Carg01868 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGATATCCATTTCCTTCCCTAATTCTTCTCTCTCTCTCTCCCTTTCCCCTCCCTCCTCTCTTCCCCATGCCCTCTTTCCCTCTCCTCCCTCTTCCATGTCTCTCCTCCGCCGCTTGACGCCCGGCAATCTTAGATTTAACCTCCGTCAGCGCTCCGGCCGATTCGCTACCGCTGCTGCTGCAGCCGTACGTCAGGACACCGCTGCTTGGACTCAAGCTCCTCTCGCCCAAGTTGAGCCTGCCGCGGAGTCACTCTTCCATATTTCCATAGACGTGTCAGACGCGCCGGACCTCGCTGCTTCTCACACGCGTGCTGGTCAATACCTGCAGCTTCGTGTCCCTGACGTGGAGAAACCGACGTTCCTTGCCATTGCGTCTCCTCCGTTACTTGCGTCTGCGGAAGGCGTCTTTGAGTTTCTGGTGAAGAGCGTGGAGGGCTCAATCGCTGAGCTTCTCTGTGGATTGAAGAAAGGAGATGTCGTACAACTCAGTCAGGTCATGGGGAAGGGGTTCGATGTCGATCAAATCGCGCCGCCTCAAGATTACCCTACCGTTTTTATTTTTGCTACTGGATCTGGAATCAGGTGCGCGCTCATTTCTCGTTTTAGAACTTCATTCTCCTCTTTTGGCTTAACTTATCTCAACATGCTTTGTTTTCTAGTTTTCTGTTCTTCGTTGATTTTCTTCAGACATATGGATGTTCTCGTACAAATAATAACGAATTAGAATCAGAAGATTGTGAACTTCAATTTTGGTTAATGTTTATATGCGCTGTAAGGTTATATATCGATTTTGTTTCCTTTAGCTTTAGCTCCTGGTGTAGAAAACGGAAATTCAAGAGCAAAAAGTCGCCATTTCGAGTGGCTTGTTAAGGTCAGGGCAGGAGATTGTTAAGTTGGACAACGATAGAGAGTTTGTAATTGTACTTTCTTTGTATGGAACCCAGATCCCTCGACAAAAACTATGACAAAACTGGGAGCGGTTCATATTTTTCATCTCCTATATGTCTGAAGTGTCTAAACAGTGGATAGACTCTAAAGACATTAATGCAAATTTTAGGGTGTCTTGTAAAAATGGCGTATATATTTGAGATGAGATCAAGATCAGTATTGTAGTCCTACCGTTGTAAGCATCCTTCTGAGCAAACCCAAAGTTGTTGAAACCAATATTGTCCGAGAGATTGTTCAAATTAAAAGTTTGAATGTGTCGGAACATAGCTTCTGTCCAGAGTTCACTCAACTGAAAATTATATCATCGTCTTTGTAGTTGTAACTTGATTCGAAGTTGCTAACCCAATTCACAATCAGATGAAAAATTGAACTTCCCCTTTTCTACCGTCATGATTAACAGTTCAATCTTCATTATAAACGTCTTAAGTTAGAATATGTTTCCTTTTGAAGTTCGCTTAGGAGATAGGGTTGGAAGTGTAATGAGACGTGGAACGATACCTCTGTGTACTCCTTCAATCTCCCTAGGAGAGGATATGGGGGCAGAGGGTTATTTGATTCTTGTTTTTGTAGTGATTGCTCAGTGTTTGAGTTTACCATATAATCGTCTTGGATATTTTGGATATTTCCTCTTTGTACGATTGTTTTAATAAATAAGCATTGCTATACTTATCAATTATTGTTTGTCACATTGTTATTTTTACGTAAACGATTTTCCTTTTCATTAACTAAACGAATCATCAGGCTACAATCTGGTCATATTTTGTGGTCATGGCTTATTTTGTATAGGATGCGATGGTAGTAGGTCTTGTTTTTCATTTGCTTTATAGTGCCCAGTGCTCTCGGGATATATTCCTTAGCTATAGGATATGATGTTGCTACGCTTTTGCTGCTCAATGTGTCCAGTTGTCTCACAGTAAGGGAACTTTGGTATACTTTATTGTGAACAGTATCAGCCATATGCAGTAGAAATAACTTCAGTTTTTTACTTTCCGTTTGCTTTGCTGGTCTGACTGTTTACTTATCGATTTTGTGTAGTCCAATACGATCTCTAATTGAGTCAGGCTTTGGCGCCAGTAAGAGGTCTGATGTGAGGCTATATTATGGTGCAAGAAACCTCAAAAGAATGGCTTATCAGGTCTAGTTAATATTTACTTGTTGCATTGCCGCTTATTATCTACAGAAACAAGATCTGTGAAACTCATTTGTTTCTTTCTTTTATAGGATAGATTCGATGAGTGGGAATCTTCTGGTGTTAAGGTTGTGCCTGTATTGTCACAACCTGAGAATGATTGGACTGGTGAAAGTGGCTATGTTCAGGTAGGTCTCCATCTCCTTGTTTAGTTCTGTTGAAATTGTGGGTATGTGGGTTAACGCCTGCCGTTTTTTCCCCCTTCTTATAGGCTGCCTTCACGAAAGCAAAGAAAGCTTTTGACCCTCGTTCGTCGGGTGCTATACTCTGTGGTCAGAAACAGATGACTGAGGTACCCTGTGCTAGTTCACTGTTCTTCTTATTATTATTTATTATAAAATGAAAGAATACAAAGACATACATAAAATAAGTCCAAACAAAAAGAGCCTCAAAACAAATTATAGAAAGAGACTCCAATCTGAAAACAGGACCAATATCACAAGTACAAAAAGGCCTAGTGATCCTGCCCAAAGAGCAATAAATCTAGCCACCTCCCTACCTTCCTCATCTGATCTCTCAACCTCTCGTTGCTGTTATTTCTAGATTGTGCTATTATATGATCCTGAACCACTGCTATGAAGGAAGGGTAATGTCAAGGTCATCCTGATGTTTGCTTGGTGTAGTGCTATTATATGATTTGATTACTCGAGGACTCGATTCTTAAAATTGCCATTTGTTCTGCTTATATTGGTTGTGAATGAATGACCTAGTGGAATCATTCAGTTGAGAAAATAATGTACAAGTAATTTAGTGTTATATCCTGGCTAAAATGATAATCTCTAAAGCAAACACTCATTTTCTCATCGTTTTTGCAGGAAGTTACATCAATTCTTGTAGCAGATGGAGTCTCTAGTGAGAAGATACTAAAGAACTTTTAAAAAAGAAACAAACAGATGATAGCATTGTTGTAATCCATTAGGTCGAAGTTGTTTATAATCATTTGTTTCACCCTACTGCTGAGGGTAAGCACCTCAGCTTGGACAAGATAAAAAAAAAAAAGAGTATTTTGGGGACTAGAAACATCTACAATATTTATGTCCAAATTTTTCAGGACTGATGCGGCCAAGGTGTAGAACTTCTACCTCCCATCTGTTCTCATTTGGAGGTCAGGTTCATACGTACTGTTAGAAATTTCTTGGAACTTCATATTTTTGCAATAAAATTCTCCATATTTGAAGATCCTA ATGTCGATATCCATTTCCTTCCCTAATTCTTCTCTCTCTCTCTCCCTTTCCCCTCCCTCCTCTCTTCCCCATGCCCTCTTTCCCTCTCCTCCCTCTTCCATGTCTCTCCTCCGCCGCTTGACGCCCGGCAATCTTAGATTTAACCTCCGTCAGCGCTCCGGCCGATTCGCTACCGCTGCTGCTGCAGCCGTACGTCAGGACACCGCTGCTTGGACTCAAGCTCCTCTCGCCCAAGTTGAGCCTGCCGCGGAGTCACTCTTCCATATTTCCATAGACGTGTCAGACGCGCCGGACCTCGCTGCTTCTCACACGCGTGCTGGTCAATACCTGCAGCTTCGTGTCCCTGACGTGGAGAAACCGACGTTCCTTGCCATTGCGTCTCCTCCGTTACTTGCGTCTGCGGAAGGCGTCTTTGAGTTTCTGGTGAAGAGCGTGGAGGGCTCAATCGCTGAGCTTCTCTGTGGATTGAAGAAAGGAGATGTCGTACAACTCAGTCAGGTCATGGGGAAGGGGTTCGATGTCGATCAAATCGCGCCGCCTCAAGATTACCCTACCGTTTTTATTTTTGCTACTGGATCTGGAATCAGTCCAATACGATCTCTAATTGAGTCAGGCTTTGGCGCCAGTAAGAGGTCTGATGTGAGGCTATATTATGGTGCAAGAAACCTCAAAAGAATGGCTTATCAGGATAGATTCGATGAGTGGGAATCTTCTGGTGTTAAGGTTGTGCCTGTATTGTCACAACCTGAGAATGATTGGACTGGTGAAAGTGGCTATGTTCAGGCTGCCTTCACGAAAGCAAAGAAAGCTTTTGACCCTCGTTCGTCGGGTGCTATACTCTGTGGAAGTTACATCAATTCTTGTAGCAGATGGAGTCTCTAGTGAGAAGATACTAAAGAACTTTTAAAAAAGAAACAAACAGATGATAGCATTGTTGTAATCCATTAGGTCGAAGTTGTTTATAATCATTTGTTTCACCCTACTGCTGAGGGACTGATGCGGCCAAGGTGTAGAACTTCTACCTCCCATCTGTTCTCATTTGGAGGTCAGGTTCATACGTACTGTTAGAAATTTCTTGGAACTTCATATTTTTGCAATAAAATTCTCCATATTTGAAGATCCTA ATGTCGATATCCATTTCCTTCCCTAATTCTTCTCTCTCTCTCTCCCTTTCCCCTCCCTCCTCTCTTCCCCATGCCCTCTTTCCCTCTCCTCCCTCTTCCATGTCTCTCCTCCGCCGCTTGACGCCCGGCAATCTTAGATTTAACCTCCGTCAGCGCTCCGGCCGATTCGCTACCGCTGCTGCTGCAGCCGTACGTCAGGACACCGCTGCTTGGACTCAAGCTCCTCTCGCCCAAGTTGAGCCTGCCGCGGAGTCACTCTTCCATATTTCCATAGACGTGTCAGACGCGCCGGACCTCGCTGCTTCTCACACGCGTGCTGGTCAATACCTGCAGCTTCGTGTCCCTGACGTGGAGAAACCGACGTTCCTTGCCATTGCGTCTCCTCCGTTACTTGCGTCTGCGGAAGGCGTCTTTGAGTTTCTGGTGAAGAGCGTGGAGGGCTCAATCGCTGAGCTTCTCTGTGGATTGAAGAAAGGAGATGTCGTACAACTCAGTCAGGTCATGGGGAAGGGGTTCGATGTCGATCAAATCGCGCCGCCTCAAGATTACCCTACCGTTTTTATTTTTGCTACTGGATCTGGAATCAGTCCAATACGATCTCTAATTGAGTCAGGCTTTGGCGCCAGTAAGAGGTCTGATGTGAGGCTATATTATGGTGCAAGAAACCTCAAAAGAATGGCTTATCAGGATAGATTCGATGAGTGGGAATCTTCTGGTGTTAAGGTTGTGCCTGTATTGTCACAACCTGAGAATGATTGGACTGGTGAAAGTGGCTATGTTCAGGCTGCCTTCACGAAAGCAAAGAAAGCTTTTGACCCTCGTTCGTCGGGTGCTATACTCTGTGGAAGTTACATCAATTCTTGTAGCAGATGGAGTCTCTAG MSISISFPNSSLSLSLSPPSSLPHALFPSPPSSMSLLRRLTPGNLRFNLRQRSGRFATAAAAAVRQDTAAWTQAPLAQVEPAAESLFHISIDVSDAPDLAASHTRAGQYLQLRVPDVEKPTFLAIASPPLLASAEGVFEFLVKSVEGSIAELLCGLKKGDVVQLSQVMGKGFDVDQIAPPQDYPTVFIFATGSGISPIRSLIESGFGASKRSDVRLYYGARNLKRMAYQDRFDEWESSGVKVVPVLSQPENDWTGESGYVQAAFTKAKKAFDPRSSGAILCGSYINSCSRWSL Homology
BLAST of Carg01868 vs. NCBI nr
Match: KAG7032051.1 (Fruit-related protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 567.4 bits (1461), Expect = 7.2e-158 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Carg01868 vs. NCBI nr
Match: XP_022957049.1 (fruit protein pKIWI502-like [Cucurbita moschata]) HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149 Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Carg01868 vs. NCBI nr
Match: XP_023542967.1 (fruit protein pKIWI502-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 538.5 bits (1386), Expect = 3.6e-149 Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0
BLAST of Carg01868 vs. NCBI nr
Match: XP_022984149.1 (fruit protein pKIWI502-like [Cucurbita maxima]) HSP 1 Score: 537.3 bits (1383), Expect = 8.0e-149 Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Carg01868 vs. NCBI nr
Match: XP_004135068.1 (fruit protein pKIWI502 [Cucumis sativus] >KGN52130.1 hypothetical protein Csa_008343 [Cucumis sativus]) HSP 1 Score: 495.7 bits (1275), Expect = 2.7e-136 Identity = 255/282 (90.43%), Postives = 271/282 (96.10%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy Swiss-Prot
Match: P43394 (Fruit protein pKIWI502 OS=Actinidia deliciosa OX=3627 GN=pKIWI502 PE=2 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 8.0e-67 Identity = 145/297 (48.82%), Postives = 200/297 (67.34%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy Swiss-Prot
Match: P21394 (Xylene monooxygenase electron transfer component OS=Pseudomonas putida OX=303 GN=xylA PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.0e-05 Identity = 49/205 (23.90%), Postives = 87/205 (42.44%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy Swiss-Prot
Match: Q9L6L9 (NAD(P)H-flavin reductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=fre PE=1 SV=3) HSP 1 Score: 50.1 bits (118), Expect = 5.1e-05 Identity = 46/192 (23.96%), Postives = 88/192 (45.83%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy Swiss-Prot
Match: Q3C1E0 (Terephthalate 1,2-dioxygenase, reductase component 1 OS=Comamonas sp. OX=34028 GN=tphA1I PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.7e-05 Identity = 40/173 (23.12%), Postives = 77/173 (44.51%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy Swiss-Prot
Match: Q3C1D2 (Terephthalate 1,2-dioxygenase, reductase component 2 OS=Comamonas sp. OX=34028 GN=tphA1II PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.9e-04 Identity = 40/170 (23.53%), Postives = 75/170 (44.12%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy TrEMBL
Match: A0A6J1H0U5 (fruit protein pKIWI502-like OS=Cucurbita moschata OX=3662 GN=LOC111458542 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 7.8e-150 Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy TrEMBL
Match: A0A6J1J9M4 (fruit protein pKIWI502-like OS=Cucurbita maxima OX=3661 GN=LOC111482518 PE=4 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 3.9e-149 Identity = 279/282 (98.94%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy TrEMBL
Match: A0A0A0KR83 (FAD-binding FR-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G611610 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.3e-136 Identity = 255/282 (90.43%), Postives = 271/282 (96.10%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy TrEMBL
Match: A0A5D3CCD1 (Fruit protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001460 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 3.2e-135 Identity = 255/282 (90.43%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of Carg01868 vs. ExPASy TrEMBL
Match: A0A1S3BFN9 (fruit protein pKIWI502 OS=Cucumis melo OX=3656 GN=LOC103489330 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 2.0e-129 Identity = 238/255 (93.33%), Postives = 249/255 (97.65%), Query Frame = 0
BLAST of Carg01868 vs. TAIR 10
Match: AT1G15140.1 (FAD/NAD(P)-binding oxidoreductase ) HSP 1 Score: 347.1 bits (889), Expect = 1.4e-95 Identity = 175/262 (66.79%), Postives = 212/262 (80.92%), Query Frame = 0
BLAST of Carg01868 vs. TAIR 10
Match: AT1G15140.2 (FAD/NAD(P)-binding oxidoreductase ) HSP 1 Score: 322.8 bits (826), Expect = 2.9e-88 Identity = 164/241 (68.05%), Postives = 195/241 (80.91%), Query Frame = 0
BLAST of Carg01868 vs. TAIR 10
Match: AT1G15140.3 (FAD/NAD(P)-binding oxidoreductase ) HSP 1 Score: 322.8 bits (826), Expect = 2.9e-88 Identity = 164/241 (68.05%), Postives = 195/241 (80.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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