Carg02983 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02983
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHomeobox-leucine zipper protein family
LocationCarg_Chr09: 2800682 .. 2801072 (-)
RNA-Seq ExpressionCarg02983
SyntenyCarg02983
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTGGAATCTCACAGGTTCATTTGTAGGATCTGTGTGTAGGCTTCTGATATCCCTTTGATGGCACCAGAAAACATAGGTGCCATTTCTTCTCTTGTATGCAATTTTTGCTGTCTGTTTCTTTAAAAGACTGAAGGGATTGGAGAAACATTTTGAAGTTGAAAACAAGCTCGAACCAGAGAGAAAAATGAAGATCGCAGCTGAATTAGAGCTGGAGCCAAAACAAGTGACAATTTGGTTTCAGAATCGCAGAGCCCGTTGGAAAGCAAAGAAATTAGAGAGAGATTATGGAGCTCTTAAAGTGGATTACGATGCTCTTAAGCTGGATTATGATGTTCTTGAGAAAGAGAATGCTTCTCTTGCTGCAAATGTATCGAAAATCTGTTAA

mRNA sequence

ATGAATGTGGAATCTCACAGACTGAAGGGATTGGAGAAACATTTTGAAGTTGAAAACAAGCTCGAACCAGAGAGAAAAATGAAGATCGCAGCTGAATTAGAGCTGGAGCCAAAACAAGTGACAATTTGGTTTCAGAATCGCAGAGCCCGTTGGAAAGCAAAGAAATTAGAGAGAGATTATGGAGCTCTTAAAGTGGATTACGATGCTCTTAAGCTGGATTATGATGTTCTTGAGAAAGAGAATGCTTCTCTTGCTGCAAATGTATCGAAAATCTGTTAA

Coding sequence (CDS)

ATGAATGTGGAATCTCACAGACTGAAGGGATTGGAGAAACATTTTGAAGTTGAAAACAAGCTCGAACCAGAGAGAAAAATGAAGATCGCAGCTGAATTAGAGCTGGAGCCAAAACAAGTGACAATTTGGTTTCAGAATCGCAGAGCCCGTTGGAAAGCAAAGAAATTAGAGAGAGATTATGGAGCTCTTAAAGTGGATTACGATGCTCTTAAGCTGGATTATGATGTTCTTGAGAAAGAGAATGCTTCTCTTGCTGCAAATGTATCGAAAATCTGTTAA

Protein sequence

MNVESHRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVDYDALKLDYDVLEKENASLAANVSKIC
Homology
[Close]
BLAST of Carg02983 vs. NCBI nr
Match: KAG7024557.1 (Homeobox-leucine zipper protein ATHB-6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183.3 bits (464), Expect = 9.2e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MNVESHRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDY 60
          MNVESHRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDY
Sbjct: 1  MNVESHRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDY 60

Query: 61 GALKVDYDALKLDYDVLEKENASLAANVSKIC 93
          GALKVDYDALKLDYDVLEKENASLAANVSKIC
Sbjct: 61 GALKVDYDALKLDYDVLEKENASLAANVSKIC 92

[Close]
BLAST of Carg02983 vs. NCBI nr
Match: KAA0038691.1 (homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.1e-31
Identity = 69/85 (81.18%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++KGLE+HFEVENKLEP+RKMKIAAELELEP+QVTIWFQNRRARWK K+LE+DYG LK++
Sbjct: 70  QVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVKEL 154

[Close]
BLAST of Carg02983 vs. NCBI nr
Match: XP_008466655.1 (PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302.1 homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.1e-31
Identity = 69/85 (81.18%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++KGLE+HFEVENKLEP+RKMKIAAELELEP+QVTIWFQNRRARWK K+LE+DYG LK++
Sbjct: 70  QVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVKEL 154

[Close]
BLAST of Carg02983 vs. NCBI nr
Match: XP_022982007.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima])

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LE+HFEVENKLEPERKMKIA ELELEP+QVTIWFQNRRARWK K+LERDYG LK +
Sbjct: 70  QVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKAN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVREL 154

[Close]
BLAST of Carg02983 vs. NCBI nr
Match: XP_022940501.1 (homeobox-leucine zipper protein ATHB-5-like [Cucurbita moschata])

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LE+HFEVENKLEPERKMKIA ELELEP+QVTIWFQNRRARWK K+LERDYG LK +
Sbjct: 70  QVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKAN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVREL 154

[Close]
BLAST of Carg02983 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24
Identity = 51/86 (59.30%), Postives = 71/86 (82.56%), Query Frame = 0 

Query: 6   HRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKV 65
           +++K LEK+FE+ENKLEPERK+K+A EL L+P+QV +WFQNRRARWK K+LE+DYG LK 
Sbjct: 69  NQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKT 128

Query: 66  DYDALKLDYDVLEKENASLAANVSKI 92
            YD+L+ ++D L ++N SL   +SK+
Sbjct: 129 QYDSLRHNFDSLRRDNESLLQEISKL 154

[Close]
BLAST of Carg02983 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 3.4e-24
Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LEK+FE+ENKLEPERK K+A EL L+P+QV +WFQNRRARWK K+LE+DYG LK  
Sbjct: 67  QVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQ 126

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YD+L+ ++D L ++N SL   +SKI
Sbjct: 127 YDSLRHNFDSLRRDNDSLLQEISKI 151

[Close]
BLAST of Carg02983 vs. ExPASy Swiss-Prot
Match: P46667 (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-24
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LEK+FE++NKLEPERK+K+A EL L+P+QV IWFQNRRARWK K+LERDYG LK +
Sbjct: 80  QVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSN 139

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           +DALK + D L+++N SL   + ++
Sbjct: 140 FDALKRNRDSLQRDNDSLLGQIKEL 164

[Close]
BLAST of Carg02983 vs. ExPASy Swiss-Prot
Match: Q9XH37 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-22
Identity = 47/85 (55.29%), Postives = 68/85 (80.00%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           +++ LE+ FEVENKLEPERK ++A +L L+P+QV +WFQNRRARWK K+LERDY AL+  
Sbjct: 59  QVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHS 118

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YD+L+LD+D L ++  +L A + ++
Sbjct: 119 YDSLRLDHDALRRDKDALLAEIKEL 143

[Close]
BLAST of Carg02983 vs. ExPASy Swiss-Prot
Match: Q6K498 (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX4 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-22
Identity = 47/85 (55.29%), Postives = 68/85 (80.00%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           +++ LE+ FEVENKLEPERK ++A +L L+P+QV +WFQNRRARWK K+LERDY AL+  
Sbjct: 59  QVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHS 118

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YD+L+LD+D L ++  +L A + ++
Sbjct: 119 YDSLRLDHDALRRDKDALLAEIKEL 143

[Close]
BLAST of Carg02983 vs. ExPASy TrEMBL
Match: A0A5A7TAR1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G002330 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 69/85 (81.18%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++KGLE+HFEVENKLEP+RKMKIAAELELEP+QVTIWFQNRRARWK K+LE+DYG LK++
Sbjct: 70  QVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVKEL 154

[Close]
BLAST of Carg02983 vs. ExPASy TrEMBL
Match: A0A5D3E5X1 (Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006000 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 69/85 (81.18%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++KGLE+HFEVENKLEP+RKMKIAAELELEP+QVTIWFQNRRARWK K+LE+DYG LK++
Sbjct: 70  QVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVKEL 154

[Close]
BLAST of Carg02983 vs. ExPASy TrEMBL
Match: A0A1S3CRT3 (homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504010 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.0e-31
Identity = 69/85 (81.18%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++KGLE+HFEVENKLEP+RKMKIAAELELEP+QVTIWFQNRRARWK K+LE+DYG LK++
Sbjct: 70  QVKGLERHFEVENKLEPDRKMKIAAELELEPRQVTIWFQNRRARWKTKQLEKDYGVLKLN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVKEL 154

[Close]
BLAST of Carg02983 vs. ExPASy TrEMBL
Match: A0A6J1IVI4 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC111480988 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.1e-31
Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LE+HFEVENKLEPERKMKIA ELELEP+QVTIWFQNRRARWK K+LERDYG LK +
Sbjct: 70  QVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKAN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVREL 154

[Close]
BLAST of Carg02983 vs. ExPASy TrEMBL
Match: A0A6J1FIN2 (homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC111446073 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.1e-31
Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LE+HFEVENKLEPERKMKIA ELELEP+QVTIWFQNRRARWK K+LERDYG LK +
Sbjct: 70  QVKALERHFEVENKLEPERKMKIATELELEPRQVTIWFQNRRARWKTKQLERDYGVLKAN 129

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YDALKLDYDVLEKENASLA+ V ++
Sbjct: 130 YDALKLDYDVLEKENASLASKVREL 154

[Close]
BLAST of Carg02983 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 113.6 bits (283), Expect = 8.4e-26
Identity = 51/86 (59.30%), Postives = 71/86 (82.56%), Query Frame = 0 

Query: 6   HRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKV 65
           +++K LEK+FE+ENKLEPERK+K+A EL L+P+QV +WFQNRRARWK K+LE+DYG LK 
Sbjct: 69  NQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKT 128

Query: 66  DYDALKLDYDVLEKENASLAANVSKI 92
            YD+L+ ++D L ++N SL   +SK+
Sbjct: 129 QYDSLRHNFDSLRRDNESLLQEISKL 154

[Close]
BLAST of Carg02983 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-25
Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LEK+FE+ENKLEPERK K+A EL L+P+QV +WFQNRRARWK K+LE+DYG LK  
Sbjct: 67  QVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQ 126

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           YD+L+ ++D L ++N SL   +SKI
Sbjct: 127 YDSLRHNFDSLRRDNDSLLQEISKI 151

[Close]
BLAST of Carg02983 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-25
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LEK+FE++NKLEPERK+K+A EL L+P+QV IWFQNRRARWK K+LERDYG LK +
Sbjct: 80  QVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSN 139

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           +DALK + D L+++N SL   + ++
Sbjct: 140 FDALKRNRDSLQRDNDSLLGQIKEL 164

[Close]
BLAST of Carg02983 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-25
Identity = 51/85 (60.00%), Postives = 70/85 (82.35%), Query Frame = 0 

Query: 7   RLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDYGALKVD 66
           ++K LEK+FE++NKLEPERK+K+A EL L+P+QV IWFQNRRARWK K+LERDYG LK +
Sbjct: 62  QVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSN 121

Query: 67  YDALKLDYDVLEKENASLAANVSKI 92
           +DALK + D L+++N SL   + ++
Sbjct: 122 FDALKRNRDSLQRDNDSLLGQIKEL 146

[Close]
BLAST of Carg02983 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 98.6 bits (244), Expect = 2.8e-21
Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MNVESHRLKGLEKHFEVENKLEPERKMKIAAELELEPKQVTIWFQNRRARWKAKKLERDY 60
           +N+E  ++K LEK+FE+ NKLEPERKM++A  L L+P+Q+ IWFQNRRARWK K+LE+DY
Sbjct: 89  LNME--QVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDY 148

Query: 61  GALKVDYDALKLDYDVLEKENASLAANV 89
             LK  +D LK + D+L+  N  L A +
Sbjct: 149 DTLKRQFDTLKAENDLLQTHNQKLQAEI 174

The following BLAST results are available for this feature:
BLAST of Carg02983 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024557.19.2e-43100.00Homeobox-leucine zipper protein ATHB-6, partial [Cucurbita argyrosperma subsp. a... [more]
KAA0038691.12.1e-3181.18homeobox-leucine zipper protein ATHB-6-like [Cucumis melo var. makuwa][more]
XP_008466655.12.1e-3181.18PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo] >TYK31302.... [more]
XP_022982007.11.1e-3081.18homeobox-leucine zipper protein ATHB-5-like [Cucurbita maxima][more]
XP_022940501.11.1e-3081.18homeobox-leucine zipper protein ATHB-5-like [Cucurbita moschata][more]
BLAST of Carg02983 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P466681.2e-2459.30Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6... [more]
Q940J13.4e-2461.18Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-... [more]
P466675.8e-2460.00Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana OX=3702 GN=ATHB-5... [more]
Q9XH371.4e-2255.29Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica OX=39946 GN=H... [more]
Q6K4981.4e-2255.29Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
BLAST of Carg02983 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TAR11.0e-3181.18Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3E5X11.0e-3181.18Homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CRT31.0e-3181.18homeobox-leucine zipper protein ATHB-6-like OS=Cucumis melo OX=3656 GN=LOC103504... [more]
A0A6J1IVI45.1e-3181.18homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1FIN25.1e-3181.18homeobox-leucine zipper protein ATHB-5-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of Carg02983 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G22430.18.4e-2659.30homeobox protein 6 [more]
AT4G40060.12.4e-2561.18homeobox protein 16 [more]
AT5G65310.14.1e-2560.00homeobox protein 5 [more]
AT5G65310.24.1e-2560.00homeobox protein 5 [more]
AT1G69780.12.8e-2154.55Homeobox-leucine zipper protein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 53..87
NoneNo IPR availableGENE3D1.10.10.60coord: 2..61
e-value: 4.7E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR24326:SF547HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX4coord: 6..89
NoneNo IPR availablePANTHERPTHR24326HOMEOBOX-LEUCINE ZIPPER PROTEINcoord: 6..89
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 3..58
e-value: 7.7E-10
score: 48.7
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 3..52
e-value: 3.4E-16
score: 58.8
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 1..54
score: 15.531716
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 8..55
e-value: 2.00423E-12
score: 54.5569
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 54..90
e-value: 2.8E-13
score: 49.8
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 29..52
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 5..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02983-RACarg02983-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding