Carg02610 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02610
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr02: 7802179 .. 7802842 (+)
RNA-Seq Expression	Carg02610
Synteny	Carg02610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAACCCTAAGTCGTACCGGAAGGGGAAACTTACAGAGAAGTCGTCGTCGTTCCACGGCGAGAGACCGACGAAGACTGCGGCGACGCTCCGACGGCCGAAGACGGATCCGGAGTTATTGTCGTTCAAGAATCTAGGTTTATCGGTGCCGTCGCTGGATGGACGGCCGAAGATGACGAAGTTACTTTTCAACGTGACGATTCAGGGCAGTCTAGGTCCAGTACAAGTGTTGATGTCGCCGGATATGACCGTCGCCGATCTTGTGGCGGCGACCGTACGTCAATACTTGAAGGAAGCCCGCCGACCGATTCTGCCGACTGCAGATCCCTCCGCCTTCGACCTCCATTATTCACAATTCAGCTTAGAAAGTAAGCAATCGATCATCAACCTCGCAACCGCATTTGATTTTGATTGATTTTTGATCTATTATGAATTTCGCGGGCGATTCTAACGAGGTAATGATCTGAATCTCAGGTTTGAATGAGGATGAGAAGCTAATCGCCTTGGGATCTAGAAACTTCTTTCTGTGCCCTAGAAAATCGGAGGATAACAACGATTTAGTAGCTTCTTCATCGTCGTCGTCCTGCTCGACACAGGCCAAAGAAAACGCGAAGAGTTCCAGCGGTTTCAGTTGGTTCAAATTCATCGAATTCCGGATTTAG

mRNA sequence

ATGCCGAACCCTAAGTCGTACCGGAAGGGGAAACTTACAGAGAAGTCGTCGTCGTTCCACGGCGAGAGACCGACGAAGACTGCGGCGACGCTCCGACGGCCGAAGACGGATCCGGAGTTATTGTCGTTCAAGAATCTAGGTTTATCGGTGCCGTCGCTGGATGGACGGCCGAAGATGACGAAGTTACTTTTCAACGTGACGATTCAGGGCAGTCTAGGTCCAGTACAAGTGTTGATGTCGCCGGATATGACCGTCGCCGATCTTGTGGCGGCGACCGTACGTCAATACTTGAAGGAAGCCCGCCGACCGATTCTGCCGACTGCAGATCCCTCCGCCTTCGACCTCCATTATTCACAATTCAGCTTAGAAAGTTTGAATGAGGATGAGAAGCTAATCGCCTTGGGATCTAGAAACTTCTTTCTGTGCCCTAGAAAATCGGAGGATAACAACGATTTAGTAGCTTCTTCATCGTCGTCGTCCTGCTCGACACAGGCCAAAGAAAACGCGAAGAGTTCCAGCGGTTTCAGTTGGTTCAAATTCATCGAATTCCGGATTTAG

Coding sequence (CDS)

ATGCCGAACCCTAAGTCGTACCGGAAGGGGAAACTTACAGAGAAGTCGTCGTCGTTCCACGGCGAGAGACCGACGAAGACTGCGGCGACGCTCCGACGGCCGAAGACGGATCCGGAGTTATTGTCGTTCAAGAATCTAGGTTTATCGGTGCCGTCGCTGGATGGACGGCCGAAGATGACGAAGTTACTTTTCAACGTGACGATTCAGGGCAGTCTAGGTCCAGTACAAGTGTTGATGTCGCCGGATATGACCGTCGCCGATCTTGTGGCGGCGACCGTACGTCAATACTTGAAGGAAGCCCGCCGACCGATTCTGCCGACTGCAGATCCCTCCGCCTTCGACCTCCATTATTCACAATTCAGCTTAGAAAGTTTGAATGAGGATGAGAAGCTAATCGCCTTGGGATCTAGAAACTTCTTTCTGTGCCCTAGAAAATCGGAGGATAACAACGATTTAGTAGCTTCTTCATCGTCGTCGTCCTGCTCGACACAGGCCAAAGAAAACGCGAAGAGTTCCAGCGGTTTCAGTTGGTTCAAATTCATCGAATTCCGGATTTAG

Protein sequence

MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKFIEFRI

Homology

[Close]

BLAST of Carg02610 vs. NCBI nr
Match: KAG6606010.1 (hypothetical protein SDJN03_03327, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035960.1 hypothetical protein SDJN02_02760, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60
           MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT
Sbjct: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60

Query: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120
           KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF
Sbjct: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120

Query: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180
           SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF
Sbjct: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180

Query: 181 IEFRI 186
           IEFRI
Sbjct: 181 IEFRI 185

[Close]

BLAST of Carg02610 vs. NCBI nr
Match: XP_022958439.1 (uncharacterized protein At4g22758 [Cucurbita moschata])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60
           MPNPKSYRKGKLTEKSSSFHGE+PTKTAATLRRPKTDPELLSFKNLGLS PSLDGRPKMT
Sbjct: 1   MPNPKSYRKGKLTEKSSSFHGEKPTKTAATLRRPKTDPELLSFKNLGLSAPSLDGRPKMT 60

Query: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120
           KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF
Sbjct: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120

Query: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180
           SLESLNEDEKLIALGSRNFFLCPRKSEDN+DLVASSSSSSCSTQAKENAKSSSGFSWFKF
Sbjct: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180

Query: 181 IEFRI 186
           IEFRI
Sbjct: 181 IEFRI 185

[Close]

BLAST of Carg02610 vs. NCBI nr
Match: XP_023532120.1 (uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.9 bits (899), Expect = 6.7e-93
Identity = 180/185 (97.30%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60
           MPNPKSYRKGKLTEKSSSFHGE+P+KTAATLRRPKTDPELLSFKNLGLS PSLDGRPKMT
Sbjct: 1   MPNPKSYRKGKLTEKSSSFHGEKPSKTAATLRRPKTDPELLSFKNLGLSAPSLDGRPKMT 60

Query: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120
           KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF
Sbjct: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120

Query: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180
           SLESLNEDEKLIALGSRNFFLCPRKSEDN+DL+ASSSSSSCSTQAKENAKSSSGFSWFKF
Sbjct: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNDDLLASSSSSSCSTQAKENAKSSSGFSWFKF 180

Query: 181 IEFRI 186
           IEFRI
Sbjct: 181 IEFRI 185

[Close]

BLAST of Carg02610 vs. NCBI nr
Match: XP_022996181.1 (uncharacterized protein At4g22758-like [Cucurbita maxima])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60
           MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFK LGLS PSLDGRPKMT
Sbjct: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMT 60

Query: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120
           KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF
Sbjct: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120

Query: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180
           SLESLNEDEKLIALGSRNFFLCPRKSEDN+DLVASSSSSSCSTQAKENAKSSS FSWFKF
Sbjct: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWFKF 180

Query: 181 IEFRI 186
           IEFRI
Sbjct: 181 IEFRI 185

[Close]

BLAST of Carg02610 vs. NCBI nr
Match: XP_004145782.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN46917.1 hypothetical protein Csa_020746 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 163/187 (87.17%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGL--SVPSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE  TKTA  LRRPKTDPELLSFKNLGL  S PSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAFDLHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWF 180
           QFSLESLN++EKLIALGSRNFFLCP+KS+DNNDL+ASSSSSSCS +AKE+AKSSS FSWF
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPKKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWF 180

Query: 181 KFIEFRI 186
           KFI+FRI
Sbjct: 181 KFIDFRI 187

[Close]

BLAST of Carg02610 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.9e-08
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 0


Query: 22  ERPTKTAATLRRPKTD-----PELLSFKNLGLSVP-SLDGRPK-MTKLLFNVTIQGSLGP 81
           E  TK    L R +++     P LL+  +   S P + +G  K   K++ +V ++GS GP
Sbjct: 77  EEETKPIVYLPRIRSEVFASSPSLLNLYSPSSSSPINQEGNTKEAPKVIISVAVEGSPGP 136

Query: 82  VQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESLNEDEKLIAL 141
           V+ ++     V + +   V +Y KE R P L     SAF+LH S FS++ L + E +  L
Sbjct: 137 VRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDR--DSAFELHQSHFSIQCLEKREIIGEL 196

Query: 142 GSRNFFLCPRKSEDNNDLVASS 157
           GSR+F++  +  E        S
Sbjct: 197 GSRSFYMRKKAPETGGSFAGIS 216

[Close]

BLAST of Carg02610 vs. ExPASy TrEMBL
Match: A0A6J1H539 (uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111459661 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.0e-94
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60
           MPNPKSYRKGKLTEKSSSFHGE+PTKTAATLRRPKTDPELLSFKNLGLS PSLDGRPKMT
Sbjct: 1   MPNPKSYRKGKLTEKSSSFHGEKPTKTAATLRRPKTDPELLSFKNLGLSAPSLDGRPKMT 60

Query: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120
           KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF
Sbjct: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120

Query: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180
           SLESLNEDEKLIALGSRNFFLCPRKSEDN+DLVASSSSSSCSTQAKENAKSSSGFSWFKF
Sbjct: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180

Query: 181 IEFRI 186
           IEFRI
Sbjct: 181 IEFRI 185

[Close]

BLAST of Carg02610 vs. ExPASy TrEMBL
Match: A0A6J1K3Z9 (uncharacterized protein At4g22758-like OS=Cucurbita maxima OX=3661 GN=LOC111491488 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.5e-93
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGLSVPSLDGRPKMT 60
           MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFK LGLS PSLDGRPKMT
Sbjct: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMT 60

Query: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120
           KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF
Sbjct: 61  KLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQF 120

Query: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKF 180
           SLESLNEDEKLIALGSRNFFLCPRKSEDN+DLVASSSSSSCSTQAKENAKSSS FSWFKF
Sbjct: 121 SLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWFKF 180

Query: 181 IEFRI 186
           IEFRI
Sbjct: 181 IEFRI 185

[Close]

BLAST of Carg02610 vs. ExPASy TrEMBL
Match: A0A0A0KES9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G150560 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.9e-83
Identity = 163/187 (87.17%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGL--SVPSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE  TKTA  LRRPKTDPELLSFKNLGL  S PSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAFDLHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWF 180
           QFSLESLN++EKLIALGSRNFFLCP+KS+DNNDL+ASSSSSSCS +AKE+AKSSS FSWF
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPKKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWF 180

Query: 181 KFIEFRI 186
           KFI+FRI
Sbjct: 181 KFIDFRI 187

[Close]

BLAST of Carg02610 vs. ExPASy TrEMBL
Match: A0A5A7SQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00230 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 163/188 (86.70%), Postives = 174/188 (92.55%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGL--SVPSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE PTKTA  LRRPKTDPELLSFKNLGL  S PSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESPTKTATMLRRPKTDPELLSFKNLGLPASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAF LHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFGLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKS-SSGFSW 180
           QFSLESLN++EKLIALGSRNFFLCPRKS+DNNDL+AS SSSSCS +AKE+AKS SS FSW
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPRKSDDNNDLIASPSSSSCSKEAKESAKSNSSSFSW 180

Query: 181 FKFIEFRI 186
           FKFI+FRI
Sbjct: 181 FKFIDFRI 188

[Close]

BLAST of Carg02610 vs. ExPASy TrEMBL
Match: A0A1S3C8V7 (uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103497975 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 163/188 (86.70%), Postives = 174/188 (92.55%), Query Frame = 0


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKNLGL--SVPSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE PTKTA  LRRPKTDPELLSFKNLGL  S PSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESPTKTATMLRRPKTDPELLSFKNLGLPASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAF LHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFGLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKS-SSGFSW 180
           QFSLESLN++EKLIALGSRNFFLCPRKS+DNNDL+AS SSSSCS +AKE+AKS SS FSW
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPRKSDDNNDLIASPSSSSCSKEAKESAKSNSSSFSW 180

Query: 181 FKFIEFRI 186
           FKFI+FRI
Sbjct: 181 FKFIDFRI 188

[Close]

BLAST of Carg02610 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 4.7e-44
Identity = 103/182 (56.59%), Postives = 131/182 (71.98%), Query Frame = 0


Query: 5   KSYRKGKLTEKSSSFHGE--RPTKTAATLRRPKTDPELLSFKNLGLSVP-SLDGRPKMTK 64
           KS+R+ KL+EK+ SFHG    P      LRRPKT PEL S     ++VP ++   P++TK
Sbjct: 14  KSHRR-KLSEKAMSFHGRGTTPLSNPGELRRPKTLPELFS-TGQSITVPETVSLPPRLTK 73

Query: 65  LLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFS 124
           LL NVT+QGSLG VQ+++SP+ TV+DL+ A VRQY+KEARRP LP ++PS FDLHYSQFS
Sbjct: 74  LLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFS 133

Query: 125 LESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCSTQAKENAKSSSGFSWFKFI 184
           LES+  DEKLI+LGSRNFFLC RK E    +    SS SCS +A++ AK  +GF W KF+
Sbjct: 134 LESIVRDEKLISLGSRNFFLCGRK-ETGGFIGCGLSSESCSKEAEKVAK--TGFHWLKFM 190

[Close]

BLAST of Carg02610 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). )

HSP 1 Score: 58.9 bits (141), Expect = 4.9e-09
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 0


Query: 22  ERPTKTAATLRRPKTD-----PELLSFKNLGLSVP-SLDGRPK-MTKLLFNVTIQGSLGP 81
           E  TK    L R +++     P LL+  +   S P + +G  K   K++ +V ++GS GP
Sbjct: 77  EEETKPIVYLPRIRSEVFASSPSLLNLYSPSSSSPINQEGNTKEAPKVIISVAVEGSPGP 136

Query: 82  VQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESLNEDEKLIAL 141
           V+ ++     V + +   V +Y KE R P L     SAF+LH S FS++ L + E +  L
Sbjct: 137 VRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDR--DSAFELHQSHFSIQCLEKREIIGEL 196

Query: 142 GSRNFFLCPRKSEDNNDLVASS 157
           GSR+F++  +  E        S
Sbjct: 197 GSRSFYMRKKAPETGGSFAGIS 216

[Close]

BLAST of Carg02610 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.3e-06
Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 58  KMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHY 117
           K  ++L +VT+ GS GP++ +   D  VA ++   ++ Y +E R P+L  +D + F L+ 
Sbjct: 14  KGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLL-GSDFNDFLLYC 73

Query: 118 SQFSLESLNEDEKLIALGSRNFFLCPRKSEDNNDLVASSSSSSCST 164
                E+L+  + + +LG+RNF LC RK E+    V  S+  S ST
Sbjct: 74  PMVGPEALSTWDAIGSLGARNFMLC-RKPEEKK--VEESNGRSDST 115

The following BLAST results are available for this feature:

BLAST of Carg02610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606010.1	4.2e-95	100.00	hypothetical protein SDJN03_03327, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022958439.1	1.0e-93	98.38	uncharacterized protein At4g22758 [Cucurbita moschata]	[more]
XP_023532120.1	6.7e-93	97.30	uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996181.1	1.1e-92	97.84	uncharacterized protein At4g22758-like [Cucurbita maxima]	[more]
XP_004145782.1	1.8e-82	87.17	uncharacterized protein At4g22758 [Cucumis sativus] >KGN46917.1 hypothetical pro...	[more]

BLAST of Carg02610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XJ7	6.9e-08	30.99	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P...	[more]

BLAST of Carg02610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H539	5.0e-94	98.38	uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111459661 ...	[more]
A0A6J1K3Z9	5.5e-93	97.84	uncharacterized protein At4g22758-like OS=Cucurbita maxima OX=3661 GN=LOC1114914...	[more]
A0A0A0KES9	8.9e-83	87.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G150560 PE=4 SV=1	[more]
A0A5A7SQA1	2.9e-81	86.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C8V7	2.9e-81	86.70	uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103497975 PE=4 S...	[more]

BLAST of Carg02610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27830.1	4.7e-44	56.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22758.1	4.9e-09	30.99	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT1G70780.1	2.3e-06	33.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..35
None	No IPR available	PANTHER	PTHR33270:SF24	EXPRESSED PROTEIN	coord: 7..183
IPR040358	Uncharacterized protein At4g22758-like	PANTHER	PTHR33270	BNAC05G50380D PROTEIN	coord: 7..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02610-RA	Carg02610-RA	mRNA