Carg03064 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03064
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr09: 3294549 .. 3294851 (-)
RNA-Seq ExpressionCarg03064
SyntenyCarg03064
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACTTCAAAGCTCTGTGGAGCCACTATTTGAGGGCCACAATATATCAAATATTCTTCCGATTCTCAATTTGGTCTCCATTATATATATATGGAAGTCTAAAACAATATTATGCGAGCTTATACTTAAAATAGACAATATCGTATTATTGTGGGATTCATGATTCCTAATAATATATATGTACACTTCTTGCTCTTTTATGTTTGTGTTTAGATAATTATATTGTTAAATGAACACGACTCTATACTCTACACATACTCTACAGAGTGGTATGATATTGTCCACTTTGAACATAAACTTT

mRNA sequence

ATGGTACTTCAAAGCTCTGTGGAGCCACTATTTGAGGGCCACAATATATCAAATATTCTTCCGATTCTCAATTTGGTCTCCATTATATATATATGGAAGTCTAAAACAATATTATGCGAGCTTATACTTAAAATAGACAATATCGTATTATTGTGGGATTCATGATTCCTAATAATATATATGTACACTTCTTGCTCTTTTATGTTTGTGTTTAGATAATTATATTGTTAAATGAACACGACTCTATACTCTACACATACTCTACAGAGTGGTATGATATTGTCCACTTTGAACATAAACTTT

Coding sequence (CDS)

ATGGTACTTCAAAGCTCTGTGGAGCCACTATTTGAGGGCCACAATATATCAAATATTCTTCCGATTCTCAATTTGGTCTCCATTATATATATATGGAAGTCTAAAACAATATTATGCGAGCTTATACTTAAAATAGACAATATCGTATTATTGTGGGATTCATGA

Protein sequence

MVLQSSVEPLFEGHNISNILPILNLVSIIYIWKSKTILCELILKIDNIVLLWDS
Homology
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BLAST of Carg03064 vs. NCBI nr
Match: KAG7024636.1 (hypothetical protein SDJN02_13454, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MVLQSSVEPLFEGHNISNILPILNLVSIIYIWKSKTILCELILKIDNIVLLWDS 55
          MVLQSSVEPLFEGHNISNILPILNLVSIIYIWKSKTILCELILKIDNIVLLWDS
Sbjct: 1  MVLQSSVEPLFEGHNISNILPILNLVSIIYIWKSKTILCELILKIDNIVLLWDS 54

The following BLAST results are available for this feature:
BLAST of Carg03064 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024636.11.1e-19100.00hypothetical protein SDJN02_13454, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg03064 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg03064 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg03064 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03064-RACarg03064-RAmRNA