Carg03770 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03770
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	V-type proton ATPase subunit G
Location	Carg_Chr14: 871485 .. 872445 (-)
RNA-Seq Expression	Carg03770
Synteny	Carg03770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCATTTTCTTTTTATAGGAGAATATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGGTAAACTTGCTCTTGGTTTATTTTATTTTGTTATATATGTTTAACATTCATATGCATGTAAAATTTGTTATTTGGTCCATATAGGTTGATTTCCTCGAATTGCATTTAGTTCCATACTTCAGTTCATAATTTGCTTGACATGAGTTTGTGAAGTGTGAAGAAGGATCATTATCATCTCCTCTTTTCCCGTTATTGATCTACTTTTTTCTCATTGCTTTATGAACCTGTTGAAGTTAGACATAATTTATAACTCAACAACTTGATTTTCCTTTTCTTTTAGCAAAATTGGCTAGACTGAAACAGGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGGTTAGTATAGAATTATTATTACAAACACACATTGTCTCTTGTTGTGTAAAAACCATCCTGATATGTTAAAATATCCGCTAACTCTACTCTTGCTTCCCCATCTCATCTTCATCCTTTGATCATACAGAGTAGCGGAGATTCGGGAGCTAACGTTAAGCGGCTCGAAGTCGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGAACTTCTTGATCTTAAAAGGTTGCAGTAAGAACCTCTAAATTATGCTATTCTTTTTGTGGTGCCTGGAAACGGCTTAAATTGCATGTGTATTATGGAGATGAAATCCTTTCCTTTGTATGGAATCAGTCAGCATTTTGCAGACTGCACTCTGTTGTTGAATAAAACATAATTTCATTCAATGTTCAGTGCTATGTTTTATC

mRNA sequence

GTCATTTTCTTTTTATAGGAGAATATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAGGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGAGTAGCGGAGATTCGGGAGCTAACGTTAAGCGGCTCGAAGTCGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGAACTTCTTGATCTTAAAAGGTTGCAGTAAGAACCTCTAAATTATGCTATTCTTTTTGTGGTGCCTGGAAACGGCTTAAATTGCATGTGTATTATGGAGATGAAATCCTTTCCTTTGTATGGAATCAGTCAGCATTTTGCAGACTGCACTCTGTTGTTGAATAAAACATAATTTCATTCAATGTTCAGTGCTATGTTTTATC

Coding sequence (CDS)

ATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCTGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAGGCCAAAGAAGAGGCTGAAAGGGAAATTGCTGCATATCGAGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTCACTGAGAGTAGCGGAGATTCGGGAGCTAACGTTAAGCGGCTCGAAGTCGAGACAGACATAAAGATTCAAAACCTGAAAGAAGAGTCTGCTAGAATTTCACACGATGTTGTGAACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGA

Protein sequence

MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN

Homology

[Close]

BLAST of Carg03770 vs. NCBI nr
Match: XP_023528337.1 (V-type proton ATPase subunit G-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023528338.1 V-type proton ATPase subunit G-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7017358.1 V-type proton ATPase subunit G [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197.6 bits (501), Expect = 5.6e-47
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN
Sbjct: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. NCBI nr
Match: KAG6580602.1 (V-type proton ATPase subunit G, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197.6 bits (501), Expect = 5.6e-47
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL
Sbjct: 51  MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 110

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN
Sbjct: 111 TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 159

[Close]

BLAST of Carg03770 vs. NCBI nr
Match: XP_023528336.1 (V-type proton ATPase subunit G1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.6 bits (501), Expect = 5.6e-47
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL
Sbjct: 27  MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 86

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN
Sbjct: 87  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 135

[Close]

BLAST of Carg03770 vs. NCBI nr
Match: XP_022934615.1 (V-type proton ATPase subunit G-like [Cucurbita moschata] >XP_022934616.1 V-type proton ATPase subunit G-like [Cucurbita moschata] >XP_022984083.1 V-type proton ATPase subunit G-like [Cucurbita maxima] >XP_022984085.1 V-type proton ATPase subunit G-like [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 7.3e-47
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           TESSGDSGANVKRLEVETD+KIQNLKEESARISHDVVNMLLKHVTTVKN
Sbjct: 61  TESSGDSGANVKRLEVETDVKIQNLKEESARISHDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. NCBI nr
Match: XP_038904095.1 (V-type proton ATPase subunit G1-like [Benincasa hispida] >XP_038904096.1 V-type proton ATPase subunit G1-like [Benincasa hispida] >XP_038904097.1 V-type proton ATPase subunit G1-like [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAE+EIAAYRAQVE+EFQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEKEIAAYRAQVEAEFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           +ESSGDSGANVKRLE+ETD KI  LKEESARISHDVVNMLLKHVTTVKN
Sbjct: 61  SESSGDSGANVKRLEIETDEKIYQLKEESARISHDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. ExPASy Swiss-Prot
Match: Q9SP55 (V-type proton ATPase subunit G OS=Citrus limon OX=2708 GN=VATG PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-37
Identity = 86/108 (79.63%), Postives = 94/108 (87.04%), Query Frame = 0


Query: 2   ATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLT 61
           + RGQGGIQQLLAAEQEAQHIV AARNAK+ARLKQAKEEAEREIA YRAQVE EFQRKL 
Sbjct: 3   SNRGQGGIQQLLAAEQEAQHIVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLA 62

Query: 62  ESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           ES GDSGANVKRLE ET++KI +LK  + +I +DVV M LKHVTTVKN
Sbjct: 63  ESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110

[Close]

BLAST of Carg03770 vs. ExPASy Swiss-Prot
Match: O82628 (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana OX=3702 GN=VHA-G1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.5e-37
Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0


Query: 2   ATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLT 61
           + RGQG IQQLLAAE EAQHIVNAAR AK+ARLKQAKEEAE+EIA Y+AQ E +FQRKL 
Sbjct: 3   SNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLE 62

Query: 62  ESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           E+SGDSGANVKRLE ETD KI+ LK E++RIS DVV MLLKHVTTVKN
Sbjct: 63  ETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110

[Close]

BLAST of Carg03770 vs. ExPASy Swiss-Prot
Match: O82702 (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum OX=4097 GN=VATG1 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.4e-34
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 2   ATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLT 61
           ++ GQ GIQ LLAAEQEAQHIVN AR AK ARLKQAKEEAE+EIA +RA +E+EFQRKL 
Sbjct: 3   SSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRKLE 62

Query: 62  ESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           ++SGDSGANVKRLE ETD KI++LK E+ R+S DVV MLL+HVTTVKN
Sbjct: 63  QTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110

[Close]

BLAST of Carg03770 vs. ExPASy Swiss-Prot
Match: O82703 (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum OX=4097 GN=VATG2 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30
Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 6   QGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSG 65
           Q GIQ LL AEQEAQHIVNAAR  K AR+KQAKEEAE+EIA +RA +E+EFQR + ++SG
Sbjct: 8   QNGIQLLLGAEQEAQHIVNAARTGKQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSG 67

Query: 66  DSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           DSGANVKRLE ET  KIQ+LK E+  ISHDVV MLL+ VTTVKN
Sbjct: 68  DSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111

[Close]

BLAST of Carg03770 vs. ExPASy Swiss-Prot
Match: O82629 (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana OX=3702 GN=VHA-G2 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-29
Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 8   GIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSGDS 67
           GIQQLLAAE+EAQ IVNAAR AK+ RLKQAKEEAE E+A ++   E  FQRKL  +SGDS
Sbjct: 5   GIQQLLAAEREAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDS 64

Query: 68  GANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           GANVKRLE ETD KI+ LK E+ RIS DVV+MLLK+VTTV N
Sbjct: 65  GANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106

[Close]

BLAST of Carg03770 vs. ExPASy TrEMBL
Match: A0A6J1J7Q3 (V-type proton ATPase subunit G OS=Cucurbita maxima OX=3661 GN=LOC111482504 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.5e-47
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           TESSGDSGANVKRLEVETD+KIQNLKEESARISHDVVNMLLKHVTTVKN
Sbjct: 61  TESSGDSGANVKRLEVETDVKIQNLKEESARISHDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. ExPASy TrEMBL
Match: A0A6J1F876 (V-type proton ATPase subunit G OS=Cucurbita moschata OX=3662 GN=LOC111441750 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.5e-47
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           TESSGDSGANVKRLEVETD+KIQNLKEESARISHDVVNMLLKHVTTVKN
Sbjct: 61  TESSGDSGANVKRLEVETDVKIQNLKEESARISHDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. ExPASy TrEMBL
Match: A0A6J1H723 (probable E3 ubiquitin-protein ligase LUL2 OS=Cucurbita moschata OX=3662 GN=LOC111461062 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.3e-43
Identity = 101/109 (92.66%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAE+EIAAYRAQVE+EFQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEKEIAAYRAQVEAEFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           +ESSGDSGANVKRLEVETD KI +LKEESARIS+DVV+MLLKHVTTVKN
Sbjct: 61  SESSGDSGANVKRLEVETDAKIAHLKEESARISYDVVDMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. ExPASy TrEMBL
Match: A0A5D3DNB2 (V-type proton ATPase subunit G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002510 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 100/109 (91.74%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEA++EIAAYRAQVES+FQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEADKEIAAYRAQVESDFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
            ESSGDSGANVKRLE+ETD KI +LKEESARIS DVVNMLLKHVTTVKN
Sbjct: 61  AESSGDSGANVKRLEIETDEKIYHLKEESARISQDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. ExPASy TrEMBL
Match: A0A1S3B690 (V-type proton ATPase subunit G OS=Cucumis melo OX=3656 GN=LOC103486476 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 100/109 (91.74%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKL 60
           MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEA++EIAAYRAQVES+FQRKL
Sbjct: 1   MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEADKEIAAYRAQVESDFQRKL 60

Query: 61  TESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
            ESSGDSGANVKRLE+ETD KI +LKEESARIS DVVNMLLKHVTTVKN
Sbjct: 61  AESSGDSGANVKRLEIETDEKIYHLKEESARISQDVVNMLLKHVTTVKN 109

[Close]

BLAST of Carg03770 vs. TAIR 10
Match: AT3G01390.1 (vacuolar membrane ATPase 10 )

HSP 1 Score: 154.8 bits (390), Expect = 3.9e-38
Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0


Query: 2   ATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLT 61
           + RGQG IQQLLAAE EAQHIVNAAR AK+ARLKQAKEEAE+EIA Y+AQ E +FQRKL 
Sbjct: 3   SNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLE 62

Query: 62  ESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           E+SGDSGANVKRLE ETD KI+ LK E++RIS DVV MLLKHVTTVKN
Sbjct: 63  ETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110

[Close]

BLAST of Carg03770 vs. TAIR 10
Match: AT3G01390.2 (vacuolar membrane ATPase 10 )

HSP 1 Score: 154.8 bits (390), Expect = 3.9e-38
Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0


Query: 2   ATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLT 61
           + RGQG IQQLLAAE EAQHIVNAAR AK+ARLKQAKEEAE+EIA Y+AQ E +FQRKL 
Sbjct: 3   SNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLE 62

Query: 62  ESSGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           E+SGDSGANVKRLE ETD KI+ LK E++RIS DVV MLLKHVTTVKN
Sbjct: 63  ETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110

[Close]

BLAST of Carg03770 vs. TAIR 10
Match: AT4G23710.1 (vacuolar ATP synthase subunit G2 )

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 8   GIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTESSGDS 67
           GIQQLLAAE+EAQ IVNAAR AK+ RLKQAKEEAE E+A ++   E  FQRKL  +SGDS
Sbjct: 5   GIQQLLAAEREAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDS 64

Query: 68  GANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTTVKN 110
           GANVKRLE ETD KI+ LK E+ RIS DVV+MLLK+VTTV N
Sbjct: 65  GANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106

[Close]

BLAST of Carg03770 vs. TAIR 10
Match: AT4G25950.1 (vacuolar ATP synthase G3 )

HSP 1 Score: 110.5 bits (275), Expect = 8.4e-25
Identity = 61/103 (59.22%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 4   RGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEREIAAYRAQVESEFQRKLTES 63
           RGQGGIQ LL AEQEA  IV+AAR AKLAR+KQAK+EAE+E+  YR+++E E+Q ++  S
Sbjct: 5   RGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQV--S 64

Query: 64  SGDSGANVKRLEVETDIKIQNLKEESARISHDVVNMLLKHVTT 107
             D  A+ KRL+ ETD++I NLKE S+++S D+V ML+K+VTT
Sbjct: 65  GTDQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105

The following BLAST results are available for this feature:

BLAST of Carg03770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528337.1	5.6e-47	100.00	V-type proton ATPase subunit G-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_...	[more]
KAG6580602.1	5.6e-47	100.00	V-type proton ATPase subunit G, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023528336.1	5.6e-47	100.00	V-type proton ATPase subunit G1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022934615.1	7.3e-47	99.08	V-type proton ATPase subunit G-like [Cucurbita moschata] >XP_022934616.1 V-type ...	[more]
XP_038904095.1	1.7e-43	93.58	V-type proton ATPase subunit G1-like [Benincasa hispida] >XP_038904096.1 V-type ...	[more]

BLAST of Carg03770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SP55	3.2e-37	79.63	V-type proton ATPase subunit G OS=Citrus limon OX=2708 GN=VATG PE=3 SV=1	[more]
O82628	5.5e-37	78.70	V-type proton ATPase subunit G1 OS=Arabidopsis thaliana OX=3702 GN=VHA-G1 PE=1 S...	[more]
O82702	7.4e-34	74.07	V-type proton ATPase subunit G 1 OS=Nicotiana tabacum OX=4097 GN=VATG1 PE=3 SV=1	[more]
O82703	1.3e-30	72.12	V-type proton ATPase subunit G 2 OS=Nicotiana tabacum OX=4097 GN=VATG2 PE=3 SV=1	[more]
O82629	1.9e-29	71.57	V-type proton ATPase subunit G2 OS=Arabidopsis thaliana OX=3702 GN=VHA-G2 PE=1 S...	[more]

BLAST of Carg03770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7Q3	3.5e-47	99.08	V-type proton ATPase subunit G OS=Cucurbita maxima OX=3661 GN=LOC111482504 PE=3 ...	[more]
A0A6J1F876	3.5e-47	99.08	V-type proton ATPase subunit G OS=Cucurbita moschata OX=3662 GN=LOC111441750 PE=...	[more]
A0A6J1H723	5.3e-43	92.66	probable E3 ubiquitin-protein ligase LUL2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A5D3DNB2	1.5e-42	91.74	V-type proton ATPase subunit G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B690	1.5e-42	91.74	V-type proton ATPase subunit G OS=Cucumis melo OX=3656 GN=LOC103486476 PE=3 SV=1	[more]

BLAST of Carg03770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01390.1	3.9e-38	78.70	vacuolar membrane ATPase 10	[more]
AT3G01390.2	3.9e-38	78.70	vacuolar membrane ATPase 10	[more]
AT4G23710.1	1.3e-30	71.57	vacuolar ATP synthase subunit G2	[more]
AT4G25950.1	8.4e-25	59.22	vacuolar ATP synthase G3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..58
None	No IPR available	GENE3D	1.20.5.2950		coord: 1..109 e-value: 1.5E-33 score: 117.4
None	No IPR available	PANTHER	PTHR12713:SF28	V-TYPE PROTON ATPASE SUBUNIT G1	coord: 2..109
IPR005124	Vacuolar (H+)-ATPase G subunit	PFAM	PF03179	V-ATPase_G	coord: 6..108 e-value: 5.7E-33 score: 113.6
IPR005124	Vacuolar (H+)-ATPase G subunit	TIGRFAM	TIGR01147	TIGR01147	coord: 1..108 e-value: 1.7E-24 score: 84.5
IPR005124	Vacuolar (H+)-ATPase G subunit	PANTHER	PTHR12713	VACUOLAR ATP SYNTHASE SUBUNIT G	coord: 2..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03770-RA	Carg03770-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016471	vacuolar proton-transporting V-type ATPase complex
molecular_function	GO:0042626	ATPase-coupled transmembrane transporter activity