDVQSE-AGDQVNGEEGHPDATEPSSKTV-------SAGLTEAEELEKYIAIREE 474
             +  +DV  + + D +  +  H   T+     V       S+    ++ L  Y++I E+
Sbjct: 210 KIKCRIDVNGDLSSDPMEEDLVHTRHTDEEISIVVRELMGPSSSSAVSKALHTYLSIGEQ 269

Query: 475 IYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHL 534
            Y+ +++   KI  FET IRRPYFHV+PL+  +LDNWH+YL F E  GD +         
Sbjct: 270 FYQDSRQLMEKISCFETQIRRPYFHVKPLDTNQLDNWHAYLSFGETYGDFD--------- 329

Query: 535 SVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNN 594
                                   + LYERC+I CANY E+W RY+ ++++    +L+N 
Sbjct: 330 ----------------------WAINLYERCLIPCANYTEFWFRYVDFVESKGGRELANF 389

Query: 595 ALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEH 654
           ALARASQ FVK    IHLF+ARFKE  GD + A  +      E+  G +E + K ANME 
Sbjct: 390 ALARASQTFVKSASVIHLFNARFKEHVGDASAASVALSRCGEELGFGFVENVTKKANMEK 449

Query: 655 RLGNLEEAYSVYEQAI-AIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 714
           RLGN E A + Y +A+     GKE+      LY Q+SR   ++  +   A +IL +  E+
Sbjct: 450 RLGNFEAAVTTYREALNKTLIGKENLETTARLYVQFSRLKYVITNSADDAAQILLEGNEN 509

Query: 715 GELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 774
               K L+E L+    +   ++++  LD +++K +    +++  +SA  +EE+S++++EF
Sbjct: 510 VPHCKLLLEELMRLLMMHGGSRQVDLLDPIIDKELSHQADSSDGLSAEDKEEISNLYMEF 563

Query: 775 LNLFGDVQSIKKAEDRHAKLFISHKSTSELK 796
           ++L G +  ++KA  RH KLF  H + ++L+
Sbjct: 570 IDLSGTIHDVRKALGRHIKLF-PHSARAKLR 563

BLAST of Carg03790 vs. TAIR 10
Match: AT4G24270.1 (EMBRYO DEFECTIVE 140 )

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-09
Identity = 84/353 (23.80%), Postives = 143/353 (40.51%), Query Frame = 0

Query: 245 ANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDK 304
           AN  +++A+   I+   K A  N+ K+R+  +A  A FPL    W ++A  EA   +++ 
Sbjct: 61  ANPYNYDAYVQYIKLLRKTA--NLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAASEN 120

Query: 305 VVEV---YERAVHGVTYSVDIWLHYCIFTL----STYGDP----ETIRRLFERGLAYVGT 364
           V E+   YER +     SV +W  Y  F L    S  G P      +R LFER +   G 
Sbjct: 121 VPEIVMLYERGLSDY-QSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGF 180

Query: 365 DYL-SFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELK 424
                  +W+ Y E+E      G LA I    +E  N+Q+ R  + F     + PL  L 
Sbjct: 181 HVTEGNRIWEGYREFEQ-----GVLATIDEADIEERNKQIQRIRSIFHR-HLSVPLENLS 240

Query: 425 SSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKE 484
           S+  A    + E G  ++ + G  D ++ S +   A                   KKA++
Sbjct: 241 STLIAYKTWELEQG--IDLDIGSDDLSKVSHQVAVAN------------------KKAQQ 300

Query: 485 FDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGS 544
             S+    E  I +        +  +   + +Y+ F +  GD  +V  +          S
Sbjct: 301 MYSERAHLEENISKQDLS----DTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVS 360

Query: 545 LISYLRGLSILLRSISVVK----LYERCVIACANYPEYWVRYILYMQASDSMD 582
              ++     L +++ V K     Y R   +C    + W RY+L ++   + +
Sbjct: 361 SDLWIDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDLWARYLLALERGSASE 380

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025249.10.0e+00100.00Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. argyrosper... [more]
XP_023514088.10.0e+0095.36pre-mRNA-processing factor 39-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023004937.10.0e+0095.01pre-mRNA-processing factor 39 isoform X1 [Cucurbita maxima][more]
XP_038876250.10.0e+0089.33pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida] >XP_038876251.1 pre... [more]
KAG6592841.10.0e+0095.78Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
Q4KLU23.2e-6931.60Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1[more]
Q1JPZ72.5e-6629.40Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2[more]
Q86UA12.0e-6328.92Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3[more]
Q8K2Z25.5e-6129.86Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3[more]
O749701.6e-6032.77Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
Match NameE-valueIdentityDescription
A0A6J1KRS70.0e+0095.01pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A1S3CBE20.0e+0089.10pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
A0A6J1L0W10.0e+0095.53pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1H6A40.0e+0095.53pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846... [more]
A0A1S3CBV20.0e+0088.98pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
Match NameE-valueIdentityDescription
AT1G04080.32.7e-25758.09Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04080.16.1e-25759.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04080.22.0e-19158.86Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G46400.14.3e-10937.83Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G24270.11.3e-0923.80EMBRYO DEFECTIVE 140 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 640..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..447
NoneNo IPR availablePANTHERPTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDcoord: 166..914
NoneNo IPR availablePANTHERPTHR17204:SF5PRE-MRNA-PROCESSING FACTOR 39coord: 166..914
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 335..370
e-value: 2.4E-6
score: 37.1
coord: 544..576
e-value: 2.9
score: 16.9
coord: 689..721
e-value: 140.0
score: 7.0
coord: 266..298
e-value: 8.7E-4
score: 28.6
coord: 648..683
e-value: 58.0
score: 9.8
coord: 300..332
e-value: 0.21
score: 20.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 241..410
e-value: 4.9E-42
score: 145.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 493..818
e-value: 3.4E-45
score: 156.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 458..794
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 243..406

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03790-RACarg03790-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000395 mRNA 5'-splice site recognition
biological_process GO:0048510 regulation of timing of transition from vegetative to reproductive phase
biological_process GO:0006396 RNA processing
cellular_component GO:0000243 commitment complex
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0071004 U2-type prespliceosome
molecular_function GO:0005515 protein binding