Carg03726 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03726
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	pistil-specific extensin-like protein
Location	Carg_Chr14: 1076266 .. 1077018 (-)
RNA-Seq Expression	Carg03726
Synteny	Carg03726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCTCTATTGCGGCTCACAATGGCGGCTTCTGTTCTAATCGGCTGCATCAACATTGTAGCAGCGACGAACGAATACGACATCATTCATATCGGCGGAAAAGTTCTCTGCCAGGACTGCACCCAGGGGTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGGTAATACAGAATTATTAGGGAACAAATTCCACCTTTAAAATTGCAATCGCTTTCTCCGATTATGTTAATCTTCGACGATCTGGATTGCAGATTGTAAGGTATCTGTAACGTGTTTGGACGAGAGAAGCAGAGTGATACACTATACGAGTGATCTAACCGACGAATTAGGGCAATTTGATATCAAAATGGAAAAGGTGATGCACGGCAAGAATTTGAACCCCAAGAAATGCTCGGTTCGGCTAGTTTCGTCTCCGGATCCGTCCTGCAACACCATGACTGATTTTGCCGGCGGCCGCTCTGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTGGTCAAGTATGTGCTAGAACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAGATGGCTCCGATGATAACGGTGGGGGGAGTAATTACTGAAACTCCTCTTTTTTTTTGTTCTGCATTCCAACTTTGCTGTTACTGATCTTGTGAATCCATCAAATTTATAATATTTTTATCACCATCTTTTTACCTTTTCTGTAATTTCCTAAAATTTCTAAACCCTAAACCCTTTTCCTAAAATTT

mRNA sequence

ATGGGACCTCTATTGCGGCTCACAATGGCGGCTTCTGTTCTAATCGGCTGCATCAACATTGTAGCAGCGACGAACGAATACGACATCATTCATATCGGCGGAAAAGTTCTCTGCCAGGACTGCACCCAGGGGTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGATTGTAAGGTATCTGTAACGTGTTTGGACGAGAGAAGCAGAGTGATACACTATACGAGTGATCTAACCGACGAATTAGGGCAATTTGATATCAAAATGGAAAAGGTGATGCACGGCAAGAATTTGAACCCCAAGAAATGCTCGGTTCGGCTAGTTTCGTCTCCGGATCCGTCCTGCAACACCATGACTGATTTTGCCGGCGGCCGCTCTGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTGGTCAAGTATGTGCTAGAACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAGATGGCTCCGATGATAACGGTGGGGGGAGTAATTACTGAAACTCCTCTTTTTTTTTGTTCTGCATTCCAACTTTGCTGTTACTGATCTTGTGAATCCATCAAATTTATAATATTTTTATCACCATCTTTTTACCTTTTCTGTAATTTCCTAAAATTTCTAAACCCTAAACCCTTTTCCTAAAATTT

Coding sequence (CDS)

ATGGGACCTCTATTGCGGCTCACAATGGCGGCTTCTGTTCTAATCGGCTGCATCAACATTGTAGCAGCGACGAACGAATACGACATCATTCATATCGGCGGAAAAGTTCTCTGCCAGGACTGCACCCAGGGGTGGAACGAGTGGATCAATGGCAAACCGCTCAAAGATTGTAAGGTATCTGTAACGTGTTTGGACGAGAGAAGCAGAGTGATACACTATACGAGTGATCTAACCGACGAATTAGGGCAATTTGATATCAAAATGGAAAAGGTGATGCACGGCAAGAATTTGAACCCCAAGAAATGCTCGGTTCGGCTAGTTTCGTCTCCGGATCCGTCCTGCAACACCATGACTGATTTTGCCGGCGGCCGCTCTGGCGTTCAACTCCGGGGACCGAGCTTGGTGTATCGCGATTTGGTCAAGTATGTGCTAGAACCATTTTACTTCACTTCGCCTATGTGCGAGGAACCTGATACAGATGGCTCCGATGATAACGGTGGGGGGAGTAATTACTGA

Protein sequence

MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDFAGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY

Homology

[Close]

BLAST of Carg03726 vs. NCBI nr
Match: KAG6580646.1 (hypothetical protein SDJN03_20648, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017402.1 hypothetical protein SDJN02_19267, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 3.5e-96
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF
Sbjct: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY
Sbjct: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 171

[Close]

BLAST of Carg03726 vs. NCBI nr
Match: XP_022935176.1 (uncharacterized protein LOC111442130 [Cucurbita moschata])

HSP 1 Score: 361.7 bits (927), Expect = 3.5e-96
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 24  MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 83

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF
Sbjct: 84  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 143

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY
Sbjct: 144 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 194

[Close]

BLAST of Carg03726 vs. NCBI nr
Match: XP_023528335.1 (uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.7 bits (914), Expect = 1.1e-94
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 49  MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 108

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGK LNPKKCSVRLVSSPDPSCNTMTDF
Sbjct: 109 VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKKLNPKKCSVRLVSSPDPSCNTMTDF 168

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSLVYRDLVKYVL PFYFTSPMCEEPDTDGSDDNGGGSNY
Sbjct: 169 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGGGSNY 219

[Close]

BLAST of Carg03726 vs. NCBI nr
Match: XP_022983120.1 (pistil-specific extensin-like protein [Cucurbita maxima])

HSP 1 Score: 353.2 bits (905), Expect = 1.2e-93
Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAASVLIGCINIVAATNEYDIIHI GKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIAGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF
Sbjct: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSLVYRDLVKYVL PFYFTSPMCEEPDTDGSDDNG GSNY
Sbjct: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGVGSNY 171

[Close]

BLAST of Carg03726 vs. NCBI nr
Match: XP_038905672.1 (pistil-specific extensin-like protein [Benincasa hispida])

HSP 1 Score: 314.3 bits (804), Expect = 6.4e-82
Identity = 150/172 (87.21%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNE-YDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKV 60
           MGPLLRLTMAASVLIGCINI+AA NE  D+IHIGGKVLCQDCTQGWNEW NGKPLKDCKV
Sbjct: 1   MGPLLRLTMAASVLIGCINIIAAANEANDVIHIGGKVLCQDCTQGWNEWNNGKPLKDCKV 60

Query: 61  SVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTD 120
           SVTCLDERSRV+HY SDLTDELGQFDI + K +HGK LNPKKCSVRLVSSPDP+CN MTD
Sbjct: 61  SVTCLDERSRVMHYASDLTDELGQFDIAIAKFIHGKKLNPKKCSVRLVSSPDPTCNIMTD 120

Query: 121 FAGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           FAGGRSG+QLRGPSLVYRD VKYVL PFYFTSPMCEEPDTDGSDDN  G NY
Sbjct: 121 FAGGRSGIQLRGPSLVYRDFVKYVLGPFYFTSPMCEEPDTDGSDDN-DGKNY 171

[Close]

BLAST of Carg03726 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.2e-07
Identity = 35/100 (35.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 32  IGGKVLCQDC-TQGWNEWINGKPLKDCKVSVTCLDERSRVIHYTSDLTDELGQFDIKMEK 91
           + G V C+ C + G    +N   L+   V + C  +++ V   T   TD  G+F I M K
Sbjct: 291 VSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKKTMVQWAT---TDNKGEFRI-MPK 350

Query: 92  VMHGKNLNPKKCSVRLVSSPDPSCNTMTDFAGGRSGVQLR 131
            +   ++   KC V LV SP+P+CN  T+F GG+SG  L+
Sbjct: 351 SLTTADVG--KCKVYLVKSPNPNCNVPTNFNGGKSGGLLK 384

[Close]

BLAST of Carg03726 vs. ExPASy TrEMBL
Match: A0A6J1F3T9 (uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC111442130 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.7e-96
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 24  MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 83

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF
Sbjct: 84  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 143

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY
Sbjct: 144 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 194

[Close]

BLAST of Carg03726 vs. ExPASy TrEMBL
Match: A0A6J1J4V1 (pistil-specific extensin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481763 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.0e-94
Identity = 168/171 (98.25%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAASVLIGCINIVAATNEYDIIHI GKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIAGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF
Sbjct: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSLVYRDLVKYVL PFYFTSPMCEEPDTDGSDDNG GSNY
Sbjct: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTDGSDDNGVGSNY 171

[Close]

BLAST of Carg03726 vs. ExPASy TrEMBL
Match: A0A0A0LAP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 146/167 (87.43%), Postives = 153/167 (91.62%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAAS+LIGCINIVAA    D+IHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MGPLLRLTMAASLLIGCINIVAAG---DVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRV+HY SDLTDELGQFDI + K ++GK LNPKKCSVRLVSSPD +CN MTDF
Sbjct: 61  VTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGG 168
           AGGRSGVQLRGPSLVYRDLVKYVL PFYFTSPMCEEPDT GSDDN G
Sbjct: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDG 164

[Close]

BLAST of Carg03726 vs. ExPASy TrEMBL
Match: A0A6J1CSG0 (pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC111014344 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.2e-79
Identity = 143/171 (83.63%), Postives = 153/171 (89.47%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           M PLLRL MAASVLI C NIVAA ++  +IHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MAPLLRLIMAASVLIACTNIVAAADDAGVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRV+HY SDLTDELGQFDI ++K++HGK LNPKKCSVRLVSSPDP+CN MTDF
Sbjct: 61  VTCLDERSRVMHYASDLTDELGQFDITIDKLVHGKKLNPKKCSVRLVSSPDPTCNIMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGGGSNY 172
           AGGRSGVQLRGPSL YRD VKYVL PFYFTSPMCEEP+TD SDDN  G NY
Sbjct: 121 AGGRSGVQLRGPSLTYRDFVKYVLGPFYFTSPMCEEPNTDDSDDN-NGKNY 170

[Close]

BLAST of Carg03726 vs. ExPASy TrEMBL
Match: A0A1S3B787 (pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.4e-79
Identity = 145/167 (86.83%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MGPLLRLTMAASVLIGCINIVAATNEYDIIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60
           MGPLLRLTMAAS+LIGCINIVA     D+IHIGGKVLCQDCTQGWNEWINGKPLKDCKVS
Sbjct: 1   MGPLLRLTMAASLLIGCINIVAGG---DVIHIGGKVLCQDCTQGWNEWINGKPLKDCKVS 60

Query: 61  VTCLDERSRVIHYTSDLTDELGQFDIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDF 120
           VTCLDERSRV+HY SDLTDELGQFDI + K ++GK LNPKKCSVRLVSSPD +CN MTDF
Sbjct: 61  VTCLDERSRVMHYASDLTDELGQFDITINKFINGKKLNPKKCSVRLVSSPDLACNVMTDF 120

Query: 121 AGGRSGVQLRGPSLVYRDLVKYVLEPFYFTSPMCEEPDTDGSDDNGG 168
           AGGRSGVQLRGPSLVYRDLVKYVL PFYFTSPMCEEPDT GSDDN G
Sbjct: 121 AGGRSGVQLRGPSLVYRDLVKYVLGPFYFTSPMCEEPDTSGSDDNDG 164

[Close]

BLAST of Carg03726 vs. TAIR 10
Match: AT3G09925.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45
Identity = 86/149 (57.72%), Postives = 110/149 (73.83%), Query Frame = 0


Query: 14  LIGC---INIVAATNEYDIIHIGGKVLCQDCTQGWNEWING-KPLKDCKVSVTCLDERSR 73
           L+ C   I   AA N  D IH+ GKV+CQDC+  ++EWING +P+K   VS+TC+DER R
Sbjct: 17  LVSCVTHITTTAAYNNGDKIHVAGKVMCQDCSLNYDEWINGSEPIKGAVVSITCMDERRR 76

Query: 74  VIHYTSDLTDELGQFDIKMEKVM-HGKNLNPKKCSVRLVSSPDPSCNTMTDFAGGRSGVQ 133
           V +Y SDLTDE GQFD+ + KV+ HGK L P+ C+VRLVSSPD SCN  T+F  G++GV+
Sbjct: 77  VSYYGSDLTDERGQFDLMVNKVLSHGKVLKPQLCNVRLVSSPDLSCNIPTNFGNGQTGVK 136

Query: 134 LRGPSLVYRDLVKYVLEPFYFTSPMCEEP 158
           L  P  V+RDLVKYV+ PFY+T+PMCE P
Sbjct: 137 LVRPFTVFRDLVKYVVGPFYYTTPMCETP 165

[Close]

BLAST of Carg03726 vs. TAIR 10
Match: AT2G47530.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 5.0e-08
Identity = 44/136 (32.35%), Postives = 65/136 (47.79%), Query Frame = 0


Query: 30  IHIGGKVLCQDCTQGWNEWINGKPLKDCKVSVTC--LDERSRV---IHYTSDLTDELGQF 89
           I I G +LC+    G+  +    P++  KV V C  +D   ++   +  +S  TD  G F
Sbjct: 55  IAIEGFILCK---SGYKTY----PIQGGKVKVVCPVVDSYGKLVAKVTISSYPTDLKGYF 114

Query: 90  DIKMEKVMHGKNLNPKKCSVRLVSSPDPSCNTMTDFAGGRSGVQL---RGPSLVYRDLVK 149
                 + H  N N   C V+L SSP  +C T T+   G +G  L       L + +L  
Sbjct: 115 YFITYGLSHKVN-NISSCKVKLESSPVFTCKTPTNVNKGVTGAPLSPDNSKFLSHDNLTL 174

Query: 150 YVLEPFYFTSPMCEEP 158
           Y LEPFYF+SP+  +P
Sbjct: 175 YTLEPFYFSSPVAPKP 182

[Close]

BLAST of Carg03726 vs. TAIR 10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 46.6 bits (109), Expect = 2.3e-05
Identity = 25/82 (30.49%), Postives = 38/82 (46.34%), Query Frame = 0


Query: 34  GKVLCQDCTQGWNEWINGKPLKDCKVSVTCLDERSRVIHYTSDLTDELGQFDIKMEKVMH 93
           G V C  C  G         +    V+V C+DE S+        TD+ G+F +K+   + 
Sbjct: 44  GTVYCDTCFNGAFSKSPNHLISGALVAVECIDENSKPSFRQEVKTDKRGEFKVKLPFSVS 103

Query: 94  GKNLNPKKCSVRLVSSPDPSCN 116
                 K+CSV+L+SS  P C+
Sbjct: 104 KHVKKIKRCSVKLLSSSQPYCS 125

The following BLAST results are available for this feature:

BLAST of Carg03726 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580646.1	3.5e-96	100.00	hypothetical protein SDJN03_20648, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935176.1	3.5e-96	100.00	uncharacterized protein LOC111442130 [Cucurbita moschata]	[more]
XP_023528335.1	1.1e-94	98.83	uncharacterized protein LOC111791287 [Cucurbita pepo subsp. pepo]	[more]
XP_022983120.1	1.2e-93	98.25	pistil-specific extensin-like protein [Cucurbita maxima]	[more]
XP_038905672.1	6.4e-82	87.21	pistil-specific extensin-like protein [Benincasa hispida]	[more]

BLAST of Carg03726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q03211	9.2e-07	35.00	Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Carg03726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3T9	1.7e-96	100.00	uncharacterized protein LOC111442130 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1J4V1	6.0e-94	98.25	pistil-specific extensin-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148176...	[more]
A0A0A0LAP0	3.2e-79	87.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G746570 PE=4 SV=1	[more]
A0A6J1CSG0	4.2e-79	83.63	pistil-specific extensin-like protein OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A1S3B787	9.4e-79	86.83	pistil-specific extensin-like protein OS=Cucumis melo OX=3656 GN=LOC103486544 PE...	[more]

BLAST of Carg03726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09925.1	3.0e-45	57.72	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G47530.1	5.0e-08	32.35	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G15780.1	2.3e-05	30.49	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 32..126 e-value: 4.6E-21 score: 75.0
None	No IPR available	PANTHER	PTHR33470:SF29	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 8..161
None	No IPR available	PANTHER	PTHR33470	OS01G0164075 PROTEIN	coord: 8..161
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..17 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03726-RA	Carg03726-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071944	cell periphery