Carg02601 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02601
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondria isoform 1
Location	Carg_Chr02: 7870823 .. 7873448 (+)
RNA-Seq Expression	Carg02601
Synteny	Carg02601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGGAGCAATCCGTTCCCGCGGTTTGCAGAGATTGACCGTACAGTTTTCCGATTAGGGTTCAACAGAGAGTGTGAAGACGATACCGTGAGAGAATCCGAATCGATCACAGACATGTTTGGGTTGAAGCGATTAGTTCCTCATACTTGCTCGATTCGAGCTTCTTTAACAATGCAGCTCTCTGGTTACCAGGAAAAATTGCTTGTTTTTCCTTCGCAGCACTTAGCTCAGCTGACTTCCAATCGCTTTCTCGACATTTATCAGGTACCTTGATTACTTTTCTGAGCTTCCATTAGGTTTTGAGAATATGAAACGAAATTTATTTAACAAAAATGTTGGATATTTTGACTTTTTTTTTTCTTTGGTTGCTCTTTCGACGAAGAATTTTACTATTTTTGTTGTTGAAAGATAATTGTACATGACCGAGAACATCTGACGTGAATTTATTAAATGATTGCTTAGTTCCGTTTCTTAGAACTGGTTGAAAATACCCGTTCATGCCTGTTATATGTTTTAGATTCTTCTTGATGCAGTTATTCGAATAAGTTAAGGGGTAATATGTGTGTGTCGTATTGAGATTTTTTTTTTTACCGATGTTTGCAGCTTGGAAACAAAACAGCCATTGAGAAAGAGCGCGCTCGACTGTAAGTTGCATTACAAAGCTGTAGGCAATTGATTAACTGACACCAAAAATTATCAAGAAGCTTTGTTGATTTAAATTGCGACAGTGCAGATGAAATAAACAGAGGATACTTTGCTGATATTGCAGAGCTTAAGCAACATGGTGGAAAGGTAATATATTAGTTTTGATGACAAGTCGGGTTAAATTTTAAATGGTAGTGTAAGGTTTCTTTCTCGAATTTTATTTAATTAAAGCCGAGTTTGAAGATTGCAGCAGCTAACAAGATTCTGATTCCGGCTATGGCTGCTGTAAAATTTCCCGAGTTTGAAGTGAGCTATTCTGATGGTAAATCGTTGAAGCTACCCATTAAATTCGATGCTAATGAGGTTGAAGGCAACAGTTTGGCATCGGCCTTGCCTTTGGCCACATTACTGTGTCTTTCTTTCAGAGCAAGCTCCCAGGTACATTTTGGTTTTGTTATCACCGGTTTGTTGGTTGACATGGATACAACATGGGAAAGTTTATAATAATCTTTAATATGATGACAATATTGTATCATCAATTAGGATTTAGAAGTGTCCTTTGCCATTCCCAATTCTTATTTCTCTACAAGAAATTTGAATTTTCAGTTATCTGGAAAATGGATAAAATACAATTATATATACACTGTGATCTTTTGTCATGTCCGGAAGGATCCTGAAAACTTTTAAATCAAATGGCCTACGTATCTCTGTGATCTTTTGGGATAAGCTATACTATATTCTGGATTAGTGGCTAACAACATTTGGATCGGTGGCTTTAAAGATGTTAGTTTGAATTAAAGCTTTCTTCATTGCGTCGATCAGTGTCAATCCAAGTGGTTGGATGCTACATATTTAATGAGTTAATGTAAAAAAGCAGAGTTAATTGCCTTCTTTTACTTTATTTTGTTAGGAGAAACGTTGTCTCACTGATAAGAAGTGGTATTGCCCCTTTTTCTTTGTCTAATAGCGTTGGAGTTTCAGAATTTCAAATAAAATTGTCCTGAAATAAACTACTTCAATGCACTAAAATAAGCTAGCCAACTTCGTATTCAAATTTTGATGCTGTTTGGGAATGGTATTAAAAAGTTCTCAATTCTTTTAGGACTGATATCTGTTCCTTATTATTAACTTATTTAGACAGTCAAAACTTTGAATGTTGTTTTAGCTGAGTTGTGCTCAAACATTCTTTGATTTAAGAAGAGTCTTCAAGTATTCTTTAGAATAATAAATCAAATAAAATAAAGGCTATGCAGCACAATACTCAACAATGAAGTATTCTCTTTTAGCCCATTATAAATCTGTTTAAAAGAACTTTTCTCTTGGAAGTACATCCAAATGATACTTTGCTTTCCATACATTCACTTCCTTTGGAGGAGCAATTGAGTTAGACAGGCATGCTTGCAAATCATTAAATTGATCAAGAAAAGATGTATGTTGGCATCATCATCATATCTTCCTTTTACCTTTGCAGGCCATGATTAATTCTTGGAGTGCCCCTTTTCTTGATGCCTTTTCGAGTTCAAAGAATGTCCAGTTATACGAGGTAACGTAATTCCATAACTAATTATATTTGGTCCCGCGGTTGATTTTGTTTATCAATTCCTCAAACCATACGTAATGACCATTTTCTGTTGCAATTTAAAAATTTAGAAACTTCGGCATTCTAATCAGAATGCAGATGCTATTCTATGTGTGTATAAACTGAATTCGTAATGTTATGGTTCTGTTAACAGCATTTAAAATTTTCACTTGCAAGGTTTCATTTATAGACTCGTGGTTGTTATGTCGGAACCCAATTAAGAAAGTGCTTCTTCGGCTGATGAGGAAATCCAGTGACAATGCACAGAATGACTCACTTCAAAGGAAGATTGTATACTCGTTTGGCGACCATTATTACTTCAGAAAGGAGCTCAAAATACTAAATCTTCTCTCTGGGTATGAGTTTATTTCATTTCCTTGCCTTCCTTTCCGTTTTCCTTAG

mRNA sequence

CTCAGGAGCAATCCGTTCCCGCGGTTTGCAGAGATTGACCGTACAGTTTTCCGATTAGGGTTCAACAGAGAGTGTGAAGACGATACCGTGAGAGAATCCGAATCGATCACAGACATGTTTGGGTTGAAGCGATTAGTTCCTCATACTTGCTCGATTCGAGCTTCTTTAACAATGCAGCTCTCTGGTTACCAGGAAAAATTGCTTGTTTTTCCTTCGCAGCACTTAGCTCAGCTGACTTCCAATCGCTTTCTCGACATTTATCAGCTTGGAAACAAAACAGCCATTGAGAAAGAGCGCGCTCGACTTGCAGATGAAATAAACAGAGGATACTTTGCTGATATTGCAGAGCTTAAGCAACATGGTGGAAAGATTGCAGCAGCTAACAAGATTCTGATTCCGGCTATGGCTGCTGTAAAATTTCCCGAGTTTGAAGTGAGCTATTCTGATGGTAAATCGTTGAAGCTACCCATTAAATTCGATGCTAATGAGGTTGAAGGCAACAGTTTGGCATCGGCCTTGCCTTTGGCCACATTACTGTGTCTTTCTTTCAGAGCAAGCTCCCAGGCCATGATTAATTCTTGGAGTGCCCCTTTTCTTGATGCCTTTTCGAGTTCAAAGAATGTCCAGTTATACGAGGTTTCATTTATAGACTCGTGGTTGTTATGTCGGAACCCAATTAAGAAAGTGCTTCTTCGGCTGATGAGGAAATCCAGTGACAATGCACAGAATGACTCACTTCAAAGGAAGATTGTATACTCGTTTGGCGACCATTATTACTTCAGAAAGGAGCTCAAAATACTAAATCTTCTCTCTGGGTATGAGTTTATTTCATTTCCTTGCCTTCCTTTCCGTTTTCCTTAG

Coding sequence (CDS)

ATGTTTGGGTTGAAGCGATTAGTTCCTCATACTTGCTCGATTCGAGCTTCTTTAACAATGCAGCTCTCTGGTTACCAGGAAAAATTGCTTGTTTTTCCTTCGCAGCACTTAGCTCAGCTGACTTCCAATCGCTTTCTCGACATTTATCAGCTTGGAAACAAAACAGCCATTGAGAAAGAGCGCGCTCGACTTGCAGATGAAATAAACAGAGGATACTTTGCTGATATTGCAGAGCTTAAGCAACATGGTGGAAAGATTGCAGCAGCTAACAAGATTCTGATTCCGGCTATGGCTGCTGTAAAATTTCCCGAGTTTGAAGTGAGCTATTCTGATGGTAAATCGTTGAAGCTACCCATTAAATTCGATGCTAATGAGGTTGAAGGCAACAGTTTGGCATCGGCCTTGCCTTTGGCCACATTACTGTGTCTTTCTTTCAGAGCAAGCTCCCAGGCCATGATTAATTCTTGGAGTGCCCCTTTTCTTGATGCCTTTTCGAGTTCAAAGAATGTCCAGTTATACGAGGTTTCATTTATAGACTCGTGGTTGTTATGTCGGAACCCAATTAAGAAAGTGCTTCTTCGGCTGATGAGGAAATCCAGTGACAATGCACAGAATGACTCACTTCAAAGGAAGATTGTATACTCGTTTGGCGACCATTATTACTTCAGAAAGGAGCTCAAAATACTAAATCTTCTCTCTGGGTATGAGTTTATTTCATTTCCTTGCCTTCCTTTCCGTTTTCCTTAG

Protein sequence

MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKERARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFISFPCLPFRFP

Homology

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BLAST of Carg02601 vs. NCBI nr
Match: KAG7035969.1 (hypothetical protein SDJN02_02769 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.8 bits (1257), Expect = 2.8e-134
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS
Sbjct: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFISF 240
           WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFISF
Sbjct: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFISF 240

Query: 241 PCLPFRFP 249
           PCLPFRFP
Sbjct: 241 PCLPFRFP 248

[Close]

BLAST of Carg02601 vs. NCBI nr
Match: XP_022958438.1 (uncharacterized protein LOC111459659 [Cucurbita moschata])

HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHTCSIR SLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHTCSIRTSLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS
Sbjct: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGY F+
Sbjct: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYIFL 238

[Close]

BLAST of Carg02601 vs. NCBI nr
Match: XP_022995314.1 (uncharacterized protein LOC111490897 [Cucurbita maxima])

HSP 1 Score: 444.1 bits (1141), Expect = 7.8e-121
Identity = 226/238 (94.96%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIRASL MQLSGYQEK LVFPSQHLAQLTSNRFL+IYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLRMQLSGYQEKFLVFPSQHLAQLTSNRFLNIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDANEVEGN+ ASALP+ATLLCLSFRASSQAMINSWS PFLDAFSSSKN+QLYEVSFIDS
Sbjct: 121 FDANEVEGNNSASALPVATLLCLSFRASSQAMINSWSTPFLDAFSSSKNIQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           WLLCRNPIKKVLLRLMRKSSDNAQ DSLQRKIVYSFGDHYYFRKELKILNLLSGY F+
Sbjct: 181 WLLCRNPIKKVLLRLMRKSSDNAQIDSLQRKIVYSFGDHYYFRKELKILNLLSGYIFL 238

[Close]

BLAST of Carg02601 vs. NCBI nr
Match: XP_023532866.1 (uncharacterized protein LOC111794906 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-120
Identity = 224/238 (94.12%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIRASLTMQLSGYQEK LVFPS HLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSGYQEKFLVFPSLHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADE+NRGYFAD+AELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK
Sbjct: 61  RARLADEMNRGYFADLAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDANEVEGN+ ASALP+ATLLCLSFR SSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS
Sbjct: 121 FDANEVEGNNSASALPVATLLCLSFRESSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           WLLCRNPIKK+LLRLMRKSSDNA NDSLQRKIVYSFGDHYYFRKELKI+NLLSGY F+
Sbjct: 181 WLLCRNPIKKLLLRLMRKSSDNALNDSLQRKIVYSFGDHYYFRKELKIINLLSGYIFL 238

[Close]

BLAST of Carg02601 vs. NCBI nr
Match: KAG6606019.1 (GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.6e-113
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 22  LSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKERARLADEINRGYFADIAELKQ 81
           LSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKERARLADEINRGYFADIAELKQ
Sbjct: 233 LSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKERARLADEINRGYFADIAELKQ 292

Query: 82  HGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNSLASALPLATLL 141
           HGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNSLASALPLATLL
Sbjct: 293 HGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNSLASALPLATLL 352

Query: 142 CLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKVLLRLMRKSSD 201
           CLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKVLLRLMRKSSD
Sbjct: 353 CLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKVLLRLMRKSSD 412

Query: 202 NAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           NAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGY F+
Sbjct: 413 NAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYIFL 449

[Close]

BLAST of Carg02601 vs. ExPASy TrEMBL
Match: A0A6J1H332 (uncharacterized protein LOC111459659 OS=Cucurbita moschata OX=3662 GN=LOC111459659 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 5.1e-126
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPHTCSIR SLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHTCSIRTSLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS
Sbjct: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGY F+
Sbjct: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYIFL 238

[Close]

BLAST of Carg02601 vs. ExPASy TrEMBL
Match: A0A6J1K5D3 (uncharacterized protein LOC111490897 OS=Cucurbita maxima OX=3661 GN=LOC111490897 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.8e-121
Identity = 226/238 (94.96%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIRASL MQLSGYQEK LVFPSQHLAQLTSNRFL+IYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLRMQLSGYQEKFLVFPSQHLAQLTSNRFLNIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK
Sbjct: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDANEVEGN+ ASALP+ATLLCLSFRASSQAMINSWS PFLDAFSSSKN+QLYEVSFIDS
Sbjct: 121 FDANEVEGNNSASALPVATLLCLSFRASSQAMINSWSTPFLDAFSSSKNIQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           WLLCRNPIKKVLLRLMRKSSDNAQ DSLQRKIVYSFGDHYYFRKELKILNLLSGY F+
Sbjct: 181 WLLCRNPIKKVLLRLMRKSSDNAQIDSLQRKIVYSFGDHYYFRKELKILNLLSGYIFL 238

[Close]

BLAST of Carg02601 vs. ExPASy TrEMBL
Match: A0A6J1CG05 (uncharacterized protein LOC111011334 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011334 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.6e-114
Identity = 211/238 (88.66%), Postives = 226/238 (94.96%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRL+PH CSIRASLTMQLSGYQEK LVFPSQHL+ L SNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLIPHACSIRASLTMQLSGYQEKFLVFPSQHLSHLISNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADE+NRGYFADI+ELKQHGGKIAAANKILIPA+AAVKFP+FEVSYSD K+LKLP+K
Sbjct: 61  RARLADEMNRGYFADISELKQHGGKIAAANKILIPAVAAVKFPDFEVSYSDAKTLKLPVK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
           FDAN VE NS  SALP+ATLLCLSFRASSQ MI+SWSAPFLDAFSSSKNVQLYEVSFIDS
Sbjct: 121 FDANVVEANS--SALPVATLLCLSFRASSQPMIDSWSAPFLDAFSSSKNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           W LCRNPIK+VLLRLMRKSSDNAQNDSLQR++VYSFGDHYYFRKELKILNLL+GY F+
Sbjct: 181 WFLCRNPIKRVLLRLMRKSSDNAQNDSLQRQVVYSFGDHYYFRKELKILNLLTGYIFL 236

[Close]

BLAST of Carg02601 vs. ExPASy TrEMBL
Match: A0A0A0KGL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149420 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.9e-113
Identity = 210/238 (88.24%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIRASLTMQLS Y++K LVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSVYEDKFLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFAD++ELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGK+LKLPIK
Sbjct: 61  RARLADEINRGYFADMSELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKTLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
            D N +EGNS  S LP+ATLLCLSFRA+SQAMI+SWSA FL+AFSSS NVQLYEVSFIDS
Sbjct: 121 SDVNVIEGNSSPSGLPMATLLCLSFRANSQAMIDSWSASFLNAFSSSNNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           W LCRNPIKK+LLRLMRKSS NAQNDSLQR+IVYSFGDHYYFRKELKILNLL+GY F+
Sbjct: 181 WFLCRNPIKKLLLRLMRKSSGNAQNDSLQRQIVYSFGDHYYFRKELKILNLLTGYVFL 238

[Close]

BLAST of Carg02601 vs. ExPASy TrEMBL
Match: A0A1S3C8Y6 (uncharacterized protein LOC103497992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497992 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.5e-112
Identity = 210/238 (88.24%), Postives = 224/238 (94.12%), Query Frame = 0


Query: 1   MFGLKRLVPHTCSIRASLTMQLSGYQEKLLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60
           MFGLKRLVPH CSIRASLTMQLS Y+EK LVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE
Sbjct: 1   MFGLKRLVPHACSIRASLTMQLSVYEEKFLVFPSQHLAQLTSNRFLDIYQLGNKTAIEKE 60

Query: 61  RARLADEINRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIK 120
           RARLADEINRGYFAD++ELK+HGGKIAAANKILIPAMAAVKFPEFEVSYSDGK+LKLPIK
Sbjct: 61  RARLADEINRGYFADMSELKKHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKTLKLPIK 120

Query: 121 FDANEVEGNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDS 180
            D N VEGNS  S LP+ATLLCLSFRA+SQAMI+SWSA FL+AFSSS NVQLYEVSFIDS
Sbjct: 121 SDVNVVEGNSSPSGLPIATLLCLSFRANSQAMIDSWSASFLNAFSSSNNVQLYEVSFIDS 180

Query: 181 WLLCRNPIKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGYEFI 239
           W LCR+PIKK+LLRLMRKSS NAQNDSLQR+IVYSFGDHYYFRKELKILNLL+GY F+
Sbjct: 181 WFLCRSPIKKLLLRLMRKSSGNAQNDSLQRQIVYSFGDHYYFRKELKILNLLTGYIFL 238

[Close]

BLAST of Carg02601 vs. TAIR 10
Match: AT1G08220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). )

HSP 1 Score: 245.4 bits (625), Expect = 5.0e-65
Identity = 125/204 (61.27%), Postives = 164/204 (80.39%), Query Frame = 0


Query: 33  PSQHLA-QLTSNRFLDIYQLGNKTAIEKERARLADEINRGYFADIAELKQHGGKIAAANK 92
           PSQ  A + T+  FLD Y+ GNK AIE ERARL DE+NRGYFAD+ E K+HGGKIAAANK
Sbjct: 37  PSQMPALRSTTRSFLDFYKFGNKKAIEDERARLNDEMNRGYFADMKEFKEHGGKIAAANK 96

Query: 93  ILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVEGNSLASALPLATLLCLSFRASSQA 152
            +IPA +A+KFP   V++S+GKSLKLPI  ++NEV+  SL   +P  +L+CLSFRASSQ 
Sbjct: 97  TIIPAASAIKFPVLAVTFSNGKSLKLPIAPNSNEVDTESL--VVPKVSLVCLSFRASSQE 156

Query: 153 MINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNPIKKVLLRLMRKSSDNAQNDSLQRK 212
           MI+SWS PFL++F + K++QL+EVSFID WLL   PI+K+LLR+++K ++N +N  LQR+
Sbjct: 157 MISSWSKPFLESFGNRKDLQLFEVSFIDKWLLGLAPIRKLLLRVLQKPNNN-ENSVLQRQ 216

Query: 213 IVYSFGDHYYFRKELKILNLLSGY 236
           + Y+FGDHYYFRKE+K+LNLL+GY
Sbjct: 217 VGYAFGDHYYFRKEIKVLNLLTGY 237

[Close]

BLAST of Carg02601 vs. TAIR 10
Match: AT1G08220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 152 Blast hits to 152 proteins in 76 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 92; Plants - 30; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). )

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-54
Identity = 103/168 (61.31%), Postives = 139/168 (82.74%), Query Frame = 0


Query: 68  INRGYFADIAELKQHGGKIAAANKILIPAMAAVKFPEFEVSYSDGKSLKLPIKFDANEVE 127
           +NRGYFAD+ E K+HGGKIAAANK +IPA +A+KFP   V++S+GKSLKLPI  ++NEV+
Sbjct: 1   MNRGYFADMKEFKEHGGKIAAANKTIIPAASAIKFPVLAVTFSNGKSLKLPIAPNSNEVD 60

Query: 128 GNSLASALPLATLLCLSFRASSQAMINSWSAPFLDAFSSSKNVQLYEVSFIDSWLLCRNP 187
             SL   +P  +L+CLSFRASSQ MI+SWS PFL++F + K++QL+EVSFID WLL   P
Sbjct: 61  TESL--VVPKVSLVCLSFRASSQEMISSWSKPFLESFGNRKDLQLFEVSFIDKWLLGLAP 120

Query: 188 IKKVLLRLMRKSSDNAQNDSLQRKIVYSFGDHYYFRKELKILNLLSGY 236
           I+K+LLR+++K ++N +N  LQR++ Y+FGDHYYFRKE+K+LNLL+GY
Sbjct: 121 IRKLLLRVLQKPNNN-ENSVLQRQVGYAFGDHYYFRKEIKVLNLLTGY 165

The following BLAST results are available for this feature:

BLAST of Carg02601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035969.1	2.8e-134	100.00	hypothetical protein SDJN02_02769 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022958438.1	1.1e-125	98.74	uncharacterized protein LOC111459659 [Cucurbita moschata]	[more]
XP_022995314.1	7.8e-121	94.96	uncharacterized protein LOC111490897 [Cucurbita maxima]	[more]
XP_023532866.1	2.3e-120	94.12	uncharacterized protein LOC111794906 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6606019.1	1.6e-113	99.08	GDSL esterase/lipase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg02601 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H332	5.1e-126	98.74	uncharacterized protein LOC111459659 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1K5D3	3.8e-121	94.96	uncharacterized protein LOC111490897 OS=Cucurbita maxima OX=3661 GN=LOC111490897...	[more]
A0A6J1CG05	7.6e-114	88.66	uncharacterized protein LOC111011334 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0KGL5	4.9e-113	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149420 PE=4 SV=1	[more]
A0A1S3C8Y6	2.5e-112	88.24	uncharacterized protein LOC103497992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg02601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08220.1	5.0e-65	61.27	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-tran...	[more]
AT1G08220.2	1.8e-54	61.31	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-tran...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007849	ATPase assembly factor ATP10	PFAM	PF05176	ATP-synt_10	coord: 39..236 e-value: 1.1E-21 score: 77.2
IPR007849	ATPase assembly factor ATP10	PANTHER	PTHR28106	MITOCHONDRIAL ATPASE COMPLEX SUBUNIT ATP10	coord: 26..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02601-RA	Carg02601-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033615	mitochondrial proton-transporting ATP synthase complex assembly
cellular_component	GO:0032592	integral component of mitochondrial membrane
cellular_component	GO:0005743	mitochondrial inner membrane