Carg03532 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03532
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr14: 2158354 .. 2160400 (+)
RNA-Seq Expression	Carg03532
Synteny	Carg03532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAGAAAGCTTGGCAGCGCCTCTCGTTTTCCCTCCGATCATCCTTGGATCACCAGAGCTGGGAGCTTCAAGAACAGTCAAGAACTGGAAGAAGAAGAACGATTTGCGTTCCTCATCAGAAAATGTCCCAACATGAGAGTGCTCCGGCAGCTTCACGCCCACATTCTCACACGCCCACTTCCTCTTTCCACATTTTCCTTCGCGCTTTCCAAAATCACTGTCTTCTGTGCTCTTTCTCCGCTCGGCAACATCGATTATGCCCGCTTAGTTTTCGCTCAAATTTCTCGTCCCAGCATTTTCTCTTGGAATTCTCTGATCAAGGGCTGTTCCAAGATTCAAAACCCTTCCAAGGAACCGATAGCTTTGTTCCAGAAGCTTACTGAAACAGGGTACCCTGTTCCGAACTCCTTCACTATGGCTTTTGTTCTCAAGGCTTGTGCGATTGTTACAGCGTTTGAAGAGGGCTTACAGGTTCATTCCCGTGTTTTGAAAGATGGGTTTGGTAGTAGTTCGTTTGTTCAAACTTCGTTGGTTAACTTTTATGGGAAATGTGAAGAGATTGGTCTTGCCACTAAGGTGTTCGACGAAATGCCTGACAGAAACTTGGTGGCCTGGACTGCGATGATTAGTGGGCATGTGAGAGTTGGAGCAGTGGATGAAGCTATGGGGTTGTTTAGGGAGATGCAGAAGGCCGGGGTTGAGCCGGATGCGGTGACTCTAGTGAGTGTGGTTTCGGCTTGTGCTGCGGCGGGGGCCTTGGATATTGGCAGCTGGGTGCATGCTTATATTGAGAAACGTTCTGTTTTGACCGATCTCGAGCTTGGCACTGCACTTGTAGATATGTATGCTAAATGCGGATGCATTGAGAGGGCGAAGCAGGTCTTTGTTCATATGCCTGTGAGAGATACAAGAGCTTGGAGCTCCATGATTATGGGGTTTGCATATCATGGACTTTCGGAGGATGCCATTGGCGCGTTTCGACAAATGTTGGAAGCTGAGGTAATGTACGAAGATGTACAAATTTCTTAATTGTTAATGAACTTTGAAAAGCTTCAATTACATTCGTGAACTTCCAATTCTACTTCTGATAAGATTAACATTATTGTTTGATCTCTAATGGCACGTTTCTTCCTTTACAAGTTCATTCTTCTGTGTCAGTTCTAGTTTTTGTTTGATAGACATATGCAAGATAAAAACTTGTTATTTCTGTGGTGATTTTCAGGTGATGCCGGACCGTGTAACTTTCATTGGCATTTTATCAGCATGTGCTCACGGTGGAATAGTCTCTGAAGGTCTAAGGTTTTGGTCACTCATGCTTGAATGTGGCATTGAGCCATCAGTTGAGCATTATGGTTGCATAGTTGATTTACTATGCCGAACAGGTCTCGTTGAAGAAGCTTATAGAATCGTTACGACGACAAATATCCCGTCGAATCCTGCAACTTGGCGGAGTTTGCTAAAGGGTTGTAAGAAGAAAAAGCTGTCGAATCTAGGCGAGATCGTCGCAAGGTATCTTCTTCAACTAGAACCCTTAAATGCAGAGAACTATATTGTGATCTCAAATTTATATTCTTCTGTTTCACAATGGGAGAAGATGAGTGAACTAAGAAAGGAGATGAAGGAGAACGGCGTAAAGCCGATACATGGTTGTAGCTCGATCGAAGTCGATGGCGTTGTACATGAGTTTGTGATGGGTGATCAGTCCCATCCAGAGGTGAAAATATTGAGGGAGTTTATGGAAGAGATGGCTAAGCGAGTGTGGGATTCTGGGTATAGACCTAGTGTTTCAGATGTACTTCATAAAGTCATGTATGAAGAGAAAGAAGGGGCTTTAGGTGAGCATAGTGAGAGATTTGCTATTGCATATGGGCTACTAAAAACTAGAGCACCTGTTGTGATTAGGGTAGTGAAGAATCTGAGGGTATGTGGAGATTGCCATGAAGTGATTAAGATAATTAGTAAGATTTATGAAAGGGAAATCATTGTACGAGATCGAGTTCGATTCCATAAGTTCGTCGAGGGTACTTGTTCTTGTAAGGATTACTGG

mRNA sequence

GTAAGAAAGCTTGGCAGCGCCTCTCGTTTTCCCTCCGATCATCCTTGGATCACCAGAGCTGGGAGCTTCAAGAACAGTCAAGAACTGGAAGAAGAAGAACGATTTGCGTTCCTCATCAGAAAATGTCCCAACATGAGAGTGCTCCGGCAGCTTCACGCCCACATTCTCACACGCCCACTTCCTCTTTCCACATTTTCCTTCGCGCTTTCCAAAATCACTGTCTTCTGTGCTCTTTCTCCGCTCGGCAACATCGATTATGCCCGCTTAGTTTTCGCTCAAATTTCTCGTCCCAGCATTTTCTCTTGGAATTCTCTGATCAAGGGCTGTTCCAAGATTCAAAACCCTTCCAAGGAACCGATAGCTTTGTTCCAGAAGCTTACTGAAACAGGGTACCCTGTTCCGAACTCCTTCACTATGGCTTTTGTTCTCAAGGCTTGTGCGATTGTTACAGCGTTTGAAGAGGGCTTACAGGTTCATTCCCGTGTTTTGAAAGATGGGTTTGGTAGTAGTTCGTTTGTTCAAACTTCGTTGGTTAACTTTTATGGGAAATGTGAAGAGATTGGTCTTGCCACTAAGGTGTTCGACGAAATGCCTGACAGAAACTTGGTGGCCTGGACTGCGATGATTAGTGGGCATGTGAGAGTTGGAGCAGTGGATGAAGCTATGGGGTTGTTTAGGGAGATGCAGAAGGCCGGGGTTGAGCCGGATGCGGTGACTCTAGTGAGTGTGGTTTCGGCTTGTGCTGCGGCGGGGGCCTTGGATATTGGCAGCTGGGTGCATGCTTATATTGAGAAACGTTCTGTTTTGACCGATCTCGAGCTTGGCACTGCACTTGTAGATATGTATGCTAAATGCGGATGCATTGAGAGGGCGAAGCAGGTCTTTGTTCATATGCCTGTGAGAGATACAAGAGCTTGGAGCTCCATGATTATGGGGTTTGCATATCATGGACTTTCGGAGGATGCCATTGGCGCGTTTCGACAAATGTTGGAAGCTGAGGTGATGCCGGACCGTGTAACTTTCATTGGCATTTTATCAGCATGTGCTCACGGTGGAATAGTCTCTGAAGGTCTAAGGTTTTGGTCACTCATGCTTGAATGTGGCATTGAGCCATCAGTTGAGCATTATGGTTGCATAGTTGATTTACTATGCCGAACAGGTCTCGTTGAAGAAGCTTATAGAATCGTTACGACGACAAATATCCCGTCGAATCCTGCAACTTGGCGGAGTTTGCTAAAGGGTTGTAAGAAGAAAAAGCTGTCGAATCTAGGCGAGATCGTCGCAAGGTATCTTCTTCAACTAGAACCCTTAAATGCAGAGAACTATATTGTGATCTCAAATTTATATTCTTCTGTTTCACAATGGGAGAAGATGAGTGAACTAAGAAAGGAGATGAAGGAGAACGGCGTAAAGCCGATACATGGTTGTAGCTCGATCGAAGTCGATGGCGTTGTACATGAGTTTGTGATGGGTGATCAGTCCCATCCAGAGGTGAAAATATTGAGGGAGTTTATGGAAGAGATGGCTAAGCGAGTGTGGGATTCTGGGTATAGACCTAGTGTTTCAGATGTACTTCATAAAGTCATGTATGAAGAGAAAGAAGGGGCTTTAGGTGAGCATAGTGAGAGATTTGCTATTGCATATGGGCTACTAAAAACTAGAGCACCTGTTGTGATTAGGGTAGTGAAGAATCTGAGGGTATGTGGAGATTGCCATGAAGTGATTAAGATAATTAGTAAGATTTATGAAAGGGAAATCATTGTACGAGATCGAGTTCGATTCCATAAGTTCGTCGAGGGTACTTGTTCTTGTAAGGATTACTGG

Coding sequence (CDS)

GTAAGAAAGCTTGGCAGCGCCTCTCGTTTTCCCTCCGATCATCCTTGGATCACCAGAGCTGGGAGCTTCAAGAACAGTCAAGAACTGGAAGAAGAAGAACGATTTGCGTTCCTCATCAGAAAATGTCCCAACATGAGAGTGCTCCGGCAGCTTCACGCCCACATTCTCACACGCCCACTTCCTCTTTCCACATTTTCCTTCGCGCTTTCCAAAATCACTGTCTTCTGTGCTCTTTCTCCGCTCGGCAACATCGATTATGCCCGCTTAGTTTTCGCTCAAATTTCTCGTCCCAGCATTTTCTCTTGGAATTCTCTGATCAAGGGCTGTTCCAAGATTCAAAACCCTTCCAAGGAACCGATAGCTTTGTTCCAGAAGCTTACTGAAACAGGGTACCCTGTTCCGAACTCCTTCACTATGGCTTTTGTTCTCAAGGCTTGTGCGATTGTTACAGCGTTTGAAGAGGGCTTACAGGTTCATTCCCGTGTTTTGAAAGATGGGTTTGGTAGTAGTTCGTTTGTTCAAACTTCGTTGGTTAACTTTTATGGGAAATGTGAAGAGATTGGTCTTGCCACTAAGGTGTTCGACGAAATGCCTGACAGAAACTTGGTGGCCTGGACTGCGATGATTAGTGGGCATGTGAGAGTTGGAGCAGTGGATGAAGCTATGGGGTTGTTTAGGGAGATGCAGAAGGCCGGGGTTGAGCCGGATGCGGTGACTCTAGTGAGTGTGGTTTCGGCTTGTGCTGCGGCGGGGGCCTTGGATATTGGCAGCTGGGTGCATGCTTATATTGAGAAACGTTCTGTTTTGACCGATCTCGAGCTTGGCACTGCACTTGTAGATATGTATGCTAAATGCGGATGCATTGAGAGGGCGAAGCAGGTCTTTGTTCATATGCCTGTGAGAGATACAAGAGCTTGGAGCTCCATGATTATGGGGTTTGCATATCATGGACTTTCGGAGGATGCCATTGGCGCGTTTCGACAAATGTTGGAAGCTGAGGTGATGCCGGACCGTGTAACTTTCATTGGCATTTTATCAGCATGTGCTCACGGTGGAATAGTCTCTGAAGGTCTAAGGTTTTGGTCACTCATGCTTGAATGTGGCATTGAGCCATCAGTTGAGCATTATGGTTGCATAGTTGATTTACTATGCCGAACAGGTCTCGTTGAAGAAGCTTATAGAATCGTTACGACGACAAATATCCCGTCGAATCCTGCAACTTGGCGGAGTTTGCTAAAGGGTTGTAAGAAGAAAAAGCTGTCGAATCTAGGCGAGATCGTCGCAAGGTATCTTCTTCAACTAGAACCCTTAAATGCAGAGAACTATATTGTGATCTCAAATTTATATTCTTCTGTTTCACAATGGGAGAAGATGAGTGAACTAAGAAAGGAGATGAAGGAGAACGGCGTAAAGCCGATACATGGTTGTAGCTCGATCGAAGTCGATGGCGTTGTACATGAGTTTGTGATGGGTGATCAGTCCCATCCAGAGGTGAAAATATTGAGGGAGTTTATGGAAGAGATGGCTAAGCGAGTGTGGGATTCTGGGTATAGACCTAGTGTTTCAGATGTACTTCATAAAGTCATGTATGAAGAGAAAGAAGGGGCTTTAGGTGAGCATAGTGAGAGATTTGCTATTGCATATGGGCTACTAAAAACTAGAGCACCTGTTGTGATTAGGGTAGTGAAGAATCTGAGGGTATGTGGAGATTGCCATGAAGTGATTAAGATAATTAGTAAGATTTATGAAAGGGAAATCATTGTACGAGATCGAGTTCGATTCCATAAGTTCGTCGAGGGTACTTGTTCTTGTAAGGATTACTGG

Protein sequence

VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRFWSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW

Homology

[Close]

BLAST of Carg03532 vs. NCBI nr
Match: KAG7017594.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1227.6 bits (3175), Expect = 0.0e+00
Identity = 608/608 (100.00%), Postives = 608/608 (100.00%), Query Frame = 0


Query: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60
           VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL
Sbjct: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60

Query: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120
           PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI
Sbjct: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120

Query: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180
           ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF
Sbjct: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180

Query: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240
           YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL
Sbjct: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240

Query: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300
           VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV
Sbjct: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300

Query: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360
           RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF
Sbjct: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360

Query: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420
           WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL
Sbjct: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420

Query: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480
           SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE
Sbjct: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480

Query: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540
           VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH
Sbjct: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540

Query: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600
           SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG
Sbjct: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600

Query: 601 TCSCKDYW 609
           TCSCKDYW
Sbjct: 601 TCSCKDYW 608

[Close]

BLAST of Carg03532 vs. NCBI nr
Match: XP_022934601.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 603/608 (99.18%), Postives = 603/608 (99.18%), Query Frame = 0


Query: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60
           VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL
Sbjct: 6   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 65

Query: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120
           PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI
Sbjct: 66  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 125

Query: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180
           ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF
Sbjct: 126 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 185

Query: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240
           YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL
Sbjct: 186 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 245

Query: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300
           VSVVSACAAAGALDIGSWVHAYIEK SVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV
Sbjct: 246 VSVVSACAAAGALDIGSWVHAYIEKHSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 305

Query: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360
           RDTRAWSSMIMGFAYHGLSEDAIG FRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF
Sbjct: 306 RDTRAWSSMIMGFAYHGLSEDAIGVFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 365

Query: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420
           WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL
Sbjct: 366 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 425

Query: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480
           SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKEN VKPI GCSSIE
Sbjct: 426 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENDVKPIPGCSSIE 485

Query: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540
           VDGVVHEF MGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH
Sbjct: 486 VDGVVHEFEMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 545

Query: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600
           SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG
Sbjct: 546 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 605

Query: 601 TCSCKDYW 609
           TCSCKDYW
Sbjct: 606 TCSCKDYW 613

[Close]

BLAST of Carg03532 vs. NCBI nr
Match: XP_023528910.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 594/608 (97.70%), Postives = 602/608 (99.01%), Query Frame = 0


Query: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60
           VRKLGSASRFPSDHPWI RAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL
Sbjct: 8   VRKLGSASRFPSDHPWIIRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 67

Query: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120
           P+STFSFALSKIT FCALSPLGNIDYARLVFAQI+RPSIFSWNSLIKGCSKIQNPSKEPI
Sbjct: 68  PVSTFSFALSKITAFCALSPLGNIDYARLVFAQIARPSIFSWNSLIKGCSKIQNPSKEPI 127

Query: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180
           ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVH+RVLKDGFGSSSFVQTSLVNF
Sbjct: 128 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHARVLKDGFGSSSFVQTSLVNF 187

Query: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240
           YGKCEEIGLA KVFDEMP+RNLVAWTAMISGHVRVGA+DEAMGLFREMQKAGVEPDAVTL
Sbjct: 188 YGKCEEIGLAKKVFDEMPERNLVAWTAMISGHVRVGALDEAMGLFREMQKAGVEPDAVTL 247

Query: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300
           VSVVSACA AGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV
Sbjct: 248 VSVVSACALAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 307

Query: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360
           RDTRAWSSMIMGFAYHGLSEDAIGAF+QMLEAEVMPDRVTFIGILSAC+HGGIVSEGLRF
Sbjct: 308 RDTRAWSSMIMGFAYHGLSEDAIGAFQQMLEAEVMPDRVTFIGILSACSHGGIVSEGLRF 367

Query: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420
           WSLMLECGIEPSVEHYGCIVDLLCR+GLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL
Sbjct: 368 WSLMLECGIEPSVEHYGCIVDLLCRSGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 427

Query: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480
            NLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPI GCSSIE
Sbjct: 428 PNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIPGCSSIE 487

Query: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540
           VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH
Sbjct: 488 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 547

Query: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600
           SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG
Sbjct: 548 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 607

Query: 601 TCSCKDYW 609
           TCSCKDYW
Sbjct: 608 TCSCKDYW 615

[Close]

BLAST of Carg03532 vs. NCBI nr
Match: XP_022983378.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 589/608 (96.88%), Postives = 600/608 (98.68%), Query Frame = 0


Query: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60
           VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL
Sbjct: 12  VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 71

Query: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120
           PLSTFSFALSKIT FCALSPLGNIDYARLVFAQI+R SIFSWNSLIKGCSKIQNPSKEPI
Sbjct: 72  PLSTFSFALSKITAFCALSPLGNIDYARLVFAQIARTSIFSWNSLIKGCSKIQNPSKEPI 131

Query: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180
           ALF+KL+ETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF
Sbjct: 132 ALFKKLSETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 191

Query: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240
           YGKCEEIGLA KVFDEMP+RNLVAWTAMISGHVRVGAVDEA+GLFREMQKAG+EPDAVTL
Sbjct: 192 YGKCEEIGLAKKVFDEMPERNLVAWTAMISGHVRVGAVDEALGLFREMQKAGIEPDAVTL 251

Query: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300
           VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIE+AKQVFVHMPV
Sbjct: 252 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIEKAKQVFVHMPV 311

Query: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360
           RDTRAWSSMIMGFAYHGLSEDAI AFRQMLEAEVMPDRVTFIGILSACAHGGIVSEG R 
Sbjct: 312 RDTRAWSSMIMGFAYHGLSEDAIAAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGQRI 371

Query: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420
           WSLMLECGIEPSVEHYGCIVDLLCR+GLVEEAYRIVTTTNIPSNPATWRSLLKGCKKK+L
Sbjct: 372 WSLMLECGIEPSVEHYGCIVDLLCRSGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKRL 431

Query: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480
           SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKEN VKPI GCSSIE
Sbjct: 432 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENSVKPIPGCSSIE 491

Query: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540
           VDGVVHEFVMGDQSHPEVKILREFMEEMA+RVWDSGYRPSVSDVLHKVMYEEKEGALGEH
Sbjct: 492 VDGVVHEFVMGDQSHPEVKILREFMEEMARRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 551

Query: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600
           SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIK+ISKIYEREIIVRDRVRFHKFVEG
Sbjct: 552 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKMISKIYEREIIVRDRVRFHKFVEG 611

Query: 601 TCSCKDYW 609
           TCSCKDYW
Sbjct: 612 TCSCKDYW 619

[Close]

BLAST of Carg03532 vs. NCBI nr
Match: KAG6580838.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 562/568 (98.94%), Postives = 563/568 (99.12%), Query Frame = 0


Query: 45  MRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNS 104
           MRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNS
Sbjct: 1   MRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNS 60

Query: 105 LIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLK 164
           LIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLK
Sbjct: 61  LIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLK 120

Query: 165 DGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGL 224
           DGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGL
Sbjct: 121 DGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGL 180

Query: 225 FREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAK 284
           FREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAK
Sbjct: 181 FREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAK 240

Query: 285 CGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGI 344
           CGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGI
Sbjct: 241 CGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGI 300

Query: 345 LSACAHGGIVSEGLRFWSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSN 404
           LSACAHGGIVSEGLRFWSLMLECGIEPS+EHYGCIVDLLCRTGLVEEAYRIVTTTNIPSN
Sbjct: 301 LSACAHGGIVSEGLRFWSLMLECGIEPSLEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSN 360

Query: 405 PATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKE 464
           PATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKE
Sbjct: 361 PATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKE 420

Query: 465 MKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDV 524
           MKENGVKPI GCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDV
Sbjct: 421 MKENGVKPIPGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDV 480

Query: 525 LHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYER 584
           LHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYER
Sbjct: 481 LHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYER 540

Query: 585 EIIV----RDRVRFHKFVEGTCSCKDYW 609
           EIIV    RDRVRFHKFVEGTCSCKDYW
Sbjct: 541 EIIVRDRDRDRVRFHKFVEGTCSCKDYW 568

[Close]

BLAST of Carg03532 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 475.3 bits (1222), Expect = 1.0e-132
Identity = 255/611 (41.73%), Postives = 369/611 (60.39%), Query Frame = 0


Query: 15  PWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPLPLSTFS-FALSKIT 74
           P I  A S   S      +R   L   C +M  L+QLHA  L    P    + F   KI 
Sbjct: 31  PHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKIL 90

Query: 75  VFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPV 134
                S   +++YA  VF  I   S F WN+LI+ C+   +  +E   L++K+ E G   
Sbjct: 91  QLS--SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 150

Query: 135 PNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKV 194
           P+  T  FVLKACA +  F EG QVH +++K GFG   +V   L++ YG C  + LA KV
Sbjct: 151 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 210

Query: 195 FDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGAL 254
           FDEMP+R+LV+W +MI   VR G  D A+ LFREMQ++  EPD  T+ SV+SACA  G+L
Sbjct: 211 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSL 270

Query: 255 DIGSWVHAYIEKR---SVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMI 314
            +G+W HA++ ++    V  D+ +  +L++MY KCG +  A+QVF  M  RD  +W++MI
Sbjct: 271 SLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMI 330

Query: 315 MGFAYHGLSEDAIGAFRQMLE--AEVMPDRVTFIGILSACAHGGIVSEGLRFWSLML-EC 374
           +GFA HG +E+A+  F +M++    V P+ VTF+G+L AC H G V++G +++ +M+ + 
Sbjct: 331 LGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDY 390

Query: 375 GIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLS-NLGEI 434
            IEP++EHYGCIVDL+ R G + EA  +V +  +  +   WRSLL  C KK  S  L E 
Sbjct: 391 CIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEE 450

Query: 435 VARYLLQLEPLNAEN-------YIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSI 494
           +AR ++  +  N  +       Y+++S +Y+S S+W  +  +RK M E+G++   GCSSI
Sbjct: 451 IARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 510

Query: 495 EVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRP--SVSDVLHKVMYEEKEGAL 554
           E++G+ HEF  GD SHP+ K + + ++ +  R+   GY P  S + ++       KE +L
Sbjct: 511 EINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSL 570

Query: 555 GEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKF 609
             HSER AIA+GL+       IR+ KNLRVC DCHEV K+ISK++  EIIVRDRVRFH F
Sbjct: 571 RLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHF 630

[Close]

BLAST of Carg03532 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 2.3e-129
Identity = 230/604 (38.08%), Postives = 370/604 (61.26%), Query Frame = 0


Query: 39  IRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGN-IDYARLVFAQISRP 98
           +++C     L+Q+HA +L   L     S+A++K   FC  S   + + YA++VF    RP
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQD--SYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 80

Query: 99  SIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQ 158
             F WN +I+G S    P +  + L+Q++  +  P  N++T   +LKAC+ ++AFEE  Q
Sbjct: 81  DTFLWNLMIRGFSCSDEPERS-LLLYQRMLCSSAP-HNAYTFPSLLKACSNLSAFEETTQ 140

Query: 159 VHSRVLKDGFGSSSFVQTSLVNFYG-------------------------------KCEE 218
           +H+++ K G+ +  +   SL+N Y                                K  +
Sbjct: 141 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 200

Query: 219 IGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSA 278
           + +A  +F +M ++N ++WT MISG+V+     EA+ LF EMQ + VEPD V+L + +SA
Sbjct: 201 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 260

Query: 279 CAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAW 338
           CA  GAL+ G W+H+Y+ K  +  D  LG  L+DMYAKCG +E A +VF ++  +  +AW
Sbjct: 261 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 320

Query: 339 SSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEG-LRFWSLML 398
           +++I G+AYHG   +AI  F +M +  + P+ +TF  +L+AC++ G+V EG L F+S+  
Sbjct: 321 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 380

Query: 399 ECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGE 458
           +  ++P++EHYGCIVDLL R GL++EA R +    +  N   W +LLK C+  K   LGE
Sbjct: 381 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 440

Query: 459 IVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVV 518
            +   L+ ++P +   Y+  +N+++   +W+K +E R+ MKE GV  + GCS+I ++G  
Sbjct: 441 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 500

Query: 519 HEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSD-VLHKVMYEEKEGALGEHSERF 578
           HEF+ GD+SHPE++ ++     M +++ ++GY P + + +L  V  +E+E  + +HSE+ 
Sbjct: 501 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 560

Query: 579 AIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSC 609
           AI YGL+KT+   +IR++KNLRVC DCH+V K+ISKIY+R+I++RDR RFH F +G CSC
Sbjct: 561 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 620

[Close]

BLAST of Carg03532 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 6.8e-129
Identity = 247/619 (39.90%), Postives = 362/619 (58.48%), Query Frame = 0


Query: 39  IRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPL--GNIDYARLVFAQISR 98
           I  C  +R L Q+HA  +       T   A ++I  FCA S L   ++DYA  +F Q+ +
Sbjct: 30  INNCRTIRDLSQIHAVFIKSGQMRDT--LAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 89

Query: 99  PSIFSWNSLIKGCSKI-QNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEG 158
            + FSWN++I+G S+  ++ +   I LF ++    +  PN FT   VLKACA     +EG
Sbjct: 90  RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 149

Query: 159 LQVHSRVLKDGFGSSSFVQTSLVNFYGKC-----------------------------EE 218
            Q+H   LK GFG   FV ++LV  Y  C                              E
Sbjct: 150 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 209

Query: 219 IGL----------------ATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQK 278
           I L                A  +FD+M  R++V+W  MISG+   G   +A+ +FREM+K
Sbjct: 210 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 269

Query: 279 AGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIER 338
             + P+ VTLVSV+ A +  G+L++G W+H Y E   +  D  LG+AL+DMY+KCG IE+
Sbjct: 270 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 329

Query: 339 AKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAH 398
           A  VF  +P  +   WS+MI GFA HG + DAI  F +M +A V P  V +I +L+AC+H
Sbjct: 330 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 389

Query: 399 GGIVSEGLRFWSLMLEC-GIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWR 458
           GG+V EG R++S M+   G+EP +EHYGC+VDLL R+GL++EA   +    I  +   W+
Sbjct: 390 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 449

Query: 459 SLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENG 518
           +LL  C+ +    +G+ VA  L+ + P ++  Y+ +SN+Y+S   W ++SE+R  MKE  
Sbjct: 450 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 509

Query: 519 VKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVM 578
           ++   GCS I++DGV+HEFV+ D SHP+ K +   + E++ ++  +GYRP  + VL  + 
Sbjct: 510 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 569

Query: 579 YEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVR 609
            E+KE  L  HSE+ A A+GL+ T     IR+VKNLR+C DCH  IK+ISK+Y+R+I VR
Sbjct: 570 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 629

[Close]

BLAST of Carg03532 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 459.9 bits (1182), Expect = 4.4e-128
Identity = 235/583 (40.31%), Postives = 361/583 (61.92%), Query Frame = 0


Query: 38  LIRKCPNM---------RVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYAR 97
           ++ KC N+           LRQ+HA  +   + +S        I    +L     + YA 
Sbjct: 14  MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 98  LVFAQISRP-SIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACA 157
            VF++I +P ++F WN+LI+G ++I N S    +L++++  +G   P++ T  F++KA  
Sbjct: 74  KVFSKIEKPINVFIWNTLIRGYAEIGN-SISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 133

Query: 158 IVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTA 217
            +     G  +HS V++ GFGS  +VQ SL++ Y  C ++  A KVFD+MP+++LVAW +
Sbjct: 134 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 193

Query: 218 MISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRS 277
           +I+G    G  +EA+ L+ EM   G++PD  T+VS++SACA  GAL +G  VH Y+ K  
Sbjct: 194 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 253

Query: 278 VLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFR 337
           +  +L     L+D+YA+CG +E AK +F  M  +++ +W+S+I+G A +G  ++AI  F+
Sbjct: 254 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 313

Query: 338 QMLEAE-VMPDRVTFIGILSACAHGGIVSEGLRFWSLML-ECGIEPSVEHYGCIVDLLCR 397
            M   E ++P  +TF+GIL AC+H G+V EG  ++  M  E  IEP +EH+GC+VDLL R
Sbjct: 314 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 373

Query: 398 TGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVI 457
            G V++AY  + +  +  N   WR+LL  C     S+L E     +LQLEP ++ +Y+++
Sbjct: 374 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 433

Query: 458 SNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFM 517
           SN+Y+S  +W  + ++RK+M  +GVK + G S +EV   VHEF+MGD+SHP+   +   +
Sbjct: 434 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 493

Query: 518 EEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNL 577
           +EM  R+   GY P +S+V   V  EEKE A+  HSE+ AIA+ L+ T     I VVKNL
Sbjct: 494 KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNL 553

Query: 578 RVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW 609
           RVC DCH  IK++SK+Y REI+VRDR RFH F  G+CSC+DYW
Sbjct: 554 RVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Carg03532 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 456.4 bits (1173), Expect = 4.9e-127
Identity = 237/574 (41.29%), Postives = 356/574 (62.02%), Query Frame = 0


Query: 38  LIRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPL-GNIDYARLVFAQISR 97
           LI KC ++R L Q+ A+ +   +   +F   ++K+  FC  SP   ++ YAR +F  +S 
Sbjct: 35  LISKCNSLRELMQIQAYAIKSHIEDVSF---VAKLINFCTESPTESSMSYARHLFEAMSE 94

Query: 98  PSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGL 157
           P I  +NS+ +G S+  NP  E  +LF ++ E G  +P+++T   +LKACA+  A EEG 
Sbjct: 95  PDIVIFNSMARGYSRFTNP-LEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAKALEEGR 154

Query: 158 QVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVG 217
           Q+H   +K G   + +V  +L+N Y +CE++  A  VFD + +  +V + AMI+G+ R  
Sbjct: 155 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 214

Query: 218 AVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGT 277
             +EA+ LFREMQ   ++P+ +TL+SV+S+CA  G+LD+G W+H Y +K S    +++ T
Sbjct: 215 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 274

Query: 278 ALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMP 337
           AL+DM+AKCG ++ A  +F  M  +DT+AWS+MI+ +A HG +E ++  F +M    V P
Sbjct: 275 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 334

Query: 338 DRVTFIGILSACAHGGIVSEGLRFWSLML-ECGIEPSVEHYGCIVDLLCRTGLVEEAYRI 397
           D +TF+G+L+AC+H G V EG +++S M+ + GI PS++HYG +VDLL R G +E+AY  
Sbjct: 335 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 394

Query: 398 VTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQW 457
           +    I   P  WR LL  C      +L E V+  + +L+  +  +Y+++SNLY+   +W
Sbjct: 395 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKW 454

Query: 458 EKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDS 517
           E +  LRK MK+     + GCSSIEV+ VVHEF  GD        L   ++EM K +  S
Sbjct: 455 EYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLS 514

Query: 518 GYRPSVSDVLHKVMY-EEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEV 577
           GY P  S V+H  M  +EKE  L  HSE+ AI +GLL T     IRVVKNLRVC DCH  
Sbjct: 515 GYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 574

Query: 578 IKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW 609
            K+IS I+ R++++RD  RFH F +G CSC D+W
Sbjct: 575 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]

BLAST of Carg03532 vs. ExPASy TrEMBL
Match: A0A6J1F295 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata OX=3662 GN=LOC111441735 PE=3 SV=1)

HSP 1 Score: 1215.3 bits (3143), Expect = 0.0e+00
Identity = 603/608 (99.18%), Postives = 603/608 (99.18%), Query Frame = 0


Query: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60
           VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL
Sbjct: 6   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 65

Query: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120
           PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI
Sbjct: 66  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 125

Query: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180
           ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF
Sbjct: 126 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 185

Query: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240
           YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL
Sbjct: 186 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 245

Query: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300
           VSVVSACAAAGALDIGSWVHAYIEK SVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV
Sbjct: 246 VSVVSACAAAGALDIGSWVHAYIEKHSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 305

Query: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360
           RDTRAWSSMIMGFAYHGLSEDAIG FRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF
Sbjct: 306 RDTRAWSSMIMGFAYHGLSEDAIGVFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 365

Query: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420
           WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL
Sbjct: 366 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 425

Query: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480
           SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKEN VKPI GCSSIE
Sbjct: 426 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENDVKPIPGCSSIE 485

Query: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540
           VDGVVHEF MGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH
Sbjct: 486 VDGVVHEFEMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 545

Query: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600
           SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG
Sbjct: 546 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 605

Query: 601 TCSCKDYW 609
           TCSCKDYW
Sbjct: 606 TCSCKDYW 613

[Close]

BLAST of Carg03532 vs. ExPASy TrEMBL
Match: A0A6J1J7L0 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481984 PE=3 SV=1)

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 589/608 (96.88%), Postives = 600/608 (98.68%), Query Frame = 0


Query: 1   VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 60
           VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL
Sbjct: 12  VRKLGSASRFPSDHPWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPL 71

Query: 61  PLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPI 120
           PLSTFSFALSKIT FCALSPLGNIDYARLVFAQI+R SIFSWNSLIKGCSKIQNPSKEPI
Sbjct: 72  PLSTFSFALSKITAFCALSPLGNIDYARLVFAQIARTSIFSWNSLIKGCSKIQNPSKEPI 131

Query: 121 ALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 180
           ALF+KL+ETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF
Sbjct: 132 ALFKKLSETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNF 191

Query: 181 YGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTL 240
           YGKCEEIGLA KVFDEMP+RNLVAWTAMISGHVRVGAVDEA+GLFREMQKAG+EPDAVTL
Sbjct: 192 YGKCEEIGLAKKVFDEMPERNLVAWTAMISGHVRVGAVDEALGLFREMQKAGIEPDAVTL 251

Query: 241 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPV 300
           VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIE+AKQVFVHMPV
Sbjct: 252 VSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIEKAKQVFVHMPV 311

Query: 301 RDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRF 360
           RDTRAWSSMIMGFAYHGLSEDAI AFRQMLEAEVMPDRVTFIGILSACAHGGIVSEG R 
Sbjct: 312 RDTRAWSSMIMGFAYHGLSEDAIAAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGQRI 371

Query: 361 WSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKL 420
           WSLMLECGIEPSVEHYGCIVDLLCR+GLVEEAYRIVTTTNIPSNPATWRSLLKGCKKK+L
Sbjct: 372 WSLMLECGIEPSVEHYGCIVDLLCRSGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKRL 431

Query: 421 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIE 480
           SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKEN VKPI GCSSIE
Sbjct: 432 SNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENSVKPIPGCSSIE 491

Query: 481 VDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 540
           VDGVVHEFVMGDQSHPEVKILREFMEEMA+RVWDSGYRPSVSDVLHKVMYEEKEGALGEH
Sbjct: 492 VDGVVHEFVMGDQSHPEVKILREFMEEMARRVWDSGYRPSVSDVLHKVMYEEKEGALGEH 551

Query: 541 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEG 600
           SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIK+ISKIYEREIIVRDRVRFHKFVEG
Sbjct: 552 SERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKMISKIYEREIIVRDRVRFHKFVEG 611

Query: 601 TCSCKDYW 609
           TCSCKDYW
Sbjct: 612 TCSCKDYW 619

[Close]

BLAST of Carg03532 vs. ExPASy TrEMBL
Match: A0A1S3B831 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486823 PE=3 SV=1)

HSP 1 Score: 1008.8 bits (2607), Expect = 9.4e-291
Identity = 495/582 (85.05%), Postives = 530/582 (91.07%), Query Frame = 0


Query: 27  QELEEEERFAFLIRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDY 86
           +ELEEEERFAFL++KCPNMRVLRQLHAHILTRPLPLS+F+FALSKI  FCALSP GNIDY
Sbjct: 4   EELEEEERFAFLVQKCPNMRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNIDY 63

Query: 87  ARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKAC 146
           AR VF QI  P+IFSWNSLIKG S+I  PSKEPI LF+KLTETGYPVPNSFT+AFVLKAC
Sbjct: 64  ARSVFVQIPHPNIFSWNSLIKGYSQIYTPSKEPIFLFKKLTETGYPVPNSFTLAFVLKAC 123

Query: 147 AIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWT 206
           AIV AF EGLQVHS VLKDGFGSS FVQTSLVNFYGKCEEIG A KVFDEMP RNLVAWT
Sbjct: 124 AIVAAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFDEMPVRNLVAWT 183

Query: 207 AMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKR 266
           AMISGH RVGAVDEAMGLFREMQKAGV+PDA+TLVSVVSACA AGALDIG W+HAYIEK 
Sbjct: 184 AMISGHARVGAVDEAMGLFREMQKAGVQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKY 243

Query: 267 SVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAF 326
            VLTDLEL TAL+DMYAKCGCIERAKQVFVHMPV+DT AWSSMIMG AYHGL EDA+ AF
Sbjct: 244 FVLTDLELSTALLDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGLAYHGLVEDAVDAF 303

Query: 327 RQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRFWSLMLECGIEPSVEHYGCIVDLLCRT 386
           +QMLE EVMPD VTF+ +LSACAHGG+VS G RFWSLMLE GIEPSVEHYGC VDLLCR+
Sbjct: 304 QQMLETEVMPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRS 363

Query: 387 GLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVIS 446
           GLVEEAYRI TT  IP N ATWRSLL GCKKKKL NLGEI+ARYLL+LEPLNAENYI+IS
Sbjct: 364 GLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYIMIS 423

Query: 447 NLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFME 506
           NLYSS+SQWEKMSELRK MKE  +KP+ GCSSIEVDGVVHEFVMGDQSHPEVK+LREFM+
Sbjct: 424 NLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKVLREFMK 483

Query: 507 EMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLR 566
           EM+ RV DSGYRPS+SDVLHKV+ EEKE AL EHSERFAIAYGLLKTRAPVVIRVVKNLR
Sbjct: 484 EMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLR 543

Query: 567 VCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW 609
           VC DCHEVIKIISK+YEREIIVRDRVRFHKF++GTCSCKD+W
Sbjct: 544 VCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 585

[Close]

BLAST of Carg03532 vs. ExPASy TrEMBL
Match: A0A6J1DL35 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021527 PE=3 SV=1)

HSP 1 Score: 1003.4 bits (2593), Expect = 4.0e-289
Identity = 491/591 (83.08%), Postives = 539/591 (91.20%), Query Frame = 0


Query: 19  RAGSFKNSQEL-EEEERFAFLIRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCA 78
           R G  + ++EL EEEER A LI+KCPNMR+LRQLHA ILTRPLPLSTFSFALSK+  FCA
Sbjct: 13  RLGEHQKTEELEEEEERLASLIQKCPNMRLLRQLHARILTRPLPLSTFSFALSKVLAFCA 72

Query: 79  LSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSF 138
           LSPLG+I YAR +FAQI  PSIFSWNSLIKGCS+IQNPSKEP+ LF+KL ETGYP PNSF
Sbjct: 73  LSPLGDIHYARTLFAQIPNPSIFSWNSLIKGCSQIQNPSKEPLLLFKKLAETGYPAPNSF 132

Query: 139 TMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEM 198
           T+AFVLKACA+V A  EG+QVH RVL+ GFG S FVQT+LVNFYGKCEEIG+A KVFDEM
Sbjct: 133 TLAFVLKACAVVAALGEGVQVHCRVLRGGFGGSLFVQTALVNFYGKCEEIGVARKVFDEM 192

Query: 199 PDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGS 258
           P+RNLVAWTAMISGH RVGAV+EAMGLFREMQKAGV PDAVTLVSVVSACA AGALDIG 
Sbjct: 193 PERNLVAWTAMISGHTRVGAVNEAMGLFREMQKAGVGPDAVTLVSVVSACAVAGALDIGC 252

Query: 259 WVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHG 318
           W+HAYIEK  V TDLEL TAL+DMYAKCGCIERAKQVF  MPV+DTRAWSSMIMGFA HG
Sbjct: 253 WLHAYIEKYFVSTDLELETALLDMYAKCGCIERAKQVFDSMPVKDTRAWSSMIMGFACHG 312

Query: 319 LSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEGLRFWSLMLECGIEPSVEHYG 378
           LSEDAI AF+QMLEA+VMPD VTFIGILSACAHGG+VSEG R+WSLMLE GIEPSVEHYG
Sbjct: 313 LSEDAIDAFQQMLEAKVMPDHVTFIGILSACAHGGLVSEGRRYWSLMLEFGIEPSVEHYG 372

Query: 379 CIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPL 438
           CIVDLLCR+GLVE+AY+IVTTT IP NPATWRSLL GCKK+KL NLGE+VA YL ++EPL
Sbjct: 373 CIVDLLCRSGLVEDAYKIVTTTTIPPNPATWRSLLTGCKKEKLLNLGEVVAGYLFKIEPL 432

Query: 439 NAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPE 498
           N ENYI++SNLYSSVSQWEKMSELRK+MKE G+KPI GCSSIEVDGVVHEFVM D+SHPE
Sbjct: 433 NPENYILLSNLYSSVSQWEKMSELRKKMKERGIKPIPGCSSIEVDGVVHEFVMSDRSHPE 492

Query: 499 VKILREFMEEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEHSERFAIAYGLLKTRAPV 558
           +K+LREFMEEMA+RV D+GYRPS+SDVLHKV+ EEKEGALGEHSERFAIAYGLLKTRAPV
Sbjct: 493 MKMLREFMEEMAERVRDTGYRPSISDVLHKVVDEEKEGALGEHSERFAIAYGLLKTRAPV 552

Query: 559 VIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW 609
           VIRVVKNLRVCGDCHEVIKI+SKIYEREIIVRDRVRFHKF++GTCSCKD+W
Sbjct: 553 VIRVVKNLRVCGDCHEVIKIVSKIYEREIIVRDRVRFHKFIKGTCSCKDFW 603

[Close]

BLAST of Carg03532 vs. ExPASy TrEMBL
Match: A0A5D3DQ32 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005950 PE=3 SV=1)

HSP 1 Score: 975.7 bits (2521), Expect = 8.8e-281
Identity = 480/564 (85.11%), Postives = 512/564 (90.78%), Query Frame = 0


Query: 45  MRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYARLVFAQISRPSIFSWNS 104
           MRVLRQLHAHILTRPLPLS+F+FALSKI  FCALSP GNIDYAR VF QI  P+IFSWNS
Sbjct: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNIDYARSVFVQIPHPNIFSWNS 60

Query: 105 LIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLK 164
           LIKG S+I  PSKEPI LF+KLTETGYPVPNSFT+AFVLKACAIV AF EGLQVHS VLK
Sbjct: 61  LIKGYSQIYTPSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVAAFGEGLQVHSHVLK 120

Query: 165 DGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGL 224
           DGFGSS FVQTSLVNFYGKCEEIG A KVFDEMP RNLVAWTAMISGH RVGAVDEAMGL
Sbjct: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFDEMPVRNLVAWTAMISGHARVGAVDEAMGL 180

Query: 225 FREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAK 284
           FREMQKAGV+PDA+TLVSVVSACA AGALDIG W+HAYIEK  VLTDLEL TAL+DMYAK
Sbjct: 181 FREMQKAGVQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALLDMYAK 240

Query: 285 CGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGI 344
           CGCIERAKQVFVHMPV+DT AWSSMIMG AYHGL EDA+ AF+QMLE EVMPD VTF+ +
Sbjct: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGLAYHGLVEDAVDAFQQMLETEVMPDHVTFLAV 300

Query: 345 LSACAHGGIVSEGLRFWSLMLECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSN 404
           LSACAHGG+VS G RFWSLMLE GIEPSVEHYGC VDLLCR+GLVEEAYRI TT  IP N
Sbjct: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 360

Query: 405 PATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKE 464
            ATWRSLL GCKKKKL NLGEI+ARYLL+LEPLNAENYI+ISNLYSS+SQWEKMSELRK 
Sbjct: 361 AATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420

Query: 465 MKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDV 524
           MKE  +KP+ GCSSIEVDGVVHEFVMGDQSHPEVK+LREFM+EM+ RV DSGYRPS+SDV
Sbjct: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKVLREFMKEMSMRVRDSGYRPSISDV 480

Query: 525 LHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYER 584
           LHKV+ EEKE AL EHSERFAIAYGLLKTRAPVVIRVVKNLRVC DCHEVIKIISK+YER
Sbjct: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540

Query: 585 EIIVRDRVRFHKFVEGTCSCKDYW 609
           EIIVRDRVRFHKF++GTCSCKD+W
Sbjct: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564

[Close]

BLAST of Carg03532 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 475.3 bits (1222), Expect = 7.2e-134
Identity = 255/611 (41.73%), Postives = 369/611 (60.39%), Query Frame = 0


Query: 15  PWITRAGSFKNSQELEEEERFAFLIRKCPNMRVLRQLHAHILTRPLPLSTFS-FALSKIT 74
           P I  A S   S      +R   L   C +M  L+QLHA  L    P    + F   KI 
Sbjct: 31  PHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKIL 90

Query: 75  VFCALSPLGNIDYARLVFAQISRPSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPV 134
                S   +++YA  VF  I   S F WN+LI+ C+   +  +E   L++K+ E G   
Sbjct: 91  QLS--SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 150

Query: 135 PNSFTMAFVLKACAIVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKV 194
           P+  T  FVLKACA +  F EG QVH +++K GFG   +V   L++ YG C  + LA KV
Sbjct: 151 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 210

Query: 195 FDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGAL 254
           FDEMP+R+LV+W +MI   VR G  D A+ LFREMQ++  EPD  T+ SV+SACA  G+L
Sbjct: 211 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSL 270

Query: 255 DIGSWVHAYIEKR---SVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMI 314
            +G+W HA++ ++    V  D+ +  +L++MY KCG +  A+QVF  M  RD  +W++MI
Sbjct: 271 SLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMI 330

Query: 315 MGFAYHGLSEDAIGAFRQMLE--AEVMPDRVTFIGILSACAHGGIVSEGLRFWSLML-EC 374
           +GFA HG +E+A+  F +M++    V P+ VTF+G+L AC H G V++G +++ +M+ + 
Sbjct: 331 LGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDY 390

Query: 375 GIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLS-NLGEI 434
            IEP++EHYGCIVDL+ R G + EA  +V +  +  +   WRSLL  C KK  S  L E 
Sbjct: 391 CIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEE 450

Query: 435 VARYLLQLEPLNAEN-------YIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSI 494
           +AR ++  +  N  +       Y+++S +Y+S S+W  +  +RK M E+G++   GCSSI
Sbjct: 451 IARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 510

Query: 495 EVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRP--SVSDVLHKVMYEEKEGAL 554
           E++G+ HEF  GD SHP+ K + + ++ +  R+   GY P  S + ++       KE +L
Sbjct: 511 EINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSL 570

Query: 555 GEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKF 609
             HSER AIA+GL+       IR+ KNLRVC DCHEV K+ISK++  EIIVRDRVRFH F
Sbjct: 571 RLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHF 630

[Close]

BLAST of Carg03532 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-130
Identity = 230/604 (38.08%), Postives = 370/604 (61.26%), Query Frame = 0


Query: 39  IRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGN-IDYARLVFAQISRP 98
           +++C     L+Q+HA +L   L     S+A++K   FC  S   + + YA++VF    RP
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQD--SYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 80

Query: 99  SIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQ 158
             F WN +I+G S    P +  + L+Q++  +  P  N++T   +LKAC+ ++AFEE  Q
Sbjct: 81  DTFLWNLMIRGFSCSDEPERS-LLLYQRMLCSSAP-HNAYTFPSLLKACSNLSAFEETTQ 140

Query: 159 VHSRVLKDGFGSSSFVQTSLVNFYG-------------------------------KCEE 218
           +H+++ K G+ +  +   SL+N Y                                K  +
Sbjct: 141 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 200

Query: 219 IGLATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSA 278
           + +A  +F +M ++N ++WT MISG+V+     EA+ LF EMQ + VEPD V+L + +SA
Sbjct: 201 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 260

Query: 279 CAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAW 338
           CA  GAL+ G W+H+Y+ K  +  D  LG  L+DMYAKCG +E A +VF ++  +  +AW
Sbjct: 261 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAW 320

Query: 339 SSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAHGGIVSEG-LRFWSLML 398
           +++I G+AYHG   +AI  F +M +  + P+ +TF  +L+AC++ G+V EG L F+S+  
Sbjct: 321 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 380

Query: 399 ECGIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGE 458
           +  ++P++EHYGCIVDLL R GL++EA R +    +  N   W +LLK C+  K   LGE
Sbjct: 381 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 440

Query: 459 IVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVV 518
            +   L+ ++P +   Y+  +N+++   +W+K +E R+ MKE GV  + GCS+I ++G  
Sbjct: 441 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 500

Query: 519 HEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSD-VLHKVMYEEKEGALGEHSERF 578
           HEF+ GD+SHPE++ ++     M +++ ++GY P + + +L  V  +E+E  + +HSE+ 
Sbjct: 501 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 560

Query: 579 AIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSC 609
           AI YGL+KT+   +IR++KNLRVC DCH+V K+ISKIY+R+I++RDR RFH F +G CSC
Sbjct: 561 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 620

[Close]

BLAST of Carg03532 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 462.6 bits (1189), Expect = 4.8e-130
Identity = 247/619 (39.90%), Postives = 362/619 (58.48%), Query Frame = 0


Query: 39  IRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPL--GNIDYARLVFAQISR 98
           I  C  +R L Q+HA  +       T   A ++I  FCA S L   ++DYA  +F Q+ +
Sbjct: 30  INNCRTIRDLSQIHAVFIKSGQMRDT--LAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 89

Query: 99  PSIFSWNSLIKGCSKI-QNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEG 158
            + FSWN++I+G S+  ++ +   I LF ++    +  PN FT   VLKACA     +EG
Sbjct: 90  RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 149

Query: 159 LQVHSRVLKDGFGSSSFVQTSLVNFYGKC-----------------------------EE 218
            Q+H   LK GFG   FV ++LV  Y  C                              E
Sbjct: 150 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 209

Query: 219 IGL----------------ATKVFDEMPDRNLVAWTAMISGHVRVGAVDEAMGLFREMQK 278
           I L                A  +FD+M  R++V+W  MISG+   G   +A+ +FREM+K
Sbjct: 210 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 269

Query: 279 AGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAKCGCIER 338
             + P+ VTLVSV+ A +  G+L++G W+H Y E   +  D  LG+AL+DMY+KCG IE+
Sbjct: 270 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 329

Query: 339 AKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMPDRVTFIGILSACAH 398
           A  VF  +P  +   WS+MI GFA HG + DAI  F +M +A V P  V +I +L+AC+H
Sbjct: 330 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 389

Query: 399 GGIVSEGLRFWSLMLEC-GIEPSVEHYGCIVDLLCRTGLVEEAYRIVTTTNIPSNPATWR 458
           GG+V EG R++S M+   G+EP +EHYGC+VDLL R+GL++EA   +    I  +   W+
Sbjct: 390 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 449

Query: 459 SLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKEMKENG 518
           +LL  C+ +    +G+ VA  L+ + P ++  Y+ +SN+Y+S   W ++SE+R  MKE  
Sbjct: 450 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 509

Query: 519 VKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDVLHKVM 578
           ++   GCS I++DGV+HEFV+ D SHP+ K +   + E++ ++  +GYRP  + VL  + 
Sbjct: 510 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 569

Query: 579 YEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYEREIIVR 609
            E+KE  L  HSE+ A A+GL+ T     IR+VKNLR+C DCH  IK+ISK+Y+R+I VR
Sbjct: 570 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 629

[Close]

BLAST of Carg03532 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 459.9 bits (1182), Expect = 3.1e-129
Identity = 235/583 (40.31%), Postives = 361/583 (61.92%), Query Frame = 0


Query: 38  LIRKCPNM---------RVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPLGNIDYAR 97
           ++ KC N+           LRQ+HA  +   + +S        I    +L     + YA 
Sbjct: 14  MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 98  LVFAQISRP-SIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACA 157
            VF++I +P ++F WN+LI+G ++I N S    +L++++  +G   P++ T  F++KA  
Sbjct: 74  KVFSKIEKPINVFIWNTLIRGYAEIGN-SISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 133

Query: 158 IVTAFEEGLQVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTA 217
            +     G  +HS V++ GFGS  +VQ SL++ Y  C ++  A KVFD+MP+++LVAW +
Sbjct: 134 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 193

Query: 218 MISGHVRVGAVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRS 277
           +I+G    G  +EA+ L+ EM   G++PD  T+VS++SACA  GAL +G  VH Y+ K  
Sbjct: 194 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 253

Query: 278 VLTDLELGTALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFR 337
           +  +L     L+D+YA+CG +E AK +F  M  +++ +W+S+I+G A +G  ++AI  F+
Sbjct: 254 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 313

Query: 338 QMLEAE-VMPDRVTFIGILSACAHGGIVSEGLRFWSLML-ECGIEPSVEHYGCIVDLLCR 397
            M   E ++P  +TF+GIL AC+H G+V EG  ++  M  E  IEP +EH+GC+VDLL R
Sbjct: 314 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 373

Query: 398 TGLVEEAYRIVTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVI 457
            G V++AY  + +  +  N   WR+LL  C     S+L E     +LQLEP ++ +Y+++
Sbjct: 374 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 433

Query: 458 SNLYSSVSQWEKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFM 517
           SN+Y+S  +W  + ++RK+M  +GVK + G S +EV   VHEF+MGD+SHP+   +   +
Sbjct: 434 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 493

Query: 518 EEMAKRVWDSGYRPSVSDVLHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNL 577
           +EM  R+   GY P +S+V   V  EEKE A+  HSE+ AIA+ L+ T     I VVKNL
Sbjct: 494 KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNL 553

Query: 578 RVCGDCHEVIKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW 609
           RVC DCH  IK++SK+Y REI+VRDR RFH F  G+CSC+DYW
Sbjct: 554 RVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Carg03532 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 456.4 bits (1173), Expect = 3.5e-128
Identity = 237/574 (41.29%), Postives = 356/574 (62.02%), Query Frame = 0


Query: 38  LIRKCPNMRVLRQLHAHILTRPLPLSTFSFALSKITVFCALSPL-GNIDYARLVFAQISR 97
           LI KC ++R L Q+ A+ +   +   +F   ++K+  FC  SP   ++ YAR +F  +S 
Sbjct: 35  LISKCNSLRELMQIQAYAIKSHIEDVSF---VAKLINFCTESPTESSMSYARHLFEAMSE 94

Query: 98  PSIFSWNSLIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGL 157
           P I  +NS+ +G S+  NP  E  +LF ++ E G  +P+++T   +LKACA+  A EEG 
Sbjct: 95  PDIVIFNSMARGYSRFTNP-LEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAKALEEGR 154

Query: 158 QVHSRVLKDGFGSSSFVQTSLVNFYGKCEEIGLATKVFDEMPDRNLVAWTAMISGHVRVG 217
           Q+H   +K G   + +V  +L+N Y +CE++  A  VFD + +  +V + AMI+G+ R  
Sbjct: 155 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRN 214

Query: 218 AVDEAMGLFREMQKAGVEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGT 277
             +EA+ LFREMQ   ++P+ +TL+SV+S+CA  G+LD+G W+H Y +K S    +++ T
Sbjct: 215 RPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 274

Query: 278 ALVDMYAKCGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFRQMLEAEVMP 337
           AL+DM+AKCG ++ A  +F  M  +DT+AWS+MI+ +A HG +E ++  F +M    V P
Sbjct: 275 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 334

Query: 338 DRVTFIGILSACAHGGIVSEGLRFWSLML-ECGIEPSVEHYGCIVDLLCRTGLVEEAYRI 397
           D +TF+G+L+AC+H G V EG +++S M+ + GI PS++HYG +VDLL R G +E+AY  
Sbjct: 335 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 394

Query: 398 VTTTNIPSNPATWRSLLKGCKKKKLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQW 457
           +    I   P  WR LL  C      +L E V+  + +L+  +  +Y+++SNLY+   +W
Sbjct: 395 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKW 454

Query: 458 EKMSELRKEMKENGVKPIHGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDS 517
           E +  LRK MK+     + GCSSIEV+ VVHEF  GD        L   ++EM K +  S
Sbjct: 455 EYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLS 514

Query: 518 GYRPSVSDVLHKVMY-EEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEV 577
           GY P  S V+H  M  +EKE  L  HSE+ AI +GLL T     IRVVKNLRVC DCH  
Sbjct: 515 GYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 574

Query: 578 IKIISKIYEREIIVRDRVRFHKFVEGTCSCKDYW 609
            K+IS I+ R++++RD  RFH F +G CSC D+W
Sbjct: 575 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

The following BLAST results are available for this feature:

BLAST of Carg03532 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017594.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia...	[more]
XP_022934601.1	0.0e+00	99.18	pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata]	[more]
XP_023528910.1	0.0e+00	97.70	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
XP_022983378.1	0.0e+00	96.88	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
KAG6580838.1	0.0e+00	98.94	Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial, partia...	[more]

BLAST of Carg03532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WQW5	1.0e-132	41.73	Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
Q9FJY7	2.3e-129	38.08	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FI80	6.8e-129	39.90	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	4.4e-128	40.31	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q8LK93	4.9e-127	41.29	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop...	[more]

BLAST of Carg03532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F295	0.0e+00	99.18	pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata...	[more]
A0A6J1J7L0	0.0e+00	96.88	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A1S3B831	9.4e-291	85.05	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A6J1DL35	4.0e-289	83.08	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A5D3DQ32	8.8e-281	85.11	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg03532 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59720.1	7.2e-134	41.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G66520.1	1.7e-130	38.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	4.8e-130	39.90	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	3.1e-129	40.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02980.1	3.5e-128	41.29	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 475..597 e-value: 6.3E-37 score: 126.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 375..395 e-value: 1.1 score: 9.7 coord: 276..299 e-value: 0.058 score: 13.7 coord: 447..470 e-value: 0.49 score: 10.8 coord: 305..332 e-value: 4.2E-4 score: 20.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 201..248 e-value: 5.3E-13 score: 48.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 203..237 e-value: 1.2E-8 score: 32.6 coord: 305..337 e-value: 0.0024 score: 15.9 coord: 339..373 e-value: 3.5E-4 score: 18.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 98..133 score: 8.922556
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 438..472 score: 9.196589
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 201..235 score: 13.054966
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 302..336 score: 9.985802
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 337..371 score: 9.832344
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 116..271 e-value: 3.7E-31 score: 110.6 coord: 276..579 e-value: 6.4E-36 score: 126.3
None	No IPR available	PANTHER	PTHR47926:SF147	OS01G0814300 PROTEIN	coord: 44..594
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 44..594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03532-RA	Carg03532-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding