Carg01844 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01844
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr04: 9036469 .. 9037509 (+)
RNA-Seq Expression	Carg01844
Synteny	Carg01844

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCAAACTTTGAATTTTCTTCCCCTTTTATTTCCGCTTTCATCGTTTCTTTGGTGCCATATGTCGGGAGCATGATTTAGTTATATTAATATGCTTTGGTTGTTTCTCTTCTCTGCAGCTTTTTATTTGTCCCTTGAAATAAGATAACCCAAGGAAAATATGAATCACTGCGCAATTCTGTCAAACGCCTTCTCGAGCCACGAGGAGATGAGAGCCCCTGTTCCGGGTCCCATTTCTGACCTGAGAGATCAACTTGTTTGCCCTAAACCACGTCGACTCAGCAATCCAAAAGTCACCGTCATCGGCCACGCCGATAGCTCCCTCCGATGGAATCTAAGGTTAGTTTTTTCTTTATTTTATAACTCCCTTTGAAATACCATCCTTTTGTTGAAGGTTCTAATTCTTCTTGAATTGAATTTCAGTCACCAAGTAGAGCAAATTGACATGGCCACCGGACCGGATCTGCTGGACTTCCTCCTGACAAGGGTATGCTCCTATCTGTTCGCTTTGAGTTTCTTCAGATCATAAAATTAATATAATTTAGAGGAGGCCCTCGTAGCTTCCTTTGTCTGCATCAAAGTCATTTCCAGGGATCATAAGTCGTTAACCATCATGTCGTTAATCTTGTAGGGTGGTTGCAGCGTGGACCAGTCGTTTACGCAGTTGGCTTCGTCGCCCCCTTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGCCCGATTTGGGGATGAAAAATTCATCCCCTTCGCACCAATTGCCTCACCGTCTGGTCAGTTGTCGCCATCTACAGCCTCTAGGAAAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCGCGACAGGGACAGGCAAAATTGCAGCATCCCTGCCTTCGCGTAGAAACCCATCTCATTATCAAATCCATAGAATACATGACAGAGAAAAAAAGGATACGATTTGCCTTTCCTTTTTGTAAATACGTCGTAAGTGTTCTTTGTAAATGTAAATAAAAA

mRNA sequence

AAATCAAACTTTGAATTTTCTTCCCCTTTTATTTCCGCTTTCATCGTTTCTTTGGTGCCATATGTCGGGAGCATGATTTAGTTATATTAATATGCTTTGGTTGTTTCTCTTCTCTGCAGCTTTTTATTTGTCCCTTGAAATAAGATAACCCAAGGAAAATATGAATCACTGCGCAATTCTGTCAAACGCCTTCTCGAGCCACGAGGAGATGAGAGCCCCTGTTCCGGGTCCCATTTCTGACCTGAGAGATCAACTTGTTTGCCCTAAACCACGTCGACTCAGCAATCCAAAAGTCACCGTCATCGGCCACGCCGATAGCTCCCTCCGATGGAATCTAAGTCACCAAGTAGAGCAAATTGACATGGCCACCGGACCGGATCTGCTGGACTTCCTCCTGACAAGGGGTGGTTGCAGCGTGGACCAGTCGTTTACGCAGTTGGCTTCGTCGCCCCCTTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGCCCGATTTGGGGATGAAAAATTCATCCCCTTCGCACCAATTGCCTCACCGTCTGGTCAGTTGTCGCCATCTACAGCCTCTAGGAAAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCGCGACAGGGACAGGCAAAATTGCAGCATCCCTGCCTTCGCGTAGAAACCCATCTCATTATCAAATCCATAGAATACATGACAGAGAAAAAAAGGATACGATTTGCCTTTCCTTTTTGTAAATACGTCGTAAGTGTTCTTTGTAAATGTAAATAAAAA

Coding sequence (CDS)

ATGAATCACTGCGCAATTCTGTCAAACGCCTTCTCGAGCCACGAGGAGATGAGAGCCCCTGTTCCGGGTCCCATTTCTGACCTGAGAGATCAACTTGTTTGCCCTAAACCACGTCGACTCAGCAATCCAAAAGTCACCGTCATCGGCCACGCCGATAGCTCCCTCCGATGGAATCTAAGTCACCAAGTAGAGCAAATTGACATGGCCACCGGACCGGATCTGCTGGACTTCCTCCTGACAAGGGGTGGTTGCAGCGTGGACCAGTCGTTTACGCAGTTGGCTTCGTCGCCCCCTTTTTTATGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGCCCGATTTGGGGATGAAAAATTCATCCCCTTCGCACCAATTGCCTCACCGTCTGGTCAGTTGTCGCCATCTACAGCCTCTAGGAAAGGAGGCCGTGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCGCGACAGGGACAGGCAAAATTGCAGCATCCCTGCCTTCGCGTAG

Protein sequence

MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLSHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGDEKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA

Homology

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BLAST of Carg01844 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

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BLAST of Carg01844 vs. NCBI nr
Match: KAG6601286.1 (hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of Carg01844 vs. NCBI nr
Match: XP_023517111.1 (uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.2 bits (949), Expect = 1.0e-98
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFSSHEEMRAPVPGP SDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPFSDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDM TGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMGTGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of Carg01844 vs. NCBI nr
Match: XP_022986983.1 (uncharacterized protein LOC111484540 [Cucurbita maxima])

HSP 1 Score: 368.6 bits (945), Expect = 3.0e-98
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFSSHEEMR PVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIP APIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA
Sbjct: 121 EKFIPLAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of Carg01844 vs. NCBI nr
Match: XP_022150691.1 (uncharacterized protein LOC111018762 [Momordica charantia])

HSP 1 Score: 335.9 bits (860), Expect = 2.2e-88
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPFAPI ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180

[Close]

BLAST of Carg01844 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 5.9e-100
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of Carg01844 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFSSHEEMR PVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS
Sbjct: 1   MNHCAILSNAFSSHEEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIP APIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA
Sbjct: 121 EKFIPLAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 179

[Close]

BLAST of Carg01844 vs. ExPASy TrEMBL
Match: A0A6J1DC97 (uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018762 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 163/180 (90.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSN FS HEEMR  VPGPISDLRDQ+VCPKPRRLSN KVTV GHAD+SLRWNL 
Sbjct: 1   MNHCAILSNTFSGHEEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNLC 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVEQIDMA GPDLLDFLLT+ GCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD
Sbjct: 61  HQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120

Query: 121 EKFIPFAPI-ASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPFAPI ASPS QLSPSTASRKGGRVRA+FGNKP VRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFAPIAASPSVQLSPSTASRKGGRVRANFGNKPAVRIEGFDCLDRDRQNCSIPAFA 180

[Close]

BLAST of Carg01844 vs. ExPASy TrEMBL
Match: A0A5D3CB96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001020 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.0e-85
Identity = 157/179 (87.71%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFS HEEMR  VP PISD RDQLVCPKPRRL     TV  H+D+SLRWNLS
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVE IDMA GPDLLDFLLT+GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPF PIASPSGQLSPST+SRKGGRVRASFGNKPTVRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of Carg01844 vs. ExPASy TrEMBL
Match: A0A1S3BG95 (uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.0e-85
Identity = 157/179 (87.71%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHCAILSNAFS HEEMR  VP PISD RDQLVCPKPRRL     TV  H+D+SLRWNLS
Sbjct: 1   MNHCAILSNAFSGHEEMRTSVPCPISDFRDQLVCPKPRRL-----TVNAHSDTSLRWNLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
           HQVE IDMA GPDLLDFLLT+GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF +
Sbjct: 61  HQVEPIDMAAGPDLLDFLLTKGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFRE 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPAFA 180
           EKFIPF PIASPSGQLSPST+SRKGGRVRASFGNKPTVRIEGFDC DRDRQNCSIPAFA
Sbjct: 121 EKFIPFTPIASPSGQLSPSTSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA 174

[Close]

BLAST of Carg01844 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 151.4 bits (381), Expect = 7.0e-37
Identity = 86/186 (46.24%), Postives = 111/186 (59.68%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNH A+  NAF++  ++R+     +   +  +VCPKPRR+         H   SLR   S
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRNNH--HHPSRSLRCYFS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSP-PFLCGSPPSRVANPLIQDARFG 120
           HQ+E  +     D+LD +LT+ G   +Q   Q+  SP PFLCGSPPSRVANPL QDARF 
Sbjct: 61  HQLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARFR 120

Query: 121 DEKFIPFAPIASPSGQLSP-----STASRKGG-RVRASFGNKPTVRIEGFDCRDRDRQNC 180
           DE  +  + +  P   L P     S++ RKGG  VR +FGN P VR+EGFDC DRD +NC
Sbjct: 121 DE-IVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDCLDRDSRNC 180

[Close]

BLAST of Carg01844 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 88/180 (48.89%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHC++  NAF S EE R  VP   S   D +VCPKPRR +N    VI      L ++LS
Sbjct: 1   MNHCSLQQNAFLSREESRGFVP-IYSHPVDSVVCPKPRRANN----VI--RPFRLHFSLS 60

Query: 61  HQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFGD 120
              +  D   G DLLD    +   S        + SPPF  GSPPSR ANPL QDARFGD
Sbjct: 61  GADDVCDSKAGEDLLDIFRRKESVS--------SRSPPFFLGSPPSRAANPLAQDARFGD 120

Query: 121 EKFIPFAPIASPSGQLSPSTASRKGGRVRASFGNKP-TVRIEGFDCRDRDRQNCSIPAFA 180
           EK    +P  SP   L PS +  K G  R  FG KP TVR+EGFDC +RDR N SIPA A
Sbjct: 121 EKLNTVSPSLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIPAMA 162

[Close]

BLAST of Carg01844 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 80/185 (43.24%), Postives = 108/185 (58.38%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MN C I  NAF   EEMR      +SD RD ++CPKPRR+      +  H+  SLRW L+
Sbjct: 2   MNSCGIQQNAF---EEMRR--NAAVSDRRDAVICPKPRRVG----ALNHHSSRSLRWQLN 61

Query: 61  HQVEQIDMATGPDLLDFLLTR-GGCSVDQSFTQLASSPP-FLCGSPPSRVANPLIQDARF 120
           HQ+E  +  +G ++LDF+LT+ GG   +Q  T+   +PP F  GSPPSRV+NPL +D+ F
Sbjct: 62  HQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF 121

Query: 121 GDEKFIPFAPIASP--SGQLSPSTASRKGGRVRA--SFGNKPTVRIEGFDCRDRDRQNCS 180
            +E  +  +P  S   + +  P ++ R G  V A  SFGN P VR+ GFDC DR   N S
Sbjct: 122 REELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRS 176

[Close]

BLAST of Carg01844 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 80/185 (43.24%), Postives = 108/185 (58.38%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MN C I  NAF   EEMR      +SD RD ++CPKPRR+      +  H+  SLRW L+
Sbjct: 2   MNSCGIQQNAF---EEMRR--NAAVSDRRDAVICPKPRRVG----ALNHHSSRSLRWQLN 61

Query: 61  HQVEQIDMATGPDLLDFLLTR-GGCSVDQSFTQLASSPP-FLCGSPPSRVANPLIQDARF 120
           HQ+E  +  +G ++LDF+LT+ GG   +Q  T+   +PP F  GSPPSRV+NPL +D+ F
Sbjct: 62  HQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLF 121

Query: 121 GDEKFIPFAPIASP--SGQLSPSTASRKGGRVRA--SFGNKPTVRIEGFDCRDRDRQNCS 180
            +E  +  +P  S   + +  P ++ R G  V A  SFGN P VR+ GFDC DR   N S
Sbjct: 122 REELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNRS 176

[Close]

BLAST of Carg01844 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.7e-30
Identity = 85/191 (44.50%), Postives = 107/191 (56.02%), Query Frame = 0


Query: 1   MNHCAILSNAFSSHEEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNLS 60
           MNHC +  NAF S EEM         D +D +VCPKPRR+      VI      LR ++S
Sbjct: 67  MNHCNLQQNAFMSREEMMG------FDRKDLVVCPKPRRVGLLANNVI----RPLRLHMS 126

Query: 61  HQVEQI-DMATGPDLLDFLLTR-GGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF 120
                + D   G +LL+ +  +    ++ Q    L+SSPP+  GSPPSR ANPL QDARF
Sbjct: 127 QAAADLCDSKAGAELLEIIRRKEDNGTIGQ---LLSSSPPYFPGSPPSRAANPLAQDARF 186

Query: 121 GDEKFIPFAPIA------SPSGQLSPSTASRKG---GRVRASFG-NKPTVRIEGFDCRDR 180
            DEK  P +P +      S +G  SPS++S      G VR  FG N P VR+EGFDC +R
Sbjct: 187 RDEKLNPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNR 244

The following BLAST results are available for this feature:

BLAST of Carg01844 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957437.1	1.2e-99	100.00	uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothet...	[more]
KAG6601286.1	1.2e-99	100.00	hypothetical protein SDJN03_06519, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023517111.1	1.0e-98	98.88	uncharacterized protein LOC111780963 [Cucurbita pepo subsp. pepo]	[more]
XP_022986983.1	3.0e-98	98.88	uncharacterized protein LOC111484540 [Cucurbita maxima]	[more]
XP_022150691.1	2.2e-88	90.56	uncharacterized protein LOC111018762 [Momordica charantia]	[more]

BLAST of Carg01844 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg01844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ47	5.9e-100	100.00	uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JI50	1.5e-98	98.88	uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540...	[more]
A0A6J1DC97	1.0e-88	90.56	uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CB96	7.0e-85	87.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BG95	7.0e-85	87.71	uncharacterized protein LOC103489287 OS=Cucumis melo OX=3656 GN=LOC103489287 PE=...	[more]

BLAST of Carg01844 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	7.0e-37	46.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	1.4e-32	48.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.1	2.2e-30	43.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	2.2e-30	43.24	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	3.7e-30	44.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..179
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01844-RA	Carg01844-RA	mRNA