Carg03534 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03534
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MYB transcription factor
Location	Carg_Chr14: 2146098 .. 2147089 (-)
RNA-Seq Expression	Carg03534
Synteny	Carg03534

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTTCCTCCCTTCAATCATGCCTTTCCCGGTAATGGGTTGCTTCAAAATCCTGCCTTGATGCCGCCGCCGCCGCCTCCTCTGCCTCTTCCCCTGCCTCCGCCTCTGCCTTGTAGTGATGGAACTGCCATTGTTACTAAAAACAATGCACCCCACCGTCACACCAAGCTTTGTGCTAGAGGCCATTGGAGGCCGGCGGAGGATGCTAAGCTTAAAGAACTCGTCGCCCATTATGGCCCTCAAAACTGGAATCTCATCGCTGAGAATCTCCGTGGCAGATCAGGTACCGTTTTTAGTTCACTAAAAGCTTTGTTTTCACTAAATGTAATCTGGGTTTGAATCGGTTTTTTGTTTGGTGGGTTTAAGGTAAAAGTTGCAGATTGAGATGGTTTAATCAATTGGATCCAAGGATAAACAGAGCAGCGTTCAACGAAGAAGAAGAAGAACGGCTCGTAACAGCTCATAGATTGTATGGAAACAAATGGGCTATGATTGCTCGTTTGTTTCCTGGTAGAACTGATAACGCCGTCAAGAATCATTGGCATGTAATCATGGCTAGAAAACAGAGAAGATCCTTACGAAAGGTCTTTCAGAAAAACAATGTTTCCGGCGAATCCACCATTTCCAGCACCGCCTCTACCTCCGCCGCCTCCAGTAAGTTAAACCCTTTTGAAATCTCTGTTTAGATTAGTGGTTTTTAAGTCTAAATGGGTTGATTGTAGGGTGGTGCGGCGGCATCGGGAAGGTTTGGGGGAAAACAGAGGAGGCGATGACGGCGGAGCAGTCAGGGAACTCTGAGTCGAACTCGGATGTTTCGGCGGCGGAGTCAGTGATTTCAACGAACCTGTGCTTATCATCTGGGTGGGGAAACGGTCGGCGGCGGCAGGATCATATGAAAATGGAGTTCATTGATTTCCTTGGAGTTGGAGCTTCTTGAAATAAAAACCATTGCTTTATCAAACATTCATACAAACTGTTCCTCTGTTTCC

mRNA sequence

ATGAACCTTCCTCCCTTCAATCATGCCTTTCCCGGTAATGGGTTGCTTCAAAATCCTGCCTTGATGCCGCCGCCGCCGCCTCCTCTGCCTCTTCCCCTGCCTCCGCCTCTGCCTTGTAGTGATGGAACTGCCATTGTTACTAAAAACAATGCACCCCACCGTCACACCAAGCTTTGTGCTAGAGGCCATTGGAGGCCGGCGGAGGATGCTAAGCTTAAAGAACTCGTCGCCCATTATGGCCCTCAAAACTGGAATCTCATCGCTGAGAATCTCCGTGGCAGATCAGGTAAAAGTTGCAGATTGAGATGGTTTAATCAATTGGATCCAAGGATAAACAGAGCAGCGTTCAACGAAGAAGAAGAAGAACGGCTCGTAACAGCTCATAGATTGTATGGAAACAAATGGGCTATGATTGCTCGTTTGTTTCCTGGTAGAACTGATAACGCCGTCAAGAATCATTGGCATGTAATCATGGCTAGAAAACAGAGAAGATCCTTACGAAAGGTCTTTCAGAAAAACAATGTTTCCGGCGAATCCACCATTTCCAGCACCGCCTCTACCTCCGCCGCCTCCAGGTGGTGCGGCGGCATCGGGAAGGTTTGGGGGAAAACAGAGGAGGCGATGACGGCGGAGCAGTCAGGGAACTCTGAGTCGAACTCGGATGTTTCGGCGGCGGAGTCAGTGATTTCAACGAACCTGTGCTTATCATCTGGGTGGGGAAACGGTCGGCGGCGGCAGGATCATATGAAAATGGAGTTCATTGATTTCCTTGGAGTTGGAGCTTCTTGAAATAAAAACCATTGCTTTATCAAACATTCATACAAACTGTTCCTCTGTTTCC

Coding sequence (CDS)

ATGAACCTTCCTCCCTTCAATCATGCCTTTCCCGGTAATGGGTTGCTTCAAAATCCTGCCTTGATGCCGCCGCCGCCGCCTCCTCTGCCTCTTCCCCTGCCTCCGCCTCTGCCTTGTAGTGATGGAACTGCCATTGTTACTAAAAACAATGCACCCCACCGTCACACCAAGCTTTGTGCTAGAGGCCATTGGAGGCCGGCGGAGGATGCTAAGCTTAAAGAACTCGTCGCCCATTATGGCCCTCAAAACTGGAATCTCATCGCTGAGAATCTCCGTGGCAGATCAGGTAAAAGTTGCAGATTGAGATGGTTTAATCAATTGGATCCAAGGATAAACAGAGCAGCGTTCAACGAAGAAGAAGAAGAACGGCTCGTAACAGCTCATAGATTGTATGGAAACAAATGGGCTATGATTGCTCGTTTGTTTCCTGGTAGAACTGATAACGCCGTCAAGAATCATTGGCATGTAATCATGGCTAGAAAACAGAGAAGATCCTTACGAAAGGTCTTTCAGAAAAACAATGTTTCCGGCGAATCCACCATTTCCAGCACCGCCTCTACCTCCGCCGCCTCCAGGTGGTGCGGCGGCATCGGGAAGGTTTGGGGGAAAACAGAGGAGGCGATGACGGCGGAGCAGTCAGGGAACTCTGAGTCGAACTCGGATGTTTCGGCGGCGGAGTCAGTGATTTCAACGAACCTGTGCTTATCATCTGGGTGGGGAAACGGTCGGCGGCGGCAGGATCATATGAAAATGGAGTTCATTGATTTCCTTGGAGTTGGAGCTTCTTGA

Protein sequence

MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGESTISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWGNGRRRQDHMKMEFIDFLGVGAS

Homology

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BLAST of Carg03534 vs. NCBI nr
Match: KAG6580836.1 (Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017592.1 Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.7 bits (1384), Expect = 5.5e-149
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240
           ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG
Sbjct: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240

Query: 241 NGRRRQDHMKMEFIDFLGVGAS 263
           NGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 NGRRRQDHMKMEFIDFLGVGAS 262

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BLAST of Carg03534 vs. NCBI nr
Match: XP_022934230.1 (transcription factor MYB56-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 5.1e-147
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALM--PPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKL 60
           MNLPPFNHAFPGNGLLQNPALM  PPPPPPLPLPLPPPLPC+DGTAIVTKNNAPHRHTKL
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPPPLPLPLPPPLPCTDGTAIVTKNNAPHRHTKL 60

Query: 61  CARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNE 120
           CARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNE
Sbjct: 61  CARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNE 120

Query: 121 EEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGE 180
           EEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGE
Sbjct: 121 EEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGE 180

Query: 181 STISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSG 240
           STISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSG
Sbjct: 181 STISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSG 240

Query: 241 WGNGRRRQDHMKMEFIDFLGVGAS 263
           WGNGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 WGNGRRRQDHMKMEFIDFLGVGAS 264

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BLAST of Carg03534 vs. NCBI nr
Match: XP_023528174.1 (transcription factor CSA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143
Identity = 255/262 (97.33%), Postives = 257/262 (98.09%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMPPPPPP   PLPPPLP SDGTAIVTKNNAPHRHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPP---PLPPPLPSSDGTAIVTKNNAPHRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVA YGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVARYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240
           ISSTASTSAASRWCGG+GKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG
Sbjct: 181 ISSTASTSAASRWCGGMGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240

Query: 241 NGRRRQDHMKMEFIDFLGVGAS 263
           NGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 NGRRRQDHMKMEFIDFLGVGAS 259

[Close]

BLAST of Carg03534 vs. NCBI nr
Match: XP_022934231.1 (transcription factor MYB56-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 515.0 bits (1325), Expect = 3.8e-142
Identity = 252/262 (96.18%), Postives = 254/262 (96.95%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMP        PLPPPLPC+DGTAIVTKNNAPHRHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMP--------PLPPPLPCTDGTAIVTKNNAPHRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240
           ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG
Sbjct: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240

Query: 241 NGRRRQDHMKMEFIDFLGVGAS 263
           NGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 NGRRRQDHMKMEFIDFLGVGAS 254

[Close]

BLAST of Carg03534 vs. NCBI nr
Match: XP_022983075.1 (transcription factor MYB56-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 500.7 bits (1288), Expect = 7.4e-138
Identity = 246/262 (93.89%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMP        PLPPPLP SDGTAIVTKNNAP RHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMP--------PLPPPLPSSDGTAIVTKNNAPRRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINR AFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRTAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240
           ISST STSAASRWC G+GKVWGKTEEAM AEQSGNSESNSDVSAAESVISTNLCLSSGWG
Sbjct: 181 ISSTVSTSAASRWCSGMGKVWGKTEEAMAAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240

Query: 241 NGRRRQDHMKMEFIDFLGVGAS 263
           NGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 NGRRRQDHMKMEFIDFLGVGAS 254

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BLAST of Carg03534 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-51
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 53  HRHTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRIN 112
           H      +RGHWRPAED KLKELVA YGPQNWNLIAE L+GRSGKSCRLRWFNQLDPRIN
Sbjct: 99  HSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 158

Query: 113 RAAFNEEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQR 164
           R AF EEEEERL+ AHRLYGNKWAMIARLFPGRTDN+VKNHWHVIMARK R
Sbjct: 159 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFR 209

[Close]

BLAST of Carg03534 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.2e-51
Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAED KLKELV+ YGPQNWNLIAE L+GRSGKSCRLRWFNQLDPRINR AF EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQR 164
           EERL+ AHRLYGNKWAMIARLFPGRTDN+VKNHWHV+MARK R
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR 200

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BLAST of Carg03534 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 9.3e-51
Identity = 104/165 (63.03%), Postives = 115/165 (69.70%), Query Frame = 0


Query: 24  PPPPPLPLPLPPPLPCSDGTAIVTKNNAPHR---HTKLCARGHWRPAEDAKLKELVAHYG 83
           PPPPP    +       +   +       H      KLCARGHWRPAEDAKLK+LVA YG
Sbjct: 13  PPPPPATAAVGE----EEDEVVEETEEGGHGGGVQGKLCARGHWRPAEDAKLKDLVAQYG 72

Query: 84  PQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEEEERLVTAHRLYGNKWAMIAR 143
           PQNWNLIAE L GRSGKSCRLRWFNQLDPRINR AF EEEEERL+ AHR YGNKWA+IAR
Sbjct: 73  PQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMAAHRAYGNKWALIAR 132

Query: 144 LFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGESTISSTA 186
           LFPGRTDNAVKNHWHV+MAR+ R      F++   S  S   + A
Sbjct: 133 LFPGRTDNAVKNHWHVLMARRHREQ-SGAFRRRKPSSSSASPAPA 172

[Close]

BLAST of Carg03534 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 9.3e-51
Identity = 95/133 (71.43%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 55  HTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRA 114
           +TK+C+RGHWRP EDAKLKELVA +GPQNWNLI+ +L GRSGKSCRLRWFNQLDPRIN+ 
Sbjct: 87  NTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKR 146

Query: 115 AFNEEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKN- 174
           AF EEEE RL+ AHR YGNKWA+I+RLFPGRTDNAVKNHWHVIMAR+ R S R+  Q   
Sbjct: 147 AFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQRQRQQPPP 206

Query: 175 --NVSGESTISST 185
             +   E T+SS+
Sbjct: 207 TLSRDAEMTVSSS 219

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BLAST of Carg03534 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-47
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 58  LCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFN 117
           +C+RGHWRPAED KLK+LV  YGP NWN IA  L GRSGKSCRLRWFNQLDPRINR  F 
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 118 EEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSG 177
           EEEEERL+ AHR++GN+W++IARLFPGRTDNAVKNHWHVIMAR+ R++ +     +  S 
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTTSS 122

Query: 178 ESTISS 184
            S ++S
Sbjct: 123 SSLMAS 128

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BLAST of Carg03534 vs. ExPASy TrEMBL
Match: A0A6J1F735 (transcription factor MYB56-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441460 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALM--PPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKL 60
           MNLPPFNHAFPGNGLLQNPALM  PPPPPPLPLPLPPPLPC+DGTAIVTKNNAPHRHTKL
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPPPLPLPLPPPLPCTDGTAIVTKNNAPHRHTKL 60

Query: 61  CARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNE 120
           CARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNE
Sbjct: 61  CARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNE 120

Query: 121 EEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGE 180
           EEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGE
Sbjct: 121 EEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGE 180

Query: 181 STISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSG 240
           STISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSG
Sbjct: 181 STISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSG 240

Query: 241 WGNGRRRQDHMKMEFIDFLGVGAS 263
           WGNGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 WGNGRRRQDHMKMEFIDFLGVGAS 264

[Close]

BLAST of Carg03534 vs. ExPASy TrEMBL
Match: A0A6J1F197 (transcription factor MYB56-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441460 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 1.8e-142
Identity = 252/262 (96.18%), Postives = 254/262 (96.95%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMP        PLPPPLPC+DGTAIVTKNNAPHRHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMP--------PLPPPLPCTDGTAIVTKNNAPHRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240
           ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG
Sbjct: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240

Query: 241 NGRRRQDHMKMEFIDFLGVGAS 263
           NGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 NGRRRQDHMKMEFIDFLGVGAS 254

[Close]

BLAST of Carg03534 vs. ExPASy TrEMBL
Match: A0A6J1J4P4 (transcription factor MYB56-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481730 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.6e-138
Identity = 246/262 (93.89%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMP        PLPPPLP SDGTAIVTKNNAP RHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMP--------PLPPPLPSSDGTAIVTKNNAPRRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINR AFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRTAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGKVWGKTEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240
           ISST STSAASRWC G+GKVWGKTEEAM AEQSGNSESNSDVSAAESVISTNLCLSSGWG
Sbjct: 181 ISSTVSTSAASRWCSGMGKVWGKTEEAMAAEQSGNSESNSDVSAAESVISTNLCLSSGWG 240

Query: 241 NGRRRQDHMKMEFIDFLGVGAS 263
           NGRRRQDHMKMEFIDFLGVGAS
Sbjct: 241 NGRRRQDHMKMEFIDFLGVGAS 254

[Close]

BLAST of Carg03534 vs. ExPASy TrEMBL
Match: A0A6J1J137 (transcription factor MYB56-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481730 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.3e-97
Identity = 180/199 (90.45%), Postives = 182/199 (91.46%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPPLPCSDGTAIVTKNNAPHRHTKLCA 60
           MNLPPFNHAFPGNGLLQNPALMP        PLPPPLP SDGTAIVTKNNAP RHTKLCA
Sbjct: 1   MNLPPFNHAFPGNGLLQNPALMP--------PLPPPLPSSDGTAIVTKNNAPRRHTKLCA 60

Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINR AFNEEE
Sbjct: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRTAFNEEE 120

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSGEST 180
           EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRK+FQKNNVSGEST
Sbjct: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKIFQKNNVSGEST 180

Query: 181 ISSTASTSAASRWCGGIGK 200
           ISST STSAAS   G  G+
Sbjct: 181 ISSTVSTSAASTAWGRYGE 191

[Close]

BLAST of Carg03534 vs. ExPASy TrEMBL
Match: A0A6J1I8Z9 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470258 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.1e-89
Identity = 198/300 (66.00%), Postives = 208/300 (69.33%), Query Frame = 0


Query: 1   MNLPPFNHAFPGNGLLQNPALMPPPPPPLPLPLPPP--------LPCSDGTAIVT--KNN 60
           MNL  FN AF  +G+ QN A M PPPPP  L L PP          C D        K N
Sbjct: 1   MNLQCFNDAFQTHGVFQNVAFM-PPPPPASLDLSPPSHGGHSGRSNCEDREKQEEDGKTN 60

Query: 61  APHRHTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPR 120
              R TKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPR
Sbjct: 61  GARRRTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPR 120

Query: 121 INRAAFNEEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQ-------R 180
           INR AFNEEEEERL+TAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARK        R
Sbjct: 121 INRKAFNEEEEERLLTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKHRQYSNLYR 180

Query: 181 RSLRKVFQKNNVSGESTISSTASTSAAS------------RWC------GGIGKV--WGK 240
           RS RK F K+NVS ESTISST   S AS            RWC       G+GK+  W K
Sbjct: 181 RSSRKAFHKHNVSSESTISSTVDESPASASASAPAPAPAPRWCSRKGVAAGVGKIGCWEK 240

Query: 241 TEEAMTAEQSGNSESNSDVSAAESVISTNLCLSSGWGNGRRRQ-DHMKMEFIDFLGVGAS 263
           TEE M AEQS  S SNS+VS AES ISTNL L+SGW +       HMKM+FIDFLGVGAS
Sbjct: 241 TEEVMAAEQS--SGSNSEVSGAESEISTNLSLASGWESMNGNDGHHMKMQFIDFLGVGAS 297

[Close]

BLAST of Carg03534 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-52
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 53  HRHTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRIN 112
           H      +RGHWRPAED KLKELVA YGPQNWNLIAE L+GRSGKSCRLRWFNQLDPRIN
Sbjct: 99  HSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 158

Query: 113 RAAFNEEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQR 164
           R AF EEEEERL+ AHRLYGNKWAMIARLFPGRTDN+VKNHWHVIMARK R
Sbjct: 159 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFR 209

[Close]

BLAST of Carg03534 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-52
Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAED KLKELV+ YGPQNWNLIAE L+GRSGKSCRLRWFNQLDPRINR AF EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQR 164
           EERL+ AHRLYGNKWAMIARLFPGRTDN+VKNHWHV+MARK R
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR 200

[Close]

BLAST of Carg03534 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-52
Identity = 91/103 (88.35%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 61  RGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFNEEE 120
           RGHWRPAED KLKELV+ YGPQNWNLIAE L+GRSGKSCRLRWFNQLDPRINR AF EEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 121 EERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQR 164
           EERL+ AHRLYGNKWAMIARLFPGRTDN+VKNHWHV+MARK R
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR 200

[Close]

BLAST of Carg03534 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 201.8 bits (512), Expect = 6.6e-52
Identity = 95/133 (71.43%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 55  HTKLCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRA 114
           +TK+C+RGHWRP EDAKLKELVA +GPQNWNLI+ +L GRSGKSCRLRWFNQLDPRIN+ 
Sbjct: 87  NTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKR 146

Query: 115 AFNEEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKN- 174
           AF EEEE RL+ AHR YGNKWA+I+RLFPGRTDNAVKNHWHVIMAR+ R S R+  Q   
Sbjct: 147 AFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQRQRQQPPP 206

Query: 175 --NVSGESTISST 185
             +   E T+SS+
Sbjct: 207 TLSRDAEMTVSSS 219

[Close]

BLAST of Carg03534 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 191.4 bits (485), Expect = 9.0e-49
Identity = 86/126 (68.25%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 58  LCARGHWRPAEDAKLKELVAHYGPQNWNLIAENLRGRSGKSCRLRWFNQLDPRINRAAFN 117
           +C+RGHWRPAED KLK+LV  YGP NWN IA  L GRSGKSCRLRWFNQLDPRINR  F 
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 118 EEEEERLVTAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKQRRSLRKVFQKNNVSG 177
           EEEEERL+ AHR++GN+W++IARLFPGRTDNAVKNHWHVIMAR+ R++ +     +  S 
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTTSS 122

Query: 178 ESTISS 184
            S ++S
Sbjct: 123 SSLMAS 128

The following BLAST results are available for this feature:

BLAST of Carg03534 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580836.1	5.5e-149	100.00	Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_022934230.1	5.1e-147	98.48	transcription factor MYB56-like isoform X1 [Cucurbita moschata]	[more]
XP_023528174.1	2.6e-143	97.33	transcription factor CSA-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934231.1	3.8e-142	96.18	transcription factor MYB56-like isoform X2 [Cucurbita moschata]	[more]
XP_022983075.1	7.4e-138	93.89	transcription factor MYB56-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg03534 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEZ4	2.5e-51	84.68	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q9LQX5	7.2e-51	88.35	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q5NBM8	9.3e-51	63.03	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q6R053	9.3e-51	71.43	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]
Q9FX36	1.3e-47	68.25	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]

BLAST of Carg03534 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F735	2.5e-147	98.48	transcription factor MYB56-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1F197	1.8e-142	96.18	transcription factor MYB56-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J4P4	3.6e-138	93.89	transcription factor MYB56-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1J137	5.3e-97	90.45	transcription factor MYB56-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1I8Z9	1.1e-89	66.00	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470258 PE=4 S...	[more]

BLAST of Carg03534 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69560.1	1.7e-52	84.68	myb domain protein 105	[more]
AT1G26780.1	5.1e-52	88.35	myb domain protein 117	[more]
AT1G26780.2	5.1e-52	88.35	myb domain protein 117	[more]
AT5G17800.1	6.6e-52	71.43	myb domain protein 56	[more]
AT1G73410.1	9.0e-49	68.25	myb domain protein 54	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 112..160 e-value: 4.3E-14 score: 62.8 coord: 60..109 e-value: 4.3E-14 score: 62.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 61..107 score: 10.452568
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 108..158 score: 9.546801
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 64..105 e-value: 1.4399E-12 score: 58.741
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 115..155 e-value: 6.54425E-11 score: 54.1186
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 64..124 e-value: 2.9E-15 score: 56.2
None	No IPR available	GENE3D	1.10.10.60		coord: 61..112 e-value: 7.7E-23 score: 82.2
None	No IPR available	GENE3D	1.10.10.60		coord: 114..183 e-value: 9.9E-18 score: 66.0
None	No IPR available	PANTHER	PTHR45614:SF176	OS08G0435700 PROTEIN	coord: 52..222
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 52..222
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 61..107 score: 19.181158
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 108..162 score: 26.442963
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 61..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03534-RA	Carg03534-RA	mRNA