Carg02399 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02399
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rhomboid-like protein 19
Location	Carg_Chr15: 2168762 .. 2172997 (-)
RNA-Seq Expression	Carg02399
Synteny	Carg02399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATCTCTACGTTTCGACCCACTCTCTCTTTAACCCAGAAGTCTCAGGCGAAGCAAAACAATCCATTTTGATCCCGCAACTCCGATCACCGTCGTCCACTGTCCACCGTCTCCGCTCATGAGTACTCCAGCAGTTCCGGGGGTAATCTCTGATACAATTGTTTGCTTTTAATCTCTTCTTAAATGGTGGTCTATTAGTCGCATTCAGATCTCGTAGTTCGTCTTTTTTTATCTTCTAATGTGCATGCCAGATCTTTGACATTGTCTCGAAATTCAGCGACGTTTCCATTGATTTTTTTTCTTGTTTTGTTTTGTATTTGGACAGAGCTCTGGTTTTTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCCGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGCTGTTAACTATCTTGCTCTTATTCCATCCAGGTATCTTTTTTGGAGAATTTAGTTTTTGAATTAGTTGTAATGAAAACTGTGCGAAGATGATGACTTCATAGCCGAATCTATGCGATGCGTACGTTCTTGTAGTAATGCCAGTAGGTTTCCGATTAGAAATGACTTCGTTTTATCGAGTTGAAATTTAGTTTGGAAAGAGTCTAGAATCTTGTGATCACTTCGATTGTGAGTGAATTATTGTGATCTAGAGGCTTGTCTTGTGGGATTGATGGAAGTTGGTCAATAGTTTAGTTGCATTGCTTGGAAATGTTGTCATAATTGCAATGATTCTGTCGATTCCACTATTTAATTTATTGGCCATATCATCCATGTACCGTTCTGCTCTTCTTCTGAATAGAATGCCTATGTTGATAGGAAATAGCAACAGACCATCTGAGAGGCTACGCAATCTACTGGTTTAGGGTGCCAATGGTTGTGTTGCAGGGGCCTGAGTGTATTATTTAGATATATAGTGCTCTTTTCATTTTTTTTGTAGTGAAGAATCCAAAGATGTTATTACCTCCATGTTGCCAGATGTTTCACTGCTAACCAATCTGAATTATGAACTCTGCTGAATAATTAGAGGAAGCATCCCCACCTGAGTGTGAAATGTGAATCCCTTACCATTCTGAATTGGCTTAATTTCCTGATAGGGAAAAAGAAATTAAGTGAAAATGTAGAGAAAGATATCCTCTGTTAGAGAAGGAAATTAGAGAAAAAATCAAGCCATCTAGAGGGAAAATGTATAAAAATGAGCCCAAAATCTGAATGTTCACACTCTTGGACCAGCAAGAGGTATAATATAAATATTTTTTCTCTGAAATTTATCCATCTTAATATTTTTGTTAGAAAATAAAAGTCTTCCTTTCCTACCCAACTACTCAACGAAGAGCTGAAACTGCATGCATTTAATATGACCTTGATCTTTGACATCTTCTGAAATCATTCTAATTATTAGAGAATTCACATCCCTTAGGGAAACCTAACAAATATTTAATTTTAAAGTAAGTCAAACAACCGTGAATTTGCTACAAAAATCAAAATGGAGAAAAGTATCACGTACCAAAGAGTCGAAGGCCCATTAATTTAGGCAAAATATGATGACTGGTGTGATAATATAGGCAATGAAATCTCGATCAACTGAAAGTCTTGAATTCTTGTCACTAGTGGACATACATTTAAACACTTAATAGATTAGTTGTGATACTTGCCTATCCTATTACAAACTTACGATGCAGAGATCATGATGCATTCCACGTAGGAAGCTTCCCTTGCGACTGAATTTGGGAGTGAAAAGTTTATAGCTCTTTCTCATTGCCTATTCATCTAAATATCAAAATTGTCGTTATCTTTCAGTATTCTATCAACATTTTTCATTGCTCCCTTCTTACATTTAGAGTTATCAAGATAGCTCTATTAAATCTCTGACTCTTGACTATATCAATAAAATTATTTATCTAATGTAGAAATATGTACCCATTTCAATTAATTAGTTTGTTTTATTTGTATGAGGTTAAAATATTTCCTCTGTAGTATAGGAATTGATTAAGTTCAGAGATGGCCTTAATATCTGATCAACTATTGAGTTGTTCAATTCAAACGGAAAGCGTGTAAGCTATAAATGGTTGGGTTATTCATTCCTTTGAACTACTATTTTGTAGGACAATACCTTTTGCCTGGAATCTCTTAACTGCTGGTTATGTTGAACAGTCAGTGTCTGGGGTATGCACTCACATTTTCACACACTATATTTTGTTCCATTTACAATAACAATTAGAATTTATCTCACTATTTTAAGTGAGTCTCCACTAGAAGTTCGACTCATTAAGAGCCATATATTGCAGGTTGTTGTCAGCACAGTTGGTCTTCTTTTTGTTGGGAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAGTTCATCTTTATAGTCAATTTTCTAACTTCTTTATGTGTTTTTATCACAGCGATTGCCCTGTACTATATTACGCAGGAGGAAATTTATCTGTAAGTGCTACTGAGTCCTCGTGCATCAGTGGCACCATTTAGGCGTACATGTGTTCATATCTTTAGTTGATAGATCATTCTGCGGGTTTCATCACTTAAGGCTGTTTTAATCCAATTTGATTTTCGTTTAAATTAATTTTGTCTGATTCATTCCCTTTATCAAGTCCTTTTTAAGCATGTTTCGTGTCTGTTTTGCCTCTCAGGCTTTCCAGACATCTTATTTACATCTTTGTGTGGTCTCAGTTATTTCCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTACCTGTACTGAAACTAAGAGCTAAGGTATGAAATATGTAGTTAGGTATATCCATATTTCAAATAATTTTTATCAGAGTTTTATTTGAACCTCATCTGATCTTTTGCTTCCAATTTCATGCAGTGGTTACCGTCTCTTGCTGTATTTGTATCCATTGCTGTATGCTTTTGGACAACTGGGGCAGCAACATATCTTCCAACAATAATATTTGGGGCATACATCAGTTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGTATACTGTTTTATTTTGAAGCCTTTTCTATTTTTAAGCTTCTCTTTCCCATGTTTCAGGAATATTCTGTGTTCTCTCTCTCCATATTCCATACTGTACTCTCAGTCTTGATGGTTTTGTGCAGGCCAGTCATTGATCCAGTTGCATCAGTATTTCATCGTCTTCTTTGTGGAAGATCTGAATCCCCTAACAATGCTGAGGACTATACTGCTGGAGGCACCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGAAGGAGGTAATACTTGTTAATGCTTTTCTCCTGGCTCATAAACTCTATCATACTACATGTGTTTTCCACTTTTAGCGTGTTCTATAGTTTGCAGAAGGAACTGATTTTAGTAACTATTTTTGTTTTAAATGGTTTGAGGTAGACGGGACAGAACAGAAAATTACAAGAAGATGGAAAGAGTTCTAAATTTTCTTTTGGGGGCAAATTAGGGGTCCTAAATTTGTTTTATCATCTAGAAATTAGAGGCTAAATTTAAAATTAAATTATTTTATGAACAATTTTCAGTTTCAAGTATTGATTTCCCCTCACCTAACGATTATGCATCTACCTGCGTCGTGACGTTTCTCTCATTATTTGCATCCTTTGCTCGTCTCTGTGCTTTGTCTGCACAAGTTGTTGCCCTATTAATCACCCACATTGAAGAACATTGTTGTCGGAACTTTTTCAAAAAGAAAAACCATACAAAGGGGGGTGACAGGGTGTCAACTCATAAGGAAATCTAGAGGAGAGAATTGTAAAGAATGTTATAAACATAAAGGAAATGTGTGTAACAAATTTTTTCTTTTAAGGACTTAGAGGAGAGAAGAGGAGAGAATACTCTATAAAATTTGAACACTCTACTCGTTGCAGAGAACGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCTGCTGAGAGACTGGCTGCAGCCAGAAGTGCTCAAGAGTCAGGAAGGGATGCAACGGATAGCGTCTGATTGATTATATGTGGTCATCTGCTAGGGCCTATGTTGATTAACTTGGGGACTGTGCAGTACATCAAGAGGTCCTCTTCTTTTTTCTAAGATACAATTTTGTTTTGCACATTCCTTATGTGATCATTGAGT

mRNA sequence

ACATCTCTACGTTTCGACCCACTCTCTCTTTAACCCAGAAGTCTCAGGCGAAGCAAAACAATCCATTTTGATCCCGCAACTCCGATCACCGTCGTCCACTGTCCACCGTCTCCGCTCATGAGTACTCCAGCAGTTCCGGGGAGCTCTGGTTTTTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCCGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGCTGTTAACTATCTTGCTCTTATTCCATCCAGGACAATACCTTTTGCCTGGAATCTCTTAACTGCTGGTTATGTTGAACAGTCAGTGTCTGGGGTTGTTGTCAGCACAGTTGGTCTTCTTTTTGTTGGGAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAGTTCATCTTTATAGTCAATTTTCTAACTTCTTTATGTGTTTTTATCACAGCGATTGCCCTGTACTATATTACGCAGGAGGAAATTTATCTTTATTTCCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTACCTGTACTGAAACTAAGAGCTAAGTGGTTACCGTCTCTTGCTGTATTTGTATCCATTGCTGTATGCTTTTGGACAACTGGGGCAGCAACATATCTTCCAACAATAATATTTGGGGCATACATCAGTTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATTGATCCAGTTGCATCAGTATTTCATCGTCTTCTTTGTGGAAGATCTGAATCCCCTAACAATGCTGAGGACTATACTGCTGGAGGCACCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGAAGGAGAGAACGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCTGCTGAGAGACTGGCTGCAGCCAGAAGTGCTCAAGAGTCAGGAAGGGATGCAACGGATAGCGTCTGATTGATTATATGTGGTCATCTGCTAGGGCCTATGTTGATTAACTTGGGGACTGTGCAGTACATCAAGAGGTCCTCTTCTTTTTTCTAAGATACAATTTTGTTTTGCACATTCCTTATGTGATCATTGAGT

Coding sequence (CDS)

ATGAGTACTCCAGCAGTTCCGGGGAGCTCTGGTTTTTTTACTGGATTCACCAAGCTATGCAAGGGCTTAGCCGTCGTGCTAATTGGCGGGCATATCTTGGTTCAGGTTTTTCCTGCGGCTGTTAACTATCTTGCTCTTATTCCATCCAGGACAATACCTTTTGCCTGGAATCTCTTAACTGCTGGTTATGTTGAACAGTCAGTGTCTGGGGTTGTTGTCAGCACAGTTGGTCTTCTTTTTGTTGGGAAGCTGCTTGAACCCATATGGGGCTCTAGAGAATTTTTGAAGTTCATCTTTATAGTCAATTTTCTAACTTCTTTATGTGTTTTTATCACAGCGATTGCCCTGTACTATATTACGCAGGAGGAAATTTATCTTTATTTCCCTGTATCTGGTTTCTATGGGATTCTAGCTGGGTTCTTGGTTGGGATCAAACAAATCATACCTGATCAAGAGTTACCTGTACTGAAACTAAGAGCTAAGTGGTTACCGTCTCTTGCTGTATTTGTATCCATTGCTGTATGCTTTTGGACAACTGGGGCAGCAACATATCTTCCAACAATAATATTTGGGGCATACATCAGTTGGATTTATCTGAGATACTGGCAGAGGAAACCTGAAGCAAAACTGAAAGGCGATCCAAGTGATGATTTTGCATTCTCTACATTCTTCCCTGAACTTTTACGGCCAGTCATTGATCCAGTTGCATCAGTATTTCATCGTCTTCTTTGTGGAAGATCTGAATCCCCTAACAATGCTGAGGACTATACTGCTGGAGGCACCCCGCTGCCCGGTTCAGATCCCATTGAGGCATCTCGAAGGAGAGAACGGGGAGCTAGAGCTTTGGAAGAAAGACTGGCTGCTGAGAGACTGGCTGCAGCCAGAAGTGCTCAAGAGTCAGGAAGGGATGCAACGGATAGCGTCTGA

Protein sequence

MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLTAGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTGAATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATDSV

Homology

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BLAST of Carg02399 vs. NCBI nr
Match: KAG7016283.1 (Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 600.5 bits (1547), Expect = 8.1e-168
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Carg02399 vs. NCBI nr
Match: KAG6578756.1 (Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 598.2 bits (1541), Expect = 4.0e-167
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Carg02399 vs. NCBI nr
Match: XP_023551332.1 (rhomboid-like protein 19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 8.4e-165
Identity = 304/308 (98.70%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Carg02399 vs. NCBI nr
Match: XP_022993030.1 (rhomboid-like protein 19 [Cucurbita maxima])

HSP 1 Score: 583.6 bits (1503), Expect = 1.0e-162
Identity = 300/308 (97.40%), Postives = 302/308 (98.05%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYI 
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIM 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAE+LAAAR AQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAEKLAAARIAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Carg02399 vs. NCBI nr
Match: XP_022939647.1 (rhomboid-like protein 19 [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 295/308 (95.78%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPV+KLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVVKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFST FPELLRPVIDPVASV H
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTLFPELLRPVIDPVASVIH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALE     ERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALE-----ERLAAARSAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 303

[Close]

BLAST of Carg02399 vs. ExPASy Swiss-Prot
Match: Q8LF05 (Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.0e-116
Identity = 209/302 (69.21%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 7   PGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLTAGYVEQ 66
           PG+S  FT FTKLCKGLA+VL+ GH++VQ  PA V YLALIP+RTIPFAWNL+T+GY E 
Sbjct: 4   PGTS-MFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLITSGYFEL 63

Query: 67  SVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYL 126
           SV GVV STV LLF+GK LEP+WGS EFLKFIF+VNFLT LCVF+TAIALYYIT+ E+YL
Sbjct: 64  SVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYITRLEVYL 123

Query: 127 YFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTGAATYLP 186
           Y P +GF+G+LAG LVGIKQIIPDQE+ +LK++AKWLPS+ + +SIA  F+T  +A YLP
Sbjct: 124 YMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLDSAAYLP 183

Query: 187 TIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGR 246
           T+IFG Y+ W+YLRY QR+PE KL+GDPSDDFAFSTFFPELLRPVIDP+A +FHR+LCGR
Sbjct: 184 TLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLCGR 243

Query: 247 SESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATD 306
           S + +   DY+  G PLPGSD  EASRRRERGARALEERL  ERL  AR+  E   D  D
Sbjct: 244 SNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDELQSDGLD 303

Query: 307 SV 309
           +V
Sbjct: 304 NV 304

[Close]

BLAST of Carg02399 vs. ExPASy Swiss-Prot
Match: Q12893 (Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28
Identity = 94/286 (32.87%), Postives = 144/286 (50.35%), Query Frame = 0


Query: 23  LAVVLIGGHILVQVFPAAVNY------------LALIPSRTIP---FAWNLLTAGYVEQS 82
           L  +L    ++V+   AAV +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILASASVVVKALCAAVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 83  VSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYLY 142
           V  V +S   ++  G+LLEP+WG+ E L F  +VN    L      +  Y  +   +YL+
Sbjct: 72  VWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLF 131

Query: 143 -FPVSGFYGILAGFLVGIKQIIPD-QELPVLKLRAKWLPSLAVFVSIAVCFWTTGAATYL 202
              + G  G L G LV +KQ + D   L V ++R   +P L + + + +   T   +  L
Sbjct: 132 TVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVMPMLLLALLLLLRLATLLQSPAL 191

Query: 203 PTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCG 262
            +  FG   SW+YLR++QR   ++ +GD +D FAF+TFFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHSLLVK 251

Query: 263 RSESPNNAEDYTAGG-----TPLPGSDPIEASRRRERGARALEERL 287
                   + Y  G        LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Carg02399 vs. ExPASy Swiss-Prot
Match: Q9WUH1 (Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28
Identity = 96/296 (32.43%), Postives = 150/296 (50.68%), Query Frame = 0


Query: 5   AVPGS----SGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIP---FAWN 64
           A+PG+           + + K L  V++  ++L   F      LA+ P    P   + W 
Sbjct: 4   ALPGARQHLGAILASASVVVKALCAVVLFLYLL--SFAVDTGCLAVTPGYLFPPNFWIWT 63

Query: 65  LLTAGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALY 124
           L T G +EQ V  V +S   ++  G+LLEP+WG+ E L F  +VN    L   +  +  Y
Sbjct: 64  LATHGLMEQHVWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTY 123

Query: 125 YITQEEIYLY-FPVSGFYGILAGFLVGIKQIIPD-QELPVLKLRAKWLPSLAVFVSIAVC 184
             +   +YL+   + G  G L G LV +KQ + D   L V ++R   +P L + + + + 
Sbjct: 124 MASFNLVYLFTIRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVVPMLLLALLLLLR 183

Query: 185 FWTTGAATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPV 244
             T   +  L +  FG   SW+YLR++QR   ++ +GD +D FAF+TFFPE+L+PV+  +
Sbjct: 184 LATLLQSPALASYGFGLLSSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLL 243

Query: 245 ASVFHRLLCGRSESPNNAEDYTAGG-----TPLPGSDPIEASRRRERGARALEERL 287
           A++ H LL          + Y  G        LPG+DP +A RRR+   +AL ERL
Sbjct: 244 ANLVHGLLVKVKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Carg02399 vs. ExPASy Swiss-Prot
Match: A4FUB8 (Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.5e-28
Identity = 94/286 (32.87%), Postives = 144/286 (50.35%), Query Frame = 0


Query: 23  LAVVLIGGHILVQVFPAAVNY------------LALIPSRTIP---FAWNLLTAGYVEQS 82
           L  +L    ++V+   AAV +            LA+ P    P   + W L T G +EQ 
Sbjct: 12  LGAILSSASVVVKALCAAVLFLYLLSFAVDTGCLAVTPGYLFPPNFWIWTLATHGLMEQH 71

Query: 83  VSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYLY 142
           V  V +S   ++  G+LLEP+WG+ E L F  +VN    L      +  Y  +   +YL+
Sbjct: 72  VWDVAISLATVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLF 131

Query: 143 -FPVSGFYGILAGFLVGIKQIIPD-QELPVLKLRAKWLPSLAVFVSIAVCFWTTGAATYL 202
              + G  G L G LV +KQ + D   L V ++R   +P L + + + +   T   +  L
Sbjct: 132 TVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSVVPMLLLGLLLLLRLATLLQSPAL 191

Query: 203 PTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCG 262
            +  FG   SW+YLR++QR   ++ +GD +D FAF+TFFPE+L+PV+  +A++ H LL  
Sbjct: 192 ASYGFGLISSWVYLRFYQR--HSRGRGDMADHFAFATFFPEILQPVVGLLANLVHGLLVK 251

Query: 263 RSESPNNAEDYTAGG-----TPLPGSDPIEASRRRERGARALEERL 287
                   + Y  G        LPG+DP +A RRR+   +AL ERL
Sbjct: 252 VKICQKTVKRYDVGAPSSITISLPGTDPQDAERRRQLALKALNERL 295

[Close]

BLAST of Carg02399 vs. ExPASy Swiss-Prot
Match: Q12239 (Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YOL107W PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-13
Identity = 70/274 (25.55%), Postives = 131/274 (47.81%), Query Frame = 0


Query: 44  LALIPSRTIPFAWNLLTAGYVEQSVSGVVVSTVGLLFVGKLLEPIW-GSREFLKFIFIVN 103
           L ++PS+   +  +L+ + +++     VVV+ + L+  G  +E  W  S+E  KFI ++ 
Sbjct: 68  LQMVPSQIWRYPTSLVLSNFIDTKAWKVVVNLLNLIIGGSFIERNWNSSKEMFKFIIVLG 127

Query: 104 FLTSLCVFITAIALYYITQEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLK----- 163
            LT++ + +  + + + +  ++ L  P+ G Y IL GF +  +Q++P+  +  LK     
Sbjct: 128 SLTNVLIIMLTLLVSFFS-NKVRLDIPLDGNYTILIGFPIIYRQLLPETTIIHLKTPQFL 187

Query: 164 ---LRAKWLPSLAVF-VSIAVCFWTTGAATYLPTIIFGAYISWIYLRYWQRKP------- 223
               R K LP   +F +++    W    A  L +I    + SW YLR++Q+         
Sbjct: 188 AKNFRFKLLPIFVMFTMTVTQIIWFHHFA-QLFSIWVTFFASWSYLRFFQKLAPLNCPSL 247

Query: 224 --------EAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGRSE--SPNNAEDY 283
                   +  L GD SD F    FFP+L++P++ P+ +  + ++  + +   P +  D 
Sbjct: 248 PTTNSQGGQEILVGDASDTFQLIYFFPDLIKPILRPIFNFIYNVVVVKFKVIKPFHDIDI 307

Query: 284 TAGGT--PLPGSDPIEA--SRRRERGARALEERL 287
             G T     G+  I     RRR+   + LEER+
Sbjct: 308 DIGNTIAESRGAKKIMTVEERRRQLALQVLEERM 339

[Close]

BLAST of Carg02399 vs. ExPASy TrEMBL
Match: A0A6J1JXD8 (rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.0e-163
Identity = 300/308 (97.40%), Postives = 302/308 (98.05%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYI 
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIM 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAE+LAAAR AQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAEKLAAARIAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 308

[Close]

BLAST of Carg02399 vs. ExPASy TrEMBL
Match: A0A6J1FHE1 (rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111445478 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.4e-159
Identity = 295/308 (95.78%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPGSSG FTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGSSGLFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPV+KLRAKWLPSLAVFVSIAV FWTTG
Sbjct: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVVKLRAKWLPSLAVFVSIAVSFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFST FPELLRPVIDPVASV H
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTLFPELLRPVIDPVASVIH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALE     ERLAAARSAQES
Sbjct: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALE-----ERLAAARSAQES 300

Query: 301 GRDATDSV 309
           GRDATDSV
Sbjct: 301 GRDATDSV 303

[Close]

BLAST of Carg02399 vs. ExPASy TrEMBL
Match: A0A6J1C1K7 (rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.4e-156
Identity = 283/308 (91.88%), Postives = 293/308 (95.13%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPG SG FTGFTKLCKGLAVVL+GGHILVQ FPA VNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGGSGLFTGFTKLCKGLAVVLVGGHILVQFFPAVVNYLALIPTRTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGYVEQSV GVV ST+GLLFVGKLLEPIWGSREFLKFIF+VNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYVEQSVYGVVASTIGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEE YLY P+SGFYGILAGFLVGIKQIIPDQELP+LKLRAKWLPSLA+ VSIAV FWT G
Sbjct: 121 QEESYLYMPISGFYGILAGFLVGIKQIIPDQELPLLKLRAKWLPSLALLVSIAVSFWTVG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVAS+FH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASIFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           RLLCGRSES NNA+DYT GG PLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RLLCGRSESSNNADDYTVGGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 309
           GRDATD+V
Sbjct: 301 GRDATDNV 308

[Close]

BLAST of Carg02399 vs. ExPASy TrEMBL
Match: A0A5D3C5G3 (Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00860 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.8e-155
Identity = 280/308 (90.91%), Postives = 296/308 (96.10%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTPAVPG SG FTGFTKLCKGLAVVLIGGHILVQ+FPA VNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPAVPGGSGSFTGFTKLCKGLAVVLIGGHILVQLFPAVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGY+EQS+ GVVVSTVGLLFVGKLLEPIWGSREFLKFIF+VNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEE YLY PVSGFYGILAGFLVGIKQ+IPDQELPVLKL+AKWLPS+AV VSIA+ FWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSVAVLVSIAISFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDP+AS+FH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           R+LCGRSES +NAEDYTA G PLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RMLCGRSESRDNAEDYTAAGAPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 309
           G+DAT++V
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Carg02399 vs. ExPASy TrEMBL
Match: A0A0A0KQN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.8e-155
Identity = 278/308 (90.26%), Postives = 296/308 (96.10%), Query Frame = 0


Query: 1   MSTPAVPGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLT 60
           MSTP+VPG SG FTGFTKLCKG+AVVLIGGHILVQ+FP  VNYLALIP+RTIPFAWNLLT
Sbjct: 1   MSTPSVPGGSGSFTGFTKLCKGIAVVLIGGHILVQLFPVVVNYLALIPARTIPFAWNLLT 60

Query: 61  AGYVEQSVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYIT 120
           AGY+EQS+ GVVVSTVGLLFVGKLLEPIWGSREFLKFIF+VNFLTSLCVFITAIALYYIT
Sbjct: 61  AGYIEQSIYGVVVSTVGLLFVGKLLEPIWGSREFLKFIFVVNFLTSLCVFITAIALYYIT 120

Query: 121 QEEIYLYFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTG 180
           QEE YLY PVSGFYGILAGFLVGIKQ+IPDQELPVLKL+AKWLPSLAV +SIAV FWTTG
Sbjct: 121 QEESYLYLPVSGFYGILAGFLVGIKQMIPDQELPVLKLKAKWLPSLAVLLSIAVSFWTTG 180

Query: 181 AATYLPTIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFH 240
           AATYLPTIIFG YISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDP+AS+FH
Sbjct: 181 AATYLPTIIFGTYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPIASIFH 240

Query: 241 RLLCGRSESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQES 300
           R+LCGRSESP+NAEDYTA G PLPGSDP+EASRRRERGARALEERLAAERLAAARSAQES
Sbjct: 241 RMLCGRSESPDNAEDYTAAGAPLPGSDPVEASRRRERGARALEERLAAERLAAARSAQES 300

Query: 301 GRDATDSV 309
           G+DAT++V
Sbjct: 301 GKDATENV 308

[Close]

BLAST of Carg02399 vs. TAIR 10
Match: AT3G07950.1 (rhomboid protein-related )

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-117
Identity = 209/302 (69.21%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 7   PGSSGFFTGFTKLCKGLAVVLIGGHILVQVFPAAVNYLALIPSRTIPFAWNLLTAGYVEQ 66
           PG+S  FT FTKLCKGLA+VL+ GH++VQ  PA V YLALIP+RTIPFAWNL+T+GY E 
Sbjct: 4   PGTS-MFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLITSGYFEL 63

Query: 67  SVSGVVVSTVGLLFVGKLLEPIWGSREFLKFIFIVNFLTSLCVFITAIALYYITQEEIYL 126
           SV GVV STV LLF+GK LEP+WGS EFLKFIF+VNFLT LCVF+TAIALYYIT+ E+YL
Sbjct: 64  SVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYITRLEVYL 123

Query: 127 YFPVSGFYGILAGFLVGIKQIIPDQELPVLKLRAKWLPSLAVFVSIAVCFWTTGAATYLP 186
           Y P +GF+G+LAG LVGIKQIIPDQE+ +LK++AKWLPS+ + +SIA  F+T  +A YLP
Sbjct: 124 YMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLDSAAYLP 183

Query: 187 TIIFGAYISWIYLRYWQRKPEAKLKGDPSDDFAFSTFFPELLRPVIDPVASVFHRLLCGR 246
           T+IFG Y+ W+YLRY QR+PE KL+GDPSDDFAFSTFFPELLRPVIDP+A +FHR+LCGR
Sbjct: 184 TLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLCGR 243

Query: 247 SESPNNAEDYTAGGTPLPGSDPIEASRRRERGARALEERLAAERLAAARSAQESGRDATD 306
           S + +   DY+  G PLPGSD  EASRRRERGARALEERL  ERL  AR+  E   D  D
Sbjct: 244 SNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDELQSDGLD 303

Query: 307 SV 309
           +V
Sbjct: 304 NV 304

The following BLAST results are available for this feature:

BLAST of Carg02399 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016283.1	8.1e-168	100.00	Rhomboid-like protein 19 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578756.1	4.0e-167	99.68	Rhomboid-like protein 19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023551332.1	8.4e-165	98.70	rhomboid-like protein 19 [Cucurbita pepo subsp. pepo]	[more]
XP_022993030.1	1.0e-162	97.40	rhomboid-like protein 19 [Cucurbita maxima]	[more]
XP_022939647.1	1.5e-158	95.78	rhomboid-like protein 19 [Cucurbita moschata]	[more]

BLAST of Carg02399 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF05	2.0e-116	69.21	Rhomboid-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=RBL19 PE=2 SV=1	[more]
Q12893	1.5e-28	32.87	Transmembrane protein 115 OS=Homo sapiens OX=9606 GN=TMEM115 PE=1 SV=1	[more]
Q9WUH1	1.5e-28	32.43	Transmembrane protein 115 OS=Mus musculus OX=10090 GN=Tmem115 PE=1 SV=1	[more]
A4FUB8	4.5e-28	32.87	Transmembrane protein 115 OS=Bos taurus OX=9913 GN=TMEM115 PE=2 SV=1	[more]
Q12239	4.1e-13	25.55	Transmembrane protein 115 homolog OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Carg02399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXD8	5.0e-163	97.40	rhomboid-like protein 19 OS=Cucurbita maxima OX=3661 GN=LOC111489172 PE=4 SV=1	[more]
A0A6J1FHE1	7.4e-159	95.78	rhomboid-like protein 19 OS=Cucurbita moschata OX=3662 GN=LOC111445478 PE=4 SV=1	[more]
A0A6J1C1K7	3.4e-156	91.88	rhomboid-like protein 19 OS=Momordica charantia OX=3673 GN=LOC111006580 PE=4 SV=...	[more]
A0A5D3C5G3	3.8e-155	90.91	Rhomboid-like protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0KQN7	3.8e-155	90.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G491820 PE=4 SV=1	[more]

BLAST of Carg02399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07950.1	1.4e-117	69.21	rhomboid protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01160	DUF1751_2	coord: 48..146 e-value: 2.1E-44 score: 163.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..277
None	No IPR available	PANTHER	PTHR13377:SF9	RHOMBOID-LIKE PROTEIN 19	coord: 9..308
IPR013861	TMEM115/Pdh1/Rbl19	PFAM	PF08551	DUF1751	coord: 48..146 e-value: 2.7E-32 score: 111.3
IPR013861	TMEM115/Pdh1/Rbl19	PANTHER	PTHR13377	PLACENTAL PROTEIN 6	coord: 9..308
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 15..211 e-value: 3.5E-7 score: 32.0
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 19..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02399-RA	Carg02399-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane