
Carg02095 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACAACGAGAAGAAACAAGGAGGAGACAACTTCTTTCAAATGCCACTTCACTATCCCAGATATTCGAAGATGGACTACGAGAACATGCCTGAATGGAAGCTCGACCGCCTTCTCCTCGAGTACGGTCTCCCAACACATGGCAACTTGCCCTACAAACGACAATTCGCAATGGGTGCTTTCCTCTGGCATGATTACCACCCTACCTTTAAATTAGATCCCTCCCTTCTCAATAACAAACTTATGTAG ATGGAGAACAACGAGAAGAAACAAGGAGGAGACAACTTCTTTCAAATGCCACTTCACTATCCCAGATATTCGAAGATGGACTACGAGAACATGCCTGAATGGAAGCTCGACCGCCTTCTCCTCGAGTACGGTCTCCCAACACATGGCAACTTGCCCTACAAACGACAATTCGCAATGGGTGCTTTCCTCTGGCATGATTACCACCCTACCTTTAAATTAGATCCCTCCCTTCTCAATAACAAACTTATGTAG ATGGAGAACAACGAGAAGAAACAAGGAGGAGACAACTTCTTTCAAATGCCACTTCACTATCCCAGATATTCGAAGATGGACTACGAGAACATGCCTGAATGGAAGCTCGACCGCCTTCTCCTCGAGTACGGTCTCCCAACACATGGCAACTTGCCCTACAAACGACAATTCGCAATGGGTGCTTTCCTCTGGCATGATTACCACCCTACCTTTAAATTAGATCCCTCCCTTCTCAATAACAAACTTATGTAG MENNEKKQGGDNFFQMPLHYPRYSKMDYENMPEWKLDRLLLEYGLPTHGNLPYKRQFAMGAFLWHDYHPTFKLDPSLLNNKLM Homology
BLAST of Carg02095 vs. NCBI nr
Match: KAG6578420.1 (hypothetical protein SDJN03_22868, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015984.1 hypothetical protein SDJN02_21088, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg02095 vs. NCBI nr
Match: XP_010108400.1 (uncharacterized protein LOC21393700 [Morus notabilis] >EXC19391.1 hypothetical protein L484_010408 [Morus notabilis]) HSP 1 Score: 111.7 bits (278), Expect = 3.1e-21 Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Carg02095 vs. NCBI nr
Match: PON65649.1 (cytoplasmic tRNA 2-thiolation protein [Trema orientale]) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of Carg02095 vs. NCBI nr
Match: PON37357.1 (hypothetical protein PanWU01x14_320780 [Parasponia andersonii]) HSP 1 Score: 108.6 bits (270), Expect = 2.6e-20 Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0
BLAST of Carg02095 vs. NCBI nr
Match: KAF4351382.1 (hypothetical protein G4B88_028221 [Cannabis sativa]) HSP 1 Score: 108.6 bits (270), Expect = 2.6e-20 Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Carg02095 vs. ExPASy TrEMBL
Match: W9SNS4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010408 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21 Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Carg02095 vs. ExPASy TrEMBL
Match: A0A2P5CX72 (Cytoplasmic tRNA 2-thiolation protein OS=Trema orientale OX=63057 GN=TorRG33x02_270200 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.4e-21 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of Carg02095 vs. ExPASy TrEMBL
Match: A0A2P5ALC9 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_320780 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0
BLAST of Carg02095 vs. ExPASy TrEMBL
Match: A0A7J6DZ12 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_028221 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 46/67 (68.66%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Carg02095 vs. ExPASy TrEMBL
Match: A0A200R4Z5 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1835g174 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20 Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0
BLAST of Carg02095 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 6.2e-20 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Carg02095 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 89.7 bits (221), Expect = 1.2e-18 Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of Carg02095 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 2.8e-12 Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of Carg02095 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 4.7e-12 Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Carg02095 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 6.2e-12 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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