Homology
BLAST of Carg03094 vs. NCBI nr
Match:
KAG7024666.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 992.3 bits (2564), Expect = 1.5e-285
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query: 1 MTQSGYKNRVLIAQTETAAKPTSNEPPFPRISSIPPPRWAEEPLPLHRIRLPFFQIYGNL 60
MTQSGYKNRVLIAQTETAAKPTSNEPPFPRISSIPPPRWAEEPLPLHRIRLPFFQIYGNL
Sbjct: 1 MTQSGYKNRVLIAQTETAAKPTSNEPPFPRISSIPPPRWAEEPLPLHRIRLPFFQIYGNL 60
Query: 61 AVGPSSILNKLLSLGAILRHFLHRFPFSLPMVSPSQRLAQLSVLNSIFSSSSSSIPLRLP 120
AVGPSSILNKLLSLGAILRHFLHRFPFSLPMVSPSQRLAQLSVLNSIFSSSSSSIPLRLP
Sbjct: 61 AVGPSSILNKLLSLGAILRHFLHRFPFSLPMVSPSQRLAQLSVLNSIFSSSSSSIPLRLP 120
Query: 121 SSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPN 180
SSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPN
Sbjct: 121 SSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPN 180
Query: 181 KEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIET 240
KEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIET
Sbjct: 181 KEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIET 240
Query: 241 LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCE 300
LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCE
Sbjct: 241 LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCE 300
Query: 301 SGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTIT 360
SGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTIT
Sbjct: 301 SGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTIT 360
Query: 361 FNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMI 420
FNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMI
Sbjct: 361 FNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMI 420
Query: 421 LDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDY 480
LDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDY
Sbjct: 421 LDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDY 480
Query: 481 SEATGKVIEKLL 493
SEATGKVIEKLL
Sbjct: 481 SEATGKVIEKLL 492
BLAST of Carg03094 vs. NCBI nr
Match:
KAG6591788.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 990.7 bits (2560), Expect = 4.4e-285
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0
Query: 1 MTQSGYKNRVLIAQTETAAKPTSNEPPFPRISSIPPPRWAEEPLPLHRIRLPFFQIYGNL 60
MTQSGYKNRVLIAQTETAAKPTSNEPPFPRISSIPPPRWAEEPLPLHRIRLPFFQIYGNL
Sbjct: 1 MTQSGYKNRVLIAQTETAAKPTSNEPPFPRISSIPPPRWAEEPLPLHRIRLPFFQIYGNL 60
Query: 61 AVGPSSILNKLLSLGAILRHFLHRFPFSLPMVSPSQRLAQLSVLNSIFSSSSSSIPLRLP 120
AVGPSSILNKLLSLGAILRHFLHRFPFSLPMVSPSQRLAQLSVLNSIFSSSSSSIPLRLP
Sbjct: 61 AVGPSSILNKLLSLGAILRHFLHRFPFSLPMVSPSQRLAQLSVLNSIFSSSSSSIPLRLP 120
Query: 121 SSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPN 180
SSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPN
Sbjct: 121 SSSFSFSTSPKQSSALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPN 180
Query: 181 KEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIET 240
KEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIET
Sbjct: 181 KEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIET 240
Query: 241 LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCE 300
LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCE
Sbjct: 241 LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCE 300
Query: 301 SGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTIT 360
SGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTIT
Sbjct: 301 SGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTIT 360
Query: 361 FNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMI 420
FNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMI
Sbjct: 361 FNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMI 420
Query: 421 LDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDY 480
LDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDY
Sbjct: 421 LDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDY 480
Query: 481 SEATGKVIEKL 492
SEATGKVIEKL
Sbjct: 481 SEATGKVIEKL 491
BLAST of Carg03094 vs. NCBI nr
Match:
XP_022935997.1 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita moschata])
HSP 1 Score: 728.8 bits (1880), Expect = 3.1e-206
Identity = 352/353 (99.72%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 140 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 199
LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80
Query: 200 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 259
IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140
Query: 260 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 319
LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 200
Query: 320 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 379
RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 260
Query: 380 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 439
LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC
Sbjct: 261 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 320
Query: 440 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL+
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 373
BLAST of Carg03094 vs. NCBI nr
Match:
XP_022976791.1 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita maxima])
HSP 1 Score: 714.9 bits (1844), Expect = 4.7e-202
Identity = 343/352 (97.44%), Postives = 349/352 (99.15%), Query Frame = 0
Query: 140 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 199
LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80
Query: 200 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 259
IETVMLRIK+ERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81 IETVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140
Query: 260 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 319
LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGN NAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNFNAALKVFDEFPQQKC 200
Query: 320 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 379
RPNVRTFSTLMHALCDNGELERASELFS+MENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSKMENEGVCPDTITFNILISGLRKQKRIEEAIE 260
Query: 380 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 439
LL+RMKLKGCYPNAGTYQEVLYGLLDSGRLIEA+DCMRRMILD MDPSFVSYKKLLSGLC
Sbjct: 261 LLERMKLKGCYPNAGTYQEVLYGLLDSGRLIEAKDCMRRMILDGMDPSFVSYKKLLSGLC 320
Query: 440 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL 492
KKNLTEDVDWVLKQMVMQGF+PKMEMWKAILRC LAGNEDYS+ATGKVIEKL
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFIPKMEMWKAILRCTLAGNEDYSDATGKVIEKL 372
BLAST of Carg03094 vs. NCBI nr
Match:
XP_038897506.1 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Benincasa hispida])
HSP 1 Score: 711.4 bits (1835), Expect = 5.2e-201
Identity = 349/402 (86.82%), Postives = 375/402 (93.28%), Query Frame = 0
Query: 91 MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 150
M+ PS RL QLS+LNSIFSSSSSSIPL L SSS SFSTS +Q SA PHRLSHRDWLSPNE
Sbjct: 1 MILPSLRLTQLSLLNSIFSSSSSSIPLHLLSSSSSFSTSSRQPSAFPHRLSHRDWLSPNE 60
Query: 151 VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 210
VI IIQQI+ PP++LAF+HQWSNRKDYKPNKEIYTLVVSRLAEG LFDDIE VMLRIK+E
Sbjct: 61 VIIIIQQIKHPPSLLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120
Query: 211 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 270
RNFRLSD+FFYHVIKIYG+VAGRIGKAI+TLFDMPNYNCWPS+KTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDDFFYHVIKIYGHVAGRIGKAIDTLFDMPNYNCWPSLKTFNFVLNLLVSAKMFD 180
Query: 271 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 330
VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNL+AALKVFDEFPQQ+C PNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLDAALKVFDEFPQQRCTPNVRTFSTLL 240
Query: 331 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 390
HALC+NGELERASELFS+MENEGVCPDTITFNILISGLRKQKRIEEAIELL RMKLKGCY
Sbjct: 241 HALCENGELERASELFSKMENEGVCPDTITFNILISGLRKQKRIEEAIELLGRMKLKGCY 300
Query: 391 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 450
PNAGTYQEVLYGLLD+ + IEARDCM RMI M+PSFVSYKKLLSGLCKKNLTEDVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTEKFIEARDCMLRMISGGMEPSFVSYKKLLSGLCKKNLTEDVDWV 360
Query: 451 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
LKQMVMQGFVPKM MWK ILRCML+GNE+ ++ T KV EK++
Sbjct: 361 LKQMVMQGFVPKMGMWKVILRCMLSGNEECTDITDKVTEKVM 402
BLAST of Carg03094 vs. ExPASy Swiss-Prot
Match:
Q9LUD6 (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g14580 PE=2 SV=1)
HSP 1 Score: 441.8 bits (1135), Expect = 1.0e-122
Identity = 209/377 (55.44%), Postives = 283/377 (75.07%), Query Frame = 0
Query: 109 SSSSSSIPLRLPSSSFSFSTSPKQSSALPH--RLSHRDWLSPNEVIKIIQQIRDPPAVLA 168
S SSS + + SSS +++S ++ S RL H+DWL+PNEV+KI ++DP +L
Sbjct: 21 SLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLP 80
Query: 169 FIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKI 228
+S RKDY+P + +Y L++++ + ++D+IE VM IK E+ R S+EFFY++++I
Sbjct: 81 AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRI 140
Query: 229 YGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEI 288
YGN+AGRI +AIE LF MP++ CWPS K+FNF+LNLLVSAK+FD +H++++ APKLG+EI
Sbjct: 141 YGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200
Query: 289 DACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELF 348
DACCLNILIKGLCESGNL AAL++ DEFPQQK RPNV TFS L+ C+ G+ E A +L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 349 SRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDS 408
RME E + PDTITFNILISGLRK+ R+EE I+LL+RMK+KGC PN GTYQEVLYGLLD
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 409 GRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMW 468
R +EA++ M +MI M PSF+SYKK++ GLC+ ++DWVL+QMV GFVPK MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Query: 469 KAILRCMLAGNEDYSEA 484
+++C+++ N D S+A
Sbjct: 381 WKVVQCVVSKNNDDSQA 397
BLAST of Carg03094 vs. ExPASy Swiss-Prot
Match:
Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 8.7e-42
Identity = 100/350 (28.57%), Postives = 183/350 (52.29%), Query Frame = 0
Query: 146 LSPNEVIKIIQQIRDPPAVLAFIHQWSNR--KDYKPNKEIYTLVVSRLAEGCLFDDIETV 205
++P++VIK+++ +D +A + Y ++ + +V RL F E +
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 206 MLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLL 265
++R+K E N +S++ + + YG V R ++ M +++C PS K + VL +L
Sbjct: 74 IVRMKIE-NCVVSEDILLSICRGYGRV-HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 133
Query: 266 VSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCES-GNLNAALKVFDEFPQQKCRPN 325
V ++ + Y ++G+ LN+LIK LC + G ++A LK+F E P++ C P+
Sbjct: 134 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 193
Query: 326 VRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLD 385
T+ TL+ LC G ++ A +LF+ M + P +T+ LI+GL K ++EA+ L+
Sbjct: 194 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 253
Query: 386 RMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKN 445
MK KG PN TY ++ GL GR ++A + M+ P+ V+Y L++GLCK+
Sbjct: 254 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 313
Query: 446 LTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
++ +L +M +QG P ++ ++ A ++ + EA + E +L
Sbjct: 314 KIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK-FREAANFLDEMIL 360
BLAST of Carg03094 vs. ExPASy Swiss-Prot
Match:
Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)
HSP 1 Score: 157.5 bits (397), Expect = 3.8e-37
Identity = 94/358 (26.26%), Postives = 186/358 (51.96%), Query Frame = 0
Query: 121 SSSFSFSTSPKQSSALPHRLSHRDWL-SPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKP 180
SS F F +S + + P + + + SP V K+I DP S + +++
Sbjct: 23 SSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRH 82
Query: 181 NKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIE 240
++ + +++ +L G F+ I+ V+ + +S + L+ E F ++IK+Y A K +
Sbjct: 83 SRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAE-AKLPEKVLS 142
Query: 241 TLFDMPNYNCWPSVKTFNFVLNLLVSAKMF-DVVHEVYMGAPKLGIEIDACCLNILIKGL 300
T + M +N P K N +L++LVS + + E++ + G+ + N+L++
Sbjct: 143 TFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF 202
Query: 301 CESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDT 360
C + +L+ A ++F + ++ P+V ++ L+ C G++ A EL M N+G PD
Sbjct: 203 CLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR 262
Query: 361 ITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRR 420
+++ L++ L ++ ++ EA +LL RMKLKGC P+ Y ++ G R ++AR +
Sbjct: 263 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 322
Query: 421 MILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAG 477
M+ + P+ VSY+ L+ GLC + + ++ L++M+ +GF P ++ C++ G
Sbjct: 323 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF----SVSNCLVKG 374
BLAST of Carg03094 vs. ExPASy Swiss-Prot
Match:
Q9LQQ1 (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1)
HSP 1 Score: 156.8 bits (395), Expect = 6.5e-37
Identity = 97/344 (28.20%), Postives = 177/344 (51.45%), Query Frame = 0
Query: 131 KQSSALP-HRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSN---RKDYKPNKEIYTL 190
K SS P H+ + + W + +++I DP L+ HQ+ R DY Y+
Sbjct: 32 KASSHEPTHKFTRKPW-EEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPS----YSS 91
Query: 191 VVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPN 250
++ +LA+ FD ++ + LR+ RN R + F +I+ YG AG + KAI+ + +
Sbjct: 92 LIYKLAKSRNFDAVDQI-LRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITS 151
Query: 251 YNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNA 310
++C ++++ N ++N+LV + + GA + + ++ NILIKG + + A
Sbjct: 152 FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA 211
Query: 311 ALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILIS 370
A KVFDE + + +P+V T+++L+ LC N ++ +A L M + + P+ +TF +L+
Sbjct: 212 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 271
Query: 371 GLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDP 430
GL + EA +L+ M+ +GC P Y ++ L GR+ EA+ + M R+ P
Sbjct: 272 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 331
Query: 431 SFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAIL 471
V Y L++ LC + + VL +M M+G P ++ ++
Sbjct: 332 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
BLAST of Carg03094 vs. ExPASy Swiss-Prot
Match:
O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)
HSP 1 Score: 155.2 bits (391), Expect = 1.9e-36
Identity = 101/366 (27.60%), Postives = 178/366 (48.63%), Query Frame = 0
Query: 115 IPLRLPSSSFSFSTSPKQSS-----ALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIH 174
IP+R+ S+ S SS ++ R S +SPN +++++ + P
Sbjct: 6 IPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFK 65
Query: 175 QWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGN 234
+K + ++ A FD +E ++ RI+ E N + + F V + YG
Sbjct: 66 SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-NRVIIERSFIVVFRAYGK 125
Query: 235 VAGRIGKAIETLFDM-PNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVY----MGAPKLGI 294
A KA++ M + C SVK+FN VLN++++ ++ E Y + I
Sbjct: 126 -AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 185
Query: 295 EIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASE 354
+ N++IK LC+ ++ A++VF P++KC P+ T+ TLM LC ++ A
Sbjct: 186 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 245
Query: 355 LFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLL 414
L M++EG P + +N+LI GL K+ + +L+D M LKGC PN TY +++GL
Sbjct: 246 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 305
Query: 415 DSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKME 471
G+L +A + RM+ + P+ V+Y L++GL K+ D +L M +G+
Sbjct: 306 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 365
BLAST of Carg03094 vs. ExPASy TrEMBL
Match:
A0A6J1F762 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111442728 PE=4 SV=1)
HSP 1 Score: 728.8 bits (1880), Expect = 1.5e-206
Identity = 352/353 (99.72%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 140 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 199
LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80
Query: 200 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 259
IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140
Query: 260 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 319
LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 200
Query: 320 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 379
RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 260
Query: 380 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 439
LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC
Sbjct: 261 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 320
Query: 440 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL+
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLI 373
BLAST of Carg03094 vs. ExPASy TrEMBL
Match:
A0A6J1IHV8 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477066 PE=4 SV=1)
HSP 1 Score: 714.9 bits (1844), Expect = 2.3e-202
Identity = 343/352 (97.44%), Postives = 349/352 (99.15%), Query Frame = 0
Query: 140 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 199
LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD
Sbjct: 21 LSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDD 80
Query: 200 IETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 259
IETVMLRIK+ERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV
Sbjct: 81 IETVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFV 140
Query: 260 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKC 319
LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGN NAALKVFDEFPQQKC
Sbjct: 141 LNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNFNAALKVFDEFPQQKC 200
Query: 320 RPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIE 379
RPNVRTFSTLMHALCDNGELERASELFS+MENEGVCPDTITFNILISGLRKQKRIEEAIE
Sbjct: 201 RPNVRTFSTLMHALCDNGELERASELFSKMENEGVCPDTITFNILISGLRKQKRIEEAIE 260
Query: 380 LLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLC 439
LL+RMKLKGCYPNAGTYQEVLYGLLDSGRLIEA+DCMRRMILD MDPSFVSYKKLLSGLC
Sbjct: 261 LLERMKLKGCYPNAGTYQEVLYGLLDSGRLIEAKDCMRRMILDGMDPSFVSYKKLLSGLC 320
Query: 440 KKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKL 492
KKNLTEDVDWVLKQMVMQGF+PKMEMWKAILRC LAGNEDYS+ATGKVIEKL
Sbjct: 321 KKNLTEDVDWVLKQMVMQGFIPKMEMWKAILRCTLAGNEDYSDATGKVIEKL 372
BLAST of Carg03094 vs. ExPASy TrEMBL
Match:
A0A0A0KZE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621180 PE=4 SV=1)
HSP 1 Score: 698.4 bits (1801), Expect = 2.2e-197
Identity = 340/402 (84.58%), Postives = 367/402 (91.29%), Query Frame = 0
Query: 91 MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 150
M+ S RL+QL +LNSIFSSSS SIPL LPSSS SFSTSPKQ S PH+LSHRDWLSPNE
Sbjct: 1 MIRSSLRLSQLFLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFPHKLSHRDWLSPNE 60
Query: 151 VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 210
VI IIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTLVVSRLAEG LFDDIE VMLRIK+E
Sbjct: 61 VINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIKAE 120
Query: 211 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 270
RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
Query: 271 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 330
VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AALKV DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLL 240
Query: 331 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 390
H LC+NGEL RA ELF +MENEGVCPDTITFNILISGLRK+KRIEEAIELL RMKLKGCY
Sbjct: 241 HGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCY 300
Query: 391 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 450
PNAGTYQEVLYGLLD+G+ IEARDCM RMI + MDPSFVSYKKLLSGLCKK LTEDVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISEGMDPSFVSYKKLLSGLCKKKLTEDVDWV 360
Query: 451 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
LKQMVMQGFVPK+ MWK ILRCML+GNE+ + T +V EK +
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCMLSGNEECIDITDEVFEKFV 402
BLAST of Carg03094 vs. ExPASy TrEMBL
Match:
A0A5D3DWG4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001860 PE=4 SV=1)
HSP 1 Score: 689.9 bits (1779), Expect = 7.8e-195
Identity = 336/402 (83.58%), Postives = 367/402 (91.29%), Query Frame = 0
Query: 91 MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 150
M+ S RL+QLS+LNSIFSSSS SIPL LPSSS SFSTSPKQ S H+LSHRDWLSPNE
Sbjct: 1 MIRSSLRLSQLSLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFSHKLSHRDWLSPNE 60
Query: 151 VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 210
VIKIIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTL+VSRLAEG LFDDIE VMLRIK+E
Sbjct: 61 VIKIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLIVSRLAEGRLFDDIEKVMLRIKAE 120
Query: 211 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 270
RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLSKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
Query: 271 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 330
VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AA K+ DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAAFKLLDEFPQQRCRPNVRTFSTLL 240
Query: 331 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 390
H LC+NGELERA ELF +MENEGV PDTITFNILISGLRK+KRIEEAIELL RM+LKGC
Sbjct: 241 HGLCENGELERALELFCKMENEGVWPDTITFNILISGLRKKKRIEEAIELLRRMELKGCD 300
Query: 391 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 450
PNAGTYQEVLYGLLD+G+ IEARDCM RMI D MDPSFVSYKKLLSGLCKKNLT+DVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISDGMDPSFVSYKKLLSGLCKKNLTQDVDWV 360
Query: 451 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
LKQMVMQGFVPK+ MWK ILRC+L+GNE+ + T V EK++
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCVLSGNEECIDITDDVFEKVV 402
BLAST of Carg03094 vs. ExPASy TrEMBL
Match:
A0A1S3CJT2 (pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103501764 PE=4 SV=1)
HSP 1 Score: 689.9 bits (1779), Expect = 7.8e-195
Identity = 336/402 (83.58%), Postives = 367/402 (91.29%), Query Frame = 0
Query: 91 MVSPSQRLAQLSVLNSIFSSSSSSIPLRLPSSSFSFSTSPKQSSALPHRLSHRDWLSPNE 150
M+ S RL+QLS+LNSIFSSSS SIPL LPSSS SFSTSPKQ S H+LSHRDWLSPNE
Sbjct: 1 MIRSSLRLSQLSLLNSIFSSSSPSIPLHLPSSSSSFSTSPKQPSVFSHKLSHRDWLSPNE 60
Query: 151 VIKIIQQIRDPPAVLAFIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSE 210
VIKIIQQI+ P +VLAF+HQWSNRKDYKPNKEIYTL+VSRLAEG LFDDIE VMLRIK+E
Sbjct: 61 VIKIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLIVSRLAEGRLFDDIEKVMLRIKAE 120
Query: 211 RNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 270
RNFRLSDEFFYHVIKIYGNVAGR+ KAI+TLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD
Sbjct: 121 RNFRLSDEFFYHVIKIYGNVAGRLSKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKMFD 180
Query: 271 VVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLM 330
VVHEVYMGAPKLGIEIDACCLNIL+KGLC+SGNL+AA K+ DEFPQQ+CRPNVRTFSTL+
Sbjct: 181 VVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAAFKLLDEFPQQRCRPNVRTFSTLL 240
Query: 331 HALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCY 390
H LC+NGELERA ELF +MENEGV PDTITFNILISGLRK+KRIEEAIELL RM+LKGC
Sbjct: 241 HGLCENGELERALELFCKMENEGVWPDTITFNILISGLRKKKRIEEAIELLRRMELKGCD 300
Query: 391 PNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWV 450
PNAGTYQEVLYGLLD+G+ IEARDCM RMI D MDPSFVSYKKLLSGLCKKNLT+DVDWV
Sbjct: 301 PNAGTYQEVLYGLLDTGKFIEARDCMHRMISDGMDPSFVSYKKLLSGLCKKNLTQDVDWV 360
Query: 451 LKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
LKQMVMQGFVPK+ MWK ILRC+L+GNE+ + T V EK++
Sbjct: 361 LKQMVMQGFVPKVGMWKVILRCVLSGNEECIDITDDVFEKVV 402
BLAST of Carg03094 vs. TAIR 10
Match:
AT3G14580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 441.8 bits (1135), Expect = 7.2e-124
Identity = 209/377 (55.44%), Postives = 283/377 (75.07%), Query Frame = 0
Query: 109 SSSSSSIPLRLPSSSFSFSTSPKQSSALPH--RLSHRDWLSPNEVIKIIQQIRDPPAVLA 168
S SSS + + SSS +++S ++ S RL H+DWL+PNEV+KI ++DP +L
Sbjct: 21 SLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLP 80
Query: 169 FIHQWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKI 228
+S RKDY+P + +Y L++++ + ++D+IE VM IK E+ R S+EFFY++++I
Sbjct: 81 AYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRI 140
Query: 229 YGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEI 288
YGN+AGRI +AIE LF MP++ CWPS K+FNF+LNLLVSAK+FD +H++++ APKLG+EI
Sbjct: 141 YGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI 200
Query: 289 DACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELF 348
DACCLNILIKGLCESGNL AAL++ DEFPQQK RPNV TFS L+ C+ G+ E A +L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 349 SRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDS 408
RME E + PDTITFNILISGLRK+ R+EE I+LL+RMK+KGC PN GTYQEVLYGLLD
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 409 GRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMW 468
R +EA++ M +MI M PSF+SYKK++ GLC+ ++DWVL+QMV GFVPK MW
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Query: 469 KAILRCMLAGNEDYSEA 484
+++C+++ N D S+A
Sbjct: 381 WKVVQCVVSKNNDDSQA 397
BLAST of Carg03094 vs. TAIR 10
Match:
AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 172.9 bits (437), Expect = 6.2e-43
Identity = 100/350 (28.57%), Postives = 183/350 (52.29%), Query Frame = 0
Query: 146 LSPNEVIKIIQQIRDPPAVLAFIHQWSNR--KDYKPNKEIYTLVVSRLAEGCLFDDIETV 205
++P++VIK+++ +D +A + Y ++ + +V RL F E +
Sbjct: 14 ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDL 73
Query: 206 MLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPNYNCWPSVKTFNFVLNLL 265
++R+K E N +S++ + + YG V R ++ M +++C PS K + VL +L
Sbjct: 74 IVRMKIE-NCVVSEDILLSICRGYGRV-HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAIL 133
Query: 266 VSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCES-GNLNAALKVFDEFPQQKCRPN 325
V ++ + Y ++G+ LN+LIK LC + G ++A LK+F E P++ C P+
Sbjct: 134 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPD 193
Query: 326 VRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLD 385
T+ TL+ LC G ++ A +LF+ M + P +T+ LI+GL K ++EA+ L+
Sbjct: 194 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 253
Query: 386 RMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKN 445
MK KG PN TY ++ GL GR ++A + M+ P+ V+Y L++GLCK+
Sbjct: 254 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ 313
Query: 446 LTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAGNEDYSEATGKVIEKLL 493
++ +L +M +QG P ++ ++ A ++ + EA + E +L
Sbjct: 314 KIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK-FREAANFLDEMIL 360
BLAST of Carg03094 vs. TAIR 10
Match:
AT4G01400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 40053 Blast hits to 12380 proteins in 263 species: Archae - 4; Bacteria - 27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses - 0; Other Eukaryotes - 935 (source: NCBI BLink). )
HSP 1 Score: 157.5 bits (397), Expect = 2.7e-38
Identity = 94/358 (26.26%), Postives = 186/358 (51.96%), Query Frame = 0
Query: 121 SSSFSFSTSPKQSSALPHRLSHRDWL-SPNEVIKIIQQIRDPPAVLAFIHQWSNRKDYKP 180
SS F F +S + + P + + + SP V K+I DP S + +++
Sbjct: 23 SSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRH 82
Query: 181 NKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIE 240
++ + +++ +L G F+ I+ V+ + +S + L+ E F ++IK+Y A K +
Sbjct: 83 SRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTGEIFTYLIKVYAE-AKLPEKVLS 142
Query: 241 TLFDMPNYNCWPSVKTFNFVLNLLVSAKMF-DVVHEVYMGAPKLGIEIDACCLNILIKGL 300
T + M +N P K N +L++LVS + + E++ + G+ + N+L++
Sbjct: 143 TFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAF 202
Query: 301 CESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDT 360
C + +L+ A ++F + ++ P+V ++ L+ C G++ A EL M N+G PD
Sbjct: 203 CLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR 262
Query: 361 ITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRR 420
+++ L++ L ++ ++ EA +LL RMKLKGC P+ Y ++ G R ++AR +
Sbjct: 263 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 322
Query: 421 MILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAILRCMLAG 477
M+ + P+ VSY+ L+ GLC + + ++ L++M+ +GF P ++ C++ G
Sbjct: 323 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF----SVSNCLVKG 374
BLAST of Carg03094 vs. TAIR 10
Match:
AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 156.8 bits (395), Expect = 4.6e-38
Identity = 97/344 (28.20%), Postives = 177/344 (51.45%), Query Frame = 0
Query: 131 KQSSALP-HRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIHQWSN---RKDYKPNKEIYTL 190
K SS P H+ + + W + +++I DP L+ HQ+ R DY Y+
Sbjct: 32 KASSHEPTHKFTRKPW-EEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHDYPS----YSS 91
Query: 191 VVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGNVAGRIGKAIETLFDMPN 250
++ +LA+ FD ++ + LR+ RN R + F +I+ YG AG + KAI+ + +
Sbjct: 92 LIYKLAKSRNFDAVDQI-LRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITS 151
Query: 251 YNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDACCLNILIKGLCESGNLNA 310
++C ++++ N ++N+LV + + GA + + ++ NILIKG + + A
Sbjct: 152 FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEA 211
Query: 311 ALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASELFSRMENEGVCPDTITFNILIS 370
A KVFDE + + +P+V T+++L+ LC N ++ +A L M + + P+ +TF +L+
Sbjct: 212 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 271
Query: 371 GLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLLDSGRLIEARDCMRRMILDRMDP 430
GL + EA +L+ M+ +GC P Y ++ L GR+ EA+ + M R+ P
Sbjct: 272 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 331
Query: 431 SFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKMEMWKAIL 471
V Y L++ LC + + VL +M M+G P ++ ++
Sbjct: 332 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
BLAST of Carg03094 vs. TAIR 10
Match:
AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 155.2 bits (391), Expect = 1.3e-37
Identity = 101/366 (27.60%), Postives = 178/366 (48.63%), Query Frame = 0
Query: 115 IPLRLPSSSFSFSTSPKQSS-----ALPHRLSHRDWLSPNEVIKIIQQIRDPPAVLAFIH 174
IP+R+ S+ S SS ++ R S +SPN +++++ + P
Sbjct: 6 IPIRISFFSYFLKESRILSSNPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFK 65
Query: 175 QWSNRKDYKPNKEIYTLVVSRLAEGCLFDDIETVMLRIKSERNFRLSDEFFYHVIKIYGN 234
+K + ++ A FD +E ++ RI+ E N + + F V + YG
Sbjct: 66 SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLE-NRVIIERSFIVVFRAYGK 125
Query: 235 VAGRIGKAIETLFDM-PNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVY----MGAPKLGI 294
A KA++ M + C SVK+FN VLN++++ ++ E Y + I
Sbjct: 126 -AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 185
Query: 295 EIDACCLNILIKGLCESGNLNAALKVFDEFPQQKCRPNVRTFSTLMHALCDNGELERASE 354
+ N++IK LC+ ++ A++VF P++KC P+ T+ TLM LC ++ A
Sbjct: 186 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 245
Query: 355 LFSRMENEGVCPDTITFNILISGLRKQKRIEEAIELLDRMKLKGCYPNAGTYQEVLYGLL 414
L M++EG P + +N+LI GL K+ + +L+D M LKGC PN TY +++GL
Sbjct: 246 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 305
Query: 415 DSGRLIEARDCMRRMILDRMDPSFVSYKKLLSGLCKKNLTEDVDWVLKQMVMQGFVPKME 471
G+L +A + RM+ + P+ V+Y L++GL K+ D +L M +G+
Sbjct: 306 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 365
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7024666.1 | 1.5e-285 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6591788.1 | 4.4e-285 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022935997.1 | 3.1e-206 | 99.72 | pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita ... | [more] |
XP_022976791.1 | 4.7e-202 | 97.44 | pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Cucurbita ... | [more] |
XP_038897506.1 | 5.2e-201 | 86.82 | pentatricopeptide repeat-containing protein At3g14580, mitochondrial [Benincasa ... | [more] |
Match Name | E-value | Identity | Description | |
Q9LUD6 | 1.0e-122 | 55.44 | Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidop... | [more] |
Q9FNL2 | 8.7e-42 | 28.57 | Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... | [more] |
Q8LDU5 | 3.8e-37 | 26.26 | Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... | [more] |
Q9LQQ1 | 6.5e-37 | 28.20 | Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... | [more] |
O49436 | 1.9e-36 | 27.60 | Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F762 | 1.5e-206 | 99.72 | pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbit... | [more] |
A0A6J1IHV8 | 2.3e-202 | 97.44 | pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucurbit... | [more] |
A0A0A0KZE4 | 2.2e-197 | 84.58 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621180 PE=4 SV=1 | [more] |
A0A5D3DWG4 | 7.8e-195 | 83.58 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CJT2 | 7.8e-195 | 83.58 | pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G14580.1 | 7.2e-124 | 55.44 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G46100.1 | 6.2e-43 | 28.57 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G01400.3 | 2.7e-38 | 26.26 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT1G07740.1 | 4.6e-38 | 28.20 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G20090.1 | 1.3e-37 | 27.60 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |