Carg02031 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02031
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Gag-Pol polyprotein/retrotransposon
Location	Carg_Chr04: 7944864 .. 7948937 (+)
RNA-Seq Expression	Carg02031
Synteny	Carg02031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAACTCCACTTAAGCTCACCAATGGCGCCATCCCTTGCGTCGTTTTCCCGGTGGCGGTAAAAGCTTCACTCGATTTTGAAATTTCTGCGACATTTTAGAATCTGAATGCGTAAACATTTTAATTTCTATTATCATCTTCACGAATTGTTATTCTTCAGGGTTCGAATAAATTGCAGCCGAAGACAATTTTCAGAGCTTCCCCGCCATTTCGCGTCTCAAAGCCGATTAACATTTTTGTGAGTCGGAACCCTAGCATCCGACAATGCCTTAACAATGCCGAAATTAGCGTAAGTGTTTCTCAGTGAATTGGCAAAACAGCAATCTGCTTCACTTTCTGCAGTTTAATTCTTTCGTTCTATGGTGTTTTGTCCACTTGCTTCAGAATCTACGCCCTAATTTTTGGGGGTGGTTTCTGTGTTGTTTTGCTTATTGATGTCTCTTTCCAATTGAATTGTTCGGTCCGCGGAGAGATAATAATGTTACAAACTTCTAATTGCCCTGATTTTGCACCCTCTGAGTACCATCTTGTCTCTCTTTTGTCTAATTGGCAATGAATGCTATGGTTTGCTTGGTTCTATGCATTCCATTTGGCCCCATCACTATTTTCGTTTGAATTATGTTATAATTTCTTATATTTTGGAACTGAAACTTCTATGAAATCGCTGGAAGATTATTTCTATGAAGATTTTTTGTATGTTTAACTGTTGATTTACTTTCTATTGACTTCATTTGTTTATATGAATAGAATGTGGCAGTAAGTGAAATTTTAGGCATGAATGTTCCTGCATTTGGACAAGCGTATGTATTACTGATTTAGATACTGTCAATGTCCTGTCATAGGCCAATGATCCATTGAAATCGGAAAATGGCTTTTCCAATCATGAAACTGAAGGTATGGCATAAAAAACCGAACCTATGAACTCATGGTTGAGTCTTGATGCATTCAGTGAACTTTAGATTTTCAAATGTCACATTCTTGATTAAGAACTTACGAATTCTCGCCCCTTTCATTCTCTCTCTTGTTAGGTTCAATGGAAAAGAATGAAAATCATCAAAAACATCCGCAAAAATCGATCGAGTACTACTACTTGCCTTGCATATATTTGGTGAATTCTAAGGCTACTGCTTTTTTCTGTTAATAATGCCATGGAGGTGGTGAGACCTTCCTTTTTCTGCTCAATCTCTCTCTACTCTCTAGTTTCTAATCAAAGTCATACTTGTACAACAAAGTTTAGCAACAAAAATAGTCTACTTCATGTTCCGCTAATATTTGTACTGTTTTGTTGGTTATTGTCATTTTTAGTTTATATTGGTAGATTATTTTACATTTAAGAAAAAAGGGGGTCTCAGACTATATTTGATCCCCTAAGAATAAGTCATATCAAAGAGTAAGTCAGAGCCCTCAGACAGGCAATTTTTCATATTTATTTTTTATAATATCATTACTTATTGGTCAAGTCAAGTCAGCTTTGCGATTCTAGAATTTTGCAGTACATAAATGTTGGGTACAAAATACATAAAGTTATAAATTGAAAAGGAAACAAAGTTTCCATTTAGCAACCACATGAAATAAAACAGAGATCTTCTTGGCCTTATCAAAATGTTACAAAGATCTCCTTGGCTCTATTGAAAGGAAACGAAGAACTGTTCTTGCCTTTACCGAAATGAAACAAAATCTGCTTGACTTTATCGAAAGGAAACAAAGTTCTTCTTGGCCTTATTGAAATGAAACAAATATCTTATCAACCTTATCTTATTGGACGCATCAGTGCATACTTCATATTAGGCATACATCAGTCTTGGAGACATTATGTTTCATTTTCGCTCATTTATTCTAGTATACGTTCATCTTGTAGGGTGCTGGATAAATTGAGGAGATATGGAGTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTTGTTGTGTGGTGAGTTCATTTCTATATTTACTACTTAGTTACTACTATTATGAATTACTACTACGTAGGAGAGACTTAAAGGCTTCATAAGTTTAGGAGGTTATTTGGTATGCGTGTTGGTGATTAGAATTGGATGTTCGGGGATGGCAATGATAGGAACCAGATGATTAGGCTTGGAAATTGTATATAGATAGGTAAGAATTAAGAAACTACAGTAAGATGTTTGAAAGCCATTCTTGGAAGTTGGATGCTTCCACCTCCCTCAACCCGATCAATTTAGTGGGACTCTGATTAAAAACACCTTTACCACCGATCAGTGGGCGATAATTTATTTTATGTTATTATTATTTAAAATTAATAATAATAGCACTCTCTATGTCATACTATTGTTTGTCTTCTGTTTATTTCATCACTCTTCCATTAGCAGTGTACTCGGTCATGTTATCATATTGTTTATTTGCATTTTAGGTTTTACATTGCACCACCACCTGCGAAAATGGGCTATGTTGCAGCTGCTGGAAGGTGAAACTTTATTGTAGGAAGCCCTTTTTATATGGCTAGTTGCTTTACTCCTTTTGTTGGGCTATCATTTTGGTCGTTTTCTTTCATTTTTCTCAATGAAAGGTTGGTTTTTATCGAAAAAAATATGTGTAGGATGGAGTTTTATACTAAGACATTGACCCATTATTACCTTGTAGATTTCTCAAGATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTGGCAAGAGCGGCAGGGTGAGCTCTTATATTCCTGCTTTTTATCTATTACTATTCTGGTACGTGATTCTGCTCATCATTAAACAACCCAACTACATGAAGAGAACTGTAAGCTTCAACTTGTTTAGTGCAAATGGCATTCACTTGTTAAATGCTTGCATTTTTTTCCAACTTCCATAACTTAGAAAGGCCTACTTGATAACATCTTTGTTTTCAGTTTTCTATATTTATAATTATGCTCATCACCACTACTAGTAGATATTGTTCTCTTTGGTTATTTCCTTTCGGACTTCCCTTCAAGGTTTTCAAAACGCGTCTGCTAGGGAGAAGTTTTCACACCCTCGTAAAAAATGTTTTGTTCTTCTCTTTAACTGATATGGGATCTCACAATCCACCCCATTCGGGCCCAACGTCCTCGTTGGCATTCATTCCCTTCTCCAGTTGATGTGAGACTCCCCAATCCACCCCCTTCGAGGCCTAGCGTCCTTGTTGGCACACCGTCTCTTATCCACCCCCCTTAGGAGCTCAACCTCCTCGCTGGCACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACAGCCCGAGCCCACCGCTAGCATATATTGTCCTCTTTGGGCTTTCTCTTTCGGCCTTTCTCTCAAGGTTTTTAAAACGCATCTGCAAAGGTGAGGTTTCCACACTTTTATAAAGAATGTTTCGTTCTACTCCTCAACCGACTTGGGATCTCACAACTCATTTGCTCTTTCAAATCTATTTTCAAGATTGATTTGGTTGAAAAAAAAAAATAATCTGTTTTAAAAAATGGAAGTTTTACAAGTTTAATTTTCAAGAACAGAATACAAAATCATTGGATATTAAATCTCACTCCCATTTCAATTCCTAAAACGAGGAAGCAACCTGTTATACCAAAGCTTCTCATTCATGCAGAGCTCTTGCTATGGCACCGTTCGTCGACAGAGCATTGTCGTGGTTCACGGTCAAATACAACTTCAAGTCTCAGGGGAAGGTTACTAGAAACGAAACTTCTATACATCCATTGTGTTTTTTGTTTCATTTCATTGATATTATGCTCAAAATTAACCCATCTCCAGGCAGTTATGGCGATTGTTGGATTCTGCTTAGGATTGTCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAAGACAGGTTCTTCCCTTGGAAAGTAAGTACTTTTTCTCTCACATCATTCATTACCCTATTCCCAATGAGTGTTTCCTTGTCCTCAATATTGAAGGCTATCACCTTTTTTTCTTCCTTAAAAATTAAAATTTCCAATATTTTAAAACATAGGGTGGAGGTTTAACTAAAACGATACGTTTTATCAATGAGATTGTCGTTATTGTCGAGAATA

mRNA sequence

ATGCCAACTCCACTTAAGCTCACCAATGGCGCCATCCCTTGCGTCGTTTTCCCGGGTTCGAATAAATTGCAGCCGAAGACAATTTTCAGAGCTTCCCCGCCATTTCGCGTCTCAAAGCCGATTAACATTTTTGTGAGTCGGAACCCTAGCATCCGACAATGCCTTAACAATGCCGAAATTAGCGCCAATGATCCATTGAAATCGGAAAATGGCTTTTCCAATCATGAAACTGAAGGTTCAATGGAAAAGAATGAAAATCATCAAAAACATCCGCAAAAATCGATCGAGGTGCTGGATAAATTGAGGAGATATGGAGTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTTGTTGTGTGGTTTTACATTGCACCACCACCTGCGAAAATGGGCTATATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTGGCAAGAGCGGCAGGAGCTCTTGCTATGGCACCGTTCGTCGACAGAGCATTGTCGTGGTTCACGGTCAAATACAACTTCAAGTCTCAGGGGAAGGCAGTTATGGCGATTGTTGGATTCTGCTTAGGATTGTCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAAGACAGGTTCTTCCCTTGGAAAGTAAGTACTTTTTCTCTCACATCATTCATTACCCTATTCCCAATGAGTGTTTCCTTGTCCTCAATATTGAAGGCTATCACCTTTTTTTCTTCCTTAAAAATTAAAATTTCCAATATTTTAAAACATAGGGTGGAGGTTTAACTAAAACGATACGTTTTATCAATGAGATTGTCGTTATTGTCGAGAATA

Coding sequence (CDS)

ATGCCAACTCCACTTAAGCTCACCAATGGCGCCATCCCTTGCGTCGTTTTCCCGGGTTCGAATAAATTGCAGCCGAAGACAATTTTCAGAGCTTCCCCGCCATTTCGCGTCTCAAAGCCGATTAACATTTTTGTGAGTCGGAACCCTAGCATCCGACAATGCCTTAACAATGCCGAAATTAGCGCCAATGATCCATTGAAATCGGAAAATGGCTTTTCCAATCATGAAACTGAAGGTTCAATGGAAAAGAATGAAAATCATCAAAAACATCCGCAAAAATCGATCGAGGTGCTGGATAAATTGAGGAGATATGGAGTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTTGTTGTGTGGTTTTACATTGCACCACCACCTGCGAAAATGGGCTATATAATGGCTACAGTCTGGGCTGGAAGCCAAGTTACTAAGCTGGCAAGAGCGGCAGGAGCTCTTGCTATGGCACCGTTCGTCGACAGAGCATTGTCGTGGTTCACGGTCAAATACAACTTCAAGTCTCAGGGGAAGGCAGTTATGGCGATTGTTGGATTCTGCTTAGGATTGTCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAA

Protein sequence

MPTPLKLTNGAIPCVVFPGSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTVYYLTTFLVVWFYIAPPPAKMGYIMATVWAGSQVTKLARAAGALAMAPFVDRALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA

Homology

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BLAST of Carg02031 vs. NCBI nr
Match: KAG7031890.1 (hypothetical protein SDJN02_05931, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFPGSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNAEI 60
           MPTPLKLTNGAIPCVVFPGSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNAEI
Sbjct: 1   MPTPLKLTNGAIPCVVFPGSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNAEI 60

Query: 61  SANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTVYY 120
           SANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTVYY
Sbjct: 61  SANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTVYY 120

Query: 121 LTTFLVVWFYIAPPPAKMGYIMATVWAGSQVTKLARAAGALAMAPFVDRALSWFTVKYNF 180
           LTTFLVVWFYIAPPPAKMGYIMATVWAGSQVTKLARAAGALAMAPFVDRALSWFTVKYNF
Sbjct: 121 LTTFLVVWFYIAPPPAKMGYIMATVWAGSQVTKLARAAGALAMAPFVDRALSWFTVKYNF 180

Query: 181 KSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
           KSQGKAVMAIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 KSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 210

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BLAST of Carg02031 vs. NCBI nr
Match: XP_022956520.1 (uncharacterized protein LOC111458238 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.3e-105
Identity = 208/221 (94.12%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSNKLQPKTIF ASPPFRVSKPINIFVSRNPSIRQCLNNA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNKLQPKTIFIASPPFRVSKPINIFVSRNPSIRQCLNNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAPPPAKMGY         IMATVWAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
           ALSWFTVKYNFKSQGKAV+AIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 ALSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Carg02031 vs. NCBI nr
Match: KAG6601085.1 (hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.1 bits (1006), Expect = 3.0e-105
Identity = 207/221 (93.67%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCL+NA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLDNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAPPPAKMGY         IMATVWAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
            LSWFTVKYNFKSQGKAV+AIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 GLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Carg02031 vs. NCBI nr
Match: XP_023534257.1 (uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.3 bits (996), Expect = 4.3e-104
Identity = 205/221 (92.76%), Postives = 208/221 (94.12%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSNKLQPKTIFRASPPFRVSKP NIFVSRNPSIRQCLNNA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNKLQPKTIFRASPPFRVSKPNNIFVSRNPSIRQCLNNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSENGFSNHETEGSMEKNENH+KHP+KSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSENGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAPPPAKMGY         IMATVWAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
            LSWFTVKYNFKSQGKAV+AIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 GLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Carg02031 vs. NCBI nr
Match: XP_022983937.1 (uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima])

HSP 1 Score: 381.3 bits (978), Expect = 5.3e-102
Identity = 201/221 (90.95%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSN+LQPKTIFRASPPFRVSKP NIFVSRNPSIRQCLNNA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNELQPKTIFRASPPFRVSKPNNIFVSRNPSIRQCLNNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSE+GFSNHETEGSMEKNENH+KHP+KSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSESGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAP PAKMGY         IMAT+WAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATIWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
            LSWFTVKYNFKSQGKAV+AIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 GLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Carg02031 vs. ExPASy TrEMBL
Match: A0A6J1GY06 (uncharacterized protein LOC111458238 OS=Cucurbita moschata OX=3662 GN=LOC111458238 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 208/221 (94.12%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSNKLQPKTIF ASPPFRVSKPINIFVSRNPSIRQCLNNA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNKLQPKTIFIASPPFRVSKPINIFVSRNPSIRQCLNNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAPPPAKMGY         IMATVWAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
           ALSWFTVKYNFKSQGKAV+AIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 ALSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Carg02031 vs. ExPASy TrEMBL
Match: A0A6J1J0R3 (uncharacterized protein LOC111482401 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482401 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.5e-102
Identity = 201/221 (90.95%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSN+LQPKTIFRASPPFRVSKP NIFVSRNPSIRQCLNNA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNELQPKTIFRASPPFRVSKPNNIFVSRNPSIRQCLNNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSE+GFSNHETEGSMEKNENH+KHP+KSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSESGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAP PAKMGY         IMAT+WAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATIWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
            LSWFTVKYNFKSQGKAV+AIVGFCLGLSLLLFIAVTLLSA
Sbjct: 181 GLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Carg02031 vs. ExPASy TrEMBL
Match: A0A6J1J900 (uncharacterized protein LOC111482401 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482401 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 177/196 (90.31%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFP--GSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNA 60
           MPTPLKLTNGAIPCVVFP  GSN+LQPKTIFRASPPFRVSKP NIFVSRNPSIRQCLNNA
Sbjct: 1   MPTPLKLTNGAIPCVVFPVAGSNELQPKTIFRASPPFRVSKPNNIFVSRNPSIRQCLNNA 60

Query: 61  EISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 120
           EISANDPLKSE+GFSNHETEGSMEKNENH+KHP+KSIEVLDKLRRYGVSGILSYGLLNTV
Sbjct: 61  EISANDPLKSESGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRYGVSGILSYGLLNTV 120

Query: 121 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 180
           YYLTTFLVVWFYIAP PAKMGY         IMAT+WAGSQVTKLARAAGALAMAPFVDR
Sbjct: 121 YYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATIWAGSQVTKLARAAGALAMAPFVDR 180

Query: 181 ALSWFTVKYNFKSQGK 186
            LSWFTVKYNFKSQGK
Sbjct: 181 GLSWFTVKYNFKSQGK 196

[Close]

BLAST of Carg02031 vs. ExPASy TrEMBL
Match: A0A5A7SW01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00960 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 7.2e-73
Identity = 162/219 (73.97%), Postives = 171/219 (78.08%), Query Frame = 0


Query: 1   MPTPLKLTNGAIPCVVFPGSNKLQPKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNAEI 60
           M TP KLTNG IPCV FP S +LQ K+I RASPP  +S P        P+          
Sbjct: 1   MLTPPKLTNGNIPCVAFPDSIELQSKSISRASPPV-LSPP-------EPN---------- 60

Query: 61  SANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTVYY 120
            ANDPLKSE+ FSNHETEGSMEKNEN QKHPQKS EVLDKLRRYG+SGILSYGLLNT YY
Sbjct: 61  KANDPLKSEDDFSNHETEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTAYY 120

Query: 121 LTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDRAL 180
           LTTFLVVWFYIAP PAKMGY         IMATVWAGSQVTKLARAAGALA+APFVDR L
Sbjct: 121 LTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGL 180

Query: 181 SWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
           SWFTV YNF+SQGKA MAIVGFCLGL+LLLFI VTLLSA
Sbjct: 181 SWFTVNYNFESQGKAFMAIVGFCLGLALLLFIVVTLLSA 201

[Close]

BLAST of Carg02031 vs. ExPASy TrEMBL
Match: A0A1S3BDD7 (uncharacterized protein LOC103488806 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488806 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.6e-72
Identity = 154/195 (78.97%), Postives = 163/195 (83.59%), Query Frame = 0


Query: 25  PKTIFRASPPFRVSKPINIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKN 84
           P+   R SPP      I   VSRNPS+R CL+NA+ISANDPLKSE+ FSNHETEGSMEKN
Sbjct: 21  PELPRRFSPP---QSRIRFSVSRNPSVRLCLSNAKISANDPLKSEDDFSNHETEGSMEKN 80

Query: 85  ENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTVYYLTTFLVVWFYIAPPPAKMGY---- 144
           EN QKHPQKS EVLDKLRRYG+SGILSYGLLNT YYLTTFLVVWFYIAP PAKMGY    
Sbjct: 81  ENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTAYYLTTFLVVWFYIAPAPAKMGYVAAA 140

Query: 145 -----IMATVWAGSQVTKLARAAGALAMAPFVDRALSWFTVKYNFKSQGKAVMAIVGFCL 204
                IMATVWAGSQVTKLARAAGALA+APFVDR LSWFTV YNF+SQGKA MAIVGFCL
Sbjct: 141 GRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNYNFESQGKAFMAIVGFCL 200

Query: 205 GLSLLLFIAVTLLSA 211
           GL+LLLFI VTLLSA
Sbjct: 201 GLALLLFIVVTLLSA 212

[Close]

BLAST of Carg02031 vs. TAIR 10
Match: AT2G38695.1 (unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-41
Identity = 97/161 (60.25%), Postives = 115/161 (71.43%), Query Frame = 0


Query: 60  ISANDPLKSENGFSNHETEGSM-EKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 119
           +S N   KS+        EG M +KN   +K+P  S E+L KL+RYG+SGILSYGLLNTV
Sbjct: 52  LSHNVSNKSDAEAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTV 111

Query: 120 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAGALAMAPFVDR 179
           YY T FL+VWFY+AP P KMGY         +MA VWAGSQVTKL R  GA+A+AP VDR
Sbjct: 112 YYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDR 171

Query: 180 ALSWFTVKYNFKSQGKAVMAIVGFCLGLSLLLFIAVTLLSA 211
            LSWFTVK NF+SQGKA  A+VG CLG++L+LFI VTLL A
Sbjct: 172 GLSWFTVKCNFESQGKAFGALVGICLGMALMLFIVVTLLWA 212

[Close]

BLAST of Carg02031 vs. TAIR 10
Match: AT2G38695.3 (unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 97/209 (46.41%), Postives = 115/209 (55.02%), Query Frame = 0


Query: 60  ISANDPLKSENGFSNHETEGSM-EKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 119
           +S N   KS+        EG M +KN   +K+P  S E+L KL+RYG+SGILSYGLLNTV
Sbjct: 52  LSHNVSNKSDAEAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTV 111

Query: 120 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAG---------- 179
           YY T FL+VWFY+AP P KMGY         +MA VWAGSQVTKL R  G          
Sbjct: 112 YYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGEHVKFLGDKH 171

Query: 180 --------------------------------------ALAMAPFVDRALSWFTVKYNFK 211
                                                 A+A+AP VDR LSWFTVK NF+
Sbjct: 172 SRWMQDSRTCTCICSFDCYCRPYLVVMLLPMKNVDGCRAVALAPIVDRGLSWFTVKCNFE 231

[Close]

BLAST of Carg02031 vs. TAIR 10
Match: AT2G38695.2 (unknown protein; Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21
Identity = 61/110 (55.45%), Postives = 72/110 (65.45%), Query Frame = 0


Query: 60  ISANDPLKSENGFSNHETEGSM-EKNENHQKHPQKSIEVLDKLRRYGVSGILSYGLLNTV 119
           +S N   KS+        EG M +KN   +K+P  S E+L KL+RYG+SGILSYGLLNTV
Sbjct: 52  LSHNVSNKSDAEAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTV 111

Query: 120 YYLTTFLVVWFYIAPPPAKMGY---------IMATVWAGSQVTKLARAAG 160
           YY T FL+VWFY+AP P KMGY         +MA VWAGSQVTKL R  G
Sbjct: 112 YYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGG 161

The following BLAST results are available for this feature:

BLAST of Carg02031 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031890.1	1.4e-110	100.00	hypothetical protein SDJN02_05931, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022956520.1	2.3e-105	94.12	uncharacterized protein LOC111458238 [Cucurbita moschata]	[more]
KAG6601085.1	3.0e-105	93.67	hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023534257.1	4.3e-104	92.76	uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022983937.1	5.3e-102	90.95	uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg02031 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GY06	1.1e-105	94.12	uncharacterized protein LOC111458238 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A6J1J0R3	2.5e-102	90.95	uncharacterized protein LOC111482401 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J900	4.5e-91	90.31	uncharacterized protein LOC111482401 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7SW01	7.2e-73	73.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BDD7	3.6e-72	78.97	uncharacterized protein LOC103488806 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg02031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38695.1	2.5e-41	60.25	unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bac...	[more]
AT2G38695.3	1.7e-34	46.41	unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bac...	[more]
AT2G38695.2	1.3e-21	55.45	unknown protein; Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..92
None	No IPR available	PANTHER	PTHR34370	OS04G0600100 PROTEIN	coord: 24..210
None	No IPR available	PANTHER	PTHR34370:SF2	GAG-POL POLYPROTEIN/RETROTRANSPOSON	coord: 24..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02031-RA	Carg02031-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane