Carg01686 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01686
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ras-related protein
Location	Carg_Chr15: 2546060 .. 2550259 (-)
RNA-Seq Expression	Carg01686
Synteny	Carg01686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGTCGTTTTTACGCGAGACAACGCTGTTCTTCTTCGCGATTGAATTGAAAGCAGAATTGTGAAACATTGGGGAATTCTTGGCGGCCATTAACGAACCAGTCCCGAAGGCGCAAGCTTATTCTTCTCTTTTGCAGTATTCTCCAATTGTTGCGTGGACTCCACGAAAGTTCAATTGGCGGATAAGTGCTTGGATCGGTTATTTTAGATATCCTTGATCGCCATGGGCTGCTCCTCGTCTCTCCCTGGTATTTTTTTCTCGAATTTCGTTGCTCAAGATTTGCTAGGGTTTTCAGATTCTTTATTCGTCTATTTAAGTCCGATCAAAGCGGTGCTGTATTGAGAATTTCGGAGGTCGATTGTTTGGTCTGTTTCGTGTTGTTAATTATGGAGTTTTCTCGATTCCTTGATTTTCTTTAACGGGCGCATTAGGGTTTCGTGGGTTTCAGTTTCTACTTTTTCTTATAGAAGTTTATGTCGAGTTTCAATGATTTTTTGGGGGTTTATAATGCAGACAGGGCTTCTGGGCGATCGGGTGTGCTTAATCCAGAGAACAATGCAGCTGATTCCAAGAATTTGCGCGTAAAGGTGTTGAGATGCAAAGCTTATTCACTTGTAATCCGATTCTTTTTAGTGTTAATGGAATAAGACCCCTTAAGTGAGTTCGATGATAGTCTGATAGTTGGTATTTGTTGACTTACAATTCTTTCCTGTATGAAGACAAACATAGGATGGCTAAGATGAAACAATGCTATTTTTAATTTAATGAGTTTTGAAGTTAAATACTGTGCTTACTTAGGAAGCTTAAAAGTTTTTATGATGTATTTTTTTAACATTCTTCTCTTTCTGACTTTATGCAGCTTGTCCTGCTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCAACGTCTAAGGTCAGAACTATGTTACAGTCCATAAATTCTTAAAATAAATCTATGCTCAATACAAATTAATTTACGCTTTTATCATTCCATTCCCGAAGGAAACACAATCGTTTGATTCGACATGTTTGTTGAGAAAATTCAGGTTACTGTTGGAGCATCATTCTTGTCACAAACGATAGCTTTACAAGATTCCACGACAGTGAAATTTGAAATATGGGATACCGCTGGGCAAGAGAGGTAGGACCATCTTAATCTCTAGTTGATCCTCGAACATGTGTTTTTAACTTCTTAGCAAGTAGCCTTATTCTCATTGGTAGCCATTTTCTAGCTTACTTCGTGTTTGCAAGAGATTTTTGTTGCAAAAGGTTATCACTGTTGATTTGTCTTGATTTAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCTCAGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGTAAGTTAAGTAGTTTTTGTACTATATTTATTGCTTGTGATTGCTGTATCGATTCAAGTCCAAATTGTATCCATGGGCCTTTTACTTGCGATGATCTTGTTTCATAGTCATCATGCATAAATGAAGCTATAACTATGAGGCAATTCCTCATTAGTTGAATATCCCATTCATTGATGACCAAATTTGGAACAAAGGGGAATTCTTTTTAATCTATGGGAAGATTCATTGATGACCAAAGTTCCGTCCCACTTTTAAAATATCAACAAAATTGTAACAGCCATAGCGCACCACTAGTAGATGTTGTCCTCTTTGGGCTTAACCTTTTGGGCTTCCCCTCAAGGTTTTAAAATGCTAGGGAGAGGTTTCCACACCCTTATAAGGAATACTTTGTTCCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCTCTTGGGACACTGCCCGGTGTCTGCCTCTGATATCATTTGTAACGGCTCTAGCCCACAGCTAGCAGATATTGTCATTTTTGGGCTTTCCCTTTTGGGTTTCCTCTCAAGGTTTTAAGACACGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCATTCCACTCTCGAACCAATGTGAGATCTCACAAAGATTCTCACGAGTGGGGTGGTTTTTTTCTCTTTTCTTTCTTCCCTTTTATGCAATTAGTTGTTTGTTTTAAAAATCAACCCATCCATGCCCTATGCACAATTGGTTGTTAAAAGCTTATGGCTCTTTTGAGTTGAAAATTATATTAAAAAGGTTGAGTTTAAAAGGTTGAGTTTGATCTAATGTGTTCGTTCATTTTGATTGGGTGTTCCTTTGAGCTTTGACTAATTCACAATCTTCATGATTCATATTGGGCATATTGGGCACTTACAGGAGCTACAGAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCCGATCTTCTAGAGAAAAGAAAAGTATCTGTTCAGGTAAATTCAGTGTTATTCAATCAAATGGCGTCTTGCAAAATGGGGAAAAGATCTTGTAACTCACTAATATGAGATACTTATGTTTCACTTTGGAAGGATGGAACGGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGTATTCCTGATTTTATCCTTTTCGTATGACTTTCATAGATGCTGTTGGTATATAAGTTTGTATAGCGATTTTTATGATATTCCATAGTTTGAAGAGCGGTATTAAACAGTTTTAATTATTTTCTACCATCCCATAGTGCACGTTGACGTTTAGAAGTTCAGAATCTGCTTTAGTCATTGTCATAGCCAGAAATCTTCATAATATTCATTAGAGTTGCGGAACTTTAGCAGACCAATTCTCAATTGGTAATTGAAATCCAGAAGATGTGAAGTTCGAACGTTCTTTCACCCCACCTTCTTGTATGGTGGTTGTATCTATCATTATGCTAGCTCCATAAGGCGTCGAACGTTCACCTTAAATCTCTATCGGTGGTTCTATATTGTCACGATTGCTCAACGCCACCATTAAAATGGTGGCTCGCTGGAGGTCAAGTTCAGTTGGAATTTTTCTGACTGTTACCTCTTAGCTGATTTGTTGTCTGTTTGGACTAGAATGTTCTTTCGCCTATCTCTCTAATTCGTGCGTGCTCGTTCGGATGCTTTATGAAATAGCTAGTTGTTAGGATTTTTTTTATACGACCGACCTTTTTGTTGAGAAAATGGACTAGTCCTCTGATAATTAGTTATTTTGTATACTTTACCCGAAAATTGAAATGTTTGAGAAATACACTTCGTGGCTTGAATTATGTGAAGACGTTCGATAGTTTTGTCGTGATCACTTAGCTGAGACCCTGTCTCCCTTTCATACAACGCTTCTCTAGAAACACATTTCACCAAATGTTTAAGATCCATGGCTTTGTAGATTTCACCAAATGTTTCCATTCATAAATACATTTCAATATCAAACATTTCTTCTTTATTTGATTTGGCAGGAGATAGCGAAGCGCTTGCCACGACCAACTTCCTCGTGATCTTGCCGTGACGTGAATGATTTTATCAGCAGCAGCAGCAGCAGCAGCAGCTTAATTTTCAGTAAATCAGCTTGCTCCCATGTGATCTGTGTATAGTTGGGTGAGTCCTGCAGCCTTATGCTTTGTTATTTGATTTGACTTGTTGATATCTTAAATCTAAAAAGTGTAACATTAAACAGATATGAAAATGGTGAAAAGATTCATTCCCCCTTTAAATCACAAACTGCATTTGTAAACTATATCTGCTGTGACTGATAGAATCATTACTTAGCTTATTTTCCTCTTTCTTTTAGATAGAATTTAGTTGGAGTGGATAAACTGAAACTCTATATGCAATCTCTAAGTCCATTGAAGGGATCGAATTGGGCACGCATTTCTATGTGGATGGGTTTATCTTGTGAGTCTCCCGAGTGAATAATTTGAATCTGTGATCTTTTAGTTGATAGTATATAGTCTATGTCAGTTGAAATATGCTTATGTTCGTGGAAAGCTTTTAGAATATTCCGAACTCAGCCAAATGCTTTCATCACTTGATCATGATTCATGTCGATCTTGCAACCATAGAATCGTTTAGTGATCCCTCGACCTCTCTTTTTCTTGTTTCTTTTCTGGTAATCTAATTAGAAGATATATATTCTGGGTTCGAAGTTTTCCATTTAGTTCTAATTTAATTTCTATAATTCC

mRNA sequence

CGTGTCGTTTTTACGCGAGACAACGCTGTTCTTCTTCGCGATTGAATTGAAAGCAGAATTGTGAAACATTGGGGAATTCTTGGCGGCCATTAACGAACCAGTCCCGAAGGCGCAAGCTTATTCTTCTCTTTTGCAGTATTCTCCAATTGTTGCGTGGACTCCACGAAAGTTCAATTGGCGGATAAGTGCTTGGATCGGTTATTTTAGATATCCTTGATCGCCATGGGCTGCTCCTCGTCTCTCCCTGACAGGGCTTCTGGGCGATCGGGTGTGCTTAATCCAGAGAACAATGCAGCTGATTCCAAGAATTTGCGCGTAAAGCTTGTCCTGCTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCAACGTCTAAGGTTACTGTTGGAGCATCATTCTTGTCACAAACGATAGCTTTACAAGATTCCACGACAGTGAAATTTGAAATATGGGATACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCTCAGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGAGCTACAGAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCCGATCTTCTAGAGAAAAGAAAAGTATCTGTTCAGGATGGAACGGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAGATAGCGAAGCGCTTGCCACGACCAACTTCCTCGTGATCTTGCCGTGACGTGAATGATTTTATCAGCAGCAGCAGCAGCAGCAGCAGCTTAATTTTCAGTAAATCAGCTTGCTCCCATGTGATCTGTGTATAGTTGGGTGAGTCCTGCAGCCTTATGCTTTGTTATTTGATTTGACTTGTTGATATCTTAAATCTAAAAAGTGTAACATTAAACAGATATGAAAATGGTGAAAAGATTCATTCCCCCTTTAAATCACAAACTGCATTTGTAAACTATATCTGCTGTGACTGATAGAATCATTACTTAGCTTATTTTCCTCTTTCTTTTAGATAGAATTTAGTTGGAGTGGATAAACTGAAACTCTATATGCAATCTCTAAGTCCATTGAAGGGATCGAATTGGGCACGCATTTCTATGTGGATGGGTTTATCTTGTGAGTCTCCCGAGTGAATAATTTGAATCTGTGATCTTTTAGTTGATAGTATATAGTCTATGTCAGTTGAAATATGCTTATGTTCGTGGAAAGCTTTTAGAATATTCCGAACTCAGCCAAATGCTTTCATCACTTGATCATGATTCATGTCGATCTTGCAACCATAGAATCGTTTAGTGATCCCTCGACCTCTCTTTTTCTTGTTTCTTTTCTGGTAATCTAATTAGAAGATATATATTCTGGGTTCGAAGTTTTCCATTTAGTTCTAATTTAATTTCTATAATTCC

Coding sequence (CDS)

ATGGGCTGCTCCTCGTCTCTCCCTGACAGGGCTTCTGGGCGATCGGGTGTGCTTAATCCAGAGAACAATGCAGCTGATTCCAAGAATTTGCGCGTAAAGCTTGTCCTGCTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCAACGTCTAAGGTTACTGTTGGAGCATCATTCTTGTCACAAACGATAGCTTTACAAGATTCCACGACAGTGAAATTTGAAATATGGGATACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCTCAGATTCCTTCGCCAAAGCACAATATTGGGTTAAGGAGCTACAGAAGCATGGCAGCCCTGATATCATTTTGGCATTGGTCGGTAACAAAGCCGATCTTCTAGAGAAAAGAAAAGTATCTGTTCAGGATGGAACGGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAGATAGCGAAGCGCTTGCCACGACCAACTTCCTCGTGA

Protein sequence

MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPRPTSS

Homology

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BLAST of Carg01686 vs. NCBI nr
Match: XP_022939911.1 (ras-related protein RABF1-like [Cucurbita moschata] >XP_022993727.1 ras-related protein RABF1-like [Cucurbita maxima] >XP_023549512.1 ras-related protein RABF1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549513.1 ras-related protein RABF1-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6578812.1 Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016336.1 Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. NCBI nr
Match: XP_038884272.1 (ras-related protein RABF1 [Benincasa hispida])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. NCBI nr
Match: XP_008456515.1 (PREDICTED: ras-related protein RABF1 [Cucumis melo])

HSP 1 Score: 381.3 bits (978), Expect = 5.0e-102
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. NCBI nr
Match: XP_004140073.1 (ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa_002805 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 1.1e-101
Identity = 194/199 (97.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKV+VQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. NCBI nr
Match: XP_022956144.1 (ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032982.1 Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.5 bits (968), Expect = 7.2e-101
Identity = 193/199 (96.98%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASG SG +NPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. ExPASy Swiss-Prot
Match: Q9CB01 (Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 3.9e-89
Identity = 171/201 (85.07%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MGCSSSLPDRASGR-SGVLNPENNA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SSLPDR SG  SG+ N EN   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSD 120
           TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKT 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKR+V  +DG E AEKNGMFFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFEEIAKRLPRPTSS 200
           ADNIN+LFEEI KRLPRP  S
Sbjct: 181 ADNINQLFEEIGKRLPRPAPS 201

[Close]

BLAST of Carg01686 vs. ExPASy Swiss-Prot
Match: Q58DS9 (Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58
Identity = 111/184 (60.33%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAK 191
           +  SP+I++AL GNKADL  KR V  Q+   YAE N + F+ETSAKTA N+NE+F  IAK
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 RLPR 196
           +LP+
Sbjct: 182 KLPK 184

[Close]

BLAST of Carg01686 vs. ExPASy Swiss-Prot
Match: P51147 (Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 110/184 (59.78%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAK 191
           +  SP+I++AL GNKADL  KR V  Q+   YA+ N + F+ETSAKTA N+NE+F  IAK
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 RLPR 196
           +LP+
Sbjct: 182 KLPK 184

[Close]

BLAST of Carg01686 vs. ExPASy Swiss-Prot
Match: P51148 (Ras-related protein Rab-5C OS=Homo sapiens OX=9606 GN=RAB5C PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 110/184 (59.78%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAK 191
           +  SP+I++AL GNKADL  KR V  Q+   YA+ N + F+ETSAKTA N+NE+F  IAK
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 RLPR 196
           +LP+
Sbjct: 182 KLPK 184

[Close]

BLAST of Carg01686 vs. ExPASy Swiss-Prot
Match: P35278 (Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-58
Identity = 110/184 (59.78%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 12  SGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +GR G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT++D+FA+A+ WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAK 191
           +  SP+I++AL GNKADL  KR V  Q+   YA+ N + F+ETSAKTA N+NE+F  IAK
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 RLPR 196
           +LP+
Sbjct: 182 KLPK 184

[Close]

BLAST of Carg01686 vs. ExPASy TrEMBL
Match: A0A6J1JTN6 (ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489640 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 8.9e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. ExPASy TrEMBL
Match: A0A6J1FH43 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111445632 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 8.9e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. ExPASy TrEMBL
Match: A0A1S3C444 (ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.4e-102
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. ExPASy TrEMBL
Match: A0A0A0KJ92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.4e-102
Identity = 194/199 (97.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASGRSG LNPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKV+VQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. ExPASy TrEMBL
Match: A0A6J1GY77 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.5e-101
Identity = 193/199 (96.98%), Postives = 196/199 (98.49%), Query Frame = 0


Query: 1   MGCSSSLPDRASGRSGVLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGCSSS+PDRASG SG +NPEN+AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120
           KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180
           AKAQYWVKELQKHGSPDIILALVGNKADL EKRKVSVQDGTEYAEKNGMFFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEIAKRLPRPTSS 200
           NINELFEEIAKRLPRPTSS
Sbjct: 181 NINELFEEIAKRLPRPTSS 199

[Close]

BLAST of Carg01686 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 328.9 bits (842), Expect = 2.7e-90
Identity = 171/201 (85.07%), Postives = 181/201 (90.05%), Query Frame = 0


Query: 1   MGCSSSLPDRASGR-SGVLNPENNA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SSLPDR SG  SG+ N EN   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSD 120
           TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKT 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKR+V  +DG E AEKNGMFFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFEEIAKRLPRPTSS 200
           ADNIN+LFEEI KRLPRP  S
Sbjct: 181 ADNINQLFEEIGKRLPRPAPS 201

[Close]

BLAST of Carg01686 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 311.6 bits (797), Expect = 4.5e-85
Identity = 162/189 (85.71%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MGCSSSLPDRASGR-SGVLNPENNA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MGC+SSLPDR SG  SG+ N EN   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSD 120
           TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAQYWVKELQKHGSPDIILALVGNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKT 180
           SF KAQYWVKELQKHGSPDI++ALVGNKADL EKR+V  +DG E AEKNGMFFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFE 188
           ADNIN+LFE
Sbjct: 181 ADNINQLFE 189

[Close]

BLAST of Carg01686 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-57
Identity = 104/172 (60.47%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           AA +K++  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D+ TVKF
Sbjct: 3   AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A+IV+D+T+  SF +A+ WV+ELQ  G+P++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 122

Query: 144 GNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
           GNK+DLL+ RKV+ +D   YA++NG+FF+ETSAKTA N+ E+F EIA+RLPR
Sbjct: 123 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173

[Close]

BLAST of Carg01686 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 216.5 bits (550), Expect = 2.0e-56
Identity = 104/172 (60.47%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           ++ +KN+  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D+ TVKF
Sbjct: 3   SSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A+IV+DIT+  SF +A+ WV+ELQ  G+P++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALA 122

Query: 144 GNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 196
           GNKADLL+ RKVS ++   YA++N +FF+ETSAKTA N+ ++F EIAKRLPR
Sbjct: 123 GNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPR 173

[Close]

BLAST of Carg01686 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 162.2 bits (409), Expect = 4.4e-40
Identity = 80/171 (46.78%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKF 83
           A+ S   + KLV LGD  VGK+ I+ RF+  +FD T + T+G  FLS+T+ L+D  TV+ 
Sbjct: 2   ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRL 61

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVKELQKHGSPDIILALV 143
           ++WDTAGQER+ +L P Y R ++VAV+VYD+ +  SF     W++E++   + D+I+ LV
Sbjct: 62  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 121

Query: 144 GNKADLLEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 195
           GNK DL+EKR+VS+++G     + G+ FIETSAK   NI  LF +IA  LP
Sbjct: 122 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALP 171

The following BLAST results are available for this feature:

BLAST of Carg01686 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939911.1	1.8e-104	100.00	ras-related protein RABF1-like [Cucurbita moschata] >XP_022993727.1 ras-related ...	[more]
XP_038884272.1	1.3e-102	98.49	ras-related protein RABF1 [Benincasa hispida]	[more]
XP_008456515.1	5.0e-102	97.99	PREDICTED: ras-related protein RABF1 [Cucumis melo]	[more]
XP_004140073.1	1.1e-101	97.49	ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa...	[more]
XP_022956144.1	7.2e-101	96.98	ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related pr...	[more]

BLAST of Carg01686 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CB01	3.9e-89	85.07	Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1	[more]
Q58DS9	2.1e-58	60.33	Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1	[more]
P51147	4.6e-58	59.78	Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1	[more]
P51148	4.6e-58	59.78	Ras-related protein Rab-5C OS=Homo sapiens OX=9606 GN=RAB5C PE=1 SV=2	[more]
P35278	4.6e-58	59.78	Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2	[more]

BLAST of Carg01686 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTN6	8.9e-105	100.00	ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489640 PE=4 ...	[more]
A0A6J1FH43	8.9e-105	100.00	ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111445632 PE=...	[more]
A0A1S3C444	2.4e-102	97.99	ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1	[more]
A0A0A0KJ92	5.4e-102	97.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1	[more]
A0A6J1GY77	3.5e-101	96.98	ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=...	[more]

BLAST of Carg01686 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54840.1	2.7e-90	85.07	Ras-related small GTP-binding family protein	[more]
AT3G54840.2	4.5e-85	85.71	Ras-related small GTP-binding family protein	[more]
AT4G19640.1	4.0e-57	60.47	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	2.0e-56	60.47	RAB homolog 1	[more]
AT2G22290.1	4.4e-40	46.78	RAB GTPase homolog H1D	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 32..53 score: 50.56 coord: 136..149 score: 49.71 coord: 55..71 score: 27.15 coord: 171..193 score: 39.69 coord: 74..96 score: 46.44
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 32..196 e-value: 6.1E-80 score: 281.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 33..196 e-value: 2.7E-27 score: 106.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 15..198
None	No IPR available	PANTHER	PTHR47978:SF10	RAB FAMILY GTPASE	coord: 15..198
None	No IPR available	PROSITE	PS51419	RAB	coord: 27..199 score: 32.54039
None	No IPR available	PROSITE	PS51420	RHO	coord: 25..197 score: 9.11594
None	No IPR available	CDD	cd01860	Rab5_related	coord: 31..194 e-value: 9.94717E-111 score: 311.408
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 34..196 e-value: 1.2E-12 score: 42.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 33..193 e-value: 4.9E-58 score: 195.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 25..199 score: 16.506392
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 32..189 e-value: 3.1E-27 score: 93.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 22..199 e-value: 1.8E-65 score: 222.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 28..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01686-RA	Carg01686-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045022	early endosome to late endosome transport
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0010009	cytoplasmic side of endosome membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005769	early endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding