Carg03516 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03516
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	remorin 4.1-like
Location	Carg_Chr14: 2287891 .. 2289126 (-)
RNA-Seq Expression	Carg03516
Synteny	Carg03516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAACGATCAGGCACCAGCGGTAACTTCCAGAGCCAGCCATGGCGGAGACGACGACGATCAAATCCGTGATATTCATGCTCTGACCTCGCCGCAACCACCGCCGGTGACGGCTAATCGGAACCGCCGTGGTGAGGCCTGGGAAACGACGAGTCAGAGATCGACTTCAATGGTTAGCGAAGGCGGCTACAGTGAGAATTTCACCTCCATGAGTCGAGAGTTTAATGCTCTCGTTATCGCTGGCGCGGAGATTGGCGATGATTATCGCCATGATCGACCGATTAACGAAGCTCCAAATAACTTGAGCCGAATCAGAGAGGAAGAGTATACGCCAGAGGAGGAGATGAATCCGTTAGCGATCGTACCAGACGGACATCCGTTCGATGATCACTTAGCGCCGTTGGCGATCTCGAGACAAGAGAACAGGAGAGGCGGCGGCGGCGGCGGCAGTGGTACGGCAGCGACTAGAGAGATTTCGTTGCATATGGTGAAGAAGGAGGAAGTGGAGACGAAGATAAGTGCATGGCAGAACGCGAAGATTGCGAAGATTAACAATCGGTTCAAGAGAGAAGATGCGGTGATCAGTGGATGGGAGAGGGAGCAGGTTCAGAAGGCGTCTTCATGGATGAAGAAAATCGAGGTACGTGAAATTGAAAATTGCGCTTTCTCTGTGCATGTAACCTGTTTGAAGAAATGCCTCGTATCGTGTTTGTGAATATTACTTCTCCTGTTTGGTCAAAAAGTCAATTTATAACGCTTATTTGCATCAAACATGTCAAATCTTCTTAAATCTCAATCACTTTTGAACCAAACTTTCCTATGAACTTTTGAATATCTGAGAAAGAACAATTCTAATTTCTTCTTCCTGTCAATCATTCCATATAAATTTAGATTCATTTTGAAACTTCACACATGAACAAGCTGAATTTATGCAGAGATCATTCCATTGTGGTGAGTAAAAAAACAGAAAAGAAATCAGCATCTTTGTGTATAACATGGATTGGATTGGATTGGATTGAAGTGAAAGTTTGAATTTATGCAGAGAAAATTGGAAGAGAAGAGAGCAAAAGCATTAGAAAAAATGGAGAATGAAGTAGCAAAAGCACACAGAAAAGCAGAGGAAAGAAGAGCATCAGCAGAGGCGAAGAGGGGAACAAAAGTGGCCAAACTCATTGAGATATCAAACTTGATGAGAGCAGTCGGAAGACCACCAGCCAAGCGCTCCTTCTTCTAG

mRNA sequence

ATGTTCAACGATCAGGCACCAGCGGTAACTTCCAGAGCCAGCCATGGCGGAGACGACGACGATCAAATCCGTGATATTCATGCTCTGACCTCGCCGCAACCACCGCCGGTGACGGCTAATCGGAACCGCCGTGGTGAGGCCTGGGAAACGACGAGTCAGAGATCGACTTCAATGGTTAGCGAAGGCGGCTACAGTGAGAATTTCACCTCCATGAGTCGAGAGTTTAATGCTCTCGTTATCGCTGGCGCGGAGATTGGCGATGATTATCGCCATGATCGACCGATTAACGAAGCTCCAAATAACTTGAGCCGAATCAGAGAGGAAGAGTATACGCCAGAGGAGGAGATGAATCCGTTAGCGATCGTACCAGACGGACATCCGTTCGATGATCACTTAGCGCCGTTGGCGATCTCGAGACAAGAGAACAGGAGAGGCGGCGGCGGCGGCGGCAGTGGTACGGCAGCGACTAGAGAGATTTCGTTGCATATGGTGAAGAAGGAGGAAGTGGAGACGAAGATAAGTGCATGGCAGAACGCGAAGATTGCGAAGATTAACAATCGGTTCAAGAGAGAAGATGCGGTGATCAGTGGATGGGAGAGGGAGCAGGTTCAGAAGGCGTCTTCATGGATGAAGAAAATCGAGAGAAAATTGGAAGAGAAGAGAGCAAAAGCATTAGAAAAAATGGAGAATGAAGTAGCAAAAGCACACAGAAAAGCAGAGGAAAGAAGAGCATCAGCAGAGGCGAAGAGGGGAACAAAAGTGGCCAAACTCATTGAGATATCAAACTTGATGAGAGCAGTCGGAAGACCACCAGCCAAGCGCTCCTTCTTCTAG

Coding sequence (CDS)

ATGTTCAACGATCAGGCACCAGCGGTAACTTCCAGAGCCAGCCATGGCGGAGACGACGACGATCAAATCCGTGATATTCATGCTCTGACCTCGCCGCAACCACCGCCGGTGACGGCTAATCGGAACCGCCGTGGTGAGGCCTGGGAAACGACGAGTCAGAGATCGACTTCAATGGTTAGCGAAGGCGGCTACAGTGAGAATTTCACCTCCATGAGTCGAGAGTTTAATGCTCTCGTTATCGCTGGCGCGGAGATTGGCGATGATTATCGCCATGATCGACCGATTAACGAAGCTCCAAATAACTTGAGCCGAATCAGAGAGGAAGAGTATACGCCAGAGGAGGAGATGAATCCGTTAGCGATCGTACCAGACGGACATCCGTTCGATGATCACTTAGCGCCGTTGGCGATCTCGAGACAAGAGAACAGGAGAGGCGGCGGCGGCGGCGGCAGTGGTACGGCAGCGACTAGAGAGATTTCGTTGCATATGGTGAAGAAGGAGGAAGTGGAGACGAAGATAAGTGCATGGCAGAACGCGAAGATTGCGAAGATTAACAATCGGTTCAAGAGAGAAGATGCGGTGATCAGTGGATGGGAGAGGGAGCAGGTTCAGAAGGCGTCTTCATGGATGAAGAAAATCGAGAGAAAATTGGAAGAGAAGAGAGCAAAAGCATTAGAAAAAATGGAGAATGAAGTAGCAAAAGCACACAGAAAAGCAGAGGAAAGAAGAGCATCAGCAGAGGCGAAGAGGGGAACAAAAGTGGCCAAACTCATTGAGATATCAAACTTGATGAGAGCAGTCGGAAGACCACCAGCCAAGCGCTCCTTCTTCTAG

Protein sequence

MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVSEGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLAIVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF

Homology

[Close]

BLAST of Carg03516 vs. NCBI nr
Match: KAG6580855.1 (Remorin 4.2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017610.1 Remorin 4.1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 535.0 bits (1377), Expect = 3.8e-148
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS
Sbjct: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240

Query: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 277

[Close]

BLAST of Carg03516 vs. NCBI nr
Match: XP_023522006.1 (remorin 4.1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526480.1 remorin 4.1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.2 bits (1328), Expect = 1.8e-142
Identity = 271/277 (97.83%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGG+DDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGNDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDD LAPLAISRQENRR  GGGGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDRLAPLAISRQENRR--GGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240

Query: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 275

[Close]

BLAST of Carg03516 vs. NCBI nr
Match: XP_022934075.1 (remorin 4.1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 513.8 bits (1322), Expect = 9.0e-142
Identity = 270/277 (97.47%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGG+DDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGNDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQE RR   GGGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQEYRR---GGGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240

Query: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 274

[Close]

BLAST of Carg03516 vs. NCBI nr
Match: XP_022983669.1 (remorin 4.1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141
Identity = 270/277 (97.47%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYR DRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRRDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQENRR    GGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQENRR----GGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240

Query: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 273

[Close]

BLAST of Carg03516 vs. NCBI nr
Match: XP_022934074.1 (remorin 4.1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 501.9 bits (1291), Expect = 3.5e-138
Identity = 270/297 (90.91%), Postives = 271/297 (91.25%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGG+DDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGNDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQE RR   GGGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQEYRR---GGGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIE--------------------RKLEEK 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIE                    RKLEEK
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIEIHFETSHMNKLNLCRDHSIVRKLEEK 240

Query: 241 RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 294

[Close]

BLAST of Carg03516 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 9.2e-57
Identity = 144/278 (51.80%), Postives = 187/278 (67.27%), Query Frame = 0


Query: 19  DDDQIRDIHALTSPQPP----PVTANRNRRGEAWETTS-QRSTSMVSEG---GYSENFTS 78
           ++ + RDIHAL+ P  P    P ++   RR E+WE+ +  R TS+ S G     SE F +
Sbjct: 52  EEPEFRDIHALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVGSDTAPSELFPT 111

Query: 79  MSREFNALVIAGAEI----------GDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 138
           MSREF+A+V A A            GD  R    +++A   L RI E+E    EE NPLA
Sbjct: 112 MSREFSAMVAAAANANAAAAAAANGGDSSR--AGVDDA---LGRIGEDEL---EETNPLA 171

Query: 139 IVPDGHPF-DDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNA 198
           IVPD +P      A LA+    +    GGG        E+S+  VKKEEVE+KI+AWQ A
Sbjct: 172 IVPDSNPIPSPRRAHLALPAPGDVSSAGGGHGD-----EVSVGQVKKEEVESKIAAWQIA 231

Query: 199 KIAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKA 258
           ++AK+NNRFKRE+ VI+GWE +QV+KA++W+KK ERKLEEKRAKA+EK +NEVAKA RKA
Sbjct: 232 EVAKVNNRFKREEVVINGWEGDQVEKANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKA 291

Query: 259 EERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           EE+RASAEAKRGTKVA+++E++N MRAVGR P+KRSFF
Sbjct: 292 EEKRASAEAKRGTKVARVLELANFMRAVGRAPSKRSFF 316

[Close]

BLAST of Carg03516 vs. ExPASy Swiss-Prot
Match: P93758 (Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-55
Identity = 144/270 (53.33%), Postives = 180/270 (66.67%), Query Frame = 0


Query: 23  IRDIHALTSPQP-----------PPVTANRNRRGEAWETTSQRSTSMVSEGGYSENFTSM 82
           +R++HALT P P           PP  A R         +  RS + +SEG   ENFT++
Sbjct: 26  VREVHALT-PAPEDNSRTMTATLPPPPAFRG------YFSPPRSATTMSEG---ENFTTI 85

Query: 83  SREFNALVIAGAEIGDDYRHDRPI----NEAPNNLSRIREEEYTPEEEMNPLAIVPDGHP 142
           SREFNALVIAG+ + ++    R +    +E  + L RI E+    EEE NPLAIVPD +P
Sbjct: 86  SREFNALVIAGSSMENNELMTRDVTQREDERQDELMRIHEDT-DHEEETNPLAIVPDQYP 145

Query: 143 FDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNR 202
               L P           G   G G +     ++  VK+EEVE KI+AWQ AK+AKINNR
Sbjct: 146 -GSGLDP-----------GSDNGPGQSRVGS-TVQRVKREEVEAKITAWQTAKLAKINNR 205

Query: 203 FKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAE 262
           FKREDAVI+GW  EQV KA+SWMKKIERKLEE++AKA+EK +N VAKA RKAEERRA+AE
Sbjct: 206 FKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKAQRKAEERRATAE 265

Query: 263 AKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           AKRGT+VAK++E++NLMRA+GRPPAKRSFF
Sbjct: 266 AKRGTEVAKVVEVANLMRALGRPPAKRSFF 271

[Close]

BLAST of Carg03516 vs. ExPASy Swiss-Prot
Match: Q93YN8 (Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54
Identity = 137/270 (50.74%), Postives = 175/270 (64.81%), Query Frame = 0


Query: 23  IRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVSEGGYS--ENFTSMSREFNALVI 82
           +RDIHA+T+           +RG      S   +   S+G  S  ENFT++SREFNALVI
Sbjct: 35  VRDIHAMTTTTE---LTRPQQRGSGGGYLSPSRSIAFSDGTTSSGENFTTVSREFNALVI 94

Query: 83  AGAEIGDDYR-------HDRPINEAPNNLSRIREEE------YTPEEEMNPLAIVPDGHP 142
           AG+ + ++         H   I +  N L+RI E +        PEE+ NP AIVPD + 
Sbjct: 95  AGSSMDNNSNGTNQSGGHRDVIRDERNELTRIGENDDVGDHGQVPEEDSNPWAIVPDDYN 154

Query: 143 FDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNR 202
             D         + N      GG     T   S+  VK+EEVE KI+AWQ AK+AKINNR
Sbjct: 155 NRD-------GSENNIVLASSGGQNRMVT-TASVQRVKREEVEAKITAWQTAKVAKINNR 214

Query: 203 FKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAE 262
           FKR+DAVI+GW  EQV +A+SWMKKIERKLE++RAKA+EK +N+VAKA RKAEERRA+AE
Sbjct: 215 FKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKAQRKAEERRATAE 274

Query: 263 AKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
            KRGT+VA+++E++NLMRAVGRPPAKRSFF
Sbjct: 275 GKRGTEVARVLEVANLMRAVGRPPAKRSFF 293

[Close]

BLAST of Carg03516 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12
Identity = 52/186 (27.96%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 94  PINEAPNNLSRIREEEYTPEEEMNPLAIVPDGHPFDDH------LAPLAISRQENRRGGG 153
           P  E P        +    E+ + P  ++P   P ++       + P+     E  +  G
Sbjct: 18  PTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKEVEEEKKEG 77

Query: 154 GGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKAS 213
                 +  R+  L  V+ E+  + I AW+ A+  K+ N+ +++ + I  WE  +     
Sbjct: 78  ------SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVE 137

Query: 214 SWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAV 273
           + +KK+E +LE+K+A+ +E+M+N++A+ H++AEE+RA  EAKRG ++ K  E++   RA 
Sbjct: 138 AELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRAT 197

[Close]

BLAST of Carg03516 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.0e-12
Identity = 44/121 (36.36%), Postives = 75/121 (61.98%), Query Frame = 0


Query: 151 SGTAATREISLHMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWM 210
           S  +A R++ L  ++KE+  + I AW+ ++ +K  NR +++ + +  WE  +     + +
Sbjct: 63  SSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQL 122

Query: 211 KKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRP 270
           +KIE KLE+K+A+  EKM+N+VA  H+ AEE+RA  EAK+G ++ K  E+    RA G  
Sbjct: 123 RKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVV 182

Query: 271 P 272
           P
Sbjct: 183 P 183

[Close]

BLAST of Carg03516 vs. ExPASy TrEMBL
Match: A0A6J1F6M7 (remorin 4.1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441356 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.3e-142
Identity = 270/277 (97.47%), Postives = 271/277 (97.83%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGG+DDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGNDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQE RR   GGGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQEYRR---GGGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240

Query: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 274

[Close]

BLAST of Carg03516 vs. ExPASy TrEMBL
Match: A0A6J1J837 (remorin 4.1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482213 PE=3 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.4e-142
Identity = 270/277 (97.47%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYR DRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRRDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQENRR    GGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQENRR----GGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAE 240

Query: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 ERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 273

[Close]

BLAST of Carg03516 vs. ExPASy TrEMBL
Match: A0A6J1F1J6 (remorin 4.1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441356 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138
Identity = 270/297 (90.91%), Postives = 271/297 (91.25%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGG+DDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGNDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQE RR   GGGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQEYRR---GGGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIE--------------------RKLEEK 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIE                    RKLEEK
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIEIHFETSHMNKLNLCRDHSIVRKLEEK 240

Query: 241 RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 294

[Close]

BLAST of Carg03516 vs. ExPASy TrEMBL
Match: A0A6J1J8D1 (remorin 4.1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482213 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 2.9e-138
Identity = 270/297 (90.91%), Postives = 270/297 (90.91%), Query Frame = 0


Query: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVS 60
           MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSM S
Sbjct: 1   MFNDQAPAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMAS 60

Query: 61  EGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEYTPEEEMNPLA 120
           EGG SENFTSMSREFNALVIAGAEIGDDYR DRPINEAPNNLSRIREEEYTPEEEMNPLA
Sbjct: 61  EGGSSENFTSMSREFNALVIAGAEIGDDYRRDRPINEAPNNLSRIREEEYTPEEEMNPLA 120

Query: 121 IVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAK 180
           IVPDGHPFDDHLAPLAISRQENRR    GGSGTAATREISLHMVKKEEVETKISAWQNAK
Sbjct: 121 IVPDGHPFDDHLAPLAISRQENRR----GGSGTAATREISLHMVKKEEVETKISAWQNAK 180

Query: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIE--------------------RKLEEK 240
           IAKINNRFKREDAVISGWEREQVQKASSWMKKIE                    RKLEEK
Sbjct: 181 IAKINNRFKREDAVISGWEREQVQKASSWMKKIEIHFETSHMNKLNLCRDHSIVRKLEEK 240

Query: 241 RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF
Sbjct: 241 RAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 293

[Close]

BLAST of Carg03516 vs. ExPASy TrEMBL
Match: A0A6J1I709 (remorin 4.1-like OS=Cucurbita maxima OX=3661 GN=LOC111470195 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 8.0e-120
Identity = 237/279 (84.95%), Postives = 250/279 (89.61%), Query Frame = 0


Query: 1   MFNDQA-PAVTSRASHGGDDDDQIRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMV 60
           MFNDQA PA TSR +HGGDD+DQIR+IHALT  +PPPVT NRNRRGEAWET SQRSTSM 
Sbjct: 1   MFNDQALPAGTSRPTHGGDDEDQIREIHALTPTRPPPVTENRNRRGEAWETASQRSTSMA 60

Query: 61  SEGGYSENFTSMSREFNALVIAGAEIGDDYRHDRPINEAPNNLSRIREEEY-TPEEEMNP 120
           SEG  SENFTS+SREFNALVIAGAEIGD YR DRPINEAPNNLSRI EE+  TPEEE NP
Sbjct: 61  SEGASSENFTSISREFNALVIAGAEIGDGYRQDRPINEAPNNLSRIGEEDQATPEEETNP 120

Query: 121 LAIVPDGHPFDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQN 180
           LAIVPDGHPFDD L P +I+RQEN  GG     G AATREISL MVKKEEVETKISAWQN
Sbjct: 121 LAIVPDGHPFDDQLTPSSITRQENSSGG-----GAAATREISLQMVKKEEVETKISAWQN 180

Query: 181 AKIAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRK 240
           AKIAKINNRFKREDAVISGWEREQVQKASSWMKK++R+LEE+RAKALEKMENEVAKA RK
Sbjct: 181 AKIAKINNRFKREDAVISGWEREQVQKASSWMKKVQRRLEERRAKALEKMENEVAKARRK 240

Query: 241 AEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           AEERRASAEAKRGTKVAK+IEISNLMRAVGRPPAKRSFF
Sbjct: 241 AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 274

[Close]

BLAST of Carg03516 vs. TAIR 10
Match: AT2G41870.1 (Remorin family protein )

HSP 1 Score: 218.0 bits (554), Expect = 9.5e-57
Identity = 144/270 (53.33%), Postives = 180/270 (66.67%), Query Frame = 0


Query: 23  IRDIHALTSPQP-----------PPVTANRNRRGEAWETTSQRSTSMVSEGGYSENFTSM 82
           +R++HALT P P           PP  A R         +  RS + +SEG   ENFT++
Sbjct: 26  VREVHALT-PAPEDNSRTMTATLPPPPAFRG------YFSPPRSATTMSEG---ENFTTI 85

Query: 83  SREFNALVIAGAEIGDDYRHDRPI----NEAPNNLSRIREEEYTPEEEMNPLAIVPDGHP 142
           SREFNALVIAG+ + ++    R +    +E  + L RI E+    EEE NPLAIVPD +P
Sbjct: 86  SREFNALVIAGSSMENNELMTRDVTQREDERQDELMRIHEDT-DHEEETNPLAIVPDQYP 145

Query: 143 FDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNR 202
               L P           G   G G +     ++  VK+EEVE KI+AWQ AK+AKINNR
Sbjct: 146 -GSGLDP-----------GSDNGPGQSRVGS-TVQRVKREEVEAKITAWQTAKLAKINNR 205

Query: 203 FKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAE 262
           FKREDAVI+GW  EQV KA+SWMKKIERKLEE++AKA+EK +N VAKA RKAEERRA+AE
Sbjct: 206 FKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKAQRKAEERRATAE 265

Query: 263 AKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
           AKRGT+VAK++E++NLMRA+GRPPAKRSFF
Sbjct: 266 AKRGTEVAKVVEVANLMRALGRPPAKRSFF 271

[Close]

BLAST of Carg03516 vs. TAIR 10
Match: AT3G57540.1 (Remorin family protein )

HSP 1 Score: 214.9 bits (546), Expect = 8.0e-56
Identity = 137/270 (50.74%), Postives = 175/270 (64.81%), Query Frame = 0


Query: 23  IRDIHALTSPQPPPVTANRNRRGEAWETTSQRSTSMVSEGGYS--ENFTSMSREFNALVI 82
           +RDIHA+T+           +RG      S   +   S+G  S  ENFT++SREFNALVI
Sbjct: 35  VRDIHAMTTTTE---LTRPQQRGSGGGYLSPSRSIAFSDGTTSSGENFTTVSREFNALVI 94

Query: 83  AGAEIGDDYR-------HDRPINEAPNNLSRIREEE------YTPEEEMNPLAIVPDGHP 142
           AG+ + ++         H   I +  N L+RI E +        PEE+ NP AIVPD + 
Sbjct: 95  AGSSMDNNSNGTNQSGGHRDVIRDERNELTRIGENDDVGDHGQVPEEDSNPWAIVPDDYN 154

Query: 143 FDDHLAPLAISRQENRRGGGGGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNR 202
             D         + N      GG     T   S+  VK+EEVE KI+AWQ AK+AKINNR
Sbjct: 155 NRD-------GSENNIVLASSGGQNRMVT-TASVQRVKREEVEAKITAWQTAKVAKINNR 214

Query: 203 FKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAE 262
           FKR+DAVI+GW  EQV +A+SWMKKIERKLE++RAKA+EK +N+VAKA RKAEERRA+AE
Sbjct: 215 FKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKAQRKAEERRATAE 274

Query: 263 AKRGTKVAKLIEISNLMRAVGRPPAKRSFF 278
            KRGT+VA+++E++NLMRAVGRPPAKRSFF
Sbjct: 275 GKRGTEVARVLEVANLMRAVGRPPAKRSFF 293

[Close]

BLAST of Carg03516 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14
Identity = 52/186 (27.96%), Postives = 98/186 (52.69%), Query Frame = 0


Query: 94  PINEAPNNLSRIREEEYTPEEEMNPLAIVPDGHPFDDH------LAPLAISRQENRRGGG 153
           P  E P        +    E+ + P  ++P   P ++       + P+    +E ++ G 
Sbjct: 18  PTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKVEEEKKEG- 77

Query: 154 GGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKAS 213
                 +  R+  L  V+ E+  + I AW+ A+  K+ N+ +++ + I  WE  +     
Sbjct: 78  ------SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVE 137

Query: 214 SWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAV 273
           + +KK+E +LE+K+A+ +E+M+N++A+ H++AEE+RA  EAKRG ++ K  E++   RA 
Sbjct: 138 AELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRAT 196

[Close]

BLAST of Carg03516 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 75.5 bits (184), Expect = 7.6e-14
Identity = 52/186 (27.96%), Postives = 96/186 (51.61%), Query Frame = 0


Query: 94  PINEAPNNLSRIREEEYTPEEEMNPLAIVPDGHPFDDH------LAPLAISRQENRRGGG 153
           P  E P        +    E+ + P  ++P   P ++       + P+     E  +  G
Sbjct: 18  PTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKEVEEEKKEG 77

Query: 154 GGGSGTAATREISLHMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKAS 213
                 +  R+  L  V+ E+  + I AW+ A+  K+ N+ +++ + I  WE  +     
Sbjct: 78  ------SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVE 137

Query: 214 SWMKKIERKLEEKRAKALEKMENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAV 273
           + +KK+E +LE+K+A+ +E+M+N++A+ H++AEE+RA  EAKRG ++ K  E++   RA 
Sbjct: 138 AELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRAT 197

[Close]

BLAST of Carg03516 vs. TAIR 10
Match: AT1G67590.1 (Remorin family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-13
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 169 VETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKM 228
           +E +  AW  A+ AK   R+KRE+  I  WE  + +KA   MKK+E K E  +A+A EK+
Sbjct: 229 MEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKL 288

Query: 229 ENEVAKAHRKAEERRASAEAKRGTKVAKLIEISNLMRAVGRPPAKRSF 277
            N++A   R AEERRA+AEAK   K  K  E ++ +R  G  P+  SF
Sbjct: 289 ANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLPSSFSF 336

The following BLAST results are available for this feature:

BLAST of Carg03516 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580855.1	3.8e-148	100.00	Remorin 4.2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017610.1 Remor...	[more]
XP_023522006.1	1.8e-142	97.83	remorin 4.1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526480.1 remorin...	[more]
XP_022934075.1	9.0e-142	97.47	remorin 4.1-like isoform X2 [Cucurbita moschata]	[more]
XP_022983669.1	1.5e-141	97.47	remorin 4.1-like isoform X2 [Cucurbita maxima]	[more]
XP_022934074.1	3.5e-138	90.91	remorin 4.1-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg03516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XII4	9.2e-57	51.80	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]
P93758	1.3e-55	53.33	Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1	[more]
Q93YN8	1.1e-54	50.74	Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1	[more]
Q9FFA5	1.1e-12	27.96	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
O80837	9.0e-12	36.36	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]

BLAST of Carg03516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6M7	4.3e-142	97.47	remorin 4.1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441356 PE=3 S...	[more]
A0A6J1J837	7.4e-142	97.47	remorin 4.1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482213 PE=3 SV=...	[more]
A0A6J1F1J6	1.7e-138	90.91	remorin 4.1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441356 PE=3 S...	[more]
A0A6J1J8D1	2.9e-138	90.91	remorin 4.1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482213 PE=3 SV=...	[more]
A0A6J1I709	8.0e-120	84.95	remorin 4.1-like OS=Cucurbita maxima OX=3661 GN=LOC111470195 PE=3 SV=1	[more]

BLAST of Carg03516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41870.1	9.5e-57	53.33	Remorin family protein	[more]
AT3G57540.1	8.0e-56	50.74	Remorin family protein	[more]
AT5G23750.2	2.0e-14	27.96	Remorin family protein	[more]
AT5G23750.1	7.6e-14	27.96	Remorin family protein	[more]
AT1G67590.1	4.9e-13	42.59	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 14..276
None	No IPR available	PANTHER	PTHR31471:SF69	SUBFAMILY NOT NAMED	coord: 14..276
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 168..272 e-value: 1.1E-28 score: 99.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03516-RA	Carg03516-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress