Carg02750 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02750
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF538
Location	Carg_Chr02: 7053453 .. 7056120 (-)
RNA-Seq Expression	Carg02750
Synteny	Carg02750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGATTTTTAGCTAAACATAGTCAATCTTGATCAACAACAATCCGTACGCCGCACCAAATCGATTGCTCGCTCGAACCCCTCCTTTCGGAGTTCAATCAATCTTTCATTTCTGCCTTCTCCAAGAACACAGCCATGGCGCCGACCCCTAAATCTCATCTGGGTGTAGTCTTTTTTACCTTCATCGCCTTCTTGGCTTCGATTCCTGAGCTTGCTGTGGCCGGATCGGATGCTCCCACGGTCTATGATATTCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTATCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTTAAATACGGCTCCATCACTGATCTCGACGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAATATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTATTGTCTTGACTCCTGGAAACGGATTCTTGAGGTATATTCTTAGCCGCCATTCGCTATTGTCAAATCTTTCCTGCTTTGGATTATCTACTTTCGAATCTTGTTTAACTCATGGGTATCTGTTTGTAATCGCTCTGGTTTGTTCGTGATTAGAACTCTTTGATTTTGGTGCTTTTTATTGTTCTTCCATTCGATGCAGTAAAATTTGTTCAAGATGTTTTACAGATTCTTTGGACTTCAGAGAAATCTTGCATTTAAAACACGATGGCGTGTATGAACTCGATTGTTAAATGAAACCAGTTCAAGAGAATTTAGACCTTGTTCTGTCAAAATTTATGTTTAGTACCCCACGTCGAATATTTCTTTTCAAGCGTTGATTTTTGGTGAGCGCATCATTCTGTGTCTTGAAGTTATCATCTTGTTGGGCAGCCTTTGTCATGACGTGATCAGGATTTTTTTGGTAGAAAATTGTTTGCTTATTTTTTTAAATAGGCAATGAACGAATTTATTGACCAAAACACATAAACAATATACTAAAAGGAGAAGGAATAACTCCAAATGGTCAAGGGAATTACGAAAAGGACTTCCATCCAAGGGAAAATTGTTTGTCATTCAGGATGTTTGATGGCTTTGATCCAATTTTATAGAACCAAACCATTTTGAAGCATTTCAGTGTCTATATCCCTTTTGAATTCCTTTGCTATAAGAAAATTGAACCTCTGAACAATAATCTGGACCTTGAGGAGCCTCGTCTTTCGCTCTTCTCAGTTCTCTGAAATGTTCTGAGATAACAGTCAGTGTTTAATTAGTTTTTGACCTTCATATGAAGAAAATGAGGAATATGAACTCAAATTGGCTGATCTTGGCTCTGTCCAGGTTGATTCAATTAAGTTTGGGCGAGTTGCATTTGTTTGTGGTATTAGAACTTGTAATTCCACACCTTTATTGAGTTTAAATTATATTTCATAGTCATTAGGCTGCAACTGTCATATATTGTTATTCAGGACTTGTCACAACTTCAGTGAACAGGTGATCAGATTAAGCTAGACTGCCTTCATTTTGCCTCCTCTATTCTGTTAATGTTATTGTTTCAAATTCTGCTGATGTGATCTTCCAATGAAATGGCCATTTTGGTCGATCGATAATCTAATATGCTAGTTTCAATGAATCTCGTTCTTTAAATTTCATAGCTGCTTGGATTTGGATCAACTCATTGCACATGGCCACTCTGTTTCTCTCACTTATTGCTTGATCACATCGAAACTTCTCGAACATGTTGCTGTTAATTTATATTGGTCTTTGGCATTAGCTAGCTTATCCAGGGGGAATTGTGTAAGATATGCTCAGTTACAGGGTTGCTTTGTCTTTTAAGCACCAATATGCTTCACTAGGTTCAAAAAGCTTACTCACTTGTTGCAAATAAGTTCAAAGAATGTTACAAAGTGAGTATGGTTGGTGAGTGATTCTATCATGCTAATACTTTTTCATTGGTGATCACAGCTCCCAACTCCAGTTGACGACGTCCCGATGCTAGTCACCGAGTAGCCTCTTTGTCCCTTGTCCGAGTTTTTGGCCTTCTTGCTGCATTATCTAAATGACCAGAAGAAGAGGTTTAGTAGTTTTCGGTATGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAAAGCCACTATGATGGTATGTTAAATATTAGGTGAGTCTTGTGTTTGATCCTCAGAAAAAGTGCCTAAAACATTGGCATTTGAGGAACTATAAACTGAATGGATTTGAATGAGATGTGATATTAAATAGTATGAATTTGCTCACGTTTTATACTATGTTGCTGCTTACTCGTTGAATATGATTAAAGATCACCAAAGAATCTCTTCTCTTTTTCAATTGTCTAATGTTTCTTAGATTCTCTGAATTGTAGTCTTGAAATAGTTCATGGTGTTTGGTTGTGTTGCATGTTTCATCTTTATGGAGAATGAGATTTCTTTCAGATTCAATGGAATGGGGAATTATTTGACGATATTGGCTTATGTTTCATAAAGTTTTCTATTCAACTCTC

mRNA sequence

CAAGATTTTTAGCTAAACATAGTCAATCTTGATCAACAACAATCCGTACGCCGCACCAAATCGATTGCTCGCTCGAACCCCTCCTTTCGGAGTTCAATCAATCTTTCATTTCTGCCTTCTCCAAGAACACAGCCATGGCGCCGACCCCTAAATCTCATCTGGGTGTAGTCTTTTTTACCTTCATCGCCTTCTTGGCTTCGATTCCTGAGCTTGCTGTGGCCGGATCGGATGCTCCCACGGTCTATGATATTCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTATCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTTAAATACGGCTCCATCACTGATCTCGACGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAATATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTATTGTCTTGACTCCTGGAAACGGATTCTTGAGCTCCCAACTCCAGTTGACGACGTCCCGATGCTAGTCACCGAGTAGCCTCTTTGTCCCTTGTCCGAGTTTTTGGCCTTCTTGCTGCATTATCTAAATGACCAGAAGAAGAGGTTTAGTAGTTTTCGGTATGTGGTCTCAGTTTAGACGGCAAAATATGAATGTCTATCTTGGTAGACCTATGATGTAAAGCCACTATGATGGTATGTTAAATATTAGGTGAGTCTTGTGTTTGATCCTCAGAAAAAGTGCCTAAAACATTGGCATTTGAGGAACTATAAACTGAATGGATTTGAATGAGATGTGATATTAAATAGTATGAATTTGCTCACGTTTTATACTATGTTGCTGCTTACTCGTTGAATATGATTAAAGATCACCAAAGAATCTCTTCTCTTTTTCAATTGTCTAATGTTTCTTAGATTCTCTGAATTGTAGTCTTGAAATAGTTCATGGTGTTTGGTTGTGTTGCATGTTTCATCTTTATGGAGAATGAGATTTCTTTCAGATTCAATGGAATGGGGAATTATTTGACGATATTGGCTTATGTTTCATAAAGTTTTCTATTCAACTCTC

Coding sequence (CDS)

ATGGCGCCGACCCCTAAATCTCATCTGGGTGTAGTCTTTTTTACCTTCATCGCCTTCTTGGCTTCGATTCCTGAGCTTGCTGTGGCCGGATCGGATGCTCCCACGGTCTATGATATTCTCCCCCAATATGGGCTTCCGAGTGGCCTCTTACCTGACTCTGTCGTCGATTACTCCCTATCTTCCGATGGTCAATTTGTTGTTCATTTGGCCAAACCCTGTTATATCAACTTCGATTACTTGGTTTATTACGACAAGACCATTACTGGGAAGCTTAAATACGGCTCCATCACTGATCTCGACGGTATCGAGGTTCGGAAATTCTTGATGTGGCTCGATGTGAAGGAAATCAGAGTCGATTTGCCGCCTTCTGATAATATCTACTTCCAAGTTGGATTTATCAATAAGAAGCTCGACATCGATCAGTTTAAGACCGTTCATTCATGCCGGGACGATGGTTTGGGCTATTGTCTTGACTCCTGGAAACGGATTCTTGAGCTCCCAACTCCAGTTGACGACGTCCCGATGCTAGTCACCGAGTAG

Protein sequence

MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE

Homology

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BLAST of Carg02750 vs. NCBI nr
Match: XP_023534241.1 (uncharacterized protein LOC111795861 [Cucurbita pepo subsp. pepo] >KAG7035822.1 hypothetical protein SDJN02_02621 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.6 bits (958), Expect = 9.4e-100
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 179

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BLAST of Carg02750 vs. NCBI nr
Match: XP_022958129.1 (uncharacterized protein LOC111459451 [Cucurbita moschata])

HSP 1 Score: 371.3 bits (952), Expect = 4.6e-99
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSI DLDGIEVRKFLMWLDVKEIRVDL
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSIIDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 179

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BLAST of Carg02750 vs. NCBI nr
Match: KAG6605871.1 (hypothetical protein SDJN03_03188, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 368.2 bits (944), Expect = 3.9e-98
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPML 177
           PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPML
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPML 176

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BLAST of Carg02750 vs. NCBI nr
Match: XP_022995949.1 (uncharacterized protein LOC111491311 [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96
Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGV+FFTFIAFLASI ELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS
Sbjct: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLG CLDSWKRILELPTPVDD+ MLVTE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 179

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BLAST of Carg02750 vs. NCBI nr
Match: XP_038901968.1 (uncharacterized protein LOC120088626 [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-81
Identity = 145/179 (81.01%), Postives = 161/179 (89.94%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGV+FF    F  +IP ++ AGS APTVYD+LPQYGLPSGLLPDSVV+Y+LS
Sbjct: 1   MAPTPKSHLGVIFFISFVFFTAIPSISAAGSVAPTVYDVLPQYGLPSGLLPDSVVNYTLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVV+LAKPCYI+FDYLVYY KTITGKL+YGSI+DLDGIEV+KF +WLDVKEIRVDL
Sbjct: 61  SDGQFVVNLAKPCYIHFDYLVYYHKTITGKLEYGSISDLDGIEVQKFFLWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PPSDNIYFQVGFINKKLDIDQFKTVHSC+D GL   L SWKRILELP PVDD+ ML+TE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCQDSGLASSLGSWKRILELPPPVDDIQMLITE 179

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BLAST of Carg02750 vs. ExPASy TrEMBL
Match: A0A6J1H471 (uncharacterized protein LOC111459451 OS=Cucurbita moschata OX=3662 GN=LOC111459451 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.2e-99
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSI DLDGIEVRKFLMWLDVKEIRVDL
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSIIDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 179

[Close]

BLAST of Carg02750 vs. ExPASy TrEMBL
Match: A0A6J1K7B4 (uncharacterized protein LOC111491311 OS=Cucurbita maxima OX=3661 GN=LOC111491311 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.1e-97
Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60
           MAPTPKSHLGV+FFTFIAFLASI ELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS
Sbjct: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120
           SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLG CLDSWKRILELPTPVDD+ MLVTE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 179

[Close]

BLAST of Carg02750 vs. ExPASy TrEMBL
Match: A0A6J1JH99 (uncharacterized protein LOC111484366 OS=Cucurbita maxima OX=3661 GN=LOC111484366 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80
Identity = 142/178 (79.78%), Postives = 157/178 (88.20%), Query Frame = 0


Query: 2   APTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSS 61
           APT  SHLGV+FFT   FLA++P + VA  DAPTVYDILPQYGLPSGLLPDSV+DY+LSS
Sbjct: 3   APTTNSHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSS 62

Query: 62  DGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLP 121
           DGQFVVHLAKPCY+ FDYLVYY  TITGKL+YGSIT LDGIEV+K  +W DVKEIRVDLP
Sbjct: 63  DGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLP 122

Query: 122 PSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PS NIYFQVGFINKKLD DQFKTVHSC+D+GLG CL SWKRILELPTP+DD+ ML+TE
Sbjct: 123 PSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 180

[Close]

BLAST of Carg02750 vs. ExPASy TrEMBL
Match: A0A6J1FT68 (uncharacterized protein LOC111448547 OS=Cucurbita moschata OX=3662 GN=LOC111448547 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80
Identity = 141/178 (79.21%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 2   APTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSS 61
           APT  SHLGV+FFT   FLA++P ++VA  DAPTVYDIL QYGLPSGLLPDSV+DY+LSS
Sbjct: 3   APTTNSHLGVIFFTSFVFLATLPSVSVAAPDAPTVYDILTQYGLPSGLLPDSVIDYTLSS 62

Query: 62  DGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLP 121
           DGQFVVHLAKPCY+ FDYLVYY  TITGKL+YGSIT LDGIEV+K  +W DVKEIRVDLP
Sbjct: 63  DGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLP 122

Query: 122 PSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           PSDNIYFQVGFINKKLD DQFK+VHSC+D+GLG CL SWKRILELPTP+DD+ ML+TE
Sbjct: 123 PSDNIYFQVGFINKKLDADQFKSVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 180

[Close]

BLAST of Carg02750 vs. ExPASy TrEMBL
Match: A0A5A7TFM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00460 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 140/173 (80.92%), Postives = 157/173 (90.75%), Query Frame = 0


Query: 7   SHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFV 66
           SHLG++FFTF  FL SIP L+ AGSDAPTVYD+LP+YGLPSGLLPDSV+DY+LSSDGQFV
Sbjct: 4   SHLGLIFFTFFVFLTSIPPLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 67  VHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNI 126
           VHLAKPCYI+FDYLVYY KTITGKL+YGSITDLDGIEV+K  +W DVKEIRVDLPPSDNI
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 127 YFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 180
           YFQVGFINKKLDIDQFKT+HSC+D+ L   L SWKRILELP P+DD+ ML+TE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALASSLGSWKRILELPPPIDDIQMLITE 176

[Close]

BLAST of Carg02750 vs. TAIR 10
Match: AT5G19860.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 214.2 bits (544), Expect = 8.8e-56
Identity = 103/174 (59.20%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 9   LGVVFFTFIAFLASIPELAVAGSDA-PTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVV 68
           + +  F+   F  +   L     D+  TVY++LP+YGLPSGLLPD+V D++LS DG+FVV
Sbjct: 8   ISIFIFSLTLFTTTTHSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLSDDGRFVV 67

Query: 69  HLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIY 128
           HL   C I FDYLV+YDKTI+G++ YGSIT+L GI+V+KF +WLDV EI+VDLPPSD+IY
Sbjct: 68  HLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIY 127

Query: 129 FQVGFINKKLDIDQFKTVHSCRDDGL-GYCLDSWKRILEL-PTPVDDVPMLVTE 180
           F+VGFINKKLDIDQFKT+HSC D+G+ G C DSWK  LE     +D+  ML+TE
Sbjct: 128 FKVGFINKKLDIDQFKTIHSCHDNGVSGSCGDSWKSFLEKGQGMMDEAEMLITE 181

[Close]

BLAST of Carg02750 vs. TAIR 10
Match: AT1G55265.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-26
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 33  APTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINF-DYLVYYDKTITGKL 92
           A  ++D+LP+YG P GLLP++V  Y++S DG F V L   CY+ F D LV+Y K I GKL
Sbjct: 51  ADDIHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNIAGKL 110

Query: 93  KYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTVHSC 149
            YGS+ D+ GI+ ++  +WL +  +  D P S  + F VGF++K L    F+ V SC
Sbjct: 111 SYGSVKDVRGIQAKEAFLWLPITAMESD-PSSATVVFSVGFVSKTLPASMFENVPSC 166

[Close]

BLAST of Carg02750 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-24
Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 26  LAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSDGQFVVHLAKPCYINFDYLVYYDK 85
           L+++    PTV+D+L   GLP+GLLP  V  Y L +DG+  V LA PCY  F+  V+++ 
Sbjct: 19  LSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEA 78

Query: 86  TITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQVGFINKKLDIDQFKTV 145
            + G L YGS+  ++G+  ++  +WL VK+I V+ P S  I F +G   K+L +  F+  
Sbjct: 79  VVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDP 138

Query: 146 HSCRDDGL 154
             C+ DG+
Sbjct: 139 PKCKPDGV 146

[Close]

BLAST of Carg02750 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-21
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 12  VFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSD-GQFVVHLA 71
           + F  +  +A I  ++ A S+  T+Y+IL   GLPSG+ P  V +++   + G+F V+L 
Sbjct: 8   IAFLCLVLVAGI-SISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLN 67

Query: 72  KPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNIYFQV 131
           + C   ++  ++YD  ITG +    I+DL GI  ++  +W  VK IRVD+P S  IYF V
Sbjct: 68  QACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDV 127

Query: 132 GFINKKLDIDQFKTVHSC 149
           G + K+  +  F+T   C
Sbjct: 128 GVVRKQYSLSLFETPRDC 144

[Close]

BLAST of Carg02750 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-19
Identity = 47/142 (33.10%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 9   LGVVFFTFIAF-LASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLSSD-GQFV 68
           L +V  T + F LA+   ++   ++  ++ +IL   GLP GL P  V  ++++ + G+F 
Sbjct: 2   LRIVQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFS 61

Query: 69  VHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDLPPSDNI 128
           V+L + C   ++  ++YD+ ++G + Y  I DL GI  ++  +WL VK IRVD+P S  I
Sbjct: 62  VYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLI 121

Query: 129 YFQVGFINKKLDIDQFKTVHSC 149
           +F VG + K+  +  F+T   C
Sbjct: 122 FFDVGVLRKQYSLSLFETPRDC 143

The following BLAST results are available for this feature:

BLAST of Carg02750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534241.1	9.4e-100	100.00	uncharacterized protein LOC111795861 [Cucurbita pepo subsp. pepo] >KAG7035822.1 ...	[more]
XP_022958129.1	4.6e-99	99.44	uncharacterized protein LOC111459451 [Cucurbita moschata]	[more]
KAG6605871.1	3.9e-98	100.00	hypothetical protein SDJN03_03188, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995949.1	1.3e-96	97.21	uncharacterized protein LOC111491311 [Cucurbita maxima]	[more]
XP_038901968.1	5.7e-81	81.01	uncharacterized protein LOC120088626 [Benincasa hispida]	[more]

BLAST of Carg02750 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H471	2.2e-99	99.44	uncharacterized protein LOC111459451 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A6J1K7B4	6.1e-97	97.21	uncharacterized protein LOC111491311 OS=Cucurbita maxima OX=3661 GN=LOC111491311...	[more]
A0A6J1JH99	1.0e-80	79.78	uncharacterized protein LOC111484366 OS=Cucurbita maxima OX=3661 GN=LOC111484366...	[more]
A0A6J1FT68	2.3e-80	79.21	uncharacterized protein LOC111448547 OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]
A0A5A7TFM6	1.2e-79	80.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg02750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19860.1	8.8e-56	59.20	Protein of unknown function, DUF538	[more]
AT1G55265.1	5.6e-26	44.44	Protein of unknown function, DUF538	[more]
AT5G54530.1	3.1e-24	38.28	Protein of unknown function, DUF538	[more]
AT3G07470.1	5.4e-21	35.51	Protein of unknown function, DUF538	[more]
AT3G07460.1	5.1e-19	33.10	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 25..150 e-value: 6.4E-36 score: 125.1
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 12..150
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 36..143 e-value: 5.8E-32 score: 110.4
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 14..177
None	No IPR available	PANTHER	PTHR31676:SF149	SUBFAMILY NOT NAMED	coord: 14..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02750-RA	Carg02750-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane