Carg01855 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01855
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1218)
Location	Carg_Chr04: 8983318 .. 8984483 (-)
RNA-Seq Expression	Carg01855
Synteny	Carg01855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTAGAACCAAAATCGTCGAATTTCATCAAAAGCAGATTAAATTTCAAATTTTGAAGCCACTTACATTAGTCTTCTTCCTTCTCGAGACGCACCAAAAAAGAAAGGGGCAAATAATGGCGCTTTCGGCTATTGTCTTGGTCACCATTACTTCTCTGCATCTCATCGCCTTCGTCCTCGCTGTCGGCGCCGAGCGCCGCCGCAGCACCGTAAGTTTTTGGTCTCATTCATTCACTAACCCTTTCCACTAATCTGTGTAAATGAAAGGCTTTTATATTTCTGCGGGTTCTGTTTTTTTTTTTTTTTTTTTTTTCTTTTTGTGAAGGCTAAGGTTGTGCCGGATGAGTACGATGAGTACACGTACTGTGTGTACGGCACCGACGCATCGACTGTGTACGGACTATCGGCGTTCGGTTTGCTTCTGATAAGCCAGGCGGTGGTTAACGGCGTTACTAGATGTTTCTGCTGTGGGAAGGGTTTAATTAGTGGAAAAGCCACCACTGTCGCCATTTTCTTCTTCGTCTTTTCCTGGTAAAATGTATTCCAAATTTGAGATCTTTGTCTGGAAATCAGCTAATTTATTCAATTGGGTTTTGAAAATGACTCAAACCCAACAACCCCATCAAGGAAAAATCCAACTTTGACGGCGATATTTGTCTATATACTCTGTTTTTTTCAGGATCAGCTTTGTGGGAGCAGAGATTGGACTGTTGGCCGGATCTGCGAGGAATGCGTACCACACAAAGTACAGAGCGGCGTTTGGCGGCGAAGATTTGTCGTGTGCAACTCTCCGGAAGGGGGTGTTCGCCGGCGCCGGGGCCATGACGGTACTGTCGATGGTGGGTTCGATATCATACTATTGGGCGCATTCGAAAGCTGACACTGGAGGGTGGCAGAAACAGCAGAATGAAGGGGGGGTGGGCTTGGCGGCGCCTGCTCATGATCTCAAACAAAATGCTCAAATTGACAAGGCGTAGTGTGTTTGAGCTTTGGATTCGGCTTCGGCTTCTGAGATTATTATTATAATATTGGAAAAGTATTTGTTTTTAGTGAAAGAAGGAGAACAAAGTGTAAGCCACTCGTATCAATCATCAACCAACCTTTTCTTTTCTTTTGCTTTCTTTATTCAAGTGTCTCTTATTTTAAGGATTTTTATTATTTTTTTCA

mRNA sequence

TCGTAGAACCAAAATCGTCGAATTTCATCAAAAGCAGATTAAATTTCAAATTTTGAAGCCACTTACATTAGTCTTCTTCCTTCTCGAGACGCACCAAAAAAGAAAGGGGCAAATAATGGCGCTTTCGGCTATTGTCTTGGTCACCATTACTTCTCTGCATCTCATCGCCTTCGTCCTCGCTGTCGGCGCCGAGCGCCGCCGCAGCACCGCTAAGGTTGTGCCGGATGAGTACGATGAGTACACGTACTGTGTGTACGGCACCGACGCATCGACTGTGTACGGACTATCGGCGTTCGGTTTGCTTCTGATAAGCCAGGCGGTGGTTAACGGCGTTACTAGATGTTTCTGCTGTGGGAAGGGTTTAATTAGTGGAAAAGCCACCACTGTCGCCATTTTCTTCTTCGTCTTTTCCTGGATCAGCTTTGTGGGAGCAGAGATTGGACTGTTGGCCGGATCTGCGAGGAATGCGTACCACACAAAGTACAGAGCGGCGTTTGGCGGCGAAGATTTGTCGTGTGCAACTCTCCGGAAGGGGGTGTTCGCCGGCGCCGGGGCCATGACGGTACTGTCGATGGTGGGTTCGATATCATACTATTGGGCGCATTCGAAAGCTGACACTGGAGGGTGGCAGAAACAGCAGAATGAAGGGGGGGTGGGCTTGGCGGCGCCTGCTCATGATCTCAAACAAAATGCTCAAATTGACAAGGCGTAGTGTGTTTGAGCTTTGGATTCGGCTTCGGCTTCTGAGATTATTATTATAATATTGGAAAAGTATTTGTTTTTAGTGAAAGAAGGAGAACAAAGTGTAAGCCACTCGTATCAATCATCAACCAACCTTTTCTTTTCTTTTGCTTTCTTTATTCAAGTGTCTCTTATTTTAAGGATTTTTATTATTTTTTTCA

Coding sequence (CDS)

ATGGCGCTTTCGGCTATTGTCTTGGTCACCATTACTTCTCTGCATCTCATCGCCTTCGTCCTCGCTGTCGGCGCCGAGCGCCGCCGCAGCACCGCTAAGGTTGTGCCGGATGAGTACGATGAGTACACGTACTGTGTGTACGGCACCGACGCATCGACTGTGTACGGACTATCGGCGTTCGGTTTGCTTCTGATAAGCCAGGCGGTGGTTAACGGCGTTACTAGATGTTTCTGCTGTGGGAAGGGTTTAATTAGTGGAAAAGCCACCACTGTCGCCATTTTCTTCTTCGTCTTTTCCTGGATCAGCTTTGTGGGAGCAGAGATTGGACTGTTGGCCGGATCTGCGAGGAATGCGTACCACACAAAGTACAGAGCGGCGTTTGGCGGCGAAGATTTGTCGTGTGCAACTCTCCGGAAGGGGGTGTTCGCCGGCGCCGGGGCCATGACGGTACTGTCGATGGTGGGTTCGATATCATACTATTGGGCGCATTCGAAAGCTGACACTGGAGGGTGGCAGAAACAGCAGAATGAAGGGGGGGTGGGCTTGGCGGCGCCTGCTCATGATCTCAAACAAAATGCTCAAATTGACAAGGCGTAG

Protein sequence

MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAFGLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYHTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGVGLAAPAHDLKQNAQIDKA

Homology

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BLAST of Carg01855 vs. NCBI nr
Match: XP_022957387.1 (uncharacterized protein LOC111458800 isoform X1 [Cucurbita moschata] >KAG7032063.1 hypothetical protein SDJN02_06106 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-103
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV
Sbjct: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180

Query: 181 GLAAPAHDLKQNAQIDKA 199
           GLAAPAHDLKQNAQIDKA
Sbjct: 181 GLAAPAHDLKQNAQIDKA 198

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BLAST of Carg01855 vs. NCBI nr
Match: KAG6601276.1 (hypothetical protein SDJN03_06509, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF
Sbjct: 500 MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 559

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH
Sbjct: 560 GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 619

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSI YYWAHSKADTGGWQKQQNEGGV
Sbjct: 620 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQQNEGGV 679

Query: 181 GLAAPAHDLKQNAQIDKA 199
           GLAAPAHDLKQNAQIDKA
Sbjct: 680 GLAAPAHDLKQNAQIDKA 697

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BLAST of Carg01855 vs. NCBI nr
Match: XP_022986328.1 (uncharacterized protein LOC111484079 [Cucurbita maxima])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSI YYWAHSKADTGGWQKQQNEGGV
Sbjct: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQQNEGGV 180

Query: 181 GLAAPAHDLKQNAQIDK 198
           GLAAP HDLKQNAQIDK
Sbjct: 181 GLAAPVHDLKQNAQIDK 197

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BLAST of Carg01855 vs. NCBI nr
Match: XP_023514518.1 (uncharacterized protein LOC111778772 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.1 bits (967), Expect = 9.4e-101
Identity = 194/198 (97.98%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAA GGEDLSCATLRKGVFAGAGAMTVLSMVGSI YYWAHSKADTGGWQKQQNEGGV
Sbjct: 121 TKYRAAIGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQQNEGGV 180

Query: 181 GLAAPAHDLKQNAQIDKA 199
           GLAAP HDLKQNA IDKA
Sbjct: 181 GLAAPVHDLKQNAHIDKA 198

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BLAST of Carg01855 vs. NCBI nr
Match: XP_038892755.1 (uncharacterized protein LOC120081728 [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVL TITSLHLIAFVLAVGAERRRSTAKVVPDEYDE TYC+YGTDASTVYGLSAF
Sbjct: 1   MALSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEKTYCLYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGK TTVAIFFFVFSWISFVGAEI LLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSWISFVGAEIALLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAAFG E+LSC TLRKGVFAGA AMTVLSMVGSI YYW HSKADTGGW+K QNE GV
Sbjct: 121 TKYRAAFGVEELSCTTLRKGVFAGAAAMTVLSMVGSILYYWMHSKADTGGWEKHQNE-GV 180

Query: 181 GLAAPAHDLKQNAQIDKA 199
           G+AA  HDLKQN Q +KA
Sbjct: 181 GMAAGVHDLKQNVQFEKA 197

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BLAST of Carg01855 vs. ExPASy TrEMBL
Match: A0A6J1GYZ6 (uncharacterized protein LOC111458800 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458800 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV
Sbjct: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180

Query: 181 GLAAPAHDLKQNAQIDKA 199
           GLAAPAHDLKQNAQIDKA
Sbjct: 181 GLAAPAHDLKQNAQIDKA 198

[Close]

BLAST of Carg01855 vs. ExPASy TrEMBL
Match: A0A6J1JG73 (uncharacterized protein LOC111484079 OS=Cucurbita maxima OX=3661 GN=LOC111484079 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.4e-102
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEGGV 180
           TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSI YYWAHSKADTGGWQKQQNEGGV
Sbjct: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQQNEGGV 180

Query: 181 GLAAPAHDLKQNAQIDK 198
           GLAAP HDLKQNAQIDK
Sbjct: 181 GLAAPVHDLKQNAQIDK 197

[Close]

BLAST of Carg01855 vs. ExPASy TrEMBL
Match: A0A6J1H027 (uncharacterized protein LOC111458800 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458800 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.9e-89
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 32  AKVVPDEYDEYTYCVYGTDASTVYGLSAFGLLLISQAVVNGVTRCFCCGKGLISGKATTV 91
           AKVVPDEYDEYTYCVYGTDASTVYGLSAFGLLLISQAVVNGVTRCFCCGKGLISGKATTV
Sbjct: 18  AKVVPDEYDEYTYCVYGTDASTVYGLSAFGLLLISQAVVNGVTRCFCCGKGLISGKATTV 77

Query: 92  AIFFFVFSWISFVGAEIGLLAGSARNAYHTKYRAAFGGEDLSCATLRKGVFAGAGAMTVL 151
           AIFFFVFSWISFVGAEIGLLAGSARNAYHTKYRAAFGGEDLSCATLRKGVFAGAGAMTVL
Sbjct: 78  AIFFFVFSWISFVGAEIGLLAGSARNAYHTKYRAAFGGEDLSCATLRKGVFAGAGAMTVL 137

Query: 152 SMVGSISYYWAHSKADTGGWQKQQNEGGVGLAAPAHDLKQNAQIDKA 199
           SMVGSISYYWAHSKADTGGWQKQQNEGGVGLAAPAHDLKQNAQIDKA
Sbjct: 138 SMVGSISYYWAHSKADTGGWQKQQNEGGVGLAAPAHDLKQNAQIDKA 184

[Close]

BLAST of Carg01855 vs. ExPASy TrEMBL
Match: A0A5D3CD50 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001250 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85
Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TI SLHLIAFVLAVGAERRRSTA VVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATIASLHLIAFVLAVGAERRRSTANVVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGK TTVAIFFFVFSWISF+GAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSWISFIGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEG-G 180
           TKYRA FG E LSCATLRKGVFAGA AMTVLSMVGSI +YW HSKADTGGW+K QNEG G
Sbjct: 121 TKYRATFGVEKLSCATLRKGVFAGAAAMTVLSMVGSILFYWMHSKADTGGWEKHQNEGVG 180

Query: 181 VGLAAPAH-DLK-QNAQ 195
           +G AA  H D+K QNAQ
Sbjct: 181 MGAAAGVHLDMKQQNAQ 197

[Close]

BLAST of Carg01855 vs. ExPASy TrEMBL
Match: A0A1S3BF21 (uncharacterized protein LOC103489308 OS=Cucumis melo OX=3656 GN=LOC103489308 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.5e-85
Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TI SLHLIAFVLAVGAERRRSTA VVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATIASLHLIAFVLAVGAERRRSTANVVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYH 120
           GLLLISQAVVNGVTRCFCCGKGLISGK TTVAIFFFVFSWISF+GAEIGLLAGSARNAYH
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISGKTTTVAIFFFVFSWISFIGAEIGLLAGSARNAYH 120

Query: 121 TKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEG-G 180
           TKYRA FG E LSCATLRKGVFAGA AMTVLSMVGSI +YW HSKADTGGW+K QNEG G
Sbjct: 121 TKYRATFGVEKLSCATLRKGVFAGAAAMTVLSMVGSILFYWMHSKADTGGWEKHQNEGVG 180

Query: 181 VGLAAPAH-DLK-QNAQ 195
           +G AA  H D+K QNAQ
Sbjct: 181 MGAAAGVHLDMKQQNAQ 197

[Close]

BLAST of Carg01855 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 235.3 bits (599), Expect = 4.1e-62
Identity = 123/200 (61.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60
           MA+S  +L  +T+LHL+AFV A GAERRRSTA  VPD+YDE T C YGT+ASTVYG+SAF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLLLISQAVVNGVTRCFCCGKGLISGKATTV-AIFFFVFSWISFVGAEIGLLAGSARNAY 120
           GLLL+SQAVVNGVT+C C GKGL++G + TV AI FFV SW+SF+GAE  LL GSARNAY
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAY 120

Query: 121 HTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQQNEG- 180
           HTK    + G++LSCA L  GVFA   A T++S++ +I YY AHSKADTGGW+K QN+G 
Sbjct: 121 HTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADTGGWEKHQNDGI 180

Query: 181 GVGLAAPAHDLK-QNAQIDK 198
            +G+  P+   K QN + +K
Sbjct: 181 NIGMTTPSDAPKQQNTEFNK 200

[Close]

BLAST of Carg01855 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 142.1 bits (357), Expect = 4.7e-34
Identity = 78/164 (47.56%), Postives = 103/164 (62.80%), Query Frame = 0


Query: 4   SAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAFGLL 63
           S +V++ +  L LIA  LA+ AE+RRS  KV  D   +Y YCVYGTD +T YG  AF LL
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 64  LISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYHTKY 123
            +SQ ++   +RCFCCGK L  G +   AI  F+  W+ F+ AE+ LLA S RNAYHT+Y
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQY 122

Query: 124 RAAFGGED-LSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKA 167
           R  +  ED  SC  +RKGVFA   A T+ + + S  YY  +S+A
Sbjct: 123 RKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]

BLAST of Carg01855 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-33
Identity = 78/163 (47.85%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 4   SAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAFGLL 63
           S IV   +   +LIAF LAV AE+RRSTA+VV D   +Y YCVY +D +T YG+ AF   
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 64  LISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYHTKY 123
           + SQ ++  V+RCFCCGK L  G +  +A+  F+ SW+ F+ AEI LLAGS  NAYHTKY
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKY 122

Query: 124 RAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKA 167
           R  F      C TLRKGVFA   +    + + S  YY+ +  A
Sbjct: 123 RTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

[Close]

BLAST of Carg01855 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-33
Identity = 76/167 (45.51%), Postives = 104/167 (62.28%), Query Frame = 0


Query: 4   SAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAFGLL 63
           S +V++ +  L LIA  LA+ AE+RRS  KVVPD   E+ +C YG+D +T YG  AF LL
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 64  LISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYHTKY 123
            ISQ ++   +RCFCCGK L  G +    I  F+  W+ F+ AE+ LLAGS RNAYHT Y
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTY 122

Query: 124 RAAFGGED-LSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTG 170
           R  +  E+  SC  +RKGVFA   +  + + + S  YY ++S+A  G
Sbjct: 123 RRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDG 169

[Close]

BLAST of Carg01855 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 4   SAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAFGLL 63
           S ++L+ +    LIAF LAV AE+RR+T ++  +  D  +YCVY  D +T  G+ +F +L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESRD-LSYCVYDKDIATGLGVGSFLVL 62

Query: 64  LISQAVVNGVTRCFCCGKGLISGKATTVAIFFFVFSWISFVGAEIGLLAGSARNAYHTKY 123
           L SQ ++   +RC CCG+ L    + + AIF F+ +W+ F  A++ LLAGS RNAYHTKY
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKY 122

Query: 124 RAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKA 167
           R  FG    SC +LRKGVF    A  VL+ + S  YY   S+A
Sbjct: 123 RVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRA 164

The following BLAST results are available for this feature:

BLAST of Carg01855 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957387.1	3.4e-103	100.00	uncharacterized protein LOC111458800 isoform X1 [Cucurbita moschata] >KAG7032063...	[more]
KAG6601276.1	1.7e-102	99.49	hypothetical protein SDJN03_06509, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022986328.1	1.1e-101	98.98	uncharacterized protein LOC111484079 [Cucurbita maxima]	[more]
XP_023514518.1	9.4e-101	97.98	uncharacterized protein LOC111778772 [Cucurbita pepo subsp. pepo]	[more]
XP_038892755.1	3.3e-90	89.90	uncharacterized protein LOC120081728 [Benincasa hispida]	[more]

BLAST of Carg01855 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg01855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYZ6	1.7e-103	100.00	uncharacterized protein LOC111458800 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JG73	5.4e-102	98.98	uncharacterized protein LOC111484079 OS=Cucurbita maxima OX=3661 GN=LOC111484079...	[more]
A0A6J1H027	8.9e-89	100.00	uncharacterized protein LOC111458800 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3CD50	3.5e-85	87.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BF21	3.5e-85	87.82	uncharacterized protein LOC103489308 OS=Cucumis melo OX=3656 GN=LOC103489308 PE=...	[more]

BLAST of Carg01855 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68220.1	4.1e-62	61.50	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	4.7e-34	47.56	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	3.1e-33	47.85	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	4.0e-33	45.51	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	2.1e-29	44.17	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 59..153 e-value: 3.1E-24 score: 85.3
None	No IPR available	PANTHER	PTHR31769:SF63	AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)	coord: 4..185
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 4..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01855-RA	Carg01855-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane