Carg02604 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02604
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein RETICULATA-RELATED 1, chloroplastic
Location	Carg_Chr02: 7855378 .. 7859211 (-)
RNA-Seq Expression	Carg02604
Synteny	Carg02604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCCGCCGATTCCTTGTAGTTTTTTGCTTCTCCTCCAAACACAATTTAGGTTTTGGTTTCTGATCGTTTTTCTTCCACATTCTTCAAGTCGTCAACCATTTATTTCTAGGGCCTGCCTTTCTTGCAAAGATAGCTGCCATTAATATGTCACTAACCTCGCCCTGCTTCAATCTCATCCATTCCGCCATTACTTCCACCCCAGATGCCTTTCCTTCGAAACTCGAAGTTAGAGCTTCGGGATGCTTTACATGGCCTTGTTCTGAATCCAGGAGCTCCTTTAAGGTTGTTTCTCTTCATTATTCATCGAATGTGAGCTGCCGGATTCCACTTCAGTGTTTTTCGTCCGAGGCGGCGGCTGAGACGATCGCGGCGGCGAAGGACTCTAAGGTCTTTGATACTGATTTTGAATCTCGAATAGGTGGGGATGGTGGTTTTGGAGGAGATGGAAACGGTTTTGGTGGCAGCGGCGGCGGCGGTGACGGCGGCGATGGAAATGGTGATGGCGAGGAGGAGAGGGAATTTGGACGGATATTGAAATTCGACGACGTGATCAAGGAGGCTGACGCTCGAGGAGTTAGACTTCCTGAGGATATGCTCGAGGCTGCTAAGGCAACCGGGATACGGGAAGTTTTTCTTCAGCGTTACTTGGACTTGCAGGTACAATCCATTTCTCAAGTTCGTGAAAGTAAATGAATCGAAAGCATCATGCGTAGCACTTGAAACTGTTGCATGCCTGTCGCTCTTGTGCTTGCTGTTTTAACAACTCCTTGCAGGATTACCTTATTTGTTTCACTGTTCTTCAGGGTGAAATTCAACAAAGCAATTGTTATCAGCTGTAAATTCAGCAACCTCAAGAGATTTTGTTGATTTGTGGGACATGAAGAACGTTTTTGAGAATGAAATTGTGCTGGATATGTGTAACTTTTCTCATATAATTGAACAAACCATTAGTTTCACTGCCCTGTCACCATGATTCTCCTTTAAATCTCTCTATTTTCCCTCATGTATATATCAGTTAGAATCCTTCTCCCCTTCATCCTTTCGAAATTGGTGGTGTATGATTGCTTTTTGCTTGAGCATAAAGATGATTTTTTTTTTTCTAATTTTGAAAACAAATATCTATCAAAATAATGAAGGAAATTTTCTTTTGGTGTTTTACAGGGGTCAGGTTGGTTGTTAGGCTTCTTGATGAATTCCTGCTCCATGTTTCGTGACCGAATGCTAGCAGATCCTTCTTTTCTTTTTAAAGTCGGAACAGAGGTTTGTTTTGGTGTTATTAAAATTCAATGCAAGCTAATGATCCACAACTCTCGCTGTAGTTTTGCATTGTTAGCAATGAGTTAATTTTCTCCTATAGTTGCTAATTGTTGACATTTATAGCAGCGTTGTTGGCGTTTAAATTCAGGATTTGAGAACCTTGATTAATTCTCAGATGACTTGTTGATTAATTGTAAAATACAATTCCCAATTAATGGATCTAATGAGCTTTGCTGATGCAGGTGGTTATAGATTCATGCTGTGCTACATTTGCTGAAGTGCAGAAAAGGGGAGAGAATTTCTGGGCAGAGTTTGAGTTATTTGCTGCTGATCTTTTAGTTGGTGTTGTGGTTGACATTGCTTTGGTTGGTATGTTAGCACCATATGCTCGTATAGGACAGCGGCCTGTATCAAGAGGTTTATTAGGACAAATGCAGCGTGCTTATTCTTCTCTTCCTAGCAGGTTAATATCACATGACACGTTTTATGATGAAATTTTCAGTACCCTTATAAGTTCCAGACTTGTAGTTCCCTTACCTTCTTTTATATTTTATTTAGTTCTTGCTGCTGTATGCTTGACAAAGTTTCTTGAGCCACTACTTTGTTTAGTACATATTTTTTTCTTTTGAAGATGAGATGATATTCTCTAAACATTGGACAGAAAATCAGTCTCTCCGATATTTGGCCTCAATTTGCTGACCATTCTCAATTTTCTTTGAATTTAGAATTTCCACGCTCCATCTTGACTTCTATAATTAATTACCCTTTTTTTGCCTCTGCAGTGTTTTTGAAGCTGAAAGGCCCGGGTGTAAATTCACAGTGAAGCAGCGAATTGCATCATTTTTCTACAAGGTACTGATTTCATTTTTTTAAAGCAATTGAAGTTACTTTCTCATCCTTGTTTCTTTATCTTGTTTTGGAACTTAGTTTTCGAGGTATGGCTTTGTTTTTCTTGTTACTGCTGTATCTTTTGGGGGGTTTGATTTAACTTATAATTATTGGTGCATTTTTGTCCAGGGTGTCTTGTATGGCTCAGTGGGATTTGGATGTGGTCTCATTGGCCAGGGGATTGCTAATTTGATCATGAACACAAAACGGTAAGCTTGTTTAAATATGTCTTGCATGCCTTGTTTTCTACTATTATTAGACTACCCTATATTTTTAAATTGGTCATGTAGTTGTTTACCTTAAAAAGAAGTTCACCTGTTGGTGTTGATCAACCCATGAACTTTGATTTGTTCTTCGACTGATGTGTGTTTTTAGAACAGATGTGCCATTGTCACAATCCATTTCTGATGATTGATTATAGACCGATTGATGTAGGACACACTAAACAATTACAGTTAACCGAGGAGTTGAATATGACATAGTTCTAAAATGATAGTAAAATATACAAGTACAGAATGTGGGACTCCCAAAATCTTGTGTCTGCTTTGAATTGTCATAAAAAGTTGTGTTTTATGATAGGCATAAGATTCCAATTTTTTGTATTGCTTTAGTCATTAATTTTATAATTTCTCGGATATAACTGTTAGCTATAGAAAAAAGAATATAAAGATATAGCTGATGCTTTTTGCTTTGTATTTATTTCTAGTTTGTCGAATTATATTTTTCTATCATTCTTTATTTGTCCCTTGAATCTTTTCGAAAATGACATGTCGTCTGATTGCATGTGTTGTATATTTTCCTTAAAGAACCTTGAATCTATCATGTCATCTGTTCCCTCCAAGTTGTTGAAGACCTATTTCAATGTTTGAAATACTTGATTATGAATTATGATAACCGTAAAAAGTTAAAATATCTTTTGATTTATACATTAGATGACCATTATATCTCTGTCTTGATATTTATCTTGGGAACTGTATTTAATGATTCAGGTGTATAAAGAAATCAGATGAGGATGTGCGTGTGCCTCCTCTCGTTCAGAGTGCCGTTCTCTGGGGTATACATCTCATCTGTTCCTTGAATCCTCACTATTTTACTTTACTAATCTGTTTTGTCTTAATATAAGTAGGTTCACGTTCTTCTGAATTAATCTGAATCAATTTAGCTTAATACATCATCAATAATTTAGCTAAATTGTGATTCCTAGTCCGTAGTTTGGTGCACAAGTCACTCATTTCTTAGGATCTTACTTACTGGCCCTCCCATTTACTTTTATTAAACGTAAGTTTTGGTCAAGTTTCAACCTGGAATCGATATCAAATTCTTGCTGGAAAGCTTAACCAAAAGCCCCATTAGTTTTATCAGTCTGTTCTGTTCTATCCTCATGTCAACTACAACCTGCTGACTACTTTCATATATGTTAATTTAGTAACTCTAAAGCTTCTATTGTCCCTGATTCAGGTGTTTTCCTTGCGGTATCTTCCAACACTCGTTATCAAATTGTGAACGCACTCGAGCAGGTGGTCGAATTCTCGCCTTTGGCAAAGAAGATTCCACCGGTGGCAATGGCCTTCACAGTTGGTGTGAGGTTTGCCAACAACATTTATGGTGGTATGCAGTTTGTAGATTGGGCAAGATGGAGTGGTGTTCAATAAATTTAACATGCTGCATTCATTAGGTTAGGAATCTT

mRNA sequence

ATTTCCGCCGATTCCTTGTAGTTTTTTGCTTCTCCTCCAAACACAATTTAGGTTTTGGTTTCTGATCGTTTTTCTTCCACATTCTTCAAGTCGTCAACCATTTATTTCTAGGGCCTGCCTTTCTTGCAAAGATAGCTGCCATTAATATGTCACTAACCTCGCCCTGCTTCAATCTCATCCATTCCGCCATTACTTCCACCCCAGATGCCTTTCCTTCGAAACTCGAAGTTAGAGCTTCGGGATGCTTTACATGGCCTTGTTCTGAATCCAGGAGCTCCTTTAAGGTTGTTTCTCTTCATTATTCATCGAATGTGAGCTGCCGGATTCCACTTCAGTGTTTTTCGTCCGAGGCGGCGGCTGAGACGATCGCGGCGGCGAAGGACTCTAAGGTCTTTGATACTGATTTTGAATCTCGAATAGGTGGGGATGGTGGTTTTGGAGGAGATGGAAACGGTTTTGGTGGCAGCGGCGGCGGCGGTGACGGCGGCGATGGAAATGGTGATGGCGAGGAGGAGAGGGAATTTGGACGGATATTGAAATTCGACGACGTGATCAAGGAGGCTGACGCTCGAGGAGTTAGACTTCCTGAGGATATGCTCGAGGCTGCTAAGGCAACCGGGATACGGGAAGTTTTTCTTCAGCGTTACTTGGACTTGCAGGGGTCAGGTTGGTTGTTAGGCTTCTTGATGAATTCCTGCTCCATGTTTCGTGACCGAATGCTAGCAGATCCTTCTTTTCTTTTTAAAGTCGGAACAGAGGTGGTTATAGATTCATGCTGTGCTACATTTGCTGAAGTGCAGAAAAGGGGAGAGAATTTCTGGGCAGAGTTTGAGTTATTTGCTGCTGATCTTTTAGTTGGTGTTGTGGTTGACATTGCTTTGGTTGGTATGTTAGCACCATATGCTCGTATAGGACAGCGGCCTGTATCAAGAGGTTTATTAGGACAAATGCAGCGTGCTTATTCTTCTCTTCCTAGCAGTGTTTTTGAAGCTGAAAGGCCCGGGTGTAAATTCACAGTGAAGCAGCGAATTGCATCATTTTTCTACAAGGGTGTCTTGTATGGCTCAGTGGGATTTGGATGTGGTCTCATTGGCCAGGGGATTGCTAATTTGATCATGAACACAAAACGGTGTATAAAGAAATCAGATGAGGATGTGCGTGTGCCTCCTCTCGTTCAGAGTGCCGTTCTCTGGGGTGTTTTCCTTGCGGTATCTTCCAACACTCGTTATCAAATTGTGAACGCACTCGAGCAGGTGGTCGAATTCTCGCCTTTGGCAAAGAAGATTCCACCGGTGGCAATGGCCTTCACAGTTGGTGTGAGGTTTGCCAACAACATTTATGGTGGTATGCAGTTTGTAGATTGGGCAAGATGGAGTGGTGTTCAATAAATTTAACATGCTGCATTCATTAGGTTAGGAATCTT

Coding sequence (CDS)

ATGTCACTAACCTCGCCCTGCTTCAATCTCATCCATTCCGCCATTACTTCCACCCCAGATGCCTTTCCTTCGAAACTCGAAGTTAGAGCTTCGGGATGCTTTACATGGCCTTGTTCTGAATCCAGGAGCTCCTTTAAGGTTGTTTCTCTTCATTATTCATCGAATGTGAGCTGCCGGATTCCACTTCAGTGTTTTTCGTCCGAGGCGGCGGCTGAGACGATCGCGGCGGCGAAGGACTCTAAGGTCTTTGATACTGATTTTGAATCTCGAATAGGTGGGGATGGTGGTTTTGGAGGAGATGGAAACGGTTTTGGTGGCAGCGGCGGCGGCGGTGACGGCGGCGATGGAAATGGTGATGGCGAGGAGGAGAGGGAATTTGGACGGATATTGAAATTCGACGACGTGATCAAGGAGGCTGACGCTCGAGGAGTTAGACTTCCTGAGGATATGCTCGAGGCTGCTAAGGCAACCGGGATACGGGAAGTTTTTCTTCAGCGTTACTTGGACTTGCAGGGGTCAGGTTGGTTGTTAGGCTTCTTGATGAATTCCTGCTCCATGTTTCGTGACCGAATGCTAGCAGATCCTTCTTTTCTTTTTAAAGTCGGAACAGAGGTGGTTATAGATTCATGCTGTGCTACATTTGCTGAAGTGCAGAAAAGGGGAGAGAATTTCTGGGCAGAGTTTGAGTTATTTGCTGCTGATCTTTTAGTTGGTGTTGTGGTTGACATTGCTTTGGTTGGTATGTTAGCACCATATGCTCGTATAGGACAGCGGCCTGTATCAAGAGGTTTATTAGGACAAATGCAGCGTGCTTATTCTTCTCTTCCTAGCAGTGTTTTTGAAGCTGAAAGGCCCGGGTGTAAATTCACAGTGAAGCAGCGAATTGCATCATTTTTCTACAAGGGTGTCTTGTATGGCTCAGTGGGATTTGGATGTGGTCTCATTGGCCAGGGGATTGCTAATTTGATCATGAACACAAAACGGTGTATAAAGAAATCAGATGAGGATGTGCGTGTGCCTCCTCTCGTTCAGAGTGCCGTTCTCTGGGGTGTTTTCCTTGCGGTATCTTCCAACACTCGTTATCAAATTGTGAACGCACTCGAGCAGGTGGTCGAATTCTCGCCTTTGGCAAAGAAGATTCCACCGGTGGCAATGGCCTTCACAGTTGGTGTGAGGTTTGCCAACAACATTTATGGTGGTATGCAGTTTGTAGATTGGGCAAGATGGAGTGGTGTTCAATAA

Protein sequence

MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRIPLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ

Homology

[Close]

BLAST of Carg02604 vs. NCBI nr
Match: KAG6606017.1 (Protein RETICULATA-RELATED 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035966.1 Protein RETICULATA-RELATED 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 808.9 bits (2088), Expect = 2.0e-230
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI
Sbjct: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120
           PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG
Sbjct: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120

Query: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180
           EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL
Sbjct: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180

Query: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240
           MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV
Sbjct: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240

Query: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300
           VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY
Sbjct: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300

Query: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360
           KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR
Sbjct: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360

Query: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 413

[Close]

BLAST of Carg02604 vs. NCBI nr
Match: XP_022996050.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 795.4 bits (2053), Expect = 2.3e-226
Identity = 404/413 (97.82%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MS+TSPCFNLIHSA+ S+PDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI
Sbjct: 1   MSVTSPCFNLIHSAVASSPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120
           PL+CFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGG+GGGG GGDGNGDG
Sbjct: 61  PLKCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGNGGGGGGGDGNGDG 120

Query: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180
           EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL
Sbjct: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180

Query: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240
           MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV
Sbjct: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240

Query: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300
           VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY
Sbjct: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300

Query: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360
           KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDV VPPL+QSAVLWGVFLAVSSNTR
Sbjct: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVPVPPLIQSAVLWGVFLAVSSNTR 360

Query: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 413

[Close]

BLAST of Carg02604 vs. NCBI nr
Match: XP_022958431.1 (protein RETICULATA-RELATED 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 794.7 bits (2051), Expect = 3.9e-226
Identity = 407/413 (98.55%), Postives = 408/413 (98.79%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MSLTSPCFNLIHSA+TSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI
Sbjct: 1   MSLTSPCFNLIHSAVTSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120
           PLQCFSSEAAAETIAAA DSKVFDTDFESRIGGDGGFGGDGNGFGGSGG   GGDGNGDG
Sbjct: 61  PLQCFSSEAAAETIAAANDSKVFDTDFESRIGGDGGFGGDGNGFGGSGG---GGDGNGDG 120

Query: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180
           EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL
Sbjct: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180

Query: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240
           MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV
Sbjct: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240

Query: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300
           VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY
Sbjct: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300

Query: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360
           KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDV VPPLVQSAVLWGVFLAVSSNTR
Sbjct: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVPVPPLVQSAVLWGVFLAVSSNTR 360

Query: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 410

[Close]

BLAST of Carg02604 vs. NCBI nr
Match: XP_023534638.1 (protein RETICULATA-RELATED 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 774.6 bits (1999), Expect = 4.2e-220
Identity = 398/413 (96.37%), Postives = 403/413 (97.58%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MS+TSPCFNLIHSA+TSTPDAFPSKLEVRASGCFTWP SESRSSFKVV+ HYSSNVSCRI
Sbjct: 1   MSVTSPCFNLIHSAVTSTPDAFPSKLEVRASGCFTWPSSESRSSFKVVAFHYSSNVSCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120
           PL+CFSSE      AAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGS GGGDGGDGNGDG
Sbjct: 61  PLKCFSSE------AAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGS-GGGDGGDGNGDG 120

Query: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180
           EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL
Sbjct: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180

Query: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240
           MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV
Sbjct: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240

Query: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300
           VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY
Sbjct: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300

Query: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360
           KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDV VPPL+QSAVLWGVFLAVSSNTR
Sbjct: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVPVPPLIQSAVLWGVFLAVSSNTR 360

Query: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 406

[Close]

BLAST of Carg02604 vs. NCBI nr
Match: XP_038900475.1 (protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 698.7 bits (1802), Expect = 2.9e-197
Identity = 361/415 (86.99%), Postives = 377/415 (90.84%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MS+TSP FNL HS + S PDAF S LEVRASGCF WPCSE R SFK+V+LH+SSNV+CRI
Sbjct: 1   MSVTSPTFNLFHSTVPSNPDAFFSNLEVRASGCFRWPCSEPRGSFKLVALHHSSNVNCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVF-DTDFESRIGGDGGFGGDGNGFG-GSGGGGDGGDGNG 120
            L C SSEAAAETI A +DSKVF D +  SRI  DGG GG GN FG G GGGG GGDGNG
Sbjct: 61  RLNCISSEAAAETIVAPEDSKVFDDVNSVSRIDADGGVGGGGNPFGSGGGGGGGGGDGNG 120

Query: 121 DGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLG 180
           DGE+EREFG +LK DDVIKEADARGVRLP DMLEAAKATGIREVFL RYLDLQGSGWLLG
Sbjct: 121 DGEDEREFGPLLKLDDVIKEADARGVRLPSDMLEAAKATGIREVFLHRYLDLQGSGWLLG 180

Query: 181 FLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVG 240
           FLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRG+NFW EFELFAADLLVG
Sbjct: 181 FLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGDNFWPEFELFAADLLVG 240

Query: 241 VVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASF 300
           +VVDIALVGMLAPYARIGQRPVSRGLLGQMQ AYS+LPSSVFEAERPGCKFTV+QRIAS+
Sbjct: 241 IVVDIALVGMLAPYARIGQRPVSRGLLGQMQHAYSALPSSVFEAERPGCKFTVRQRIASY 300

Query: 301 FYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSN 360
           FYKGVLYGSVGFGCGLIGQGIANLIMN KRCIKKSDEDV VPPL+QSA LWGVFLAVSSN
Sbjct: 301 FYKGVLYGSVGFGCGLIGQGIANLIMNAKRCIKKSDEDVPVPPLIQSAALWGVFLAVSSN 360

Query: 361 TRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           TRYQIVNALEQVVE SPL KKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 TRYQIVNALEQVVEASPLGKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 415

[Close]

BLAST of Carg02604 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 7.1e-130
Identity = 263/413 (63.68%), Postives = 310/413 (75.06%), Query Frame = 0


Query: 25  KLEVRASGCF-TWPCSESRSSFKVVSLHYSSNVSCR-IPLQCFSSEAAAETI-------- 84
           + E+R S CF   P  ESR       +H +S++S R +  +C  S+     I        
Sbjct: 29  RFEIR-SVCFRRSPGVESR------RIHLNSDLSSRNLRNRCVGSDVVTGEISGRSIPDW 88

Query: 85  --AAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDGE----------- 144
             +  KD  + D + E    GDGG     N  GG+GG GDGG G GDGE           
Sbjct: 89  AYSGVKDETLSDLEPELD-DGDGGDENGNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKA 148

Query: 145 EEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFLM 204
           EE+EFG ILKF++V+KE + RG+ LPEDMLEAAK+ GIR++FL RYLDLQGS W LGFLM
Sbjct: 149 EEKEFGPILKFEEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLM 208

Query: 205 NSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVVV 264
            SC+M R+RMLADPSFLFKVGTEV IDSCCATFAEVQKRGE+FW+EFEL+AADLLVG+VV
Sbjct: 209 RSCAMLRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVV 268

Query: 265 DIALVGMLAPYARIGQRPV-SRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 324
           D+ALVG+LAPYARIG+  V S GL   ++RA +SLPSSVFEAERPGCKF+V QRIA+FFY
Sbjct: 269 DVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFY 328

Query: 325 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 384
           KG+LYGSVGFGCGLIGQGIANLIM  KR +KKS+EDV +PPL +SA LWGVFL +SSN R
Sbjct: 329 KGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNAR 388

Query: 385 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQI+N LE+VVE S  AK+IP VAMAFTVGVRFANN+YGGMQFVDWA+ SGVQ
Sbjct: 389 YQIINGLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of Carg02604 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.1e-125
Identity = 235/358 (65.64%), Postives = 276/358 (77.09%), Query Frame = 0


Query: 69  AAAETIAAAKDSKVFDTDFESRIG-------------GDGGFGGDGNGFGGSGGGGDGGD 128
           AA E I    D+ +   D    +G             GDG  G DGNG GG GG G  GD
Sbjct: 75  AATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGSDGNGGGGGGGNGGEGD 134

Query: 129 GNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGW 188
           G G+  EE+EFG ILKF++V+KE +ARG  LP DMLEAAK  GIR+V L RYLDLQ S  
Sbjct: 135 GEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAG 194

Query: 189 LLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADL 248
           LLGF + S +M R+RMLADPSFLFK+G E+VIDSCCAT AEVQKRG++FWAEFEL+ ADL
Sbjct: 195 LLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADL 254

Query: 249 LVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRI 308
           LVG VV+IALVGMLAPY R GQ   S G LG+M  AY++LPSSVFEAERPGC+F+ +QR+
Sbjct: 255 LVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRL 314

Query: 309 ASFFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAV 368
           A++FYKG++YG+VGFGCG++GQGIANLIM  KR I KS+E++ VPPL++SA LWGVFL+V
Sbjct: 315 ATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSV 374

Query: 369 SSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           SSNTRYQI+N LE+VVE SP AKK PP AMAFTVGVR ANNIYGGMQFVDWAR SG Q
Sbjct: 375 SSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of Carg02604 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.6e-34
Identity = 113/358 (31.56%), Postives = 184/358 (51.40%), Query Frame = 0


Query: 66  SSEAAAETIAAAK----DSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGG--DGNGD 125
           SS ++   + +AK    + +V  T   S   G+GG   +G G  G GGGGDGG  DG+G 
Sbjct: 34  SSSSSFNGVISAKSISFNRRVPITPVLSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGH 93

Query: 126 GEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSG---WL 185
           G+E+R+  R  +   ++KE+      LP+D+  A +A  I    + R+L+LQ S    WL
Sbjct: 94  GDEDRDRNR-NEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWL 153

Query: 186 LGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLL 245
           + F       FR+R+LAD  F+ K+  E  +     T AE ++R ENF+ E E+  AD+ 
Sbjct: 154 MQF-----GGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVA 213

Query: 246 VGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIA 305
           + ++ D  LV + AP   +  RP      G + + + + P + F+    G  +T+ QR+ 
Sbjct: 214 MAIIADFMLVYLPAP--TVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLG 273

Query: 306 SFFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDE-DVRVPPLVQSAVLWGVFLAV 365
           +    G    +VG    L+G  I N  +  ++ + ++ E +V   P+V ++V +GV++AV
Sbjct: 274 AITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAV 333

Query: 366 SSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           SSN RYQIV  + +     P+  +      A    VR  N   G + +VD+AR  G+Q
Sbjct: 334 SSNLRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383

[Close]

BLAST of Carg02604 vs. ExPASy Swiss-Prot
Match: Q9SIY5 (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-23
Identity = 88/292 (30.14%), Postives = 139/292 (47.60%), Query Frame = 0


Query: 135 VIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFLMNSCSMFRDRMLAD 194
           V+  A  R   LP+D+ +      +    LQ + DL+    L+  L      FR+R+LAD
Sbjct: 417 VMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYP-LISELTQRFQGFRERLLAD 476

Query: 195 PSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVVVDIALVGMLAP--- 254
           P FL ++  E  I       A+ +KR ENF+ E +    D +   VVD   V + AP   
Sbjct: 477 PKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWLPAPTLS 536

Query: 255 ---YA--RIGQRPVS--RGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFYKGVL 314
              YA   IG   +   RGLLG       S+P + F+    G ++T+  RIAS    G+ 
Sbjct: 537 FISYADETIGPNSIDALRGLLG-------SIPDNAFQKSLGGQEWTLSLRIASVIIGGLK 596

Query: 315 YGSVGFGCGLIGQGIANLIMNTKRCIKKS---DEDVRVPPLVQSAVLWGVFLAVSSNTRY 374
              VG        G +N +   ++ IK      E  +  P++++A+++G +L  SSN RY
Sbjct: 597 LAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRY 656

Query: 375 QIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           QI+  L +      L+ + P +    +  VR AN+ +G  Q++D AR +G+Q
Sbjct: 657 QIIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Carg02604 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.3e-21
Identity = 101/324 (31.17%), Postives = 143/324 (44.14%), Query Frame = 0


Query: 93  GDGGFGGDGNGFGGSGGGGDGGDGNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLE 152
           G GG G  GN  GGSG GG GG   G G E                             E
Sbjct: 61  GGGGGGSTGNNGGGSGSGGGGGGFGGSGGEAS---------------------------E 120

Query: 153 AAKATGIREVFLQRYLDLQGSGWLLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCA 212
            +   G   +F+Q        GW            R R+ ADP F FKV  E ++     
Sbjct: 121 ESSPWGPIGLFIQ--------GW------------RSRVAADPQFPFKVLMEEIVGLSAC 180

Query: 213 TFAEVQKRGENFWAEFELFAADLLVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAY 272
              ++  R      E +   + L+VG +++  L+ MLAP A       + G    +   +
Sbjct: 181 VLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTA------ATLGSSQTLPGIF 240

Query: 273 SSLPSS-VFEAERPGCKFTVKQRIASFFYKGVLYGSVGFGCGLIGQGIAN-LIMNTKRCI 332
            + PSS +FE       FTV  R  +  YKG+++ SVG   GL+G  I+N LIM  K+  
Sbjct: 241 RNCPSSHMFEQG----SFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMD 300

Query: 333 KKSDEDVRVPPLVQSAVLWGVFLAVSSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVG 392
              +   + PP V +++ W   + VS+N RYQ +N +E +     LAK +PP+    +V 
Sbjct: 301 PSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFL-----LAKVLPPLVFKTSVI 322

Query: 393 V-RFANNIYGGMQFVDWARWSGVQ 414
           V R ANN+ GGM FV  AR +G Q
Sbjct: 361 VLRCANNVAGGMSFVLLARMTGSQ 322

[Close]

BLAST of Carg02604 vs. ExPASy TrEMBL
Match: A0A6J1K5M0 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491373 PE=3 SV=1)

HSP 1 Score: 795.4 bits (2053), Expect = 1.1e-226
Identity = 404/413 (97.82%), Postives = 410/413 (99.27%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MS+TSPCFNLIHSA+ S+PDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI
Sbjct: 1   MSVTSPCFNLIHSAVASSPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120
           PL+CFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGG+GGGG GGDGNGDG
Sbjct: 61  PLKCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGNGGGGGGGDGNGDG 120

Query: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180
           EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL
Sbjct: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180

Query: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240
           MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV
Sbjct: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240

Query: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300
           VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY
Sbjct: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300

Query: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360
           KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDV VPPL+QSAVLWGVFLAVSSNTR
Sbjct: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVPVPPLIQSAVLWGVFLAVSSNTR 360

Query: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 413

[Close]

BLAST of Carg02604 vs. ExPASy TrEMBL
Match: A0A6J1H219 (protein RETICULATA-RELATED 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111459653 PE=3 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 1.9e-226
Identity = 407/413 (98.55%), Postives = 408/413 (98.79%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MSLTSPCFNLIHSA+TSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI
Sbjct: 1   MSLTSPCFNLIHSAVTSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60

Query: 61  PLQCFSSEAAAETIAAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDG 120
           PLQCFSSEAAAETIAAA DSKVFDTDFESRIGGDGGFGGDGNGFGGSGG   GGDGNGDG
Sbjct: 61  PLQCFSSEAAAETIAAANDSKVFDTDFESRIGGDGGFGGDGNGFGGSGG---GGDGNGDG 120

Query: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180
           EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL
Sbjct: 121 EEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFL 180

Query: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240
           MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV
Sbjct: 181 MNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVV 240

Query: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300
           VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY
Sbjct: 241 VDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 300

Query: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 360
           KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDV VPPLVQSAVLWGVFLAVSSNTR
Sbjct: 301 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVPVPPLVQSAVLWGVFLAVSSNTR 360

Query: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 410

[Close]

BLAST of Carg02604 vs. ExPASy TrEMBL
Match: A0A6J1CHA0 (protein RETICULATA-RELATED 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011177 PE=3 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.3e-195
Identity = 360/421 (85.51%), Postives = 379/421 (90.02%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVVSLHYSSNVSCRI 60
           MS+ S  FNL HSA+ S PD FPS LEVRASGCF WPCSES  SFK+V+L +SS ++CR+
Sbjct: 1   MSVASSSFNLFHSAVPSNPDVFPSILEVRASGCFRWPCSESTGSFKLVALRHSSKLNCRV 60

Query: 61  PLQCFSSEAAAETIAAAKD--------SKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGD 120
            L C SSE+AAETIAA++D        SK FD + E RIGGDGG GG GN FGG GGGGD
Sbjct: 61  RLHCVSSESAAETIAASEDGRTGSAENSKSFDVNSEPRIGGDGGIGGGGNSFGG-GGGGD 120

Query: 121 GGDGNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQG 180
            G+GNGD E+EREFG ILKFDDVIKEADARGVRLP DMLEAAKATGIREVFL RYLDLQG
Sbjct: 121 -GNGNGDSEDEREFGPILKFDDVIKEADARGVRLPPDMLEAAKATGIREVFLLRYLDLQG 180

Query: 181 SGWLLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFA 240
           SGWLLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFA
Sbjct: 181 SGWLLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFA 240

Query: 241 ADLLVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVK 300
           ADLLVGVVVD+ALVGMLAPYARIGQRPVSRGLLGQMQ AYSSLPSSVFEAERPGC+FTVK
Sbjct: 241 ADLLVGVVVDVALVGMLAPYARIGQRPVSRGLLGQMQNAYSSLPSSVFEAERPGCRFTVK 300

Query: 301 QRIASFFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVF 360
           QRIAS+FYKGVLYGSVGFGCGLIGQGIANLIMN KRCIKKSDEDV VPPL+QSA LWGVF
Sbjct: 301 QRIASYFYKGVLYGSVGFGCGLIGQGIANLIMNAKRCIKKSDEDVPVPPLIQSAALWGVF 360

Query: 361 LAVSSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGV 414
           LAVSSNTRYQIVNALEQVVE SPLAKKIPPVAMAFT+GVRFANNIYGGMQFVDWARWSGV
Sbjct: 361 LAVSSNTRYQIVNALEQVVEASPLAKKIPPVAMAFTIGVRFANNIYGGMQFVDWARWSGV 419

[Close]

BLAST of Carg02604 vs. ExPASy TrEMBL
Match: A0A5D3BCI2 (Protein RETICULATA-RELATED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00110 PE=3 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.6e-195
Identity = 360/416 (86.54%), Postives = 376/416 (90.38%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVV-SLHYSSNVSCR 60
           MS+ S  FNL HS ++S PDAF S L+VRASGCF WPCSE + SFK+V SLH+SSNV+ R
Sbjct: 1   MSVASSSFNLFHSTVSSNPDAFLSNLDVRASGCFRWPCSEPKGSFKLVSSLHHSSNVNFR 60

Query: 61  IPLQCFSSE-AAAETIAAAKDSKVFD-TDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGN 120
           I L C SSE AAAETI A  DSKVFD  D E RI GDGG GG GN FGGSGGG  GGDGN
Sbjct: 61  IRLNCISSEAAAAETIVAPGDSKVFDGVDSEPRIDGDGGVGGGGNAFGGSGGG--GGDGN 120

Query: 121 GDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLL 180
           GDGE+EREFG +LKFDDVIKEADARGVRLP DMLEAAKATGIREVFL RYLDLQGSGWLL
Sbjct: 121 GDGEDEREFGPLLKFDDVIKEADARGVRLPTDMLEAAKATGIREVFLHRYLDLQGSGWLL 180

Query: 181 GFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLV 240
           GFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLV
Sbjct: 181 GFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLV 240

Query: 241 GVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIAS 300
           G+VVD+ALVGMLAPYARIGQRPVS GLLGQMQ AYSSLPSSVFEAERPGCKFTVKQRIAS
Sbjct: 241 GIVVDVALVGMLAPYARIGQRPVSSGLLGQMQHAYSSLPSSVFEAERPGCKFTVKQRIAS 300

Query: 301 FFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSS 360
           +FYKGVLYGSVGFGCGL+GQGIANLIMN KRCIKKSDEDV VPPL+QSA LWGVFLAVSS
Sbjct: 301 YFYKGVLYGSVGFGCGLVGQGIANLIMNAKRCIKKSDEDVPVPPLIQSAALWGVFLAVSS 360

Query: 361 NTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           NTRYQIVNALEQ+VE SPL KKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 NTRYQIVNALEQIVEASPLGKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414

[Close]

BLAST of Carg02604 vs. ExPASy TrEMBL
Match: A0A1S3C8G1 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497984 PE=3 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.6e-195
Identity = 360/416 (86.54%), Postives = 376/416 (90.38%), Query Frame = 0


Query: 1   MSLTSPCFNLIHSAITSTPDAFPSKLEVRASGCFTWPCSESRSSFKVV-SLHYSSNVSCR 60
           MS+ S  FNL HS ++S PDAF S L+VRASGCF WPCSE + SFK+V SLH+SSNV+ R
Sbjct: 1   MSVASSSFNLFHSTVSSNPDAFLSNLDVRASGCFRWPCSEPKGSFKLVSSLHHSSNVNFR 60

Query: 61  IPLQCFSSE-AAAETIAAAKDSKVFD-TDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGN 120
           I L C SSE AAAETI A  DSKVFD  D E RI GDGG GG GN FGGSGGG  GGDGN
Sbjct: 61  IRLNCISSEAAAAETIVAPGDSKVFDGVDSEPRIDGDGGVGGGGNAFGGSGGG--GGDGN 120

Query: 121 GDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLL 180
           GDGE+EREFG +LKFDDVIKEADARGVRLP DMLEAAKATGIREVFL RYLDLQGSGWLL
Sbjct: 121 GDGEDEREFGPLLKFDDVIKEADARGVRLPTDMLEAAKATGIREVFLHRYLDLQGSGWLL 180

Query: 181 GFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLV 240
           GFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLV
Sbjct: 181 GFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLV 240

Query: 241 GVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIAS 300
           G+VVD+ALVGMLAPYARIGQRPVS GLLGQMQ AYSSLPSSVFEAERPGCKFTVKQRIAS
Sbjct: 241 GIVVDVALVGMLAPYARIGQRPVSSGLLGQMQHAYSSLPSSVFEAERPGCKFTVKQRIAS 300

Query: 301 FFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSS 360
           +FYKGVLYGSVGFGCGL+GQGIANLIMN KRCIKKSDEDV VPPL+QSA LWGVFLAVSS
Sbjct: 301 YFYKGVLYGSVGFGCGLVGQGIANLIMNAKRCIKKSDEDVPVPPLIQSAALWGVFLAVSS 360

Query: 361 NTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           NTRYQIVNALEQ+VE SPL KKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ
Sbjct: 361 NTRYQIVNALEQIVEASPLGKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414

[Close]

BLAST of Carg02604 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 465.3 bits (1196), Expect = 5.1e-131
Identity = 263/413 (63.68%), Postives = 310/413 (75.06%), Query Frame = 0


Query: 25  KLEVRASGCF-TWPCSESRSSFKVVSLHYSSNVSCR-IPLQCFSSEAAAETI-------- 84
           + E+R S CF   P  ESR       +H +S++S R +  +C  S+     I        
Sbjct: 29  RFEIR-SVCFRRSPGVESR------RIHLNSDLSSRNLRNRCVGSDVVTGEISGRSIPDW 88

Query: 85  --AAAKDSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGGDGNGDGE----------- 144
             +  KD  + D + E    GDGG     N  GG+GG GDGG G GDGE           
Sbjct: 89  AYSGVKDETLSDLEPELD-DGDGGDENGNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKA 148

Query: 145 EEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGWLLGFLM 204
           EE+EFG ILKF++V+KE + RG+ LPEDMLEAAK+ GIR++FL RYLDLQGS W LGFLM
Sbjct: 149 EEKEFGPILKFEEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLM 208

Query: 205 NSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLLVGVVV 264
            SC+M R+RMLADPSFLFKVGTEV IDSCCATFAEVQKRGE+FW+EFEL+AADLLVG+VV
Sbjct: 209 RSCAMLRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVV 268

Query: 265 DIALVGMLAPYARIGQRPV-SRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIASFFY 324
           D+ALVG+LAPYARIG+  V S GL   ++RA +SLPSSVFEAERPGCKF+V QRIA+FFY
Sbjct: 269 DVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFY 328

Query: 325 KGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAVSSNTR 384
           KG+LYGSVGFGCGLIGQGIANLIM  KR +KKS+EDV +PPL +SA LWGVFL +SSN R
Sbjct: 329 KGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNAR 388

Query: 385 YQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           YQI+N LE+VVE S  AK+IP VAMAFTVGVRFANN+YGGMQFVDWA+ SGVQ
Sbjct: 389 YQIINGLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of Carg02604 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 449.9 bits (1156), Expect = 2.2e-126
Identity = 235/358 (65.64%), Postives = 276/358 (77.09%), Query Frame = 0


Query: 69  AAAETIAAAKDSKVFDTDFESRIG-------------GDGGFGGDGNGFGGSGGGGDGGD 128
           AA E I    D+ +   D    +G             GDG  G DGNG GG GG G  GD
Sbjct: 75  AATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGSDGNGGGGGGGNGGEGD 134

Query: 129 GNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGW 188
           G G+  EE+EFG ILKF++V+KE +ARG  LP DMLEAAK  GIR+V L RYLDLQ S  
Sbjct: 135 GEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAG 194

Query: 189 LLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADL 248
           LLGF + S +M R+RMLADPSFLFK+G E+VIDSCCAT AEVQKRG++FWAEFEL+ ADL
Sbjct: 195 LLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADL 254

Query: 249 LVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRI 308
           LVG VV+IALVGMLAPY R GQ   S G LG+M  AY++LPSSVFEAERPGC+F+ +QR+
Sbjct: 255 LVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRL 314

Query: 309 ASFFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDEDVRVPPLVQSAVLWGVFLAV 368
           A++FYKG++YG+VGFGCG++GQGIANLIM  KR I KS+E++ VPPL++SA LWGVFL+V
Sbjct: 315 ATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSV 374

Query: 369 SSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           SSNTRYQI+N LE+VVE SP AKK PP AMAFTVGVR ANNIYGGMQFVDWAR SG Q
Sbjct: 375 SSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of Carg02604 vs. TAIR 10
Match: AT2G37860.2 (Protein of unknown function (DUF3411) )

HSP 1 Score: 316.2 bits (809), Expect = 3.8e-86
Identity = 170/273 (62.27%), Postives = 203/273 (74.36%), Query Frame = 0


Query: 69  AAAETIAAAKDSKVFDTDFESRIG-------------GDGGFGGDGNGFGGSGGGGDGGD 128
           AA E I    D+ +   D    +G             GDG  G DGNG GG GG G  GD
Sbjct: 75  AATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGSDGNGGGGGGGNGGEGD 134

Query: 129 GNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGW 188
           G G+  EE+EFG ILKF++V+KE +ARG  LP DMLEAAK  GIR+V L RYLDLQ S  
Sbjct: 135 GEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAG 194

Query: 189 LLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADL 248
           LLGF + S +M R+RMLADPSFLFK+G E+VIDSCCAT AEVQKRG++FWAEFEL+ ADL
Sbjct: 195 LLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADL 254

Query: 249 LVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRI 308
           LVG VV+IALVGMLAPY R GQ   S G LG+M  AY++LPSSVFEAERPGC+F+ +QR+
Sbjct: 255 LVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRL 314

Query: 309 ASFFYKGVLYGSVGFGCGLIGQGIANLIMNTKR 329
           A++FYKG++YG+VGFGCG++GQGIANLIM  KR
Sbjct: 315 ATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of Carg02604 vs. TAIR 10
Match: AT2G37860.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 316.2 bits (809), Expect = 3.8e-86
Identity = 170/273 (62.27%), Postives = 203/273 (74.36%), Query Frame = 0


Query: 69  AAAETIAAAKDSKVFDTDFESRIG-------------GDGGFGGDGNGFGGSGGGGDGGD 128
           AA E I    D+ +   D    +G             GDG  G DGNG GG GG G  GD
Sbjct: 75  AATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGSDGNGGGGGGGNGGEGD 134

Query: 129 GNGDGEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSGW 188
           G G+  EE+EFG ILKF++V+KE +ARG  LP DMLEAAK  GIR+V L RYLDLQ S  
Sbjct: 135 GEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAG 194

Query: 189 LLGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADL 248
           LLGF + S +M R+RMLADPSFLFK+G E+VIDSCCAT AEVQKRG++FWAEFEL+ ADL
Sbjct: 195 LLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADL 254

Query: 249 LVGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRI 308
           LVG VV+IALVGMLAPY R GQ   S G LG+M  AY++LPSSVFEAERPGC+F+ +QR+
Sbjct: 255 LVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRL 314

Query: 309 ASFFYKGVLYGSVGFGCGLIGQGIANLIMNTKR 329
           A++FYKG++YG+VGFGCG++GQGIANLIM  KR
Sbjct: 315 ATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of Carg02604 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 146.0 bits (367), Expect = 6.8e-35
Identity = 113/358 (31.56%), Postives = 184/358 (51.40%), Query Frame = 0


Query: 66  SSEAAAETIAAAK----DSKVFDTDFESRIGGDGGFGGDGNGFGGSGGGGDGG--DGNGD 125
           SS ++   + +AK    + +V  T   S   G+GG   +G G  G GGGGDGG  DG+G 
Sbjct: 34  SSSSSFNGVISAKSISFNRRVPITPVLSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGH 93

Query: 126 GEEEREFGRILKFDDVIKEADARGVRLPEDMLEAAKATGIREVFLQRYLDLQGSG---WL 185
           G+E+R+  R  +   ++KE+      LP+D+  A +A  I    + R+L+LQ S    WL
Sbjct: 94  GDEDRDRNR-NEAMLLLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWL 153

Query: 186 LGFLMNSCSMFRDRMLADPSFLFKVGTEVVIDSCCATFAEVQKRGENFWAEFELFAADLL 245
           + F       FR+R+LAD  F+ K+  E  +     T AE ++R ENF+ E E+  AD+ 
Sbjct: 154 MQF-----GGFRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVA 213

Query: 246 VGVVVDIALVGMLAPYARIGQRPVSRGLLGQMQRAYSSLPSSVFEAERPGCKFTVKQRIA 305
           + ++ D  LV + AP   +  RP      G + + + + P + F+    G  +T+ QR+ 
Sbjct: 214 MAIIADFMLVYLPAP--TVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLG 273

Query: 306 SFFYKGVLYGSVGFGCGLIGQGIANLIMNTKRCIKKSDE-DVRVPPLVQSAVLWGVFLAV 365
           +    G    +VG    L+G  I N  +  ++ + ++ E +V   P+V ++V +GV++AV
Sbjct: 274 AITRNGAKLFAVGTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAV 333

Query: 366 SSNTRYQIVNALEQVVEFSPLAKKIPPVAMAFTVGVRFANNIYGGMQFVDWARWSGVQ 414
           SSN RYQIV  + +     P+  +      A    VR  N   G + +VD+AR  G+Q
Sbjct: 334 SSNLRYQIVAGVIEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQ 383

The following BLAST results are available for this feature:

BLAST of Carg02604 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606017.1	2.0e-230	100.00	Protein RETICULATA-RELATED 1, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_022996050.1	2.3e-226	97.82	protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima]	[more]
XP_022958431.1	3.9e-226	98.55	protein RETICULATA-RELATED 1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023534638.1	4.2e-220	96.37	protein RETICULATA-RELATED 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_038900475.1	2.9e-197	86.99	protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida]	[more]

BLAST of Carg02604 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGP9	7.1e-130	63.68	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	3.1e-125	65.64	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q94CJ5	9.6e-34	31.56	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9SIY5	2.0e-23	30.14	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z2	9.3e-21	31.17	Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of Carg02604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5M0	1.1e-226	97.82	protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H219	1.9e-226	98.55	protein RETICULATA-RELATED 1, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1CHA0	1.3e-195	85.51	protein RETICULATA-RELATED 1, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5D3BCI2	8.6e-195	86.54	Protein RETICULATA-RELATED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C8G1	8.6e-195	86.54	protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497...	[more]

BLAST of Carg02604 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22790.1	5.1e-131	63.68	reticulata-related 1	[more]
AT2G37860.3	2.2e-126	65.64	Protein of unknown function (DUF3411)	[more]
AT2G37860.2	3.8e-86	62.27	Protein of unknown function (DUF3411)	[more]
AT2G37860.1	3.8e-86	62.27	Protein of unknown function (DUF3411)	[more]
AT5G12470.1	6.8e-35	31.56	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 189..365 e-value: 1.3E-64 score: 217.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..121
None	No IPR available	PANTHER	PTHR31038:SF18	PROTEIN RETICULATA-RELATED 1, CHLOROPLASTIC	coord: 63..413
None	No IPR available	PANTHER	PTHR31038	EXPRESSED PROTEIN-RELATED	coord: 63..413

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02604-RA	Carg02604-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane