Homology
BLAST of Carg03790 vs. NCBI nr
Match:
KAG7025249.1 (Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1822.8 bits (4720), Expect = 0.0e+00
Identity = 938/938 (100.00%), Postives = 938/938 (100.00%), Query Frame = 0
Query: 1 MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPS 60
MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPS
Sbjct: 1 MEKGKTVISIALLPSTPQKSSRGSLSSFSLEFSISFAFQGHTHLFFSSINFHSSLHSTPS 60
Query: 61 SSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSV 120
SSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSV
Sbjct: 61 SSSSFRLAKNYFCSLSMGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSV 120
Query: 121 ITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAM 180
ITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAM
Sbjct: 121 ITGDFKVTPMYADMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAM 180
Query: 181 ETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLW 240
ETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLW
Sbjct: 181 ETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLW 240
Query: 241 NIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFG 300
NIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFG
Sbjct: 241 NIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFG 300
Query: 301 STDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPL 360
STDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPL
Sbjct: 301 STDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPL 360
Query: 361 WDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLD 420
WDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLD
Sbjct: 361 WDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLD 420
Query: 421 VQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGF 480
VQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGF
Sbjct: 421 VQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGF 480
Query: 481 ETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGL 540
ETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGL
Sbjct: 481 ETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGL 540
Query: 541 SILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE 600
SILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE
Sbjct: 541 SILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE 600
Query: 601 IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA 660
IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA
Sbjct: 601 IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA 660
Query: 661 IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES 720
IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES
Sbjct: 661 IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES 720
Query: 721 IQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR 780
IQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR
Sbjct: 721 IQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR 780
Query: 781 HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG 840
HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG
Sbjct: 781 HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG 840
Query: 841 LQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQ 900
LQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQ
Sbjct: 841 LQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQ 900
Query: 901 QAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 939
QAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 901 QAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 938
BLAST of Carg03790 vs. NCBI nr
Match:
XP_023514088.1 (pre-mRNA-processing factor 39-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1590.5 bits (4117), Expect = 0.0e+00
Identity = 822/862 (95.36%), Postives = 826/862 (95.82%), Query Frame = 0
Query: 77 MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
MGDSETIVAQTSEFMRYT AGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTP+YADMSD
Sbjct: 1 MGDSETIVAQTSEFMRYTSAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPIYADMSD 60
Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV
Sbjct: 61 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 120
Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
AA+ DNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL
Sbjct: 121 AAVLDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 180
Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 300
Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
LAMIYTRILENPNQQLDRY+NSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYYNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 360
Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420
Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
AELDNWHSYLDFIEQEGDLNK VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480
Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA
Sbjct: 481 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 540
Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 600
Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVE 660
Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFIS KSTSELKK
Sbjct: 661 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISRKSTSELKK 720
Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780
Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV QQAYSAQSYAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV-QQAYSAQSYAQPTAQAT 830
Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
ITPSQQPASVAQPYYGSYYMNG
Sbjct: 841 ITPSQQPASVAQPYYGSYYMNG 830
BLAST of Carg03790 vs. NCBI nr
Match:
XP_023004937.1 (pre-mRNA-processing factor 39 isoform X1 [Cucurbita maxima])
HSP 1 Score: 1582.4 bits (4096), Expect = 0.0e+00
Identity = 819/862 (95.01%), Postives = 826/862 (95.82%), Query Frame = 0
Query: 77 MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
MGDSETIVAQTSEF+RYT AG VSSGYADSSTNLI +PGVFLSVITGDFKVTP+YADMSD
Sbjct: 1 MGDSETIVAQTSEFIRYTSAGCVSSGYADSSTNLISYPGVFLSVITGDFKVTPIYADMSD 60
Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV
Sbjct: 61 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 120
Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
AA+SDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL
Sbjct: 121 AAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 180
Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 300
Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 360
Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420
Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
AELDNWHSYLDFIEQEGDLNK VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480
Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
VIACANYPEYWVRYILYMQASDSMDLSN+ALARASQVFVKRRPEIHLFSARFKEQNGDIA
Sbjct: 481 VIACANYPEYWVRYILYMQASDSMDLSNDALARASQVFVKRRPEIHLFSARFKEQNGDIA 540
Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 600
Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVE 660
Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK
Sbjct: 661 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 720
Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780
Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV QQAYSAQSYAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV-QQAYSAQSYAQPTAQAT 830
Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
ITPSQQPASVAQPYYGSYYMNG
Sbjct: 841 ITPSQQPASVAQPYYGSYYMNG 830
BLAST of Carg03790 vs. NCBI nr
Match:
XP_038876250.1 (pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida] >XP_038876251.1 pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida])
HSP 1 Score: 1497.6 bits (3876), Expect = 0.0e+00
Identity = 770/862 (89.33%), Postives = 789/862 (91.53%), Query Frame = 0
Query: 77 MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
MGDSET+VAQTSE MRY GYVSSGYADSSTNLIPHPG F SVITGD+ V+ ADM D
Sbjct: 1 MGDSETVVAQTSEVMRYASGGYVSSGYADSSTNLIPHPGAFQSVITGDYSVSHTSADMGD 60
Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
GNAYVTDPNS QQGNHV EVDE V VTDHSQN AVSENSAMET V HDSSLNG+V
Sbjct: 61 GNAYVTDPNSTQQGNHVVEVDETKADVVVTDHSQNAAVSENSAMETVPVAGHDSSLNGNV 120
Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
AA S N SVENGN VEN NEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSL
Sbjct: 121 AAESVNTSSVENGNIVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
IEETEKVAEDNILKIRRVYD+FLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
LAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSE+AV+DVQSEAGDQVNGEE HP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEQAVVDVQSEAGDQVNGEEDHP 360
Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
DA EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DAAEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420
Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
AELDNWHSYLDFIEQEGDLNK VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480
Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
VIACANYPEYW+RYIL MQA+DSMDL+NNALARASQVFVKRRPEIHLF+ARFKEQNGD+A
Sbjct: 481 VIACANYPEYWIRYILCMQATDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDVA 540
Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLE+AYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLL 600
Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQS AKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTAKRIDYLDSLVE 660
Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
KVIVPNTENA+V SASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK
Sbjct: 661 KVIVPNTENATVASASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 720
Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
RLADDYLASEKAKMAKSYP VASPAQS+MG YPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPGVASPAQSLMGVYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780
Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
WAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPTYP QQQAY+AQSYAQPTAQ T
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYTAQSYAQPTAQTT 831
Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
I PSQQPASVAQPYYGSYYMNG
Sbjct: 841 IAPSQQPASVAQPYYGSYYMNG 831
BLAST of Carg03790 vs. NCBI nr
Match:
KAG6592841.1 (Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1496.5 bits (3873), Expect = 0.0e+00
Identity = 772/806 (95.78%), Postives = 774/806 (96.03%), Query Frame = 0
Query: 133 DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 192
DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL
Sbjct: 33 DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 92
Query: 193 NGSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 252
NGSVAA+SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA
Sbjct: 93 NGSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 152
Query: 253 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 312
WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA
Sbjct: 153 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 212
Query: 313 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 372
VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ
Sbjct: 213 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 272
Query: 373 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 432
EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE
Sbjct: 273 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 332
Query: 433 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 492
EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR
Sbjct: 333 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 392
Query: 493 PLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKL 552
PLNVAELDNWHSYLDFIEQEGDLNK VVKL
Sbjct: 393 PLNVAELDNWHSYLDFIEQEGDLNK-------------------------------VVKL 452
Query: 553 YERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQN 612
YERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQN
Sbjct: 453 YERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQN 512
Query: 613 GDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRA 672
GDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRA
Sbjct: 513 GDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRA 572
Query: 673 LPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLD 732
LPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRI YLD
Sbjct: 573 LPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLD 632
Query: 733 SLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTS 792
SLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTS
Sbjct: 633 SLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTS 692
Query: 793 ELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQA 852
ELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQA
Sbjct: 693 ELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQA 752
Query: 853 QGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPT 912
QGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQAS+YATYPPTYPVQQQAYSAQSYAQPT
Sbjct: 753 QGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPTYPVQQQAYSAQSYAQPT 807
Query: 913 AQATITPSQQPASVAQPYYGSYYMNG 939
AQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 813 AQATITPSQQPASVAQPYYGSYYMNG 807
BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match:
Q4KLU2 (Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 3.2e-69
Identity = 188/595 (31.60%), Postives = 295/595 (49.58%), Query Frame = 0
Query: 229 VPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGY 288
+PPL + ++ W V+A DFN WT L++ E+ E+++ R+ +DAFLA +P CYGY
Sbjct: 49 LPPLPPDFEKYWKSVQAYPEDFNTWTYLLQYVEQ--ENHLFAARKAFDAFLAHYPYCYGY 108
Query: 289 WKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIRRL 348
WKKYAD E + + + EVY R + +T SVD+W+HY F T DPE T+R
Sbjct: 109 WKKYADLEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFLKETLDPADPETSLTLRGT 168
Query: 349 FERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELA 408
FE + G D+ S LW+ YI +E Q + IY+R+L P Q +F FKE
Sbjct: 169 FEHAVVSAGLDFRSDKLWEMYINWETEQGNLSGVTSIYSRLLGIPTQFYSLHFQRFKEHI 228
Query: 409 ANRPLSELKSSEEAV------LDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEEL- 468
E +SE+ + + G + G + +P+ +T TE E +
Sbjct: 229 QGHLPREFLTSEKFIELRKELASMTLHGGTNDDIPSGLEEIKDPAKRT-----TEVENMR 288
Query: 469 EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLN 528
+ I + +EI+ + SKI FE I+RPYFHV+PL A+L+NW YL+F + G
Sbjct: 289 HRIIEVHQEIFNLNEHEVSKIWNFEEEIKRPYFHVKPLEKAQLNNWKEYLEFELENGSNE 348
Query: 529 KVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQA 588
+ +V L+ERCVIACA Y E+W++Y YM+
Sbjct: 349 R-------------------------------IVILFERCVIACACYEEFWIKYAKYME- 408
Query: 589 SDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEA 648
+ S++ + RA V + ++P +HL A F+EQ G++ AR + + T I GL
Sbjct: 409 NHSVEGVRHVYNRACHVHLAKKPMVHLLWAAFEEQQGNLEEARRILKNIETAIE-GLAMV 468
Query: 649 IIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYA-QYSRFLNLVCKNEGKAR 708
++ N+E R GN++EA + E+A+ K + + YA + +R L V N KAR
Sbjct: 469 RLRRVNLERRHGNVKEAEHLLEEAM----NKTKTSSESSFYAIKLARHLFKVQANVVKAR 528
Query: 709 EILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMRE 768
++L A++ + + L L+ E + + + +K I S +S +MR
Sbjct: 529 KVLSNAIQKDKENTKLYLNLLEMEYNCDIKQNEENILAAFDKAI------KSPMSIAMRV 588
Query: 769 ELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAK 810
+ S +EFL FG DV + + H KL + H+ ++ KR A++ L +AK
Sbjct: 589 KFSQRKVEFLEDFGSDVNKLLDTYNEHQKL-LKHQ---DIVKRKAENGLEQPEAK 589
BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match:
Q1JPZ7 (Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2)
HSP 1 Score: 255.4 bits (651), Expect = 2.5e-66
Identity = 202/687 (29.40%), Postives = 321/687 (46.72%), Query Frame = 0
Query: 200 SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEE 259
S++ ++E +A + E + E P L E +RL +V N DFN W L++
Sbjct: 116 SESPSNMELEDAPKEPAEPAAEADPAAPQEPELPTEYERLSKVVEDNPEDFNGWVYLLQY 175
Query: 260 TEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYS 319
E+ E+++L R+ +DAF +P CYGYWKKYAD E + G EVY R + + S
Sbjct: 176 VEQ--ENHLLGSRKAFDAFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLS 235
Query: 320 VDIWLHYCIFTL----STYGDPET-IRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEW 379
VD+WLHY F ++ G+ E+ IR +E + GTD+ S LW+ YI +E Q +
Sbjct: 236 VDLWLHYITFLRENQDTSDGEAESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKL 295
Query: 380 GRLAMIYTRILENPNQQLDRYFNSFKE-LAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 439
+ IY R+L P Q ++F FK+ + +N P L E L V+ ++ +G+E
Sbjct: 296 ANVTAIYDRLLCIPTQLYSQHFQKFKDHVQSNNPKHFLSEEEFVSLRVELANANKPSGDE 355
Query: 440 -------------GHPDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIG 499
G D +P+ + +TE E + K I R+E++ + SK
Sbjct: 356 DAETEAPGEELPPGTEDLPDPAKR-----VTEIENMRHKVIETRQEMFNHNEHEVSKRWA 415
Query: 500 FETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRG 559
FE I+RPYFHV+ L +L+NW YLDF + G +
Sbjct: 416 FEEGIKRPYFHVKALEKTQLNNWREYLDFELENGTPER---------------------- 475
Query: 560 LSILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRP 619
VV L+ERC+IACA Y E+W++Y Y++ S S + + +A V + ++P
Sbjct: 476 ---------VVVLFERCLIACALYEEFWIKYAKYLE-SYSTEAVRHIYKKACTVHLPKKP 535
Query: 620 EIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQ 679
+HL A F+EQ G I AR+ + V + PGL ++ ++E R GN+EEA ++ +
Sbjct: 536 NVHLLWAAFEEQQGSIDEARSILKAVEVSV-PGLAMVRLRRVSLERRHGNMEEAEALLQD 595
Query: 680 AIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE 739
AI R S + +R L V K+ G+A+++L +AVE E + L L+ E
Sbjct: 596 AITNGRNSSES---SFYSVKLARQLVKVQKSIGRAKKVLLEAVEKDETNPKLYLNLLELE 655
Query: 740 SIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFG-DVQSIKKAE 799
+ + + ++ + + S ++ S R+ ++FL FG D+ ++ A
Sbjct: 656 YSGDVQQNEAEIIACFDRALSSSMALESRITFSQRK------VDFLEDFGSDINTLMAAY 715
Query: 800 DRHAKLFISHKSTSELKKRLADDYLASEKAKMAKS-YPSVASPAQSVMGAYPTG------ 849
++H +L +S KR A++ AK ++ SVAS M A G
Sbjct: 716 EQHQRLLAEQESF----KRKAENGSEEPDAKRQRTDDQSVASGQMMDMQANHAGYNYNNW 749
BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match:
Q86UA1 (Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3)
HSP 1 Score: 245.7 bits (626), Expect = 2.0e-63
Identity = 199/688 (28.92%), Postives = 316/688 (45.93%), Query Frame = 0
Query: 172 NAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAVENTNEASEEQHFVD----- 231
N+ + ++ + VV H + + + +++ S ++ V + E +E VD
Sbjct: 11 NSSNGSTGNSSEVVVEHPTDFSTEIMNVTEMEQSPDDSPNVNASTEETEMASAVDLPVTL 70
Query: 232 ----GSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEF 291
+ PP E ++ W V N DF W L++ E+ E++++ R+ +D F +
Sbjct: 71 TETEANFPP---EYEKFWKTVENNPQDFTGWVYLLQYVEQ--ENHLMAARKAFDRFFIHY 130
Query: 292 PLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE-- 351
P CYGYWKKYAD E R + EVY R + + SVD+W+HY F T GDPE
Sbjct: 131 PYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETN 190
Query: 352 -TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFN 411
TIR FE + GTD+ S LW+ YI +E Q + IY RIL P Q +F
Sbjct: 191 NTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQ 250
Query: 412 SFKELAANRPLSELKSSEEAV-LDVQSEAGDQVNGEEGHP---------DATEPSSKTVS 471
FKE N +L + E+ + L + + + +G++G P D T+P+
Sbjct: 251 RFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL--- 310
Query: 472 AGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYL 531
+TE E + + I I +E++ + SK FE I+RPYFHV+PL A+L NW YL
Sbjct: 311 --ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL 370
Query: 532 DFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEY 591
+F + G + VV L+ERCVI+CA Y E+
Sbjct: 371 EFEIENGTHER-------------------------------VVVLFERCVISCALYEEF 430
Query: 592 WVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVH 651
W++Y YM+ + S++ + +RA + + ++P +H+ A F+EQ G+I AR +
Sbjct: 431 WIKYAKYME-NHSIEGVRHVFSRACTIHLPKKPMVHMLWAAFEEQQGNINEAR-NILKTF 490
Query: 652 TEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYA-QYSRFLN 711
E GL ++ ++E R GNLEEA + + AI + S YA + +R L
Sbjct: 491 EECVLGLAMVRLRRVSLERRHGNLEEAEHLLQDAIKNAKSNNESS----FYAVKLARHLF 550
Query: 712 LVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTEN 771
+ KN K+R++L +A+E + + L L+ E + + + +K +
Sbjct: 551 KIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDLKQNEENILNCFDKAV------ 610
Query: 772 ASVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLA 831
+ MR S +EFL FG DV + A D H L S KR A++
Sbjct: 611 HGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDSL----KRKAENGSE 641
Query: 832 SEKAKMAKSYPSVASPAQSVMGAYPTGQ 833
+ K A + + +S Q + G Q
Sbjct: 671 EPEEKKAHTEDTTSSSTQMIDGDLQANQ 641
BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match:
Q8K2Z2 (Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3)
HSP 1 Score: 237.7 bits (605), Expect = 5.5e-61
Identity = 206/690 (29.86%), Postives = 316/690 (45.80%), Query Frame = 0
Query: 176 ENSAMETAEVVSHDSSLNGS-VAAISDNAFSVE--NGNAVENTNEASEEQHF-------- 235
+NS ME + S+ N S VA + FS E N +E + +AS H
Sbjct: 2 QNSHMEEYRNSDNGSTGNSSEVAVVEHPDFSTEIMNVTEMEQSPDASPSAHASTEENEMA 61
Query: 236 ---------VDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVY 295
+G PP E ++ W V N DF W L++ E+ E++++ R+ +
Sbjct: 62 NAVNLPVTEAEGDFPP---EFEKFWKTVEMNPQDFTGWVYLLQYVEQ--ENHLMAARKAF 121
Query: 296 DAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY- 355
D F +P CYGYWKKYAD E R + + EVY R + + SVD+W+HY F T
Sbjct: 122 DKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLE 181
Query: 356 -GDPE---TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQ 415
GD E TIR FE + GTD+ S LW+ YI +E Q + +Y RIL P Q
Sbjct: 182 PGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQ 241
Query: 416 QLDRYFNSFKELAANRPLSELKSSEEAV-LDVQSEAGDQVNGEEGHPDATEPSS-KTVSA 475
+F FKE N +L + E+ + L + + + +G++G P PS + +S
Sbjct: 242 LYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDISP 301
Query: 476 G--LTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAE-LDNWHS 535
+TE E + + I I +E++ + SK FE I+RPYFHV+PL A+ NW
Sbjct: 302 AKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQPKKNWKE 361
Query: 536 YLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYP 595
YL+F + G + VV L+ERCVI+CA Y
Sbjct: 362 YLEFEIENGTHER-------------------------------VVVLFERCVISCALYE 421
Query: 596 EYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQL 655
E+W++Y YM+ + S++ + +RA V + ++P H+ A F+EQ G+I AR +
Sbjct: 422 EFWIKYAKYME-NHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILR- 481
Query: 656 VHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYA-QYSRF 715
E GL ++ ++E R GN+EEA + + AI + S YA + +R
Sbjct: 482 TFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESS----FYAIKLARH 541
Query: 716 LNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNT 775
L + KN K+R++L +A+E + + L L+ E + + + +K I
Sbjct: 542 LFKIQKNLPKSRKVLLEAIEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAI---- 601
Query: 776 ENASVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDY 833
+ MR S +EFL FG DV + A D H L K LK++ +
Sbjct: 602 --HGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLL---KEQDTLKRKAEN-- 637
BLAST of Carg03790 vs. ExPASy Swiss-Prot
Match:
O74970 (Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp39 PE=3 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 1.6e-60
Identity = 155/473 (32.77%), Postives = 233/473 (49.26%), Query Frame = 0
Query: 235 EEDRLWNIVRANSLDFNAWTSLIEETEKV--------AEDNILKIRRVYDAFLAEFPLCY 294
E D+ + N DF+AW L+ +E + ++ I +R VYD FL ++PL +
Sbjct: 13 EWDKYNRQINKNPDDFDAWEGLVRASEHLEGGVGRNSSKQAINTLRSVYDRFLGKYPLLF 72
Query: 295 GYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFER 354
GYWKKYAD E + +YER + G+ +SVD+W +YC F + T GD +R LF +
Sbjct: 73 GYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFKMETNGDANEVRELFMQ 132
Query: 355 GLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANR 414
G VG D+LS P WDKY+E+E Q+ + + R++ P Q RYF F +++ ++
Sbjct: 133 GANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIHIPLHQYARYFERFVQVSQSQ 192
Query: 415 PLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEE--LEKYIAIRE 474
P+ +L DV + V E + TV G E E + I
Sbjct: 193 PIQQLLPP-----DVLASIRADVTREPAKVVSAGSKQITVERGELEIEREMRARIYNIHL 252
Query: 475 EIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNH 534
+I++K + +K FE+ I+RPYFHV+ L+ A+L NW YLDF E EGD ++ +
Sbjct: 253 QIFQKVQLETAKRWTFESEIKRPYFHVKELDEAQLVNWRKYLDFEEVEGDFQRICH---- 312
Query: 535 LSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQAS-DSMDLS 594
LYERC+I CA Y E+W RY +M A D ++
Sbjct: 313 ---------------------------LYERCLITCALYDEFWFRYARWMSAQPDHLNDV 372
Query: 595 NNALARASQVFVK-RRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHAN 654
+ RAS +F RP I + A F+E G+IA A+A YQ + T++ PG LEA++
Sbjct: 373 SIIYERASCIFASISRPGIRVQYALFEESQGNIASAKAIYQSILTQL-PGNLEAVLGWVG 432
Query: 655 MEHRLG---NLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEG 693
+E R +L A++V I GK ++ +L + + LV K EG
Sbjct: 433 LERRNAPNYDLTNAHAVLRS--IINEGKCNTGITEVLITE---DIKLVWKIEG 443
BLAST of Carg03790 vs. ExPASy TrEMBL
Match:
A0A6J1KRS7 (pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)
HSP 1 Score: 1582.4 bits (4096), Expect = 0.0e+00
Identity = 819/862 (95.01%), Postives = 826/862 (95.82%), Query Frame = 0
Query: 77 MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
MGDSETIVAQTSEF+RYT AG VSSGYADSSTNLI +PGVFLSVITGDFKVTP+YADMSD
Sbjct: 1 MGDSETIVAQTSEFIRYTSAGCVSSGYADSSTNLISYPGVFLSVITGDFKVTPIYADMSD 60
Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV
Sbjct: 61 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 120
Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
AA+SDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL
Sbjct: 121 AAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 180
Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 300
Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 360
Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420
Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
AELDNWHSYLDFIEQEGDLNK VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480
Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
VIACANYPEYWVRYILYMQASDSMDLSN+ALARASQVFVKRRPEIHLFSARFKEQNGDIA
Sbjct: 481 VIACANYPEYWVRYILYMQASDSMDLSNDALARASQVFVKRRPEIHLFSARFKEQNGDIA 540
Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 600
Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDSLVE
Sbjct: 601 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDSLVE 660
Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK
Sbjct: 661 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 720
Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 780
Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV QQAYSAQSYAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPV-QQAYSAQSYAQPTAQAT 830
Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
ITPSQQPASVAQPYYGSYYMNG
Sbjct: 841 ITPSQQPASVAQPYYGSYYMNG 830
BLAST of Carg03790 vs. ExPASy TrEMBL
Match:
A0A1S3CBE2 (pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)
HSP 1 Score: 1493.0 bits (3864), Expect = 0.0e+00
Identity = 768/862 (89.10%), Postives = 790/862 (91.65%), Query Frame = 0
Query: 77 MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
MGDSET+VAQTSE M Y AGYVSSGYADSSTN+IPHPG F SVITGDF V+ ADM D
Sbjct: 1 MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
GNAYVTDPNS+QQGNHV EVDE V VTDHSQN AVSENSAMETA +V HDSS+NGSV
Sbjct: 61 GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
A S NA SVENGN VEN NEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
TYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
LAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSEEAV+DVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
+A+EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420
Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
AELDNWHSYLDFIEQEGDLNK VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480
Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
VIACANYPEYW+RYIL MQASDSMDL+NNALARASQVFVKRRPEIHLF+ARFKEQNGDI
Sbjct: 481 VIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDIT 540
Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
GARASYQLVH+EISPGLLEAIIKHANMEHRLGNLE+AYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLL 600
Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
YAQYSRF NLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQS KRI YLDSLVE
Sbjct: 601 YAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRIDYLDSLVE 660
Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
KVIVPNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRH KLFISHKSTSELKK
Sbjct: 661 KVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISHKSTSELKK 720
Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
RLADDYLASEKAKMAKSYPSVASPAQS+MG YPTGQNQWAASYG+QPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQ 780
Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
WAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPTYP QQQAYSAQ+YAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPAQQQAYSAQTYAQPTAQAT 831
Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
+ PSQQ ASVAQPYYGSYYMNG
Sbjct: 841 VAPSQQTASVAQPYYGSYYMNG 831
BLAST of Carg03790 vs. ExPASy TrEMBL
Match:
A0A6J1L0W1 (pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)
HSP 1 Score: 1490.7 bits (3858), Expect = 0.0e+00
Identity = 769/805 (95.53%), Postives = 773/805 (96.02%), Query Frame = 0
Query: 134 MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 193
MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1 MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60
Query: 194 GSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 253
GSVAA+SDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61 GSVAAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120
Query: 254 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 313
TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180
Query: 314 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 373
HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240
Query: 374 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 433
WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300
Query: 434 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 493
GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360
Query: 494 LNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLY 553
LNVAELDNWHSYLDFIEQEGDLNK VVKLY
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNK-------------------------------VVKLY 420
Query: 554 ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNG 613
ERCVIACANYPEYWVRYILYMQASDSMDLSN+ALARASQVFVKRRPEIHLFSARFKEQNG
Sbjct: 421 ERCVIACANYPEYWVRYILYMQASDSMDLSNDALARASQVFVKRRPEIHLFSARFKEQNG 480
Query: 614 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 673
DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL
Sbjct: 481 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 540
Query: 674 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDS 733
PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQSAAKRI YLDS
Sbjct: 541 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSAAKRIDYLDS 600
Query: 734 LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 793
LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE
Sbjct: 601 LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 660
Query: 794 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 853
LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ
Sbjct: 661 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 720
Query: 854 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 913
GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA
Sbjct: 721 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 774
Query: 914 QATITPSQQPASVAQPYYGSYYMNG 939
QATITPSQQPASVAQPYYGSYYMNG
Sbjct: 781 QATITPSQQPASVAQPYYGSYYMNG 774
BLAST of Carg03790 vs. ExPASy TrEMBL
Match:
A0A6J1H6A4 (pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846 PE=4 SV=1)
HSP 1 Score: 1489.6 bits (3855), Expect = 0.0e+00
Identity = 769/805 (95.53%), Postives = 770/805 (95.65%), Query Frame = 0
Query: 134 MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 193
MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1 MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60
Query: 194 GSVAAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 253
GSVAA+SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61 GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120
Query: 254 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 313
TSLIEETEKVAEDNIL IRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILNIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180
Query: 314 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 373
HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240
Query: 374 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 433
WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300
Query: 434 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 493
GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360
Query: 494 LNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLY 553
LNVAELDNWHSYLDFIEQEGDLNK VVKLY
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNK-------------------------------VVKLY 420
Query: 554 ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNG 613
ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFS RFKEQNG
Sbjct: 421 ERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSGRFKEQNG 480
Query: 614 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 673
DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL
Sbjct: 481 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRAL 540
Query: 674 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDS 733
PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRI YLDS
Sbjct: 541 PLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLDS 600
Query: 734 LVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 793
LVEKVIV NTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE
Sbjct: 601 LVEKVIVSNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSE 660
Query: 794 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 853
LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ
Sbjct: 661 LKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQ 720
Query: 854 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 913
GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA
Sbjct: 721 GQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTA 774
Query: 914 QATITPSQQPASVAQPYYGSYYMNG 939
QATITPSQQPASVAQPYYGSYYMNG
Sbjct: 781 QATITPSQQPASVAQPYYGSYYMNG 774
BLAST of Carg03790 vs. ExPASy TrEMBL
Match:
A0A1S3CBV2 (pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)
HSP 1 Score: 1486.9 bits (3848), Expect = 0.0e+00
Identity = 767/862 (88.98%), Postives = 789/862 (91.53%), Query Frame = 0
Query: 77 MGDSETIVAQTSEFMRYTYAGYVSSGYADSSTNLIPHPGVFLSVITGDFKVTPMYADMSD 136
MGDSET+VAQTSE M Y AGYVSSGYADSSTN+IPHPG F SVITGDF V+ ADM D
Sbjct: 1 MGDSETVVAQTSEAMGYASAGYVSSGYADSSTNVIPHPGAFQSVITGDFSVSRTSADMGD 60
Query: 137 GNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSV 196
GNAYVTDPNS+QQGNHV EVDE V VTDHSQN AVSENSAMETA +V HDSS+NGSV
Sbjct: 61 GNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVNGSV 120
Query: 197 AAISDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSL 256
A S NA SVENGN VEN NEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSL
Sbjct: 121 ATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSWTSL 180
Query: 257 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 316
IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV
Sbjct: 181 IEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGV 240
Query: 317 TYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGR 376
TYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQEWGR
Sbjct: 241 TYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR 300
Query: 377 LAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHP 436
LAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSEEAV+DVQSEAGDQVNGEEGHP
Sbjct: 301 LAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEEGHP 360
Query: 437 DATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 496
+A+EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
Sbjct: 361 EASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNV 420
Query: 497 AELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERC 556
AELDNWHSYLDFIEQEGDLNK VVKLYERC
Sbjct: 421 AELDNWHSYLDFIEQEGDLNK-------------------------------VVKLYERC 480
Query: 557 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 616
VIACANYPEYW+RYIL MQASDSMDL+NNALARASQVFVKRRPEIHLF+ARFKEQNGDI
Sbjct: 481 VIACANYPEYWIRYILCMQASDSMDLANNALARASQVFVKRRPEIHLFAARFKEQNGDIT 540
Query: 617 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLL 676
GARASYQLVH+EISPGLLEAIIKHANMEHRLGNLE+AYSVYEQAIAIERGKEHSRALPLL
Sbjct: 541 GARASYQLVHSEISPGLLEAIIKHANMEHRLGNLEDAYSVYEQAIAIERGKEHSRALPLL 600
Query: 677 YAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVE 736
YAQYSRF NLVCKNEGKAREILDKAVEHGELSKPLIEALIHFE+IQS KRI YLDSLVE
Sbjct: 601 YAQYSRFQNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFEAIQSTTKRIDYLDSLVE 660
Query: 737 KVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKK 796
KVIVPNTENA+VVSASMREELSSIFLEFLNLFGDVQSIKKAEDRH KLFISHKSTSELKK
Sbjct: 661 KVIVPNTENATVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHVKLFISHKSTSELKK 720
Query: 797 RLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQ 856
RLADDYLASEKAKMAKSYPSVASPAQS+MG YPTGQNQWAASYG+QPQAWPPVAQAQGQQ
Sbjct: 721 RLADDYLASEKAKMAKSYPSVASPAQSLMGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQ 780
Query: 857 WAPGYTQSASYSGYGSTYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQAT 916
WAPGYTQSASYSGYGSTYTNP VSTSVSQASTYATYPPTYP QQAYSAQ+YAQPTAQAT
Sbjct: 781 WAPGYTQSASYSGYGSTYTNPQVSTSVSQASTYATYPPTYPA-QQAYSAQTYAQPTAQAT 830
Query: 917 ITPSQQPASVAQPYYGSYYMNG 939
+ PSQQ ASVAQPYYGSYYMNG
Sbjct: 841 VAPSQQTASVAQPYYGSYYMNG 830
BLAST of Carg03790 vs. TAIR 10
Match:
AT1G04080.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 885.9 bits (2288), Expect = 2.7e-257
Identity = 481/828 (58.09%), Postives = 587/828 (70.89%), Query Frame = 0
Query: 158 EAMVSVGVT-----DHSQNNAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAV 217
EAMVS G T D++ + A E++ ETA +V S+N ++ + VENG+A
Sbjct: 5 EAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNND--SLVNGTAPVENGSAT 64
Query: 218 ENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIR 277
+N + D + LS EE+RLWNIVRANSL+FNAWT+LI+ETE++A+DNI KIR
Sbjct: 65 DNVAVTAPAAEHGDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNIAKIR 124
Query: 278 RVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLS 337
+VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++
Sbjct: 125 KVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFAIN 184
Query: 338 TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQL 397
TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q L
Sbjct: 185 TYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNL 244
Query: 398 DRYFNSFKELAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATE 457
DRYF+SFKELA RPLSEL+S+EE A + V +A + E G +TE
Sbjct: 245 DRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTE 304
Query: 458 PSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD 517
S K SA TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+
Sbjct: 305 QSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELE 364
Query: 518 NWHSYLDFIEQEGDLNKVS-----------------YLPNHLSVRQGGSLISYLRGLSIL 577
NWH+YLDFIE++GD NK+S + + S+ S + +
Sbjct: 365 NWHNYLDFIERDGDFNKLSSIWCIICLIGFPLDQATFKWEITETKACASICSNVINAGVF 424
Query: 578 L-------RSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVK 637
L SVVKLYERCV+ CANYPEYW+RY+ M+AS S DL+ NALARA+QVFVK
Sbjct: 425 LTFCLSGKEGPSVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVK 484
Query: 638 RRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSV 697
++PEIHLF+AR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANME+RLGNL++A+S+
Sbjct: 485 KQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSL 544
Query: 698 YEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALI 757
YEQ IA+E+GKEHS LPLLYAQYSRF LV ++ KAR I+ +A++H + SKPL+EALI
Sbjct: 545 YEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALI 604
Query: 758 HFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKK 817
HFE+IQ + I YL+ LVEKVI P+ + ++ S++ REELS I++EFL +FGDV+SIKK
Sbjct: 605 HFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKK 664
Query: 818 AEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWA 877
AED+H KLF H+STSELKKR ADD+LAS++ KMAK+Y + PAQ V AYP Q QW+
Sbjct: 665 AEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWS 724
Query: 878 ASYGLQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPPVSTSVSQASTYAT 936
Y QPQ WPP A AQ QQW P Y Q A+Y YG + YT P T V QA+ Y
Sbjct: 725 GGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGA 784
BLAST of Carg03790 vs. TAIR 10
Match:
AT1G04080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 884.8 bits (2285), Expect = 6.1e-257
Identity = 476/804 (59.20%), Postives = 576/804 (71.64%), Query Frame = 0
Query: 158 EAMVSVGVT-----DHSQNNAVSENSAMETAEVVSHDSSLNGSVAAISDNAFSVENGNAV 217
EAMVS G T D++ + A E++ ETA +V S+N ++ + VENG+A
Sbjct: 5 EAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNND--SLVNGTAPVENGSAT 64
Query: 218 ENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIR 277
+N + D + LS EE+RLWNIVRANSL+FNAWT+LI+ETE++A+DNI KIR
Sbjct: 65 DNVAVTAPAAEHGDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNIAKIR 124
Query: 278 RVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLS 337
+VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++
Sbjct: 125 KVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFAIN 184
Query: 338 TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQL 397
TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q L
Sbjct: 185 TYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNL 244
Query: 398 DRYFNSFKELAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATE 457
DRYF+SFKELA RPLSEL+S+EE A + V +A + E G +TE
Sbjct: 245 DRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTE 304
Query: 458 PSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD 517
S K SA TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+
Sbjct: 305 QSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELE 364
Query: 518 NWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIAC 577
NWH+YLDFIE++GD NK VVKLYERCV+ C
Sbjct: 365 NWHNYLDFIERDGDFNK-------------------------------VVKLYERCVVTC 424
Query: 578 ANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARA 637
ANYPEYW+RY+ M+AS S DL+ NALARA+QVFVK++PEIHLF+AR KEQNGDIAGARA
Sbjct: 425 ANYPEYWIRYVTNMEASGSADLAENALARATQVFVKKQPEIHLFAARLKEQNGDIAGARA 484
Query: 638 SYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQY 697
+YQLVH+EISPGLLEA+IKHANME+RLGNL++A+S+YEQ IA+E+GKEHS LPLLYAQY
Sbjct: 485 AYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGKEHSTILPLLYAQY 544
Query: 698 SRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIV 757
SRF LV ++ KAR I+ +A++H + SKPL+EALIHFE+IQ + I YL+ LVEKVI
Sbjct: 545 SRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPREIDYLEPLVEKVIK 604
Query: 758 PNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLAD 817
P+ + ++ S++ REELS I++EFL +FGDV+SIKKAED+H KLF H+STSELKKR AD
Sbjct: 605 PDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYPHRSTSELKKRSAD 664
Query: 818 DYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPP--VAQAQGQQWA 877
D+LAS++ KMAK+Y + PAQ V AYP Q QW+ Y QPQ WPP A AQ QQW
Sbjct: 665 DFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWPPAQAAPAQPQQWN 724
Query: 878 PGYTQSASYSGYG---STYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQA 936
P Y Q A+Y YG + YT P T V QA+ Y YP Q Y QSYA P A A
Sbjct: 725 PAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQTYPTQSYAPPVAAA 768
BLAST of Carg03790 vs. TAIR 10
Match:
AT1G04080.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 667.2 bits (1720), Expect = 2.0e-191
Identity = 362/615 (58.86%), Postives = 436/615 (70.89%), Query Frame = 0
Query: 342 RLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKE 401
RLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q LDRYF+SFKE
Sbjct: 6 RLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNLDRYFSSFKE 65
Query: 402 LAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATEPSSKTVSAG 461
LA RPLSEL+S+EE A + V +A + E G +TE S K SA
Sbjct: 66 LAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTEQSPKLESAS 125
Query: 462 LTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFI 521
TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+NWH+YLDFI
Sbjct: 126 STEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELENWHNYLDFI 185
Query: 522 EQEGDLNKVSYLPNHLSVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVR 581
E++GD NK VVKLYERCV+ CANYPEYW+R
Sbjct: 186 ERDGDFNK-------------------------------VVKLYERCVVTCANYPEYWIR 245
Query: 582 YILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEI 641
Y+ M+AS S DL+ NALARA+QVFVK++PEIHLF+AR KEQNGDIAGARA+YQLVH+EI
Sbjct: 246 YVTNMEASGSADLAENALARATQVFVKKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEI 305
Query: 642 SPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCK 701
SPGLLEA+IKHANME+RLGNL++A+S+YEQ IA+E+GKEHS LPLLYAQYSRF LV +
Sbjct: 306 SPGLLEAVIKHANMEYRLGNLDDAFSLYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSR 365
Query: 702 NEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVV 761
+ KAR I+ +A++H + SKPL+EALIHFE+IQ + I YL+ LVEKVI P+ + ++
Sbjct: 366 DAEKARRIIVEALDHVQPSKPLMEALIHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIA 425
Query: 762 SASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAK 821
S++ REELS I++EFL +FGDV+SIKKAED+H KLF H+STSELKKR ADD+LAS++ K
Sbjct: 426 SSTEREELSLIYIEFLGIFGDVKSIKKAEDQHVKLFYPHRSTSELKKRSADDFLASDRTK 485
Query: 822 MAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPP--VAQAQGQQWAPGYTQSASY 881
MAK+Y + PAQ V AYP Q QW+ Y QPQ WPP A AQ QQW P Y Q A+Y
Sbjct: 486 MAKTY-NGTPPAQPVSNAYPNAQAQWSGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAY 545
Query: 882 SGYG---STYTNPPVSTSVSQASTYATYPPTYPVQQQAYSAQSYAQPTAQA--TITPSQQ 936
YG + YT P T V QA+ Y YP Q Y QSYA P A A P QQ
Sbjct: 546 GAYGGYPAGYTAPQAPTPVPQAAAYGAYP------AQTYPTQSYAPPVAAAAPAAAPVQQ 582
BLAST of Carg03790 vs. TAIR 10
Match:
AT5G46400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 393.7 bits (1010), Expect = 4.3e-109
Identity = 216/571 (37.83%), Postives = 328/571 (57.44%), Query Frame = 0
Query: 235 EEDRLWNIVRANSLDFNAWTSLIEETEKVA-EDNILKIRRVYDAFLAEFPLCYGYWKKYA 294
+ DRL + +LDF+ WT LI E E + D+I K+ VYDAFL EFPLC+GYW+KYA
Sbjct: 30 DNDRLKETFSSGALDFDEWTLLISEIETTSFPDDIEKLCLVYDAFLLEFPLCHGYWRKYA 89
Query: 295 DHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGT 354
H+ + + + VEV+ERAV TYSV +WL YC F ++ Y DP + RLFERGL+++G
Sbjct: 90 YHKIKLCTLEDAVEVFERAVQAATYSVAVWLDYCAFAVAAYEDPHDVSRLFERGLSFIGK 149
Query: 355 DYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKS 414
DY LWDKYIEY QQ+W LA +Y R L+ P+++LD Y+ +F+++AA+ LK
Sbjct: 150 DYSCCTLWDKYIEYLLGQQQWSSLANVYLRTLKYPSKKLDLYYKNFRKIAAS-----LKE 209
Query: 415 SEEAVLDVQSE-AGDQVNGEEGHPDATEPSSKTV-------SAGLTEAEELEKYIAIREE 474
+ +DV + + D + + H T+ V S+ ++ L Y++I E+
Sbjct: 210 KIKCRIDVNGDLSSDPMEEDLVHTRHTDEEISIVVRELMGPSSSSAVSKALHTYLSIGEQ 269
Query: 475 IYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHL 534
Y+ +++ KI FET IRRPYFHV+PL+ +LDNWH+YL F E GD +
Sbjct: 270 FYQDSRQLMEKISCFETQIRRPYFHVKPLDTNQLDNWHAYLSFGETYGDFD--------- 329
Query: 535 SVRQGGSLISYLRGLSILLRSISVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNN 594
+ LYERC+I CANY E+W RY+ ++++ +L+N
Sbjct: 330 ----------------------WAINLYERCLIPCANYTEFWFRYVDFVESKGGRELANF 389
Query: 595 ALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEH 654
ALARASQ FVK IHLF+ARFKE GD + A + E+ G +E + K ANME
Sbjct: 390 ALARASQTFVKSASVIHLFNARFKEHVGDASAASVALSRCGEELGFGFVENVTKKANMEK 449
Query: 655 RLGNLEEAYSVYEQAI-AIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 714
RLGN E A + Y +A+ GKE+ LY Q+SR ++ + A +IL + E+
Sbjct: 450 RLGNFEAAVTTYREALNKTLIGKENLETTARLYVQFSRLKYVITNSADDAAQILLEGNEN 509
Query: 715 GELSKPLIEALIHFESIQSAAKRIGYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 774
K L+E L+ + ++++ LD +++K + +++ +SA +EE+S++++EF
Sbjct: 510 VPHCKLLLEELMRLLMMHGGSRQVDLLDPIIDKELSHQADSSDGLSAEDKEEISNLYMEF 563
Query: 775 LNLFGDVQSIKKAEDRHAKLFISHKSTSELK 796
++L G + ++KA RH KLF H + ++L+
Sbjct: 570 IDLSGTIHDVRKALGRHIKLF-PHSARAKLR 563
BLAST of Carg03790 vs. TAIR 10
Match:
AT4G24270.1 (EMBRYO DEFECTIVE 140 )
HSP 1 Score: 63.2 bits (152), Expect = 1.3e-09
Identity = 84/353 (23.80%), Postives = 143/353 (40.51%), Query Frame = 0
Query: 245 ANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDK 304
AN +++A+ I+ K A N+ K+R+ +A A FPL W ++A EA +++
Sbjct: 61 ANPYNYDAYVQYIKLLRKTA--NLEKLRQAREAMSAIFPLSPSLWLEWARDEASLAASEN 120
Query: 305 VVEV---YERAVHGVTYSVDIWLHYCIFTL----STYGDP----ETIRRLFERGLAYVGT 364
V E+ YER + SV +W Y F L S G P +R LFER + G
Sbjct: 121 VPEIVMLYERGLSDY-QSVSLWCDYLSFMLEFDPSVRGYPSEGISKMRSLFERAIPAAGF 180
Query: 365 DYL-SFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELK 424
+W+ Y E+E G LA I +E N+Q+ R + F + PL L
Sbjct: 181 HVTEGNRIWEGYREFEQ-----GVLATIDEADIEERNKQIQRIRSIFHR-HLSVPLENLS 240
Query: 425 SSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKE 484
S+ A + E G ++ + G D ++ S + A KKA++
Sbjct: 241 STLIAYKTWELEQG--IDLDIGSDDLSKVSHQVAVAN------------------KKAQQ 300
Query: 485 FDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVSYLPNHLSVRQGGS 544
S+ E I + + + + +Y+ F + GD +V + S
Sbjct: 301 MYSERAHLEENISKQDLS----DTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVS 360
Query: 545 LISYLRGLSILLRSISVVK----LYERCVIACANYPEYWVRYILYMQASDSMD 582
++ L +++ V K Y R +C + W RY+L ++ + +
Sbjct: 361 SDLWIDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDLWARYLLALERGSASE 380
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7025249.1 | 0.0e+00 | 100.00 | Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. argyrosper... | [more] |
XP_023514088.1 | 0.0e+00 | 95.36 | pre-mRNA-processing factor 39-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_023004937.1 | 0.0e+00 | 95.01 | pre-mRNA-processing factor 39 isoform X1 [Cucurbita maxima] | [more] |
XP_038876250.1 | 0.0e+00 | 89.33 | pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida] >XP_038876251.1 pre... | [more] |
KAG6592841.1 | 0.0e+00 | 95.78 | Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q4KLU2 | 3.2e-69 | 31.60 | Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1 | [more] |
Q1JPZ7 | 2.5e-66 | 29.40 | Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2 | [more] |
Q86UA1 | 2.0e-63 | 28.92 | Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3 | [more] |
Q8K2Z2 | 5.5e-61 | 29.86 | Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3 | [more] |
O74970 | 1.6e-60 | 32.77 | Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KRS7 | 0.0e+00 | 95.01 | pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149... | [more] |
A0A1S3CBE2 | 0.0e+00 | 89.10 | pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921... | [more] |
A0A6J1L0W1 | 0.0e+00 | 95.53 | pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149... | [more] |
A0A6J1H6A4 | 0.0e+00 | 95.53 | pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846... | [more] |
A0A1S3CBV2 | 0.0e+00 | 88.98 | pre-mRNA-processing factor 39 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498921... | [more] |
Match Name | E-value | Identity | Description | |
AT1G04080.3 | 2.7e-257 | 58.09 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G04080.1 | 6.1e-257 | 59.20 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G04080.2 | 2.0e-191 | 58.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G46400.1 | 4.3e-109 | 37.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G24270.1 | 1.3e-09 | 23.80 | EMBRYO DEFECTIVE 140 | [more] |