Carg01341 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01341
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein, putative isoform 1
LocationCarg_Chr15: 4599497 .. 4601806 (+)
RNA-Seq ExpressionCarg01341
SyntenyCarg01341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTCTTCTTTCGCGGTCTTTTTCAAGTTAGTCGCAGAGCCTCTTACCGAGTAATCTCTCTGTCTTCAAATTCCTCGCATCCGGGTTGCCTTTCTTTCAATGCATTTAATGCCTCGTCATCCCTAACATCAATAAATGGCTGTTACATTTCTTGTCTTTGGTTCGCTAGCTTTCTTTGTATATTTCGGCTCCCTTTTGTTAGTTACTCGAATACAAATAGTTCATTTGAATCATTAGACATTGGTTCCCTTCGTAAAATCATACAACAGGACCTCTGGAACGATCCTAAGATTGTTATTTTATTTGATTCAGCACTCGCGCCCATTTGGGTCTCTAAGATTTTAGTTGAATTGAAAGAAGATCCAAAGTTAGCTCTTAAGTTCTTCAAATGGGCAGGAAGCCAGATTGGTTTCTGCCATACCACCGAGTCTTACTGCATTATAGCTCACATGCTGTTTTGTGCGAGAATGTATATGAATGCCCATGATATTATTAAAGAAGTGATTTTGAAGTGTCGTATCGACATGACTTTTCCTGTTTGTAATATATTTGATATGTTATGGTCGACTAGGAATGTTTGTGTGTCAGGAACAGGAGTCTTTGACATTTTATTTAGTGTTCTGGTAGAGTTGGGTCTGCTTGAGGAAGCTAATGAATGTTTCTCGAGAATGAGGAAGTTTAGGACTCTTCCCAAAGCACGTTCATGCAATTTTCTTTTGCATAGATTATCAAAGTCGGGTAATGGACAGTTGGTGAAGAAGTTTTTCAATGATATGATTGGGGCTGGGATCGCACCTTCTGTTTTTACTTACAATGTAATGATAGATTACTTGTGCAAAGAAGGGGATTTGGAAAACGCTAGACGTTTGTTTGTGCAAATGAGGCAAATGGGCTTTTCTCCAGATGTTGTCACCTATAATTCCTTGATTGATGGCTATGGCAAGGTTGGTTTACTAGAAGAATCTGTGTATTTATTTGAAGAAATGAAGGATATCGGTTGTGTTCCTGACGTAATTACTTATAATGCGTTGATCAATTGTTTTTGTAAGTTTGAGAAGATGCCTCGAGCTTTTGAGTATCTCTCTGAGATGAAGAACAATGGGTTAAAACCAAATGTTGTAACATATAGCACATTGATTGATGCTTTTTGCAAGGAGGGAATGATGCAATATGCCATCAAACTTTTTGTTGATATGAGAAGAGTTGGCCTGCTACCTAATGAATTCACCTACACTTCTCTGATTGATGCCAATTGTAAGGCAGGTAACTTAACAGAAGCATGGAAGTTGTCCAACGATATGTTGCAGGCAGGATTTAATTTAAATGTAGTAACCTATACAGCTCTAATGGATGGGCTTTGTGAAGATGGAAGAATGATGGAAGCGGAAGAAGTGTTTAGGGCAATGCTGAAAGATGGACTATCGCCCAACCAGCAGGTTTACACTGCTTTGGTTCATGGCTATATTAAGGCAGAGAGAATGGAGGATGCAATGGAAACATTGAAGCAAATGACAGAATGTAACATCAAACCGGATTTAATACTCTATGGCACCATTATTTGGGGTCTCTGTAGTCAAAACAAACTTGAAGAATCTAAACTTATTATTAAAGAAATGAAAAGTCAGGGTATTAGTGCAAATCCTGTTATATACACAACAATTATGGATGCTTATTTTAAGGCTGGAAAAGGCTCAGATGCAATAAATCTTCTTCATAAGATGCAGGATATGGGTGTTGAGGCTACTGTTGTAACCTACTGTGTACTAATTGATGGTTTGTGCAAAACAGGTATGGTCGAACTGGCAGTTGATTATTTTGGTAGAATGTCTGATCTTGGTTTACAACCTAATGTTGCAGTTTATACGGCCCTTATTGATGGTCTTTGTAAAACTAATTGCATTGAGTCTGCCAAAAAGTTGTTTGATGAAATGCAATATAGGGGTATGACCCCAGATAAAACAGCTTTTACTGCTCTTATTGATGGCAACTTGAAGCTTGGAAATCTTCAGGAAGCTTTGGATTTGATTAGCAGAATGACAGACTTAGCTATTGAGTTTGATTTACATGCTTATACCTCCATGGTTTCGGGATTTTCTCAATGTGGTGACCTGCATCAAGCGAGGAAGTTTTTTAATGAAATGATTGAGAAAGGCATACTTCCCGAGGAGATTTTATGTACATGTCTACTGAGAGAGTATTACAAGCTTGGACAGTTGGACGAAGCCATTGAATTGAAGAATGAAATGAGAAGGAGGGGTTTAATTACTGAAAACTGTAGCCTTGGAGTTCCCAGTCTTAGAACTTGA

mRNA sequence

ATGCTACTCTTCTTTCGCGGTCTTTTTCAAGTTAGTCGCAGAGCCTCTTACCGAGACCTCTGGAACGATCCTAAGATTGTTATTTTATTTGATTCAGCACTCGCGCCCATTTGGGTCTCTAAGATTTTAGTTGAATTGAAAGAAGATCCAAAGTTAGCTCTTAAGTTCTTCAAATGGGCAGGAAGCCAGATTGGTTTCTGCCATACCACCGAGTCTTACTGCATTATAGCTCACATGCTGTTTTGTGCGAGAATGTATATGAATGCCCATGATATTATTAAAGAAGTGATTTTGAAGTGTCGTATCGACATGACTTTTCCTGTTTGTAATATATTTGATATGTTATGGTCGACTAGGAATGTTTGTGTGTCAGGAACAGGAGTCTTTGACATTTTATTTAGTGTTCTGGTAGAGTTGGGTCTGCTTGAGGAAGCTAATGAATGTTTCTCGAGAATGAGGAAGTTTAGGACTCTTCCCAAAGCACGTTCATGCAATTTTCTTTTGCATAGATTATCAAAGTCGGGTAATGGACAGTTGGTGAAGAAGTTTTTCAATGATATGATTGGGGCTGGGATCGCACCTTCTGTTTTTACTTACAATGTAATGATAGATTACTTGTGCAAAGAAGGGGATTTGGAAAACGCTAGACGTTTGTTTGTGCAAATGAGGCAAATGGGCTTTTCTCCAGATGTTGTCACCTATAATTCCTTGATTGATGGCTATGGCAAGGTTGGTTTACTAGAAGAATCTGTGTATTTATTTGAAGAAATGAAGGATATCGGTTGTGTTCCTGACGTAATTACTTATAATGCGTTGATCAATTGTTTTTGTAAGTTTGAGAAGATGCCTCGAGCTTTTGAGTATCTCTCTGAGATGAAGAACAATGGGTTAAAACCAAATGTTGTAACATATAGCACATTGATTGATGCTTTTTGCAAGGAGGGAATGATGCAATATGCCATCAAACTTTTTGTTGATATGAGAAGAGTTGGCCTGCTACCTAATGAATTCACCTACACTTCTCTGATTGATGCCAATTGTAAGGCAGGTAACTTAACAGAAGCATGGAAGTTGTCCAACGATATGTTGCAGGCAGGATTTAATTTAAATGTAGTAACCTATACAGCTCTAATGGATGGGCTTTGTGAAGATGGAAGAATGATGGAAGCGGAAGAAGTGTTTAGGGCAATGCTGAAAGATGGACTATCGCCCAACCAGCAGGTTTACACTGCTTTGGTTCATGGCTATATTAAGGCAGAGAGAATGGAGGATGCAATGGAAACATTGAAGCAAATGACAGAATGTAACATCAAACCGGATTTAATACTCTATGGCACCATTATTTGGGGTCTCTGTAGTCAAAACAAACTTGAAGAATCTAAACTTATTATTAAAGAAATGAAAAGTCAGGGTATTAGTGCAAATCCTGTTATATACACAACAATTATGGATGCTTATTTTAAGGCTGGAAAAGGCTCAGATGCAATAAATCTTCTTCATAAGATGCAGGATATGGGTGTTGAGGCTACTGTTGTAACCTACTGTGTACTAATTGATGGTTTGTGCAAAACAGGTATGGTCGAACTGGCAGTTGATTATTTTGGTAGAATGTCTGATCTTGGTTTACAACCTAATGTTGCAGTTTATACGGCCCTTATTGATGGTCTTTGTAAAACTAATTGCATTGAGTCTGCCAAAAAGTTGTTTGATGAAATGCAATATAGGGGTATGACCCCAGATAAAACAGCTTTTACTGCTCTTATTGATGGCAACTTGAAGCTTGGAAATCTTCAGGAAGCTTTGGATTTGATTAGCAGAATGACAGACTTAGCTATTGAGTTTGATTTACATGCTTATACCTCCATGGTTTCGGGATTTTCTCAATGTGGTGACCTGCATCAAGCGAGGAAGTTTTTTAATGAAATGATTGAGAAAGGCATACTTCCCGAGGAGATTTTATGTACATGTCTACTGAGAGAGTATTACAAGCTTGGACAGTTGGACGAAGCCATTGAATTGAAGAATGAAATGAGAAGGAGGGGTTTAATTACTGAAAACTGTAGCCTTGGAGTTCCCAGTCTTAGAACTTGA

Coding sequence (CDS)

ATGCTACTCTTCTTTCGCGGTCTTTTTCAAGTTAGTCGCAGAGCCTCTTACCGAGACCTCTGGAACGATCCTAAGATTGTTATTTTATTTGATTCAGCACTCGCGCCCATTTGGGTCTCTAAGATTTTAGTTGAATTGAAAGAAGATCCAAAGTTAGCTCTTAAGTTCTTCAAATGGGCAGGAAGCCAGATTGGTTTCTGCCATACCACCGAGTCTTACTGCATTATAGCTCACATGCTGTTTTGTGCGAGAATGTATATGAATGCCCATGATATTATTAAAGAAGTGATTTTGAAGTGTCGTATCGACATGACTTTTCCTGTTTGTAATATATTTGATATGTTATGGTCGACTAGGAATGTTTGTGTGTCAGGAACAGGAGTCTTTGACATTTTATTTAGTGTTCTGGTAGAGTTGGGTCTGCTTGAGGAAGCTAATGAATGTTTCTCGAGAATGAGGAAGTTTAGGACTCTTCCCAAAGCACGTTCATGCAATTTTCTTTTGCATAGATTATCAAAGTCGGGTAATGGACAGTTGGTGAAGAAGTTTTTCAATGATATGATTGGGGCTGGGATCGCACCTTCTGTTTTTACTTACAATGTAATGATAGATTACTTGTGCAAAGAAGGGGATTTGGAAAACGCTAGACGTTTGTTTGTGCAAATGAGGCAAATGGGCTTTTCTCCAGATGTTGTCACCTATAATTCCTTGATTGATGGCTATGGCAAGGTTGGTTTACTAGAAGAATCTGTGTATTTATTTGAAGAAATGAAGGATATCGGTTGTGTTCCTGACGTAATTACTTATAATGCGTTGATCAATTGTTTTTGTAAGTTTGAGAAGATGCCTCGAGCTTTTGAGTATCTCTCTGAGATGAAGAACAATGGGTTAAAACCAAATGTTGTAACATATAGCACATTGATTGATGCTTTTTGCAAGGAGGGAATGATGCAATATGCCATCAAACTTTTTGTTGATATGAGAAGAGTTGGCCTGCTACCTAATGAATTCACCTACACTTCTCTGATTGATGCCAATTGTAAGGCAGGTAACTTAACAGAAGCATGGAAGTTGTCCAACGATATGTTGCAGGCAGGATTTAATTTAAATGTAGTAACCTATACAGCTCTAATGGATGGGCTTTGTGAAGATGGAAGAATGATGGAAGCGGAAGAAGTGTTTAGGGCAATGCTGAAAGATGGACTATCGCCCAACCAGCAGGTTTACACTGCTTTGGTTCATGGCTATATTAAGGCAGAGAGAATGGAGGATGCAATGGAAACATTGAAGCAAATGACAGAATGTAACATCAAACCGGATTTAATACTCTATGGCACCATTATTTGGGGTCTCTGTAGTCAAAACAAACTTGAAGAATCTAAACTTATTATTAAAGAAATGAAAAGTCAGGGTATTAGTGCAAATCCTGTTATATACACAACAATTATGGATGCTTATTTTAAGGCTGGAAAAGGCTCAGATGCAATAAATCTTCTTCATAAGATGCAGGATATGGGTGTTGAGGCTACTGTTGTAACCTACTGTGTACTAATTGATGGTTTGTGCAAAACAGGTATGGTCGAACTGGCAGTTGATTATTTTGGTAGAATGTCTGATCTTGGTTTACAACCTAATGTTGCAGTTTATACGGCCCTTATTGATGGTCTTTGTAAAACTAATTGCATTGAGTCTGCCAAAAAGTTGTTTGATGAAATGCAATATAGGGGTATGACCCCAGATAAAACAGCTTTTACTGCTCTTATTGATGGCAACTTGAAGCTTGGAAATCTTCAGGAAGCTTTGGATTTGATTAGCAGAATGACAGACTTAGCTATTGAGTTTGATTTACATGCTTATACCTCCATGGTTTCGGGATTTTCTCAATGTGGTGACCTGCATCAAGCGAGGAAGTTTTTTAATGAAATGATTGAGAAAGGCATACTTCCCGAGGAGATTTTATGTACATGTCTACTGAGAGAGTATTACAAGCTTGGACAGTTGGACGAAGCCATTGAATTGAAGAATGAAATGAGAAGGAGGGGTTTAATTACTGAAAACTGTAGCCTTGGAGTTCCCAGTCTTAGAACTTGA

Protein sequence

MLLFFRGLFQVSRRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIELKNEMRRRGLITENCSLGVPSLRT
Homology
[Close]
BLAST of Carg01341 vs. NCBI nr
Match: KAG7016677.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1416.7 bits (3666), Expect = 0.0e+00
Identity = 696/696 (100.00%), Postives = 696/696 (100.00%), Query Frame = 0 

Query: 1   MLLFFRGLFQVSRRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWA 60
           MLLFFRGLFQVSRRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWA
Sbjct: 1   MLLFFRGLFQVSRRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWA 60

Query: 61  GSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRN 120
           GSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRN
Sbjct: 61  GSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRN 120

Query: 121 VCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLV 180
           VCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLV
Sbjct: 121 VCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLV 180

Query: 181 KKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDG 240
           KKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDG
Sbjct: 181 KKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDG 240

Query: 241 YGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPN 300
           YGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPN
Sbjct: 241 YGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPN 300

Query: 301 VVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSN 360
           VVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSN
Sbjct: 301 VVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSN 360

Query: 361 DMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAE 420
           DMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAE
Sbjct: 361 DMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAE 420

Query: 421 RMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYT 480
           RMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYT
Sbjct: 421 RMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYT 480

Query: 481 TIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDL 540
           TIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDL
Sbjct: 481 TIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDL 540

Query: 541 GLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEA 600
           GLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEA
Sbjct: 541 GLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEA 600

Query: 601 LDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLRE 660
           LDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLRE
Sbjct: 601 LDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLRE 660

Query: 661 YYKLGQLDEAIELKNEMRRRGLITENCSLGVPSLRT 697
           YYKLGQLDEAIELKNEMRRRGLITENCSLGVPSLRT
Sbjct: 661 YYKLGQLDEAIELKNEMRRRGLITENCSLGVPSLRT 696

[Close]
BLAST of Carg01341 vs. NCBI nr
Match: KAG6579158.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1377.8 bits (3565), Expect = 0.0e+00
Identity = 692/769 (89.99%), Postives = 694/769 (90.25%), Query Frame = 0 

Query: 1   MLLFFRGLFQVSRRASYR------------------------------------------ 60
           MLLFFRGLFQVSRRASYR                                          
Sbjct: 1   MLLFFRGLFQVSRRASYRVISLSSNSSHPGCLSFNAFNASSSLTSINGCYISCLWFASFL 60

Query: 61  -------------------------------DLWNDPKIVILFDSALAPIWVSKILVELK 120
                                          DLWNDPKIVILFDSALAPIWVSKILVELK
Sbjct: 61  CIFRLPFVSYSNTNSSFESLDIGSLRKIIQQDLWNDPKIVILFDSALAPIWVSKILVELK 120

Query: 121 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFP 180
           EDPKLALKFFKWAGSQIGFCHTTESYC+IAHMLFCARMY NAHDIIKEVILKCRIDM FP
Sbjct: 121 EDPKLALKFFKWAGSQIGFCHTTESYCVIAHMLFCARMYTNAHDIIKEVILKCRIDMIFP 180

Query: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240
           VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL
Sbjct: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240

Query: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF 300
           LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF
Sbjct: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF 300

Query: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE 360
           SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE
Sbjct: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE 360

Query: 361 YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420
           YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC
Sbjct: 361 YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420

Query: 421 KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ 480
           KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ
Sbjct: 421 KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ 480

Query: 481 VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM 540
           VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM
Sbjct: 481 VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM 540

Query: 541 KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 600
           KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV
Sbjct: 541 KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 600

Query: 601 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660
           ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCI+SAKKLFDEMQYRGMTPDKTAFTAL
Sbjct: 601 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIKSAKKLFDEMQYRGMTPDKTAFTAL 660

Query: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 697
           IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI
Sbjct: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 720

[Close]
BLAST of Carg01341 vs. NCBI nr
Match: XP_022938692.1 (putative pentatricopeptide repeat-containing protein At2g02150, partial [Cucurbita moschata])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 682/769 (88.69%), Postives = 689/769 (89.60%), Query Frame = 0 

Query: 1   MLLFFRGLFQVSRRASYR------------------------------------------ 60
           MLLFFRGLFQVSRRASYR                                          
Sbjct: 12  MLLFFRGLFQVSRRASYRVISLSSNSSHPGCLSFNAFNASSSLTSINGCYISCLWFASFL 71

Query: 61  -------------------------------DLWNDPKIVILFDSALAPIWVSKILVELK 120
                                          DLWNDPKIVILFDSALAPIWVSKILVELK
Sbjct: 72  CIFRLPFVSYSNTNSSFESLDIGSLRKIIQQDLWNDPKIVILFDSALAPIWVSKILVELK 131

Query: 121 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFP 180
           EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMY NAHDIIKEVILKCRIDM FP
Sbjct: 132 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYTNAHDIIKEVILKCRIDMIFP 191

Query: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240
           VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL
Sbjct: 192 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 251

Query: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF 300
           LHRLSKSGNGQLVK FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE+ARRLFVQMRQMGF
Sbjct: 252 LHRLSKSGNGQLVKNFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLESARRLFVQMRQMGF 311

Query: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE 360
           SPDVVTYNSLIDGYGKVGLLEESVYLF+EMKD+GCVPDVITYNALINCFCKFEKMPRAFE
Sbjct: 312 SPDVVTYNSLIDGYGKVGLLEESVYLFKEMKDVGCVPDVITYNALINCFCKFEKMPRAFE 371

Query: 361 YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420
           YLSEMKN+GLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC
Sbjct: 372 YLSEMKNSGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 431

Query: 421 KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ 480
           KAGNLTEAWKLSNDMLQAG NLNVV+YTALMDGLCEDGRMMEAEEVF+AMLKDGLSPNQQ
Sbjct: 432 KAGNLTEAWKLSNDMLQAGVNLNVVSYTALMDGLCEDGRMMEAEEVFKAMLKDGLSPNQQ 491

Query: 481 VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM 540
           VYTALVHGYIKAERMEDAME LKQMTECNIKPDLILYGTIIWGLCSQNKLEE+KLIIKEM
Sbjct: 492 VYTALVHGYIKAERMEDAMEILKQMTECNIKPDLILYGTIIWGLCSQNKLEETKLIIKEM 551

Query: 541 KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 600
           KSQGISANPVIYTTIMDAYFKAGK SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV
Sbjct: 552 KSQGISANPVIYTTIMDAYFKAGKSSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 611

Query: 601 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660
           ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL
Sbjct: 612 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 671

Query: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 697
           IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI
Sbjct: 672 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 731

[Close]
BLAST of Carg01341 vs. NCBI nr
Match: XP_023550125.1 (putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1353.2 bits (3501), Expect = 0.0e+00
Identity = 664/684 (97.08%), Postives = 672/684 (98.25%), Query Frame = 0 

Query: 13  RRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTES 72
           R+   +DLWNDPKIVILFDSALAPIWVSKILVELKEDPKLA KFFKWAGSQIGFCHTTES
Sbjct: 86  RKIIQQDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLAFKFFKWAGSQIGFCHTTES 145

Query: 73  YCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDIL 132
           YCIIAHMLFCARMY NAHDIIKEVILKCRIDM FP+CNIFDMLWSTRNVCVSGTGVFDIL
Sbjct: 146 YCIIAHMLFCARMYTNAHDIIKEVILKCRIDMIFPLCNIFDMLWSTRNVCVSGTGVFDIL 205

Query: 133 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGI 192
           FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLV+KFFNDMIGAGI
Sbjct: 206 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI 265

Query: 193 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 252
           APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY
Sbjct: 266 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 325

Query: 253 LFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 312
           LF+EMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKN+GLKPNVVTYSTLIDAFC
Sbjct: 326 LFKEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNSGLKPNVVTYSTLIDAFC 385

Query: 313 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 372
           KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV
Sbjct: 386 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 445

Query: 373 TYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQM 432
           TYTALM GLCEDGRMMEA EVFRAMLKDGLSPNQQV TALVHGYIKAERMEDAME LKQM
Sbjct: 446 TYTALMVGLCEDGRMMEAAEVFRAMLKDGLSPNQQVCTALVHGYIKAERMEDAMEILKQM 505

Query: 433 TECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKG 492
           TECNIKPDLILYGTIIWGLCSQNKLEE++LIIKEMKSQGISANPVIYTTIMDAYFKAGK 
Sbjct: 506 TECNIKPDLILYGTIIWGLCSQNKLEETELIIKEMKSQGISANPVIYTTIMDAYFKAGKS 565

Query: 493 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTAL 552
           SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTAL
Sbjct: 566 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTAL 625

Query: 553 IDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAI 612
           IDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAI
Sbjct: 626 IDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAI 685

Query: 613 EFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIE 672
           EFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIE
Sbjct: 686 EFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIE 745

Query: 673 LKNEMRRRGLITENCSLGVPSLRT 697
           LKNEMRRRGLITENCSL VPSLRT
Sbjct: 746 LKNEMRRRGLITENCSLEVPSLRT 769

[Close]
BLAST of Carg01341 vs. NCBI nr
Match: XP_022993399.1 (putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucurbita maxima] >XP_022993400.1 putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucurbita maxima] >XP_022993401.1 putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucurbita maxima] >XP_022993402.1 putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucurbita maxima] >XP_022993404.1 putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucurbita maxima] >XP_022993405.1 putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 665/758 (87.73%), Postives = 675/758 (89.05%), Query Frame = 0 

Query: 1   MLLFFRGLFQVSRRASYR------------------------------------------ 60
           MLLFFRGLFQVSRRASYR                                          
Sbjct: 1   MLLFFRGLFQVSRRASYRVISLSSNSSHPGCLSSNAFNASSSLTSINGYYISCFWFTSFV 60

Query: 61  -------------------------------DLWNDPKIVILFDSALAPIWVSKILVELK 120
                                          DLWNDPKIVILFDSALAPIWVSKILVELK
Sbjct: 61  CMFRLPFVSYSNTNSSFELLDIGYLRKIIQQDLWNDPKIVILFDSALAPIWVSKILVELK 120

Query: 121 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFP 180
           EDPKLALKFFKWAGSQIGFCH TESYCIIAHMLFCARMY NAHDIIKEVILKCRIDM FP
Sbjct: 121 EDPKLALKFFKWAGSQIGFCHATESYCIIAHMLFCARMYTNAHDIIKEVILKCRIDMIFP 180

Query: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240
           VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL
Sbjct: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240

Query: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF 300
           LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVM+DYLCKEGDLENARRLFVQMRQMGF
Sbjct: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMVDYLCKEGDLENARRLFVQMRQMGF 300

Query: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE 360
           SPDVVTYNSLIDGYGKVGLLEESVYLF+EMKD+GCVPDVITYNALINCFCKFEKMPRAFE
Sbjct: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFKEMKDVGCVPDVITYNALINCFCKFEKMPRAFE 360

Query: 361 YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420
           YLSEMKN+GLKPNVVTYSTLIDAFCK GMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC
Sbjct: 361 YLSEMKNSGLKPNVVTYSTLIDAFCKGGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420

Query: 421 KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ 480
           KAGNLTEAWKLSNDMLQAG NLNVV+YTALMDGLCEDGRMMEAEEVF+AMLKDGLSPNQQ
Sbjct: 421 KAGNLTEAWKLSNDMLQAGVNLNVVSYTALMDGLCEDGRMMEAEEVFKAMLKDGLSPNQQ 480

Query: 481 VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM 540
           +YTALVHGYIKAERMEDAME LKQMTECNIKPDLILYGT+IWGLCSQNKLEE+KLIIKEM
Sbjct: 481 LYTALVHGYIKAERMEDAMEILKQMTECNIKPDLILYGTVIWGLCSQNKLEETKLIIKEM 540

Query: 541 KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 600
           KSQGISANPVIYTTIMDAYFKAGK SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTG+V
Sbjct: 541 KSQGISANPVIYTTIMDAYFKAGKSSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGLV 600

Query: 601 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660
           ELA DYF RMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL
Sbjct: 601 ELAFDYFSRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660

Query: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 686
           IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKF NEMIEKGI
Sbjct: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFLNEMIEKGI 720

[Close]
BLAST of Carg01341 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 2.7e-246
Identity = 400/683 (58.57%), Postives = 528/683 (77.31%), Query Frame = 0 

Query: 13  RRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTES 72
           R+  + DLW+DP +  LFD  LAPIWV ++LVELKEDPKLA KFFKW+ ++ GF H+ ES
Sbjct: 85  RKVVHNDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVES 144

Query: 73  YCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDIL 132
           YCI+AH+LFCARMY +A+ ++KE++L  + D     C++FD+LWSTRNVCV G GVFD L
Sbjct: 145 YCIVAHILFCARMYYDANSVLKEMVLS-KAD-----CDVFDVLWSTRNVCVPGFGVFDAL 204

Query: 133 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGI 192
           FSVL++LG+LEEA +CFS+M++FR  PK RSCN LLHR +K G    VK+FF DMIGAG 
Sbjct: 205 FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 264

Query: 193 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 252
            P+VFTYN+MID +CKEGD+E AR LF +M+  G  PD VTYNS+IDG+GKVG L+++V 
Sbjct: 265 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 324

Query: 253 LFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 312
            FEEMKD+ C PDVITYNALINCFCKF K+P   E+  EMK NGLKPNVV+YSTL+DAFC
Sbjct: 325 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 384

Query: 313 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 372
           KEGMMQ AIK +VDMRRVGL+PNE+TYTSLIDANCK GNL++A++L N+MLQ G   NVV
Sbjct: 385 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 444

Query: 373 TYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQM 432
           TYTAL+DGLC+  RM EAEE+F  M   G+ PN   Y AL+HG++KA+ M+ A+E L ++
Sbjct: 445 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 504

Query: 433 TECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKG 492
               IKPDL+LYGT IWGLCS  K+E +K+++ EMK  GI AN +IYTT+MDAYFK+G  
Sbjct: 505 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 564

Query: 493 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMS-DLGLQPNVAVYTA 552
           ++ ++LL +M+++ +E TVVT+CVLIDGLCK  +V  AVDYF R+S D GLQ N A++TA
Sbjct: 565 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 624

Query: 553 LIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLA 612
           +IDGLCK N +E+A  LF++M  +G+ PD+TA+T+L+DGN K GN+ EAL L  +M ++ 
Sbjct: 625 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 684

Query: 613 IEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAI 672
           ++ DL AYTS+V G S C  L +AR F  EMI +GI P+E+LC  +L+++Y+LG +DEA+
Sbjct: 685 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 744

Query: 673 ELKNEMRRRGLITENCSLGVPSL 695
           EL++ + +  L+T +    +P++
Sbjct: 745 ELQSYLMKHQLLTSDNDNALPNM 761

[Close]
BLAST of Carg01341 vs. ExPASy Swiss-Prot
Match: Q9ZUA2 (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX=3702 GN=At2g01740 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 9.9e-108
Identity = 207/547 (37.84%), Postives = 319/547 (58.32%), Query Frame = 0 

Query: 141 LLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYN 200
           ++ EA +  SR+RK   LP   +CN  +H+L  S  G L  KF   ++  G  P   ++N
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 201 VMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMK-- 260
            ++ ++CK G ++ A  +   M + G  PDV++YNSLIDG+ + G +  +  + E ++  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 261 -DIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMM 320
               C PD++++N+L N F K + +   F Y+  M      PNVVTYST ID FCK G +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGEL 180

Query: 321 QYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTAL 380
           Q A+K F  M+R  L PN  T+T LID  CKAG+L  A  L  +M +   +LNVVTYTAL
Sbjct: 181 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 240

Query: 381 MDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNI 440
           +DG C+ G M  AEE++  M++D + PN  VYT ++ G+ +    ++AM+ L +M    +
Sbjct: 241 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 300

Query: 441 KPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAIN 500
           + D+  YG II GLC   KL+E+  I+++M+   +  + VI+TT+M+AYFK+G+   A+N
Sbjct: 301 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 360

Query: 501 LLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLC 560
           + HK+ + G E  VV    +IDG+ K G +  A+ YF        + N  +YT LID LC
Sbjct: 361 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVLIDALC 420

Query: 561 KTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAIEFDLH 620
           K       ++LF ++   G+ PDK  +T+ I G  K GNL +A  L +RM    +  DL 
Sbjct: 421 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 480

Query: 621 AYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIELKNEM 680
           AYT+++ G +  G + +AR+ F+EM+  GI P+  +   L+R Y K G +  A +L  +M
Sbjct: 481 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 540

Query: 681 RRRGLIT 685
           +RRGL+T
Sbjct: 541 QRRGLVT 541

[Close]
BLAST of Carg01341 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.4e-101
Identity = 206/650 (31.69%), Postives = 347/650 (53.38%), Query Frame = 0 

Query: 37  IWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEV 96
           IWV   L+++K D +L L FF WA S+       ES CI+ H+   ++    A  +I   
Sbjct: 91  IWV---LMKIKCDYRLVLDFFDWARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSF 150

Query: 97  ILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFR 156
             + ++++T      FD+L  T     S   VFD+ F VLV+ GLL EA   F +M  + 
Sbjct: 151 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 210

Query: 157 TLPKARSCNFLLHRLSKSGNGQLVKKF-FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENA 216
            +    SCN  L RLSK           F +    G+  +V +YN++I ++C+ G ++ A
Sbjct: 211 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 270

Query: 217 RRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINC 276
             L + M   G++PDV++Y+++++GY + G L++   L E MK  G  P+   Y ++I  
Sbjct: 271 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 330

Query: 277 FCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPN 336
            C+  K+  A E  SEM   G+ P+ V Y+TLID FCK G ++ A K F +M    + P+
Sbjct: 331 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 390

Query: 337 EFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFR 396
             TYT++I   C+ G++ EA KL ++M   G   + VT+T L++G C+ G M +A  V  
Sbjct: 391 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 450

Query: 397 AMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQN 456
            M++ G SPN   YT L+ G  K   ++ A E L +M +  ++P++  Y +I+ GLC   
Sbjct: 451 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 510

Query: 457 KLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYC 516
            +EE+  ++ E ++ G++A+ V YTT+MDAY K+G+   A  +L +M   G++ T+VT+ 
Sbjct: 511 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 570

Query: 517 VLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYR 576
           VL++G C  GM+E        M   G+ PN   + +L+   C  N +++A  ++ +M  R
Sbjct: 571 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 630

Query: 577 GMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQA 636
           G+ PD   +  L+ G+ K  N++EA  L   M        +  Y+ ++ GF +     +A
Sbjct: 631 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 690

Query: 637 RKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIELKNEMRRRGLITE 686
           R+ F++M  +G+  ++ +        YK  + D  ++  +E+    L+ E
Sbjct: 691 REVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDE 735

[Close]
BLAST of Carg01341 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-92
Identity = 201/638 (31.50%), Postives = 325/638 (50.94%), Query Frame = 0 

Query: 51  KLALKFFKWAGSQIGF--CHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPV 110
           KLALKF KW   Q G    H  +  CI  H+L  ARMY  A  I+KE+ L     M+   
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSL-----MSGKS 110

Query: 111 CNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLL 170
             +F  L +T  +C S   V+DIL  V +  G+++++ E F  M  +   P   +CN +L
Sbjct: 111 SFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 170

Query: 171 HRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFS 230
             + KSG    V  F  +M+   I P V T+N++I+ LC EG  E +  L  +M + G++
Sbjct: 171 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 230

Query: 231 PDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEY 290
           P +VTYN+++  Y K G  + ++ L + MK  G   DV TYN LI+  C+  ++ + +  
Sbjct: 231 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 290

Query: 291 LSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCK 350
           L +M+   + PN VTY+TLI+ F  EG +  A +L  +M   GL PN  T+ +LID +  
Sbjct: 291 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 350

Query: 351 AGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQV 410
            GN  EA K+   M   G   + V+Y  L+DGLC++     A   +  M ++G+   +  
Sbjct: 351 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 410

Query: 411 YTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMK 470
           YT ++ G  K   +++A+  L +M++  I PD++ Y  +I G C   + + +K I+  + 
Sbjct: 411 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 470

Query: 471 SQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVE 530
             G+S N +IY+T++    + G   +AI +   M   G      T+ VL+  LCK G V 
Sbjct: 471 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 530

Query: 531 LAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALI 590
            A ++   M+  G+ PN   +  LI+G   +     A  +FDEM   G  P    + +L+
Sbjct: 531 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 590

Query: 591 DGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGIL 650
            G  K G+L+EA   +  +  +    D   Y ++++   + G+L +A   F EM+++ IL
Sbjct: 591 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 650

Query: 651 PEEILCTCLLREYYKLGQLDEAIELKNEMRRRGLITEN 687
           P+    T L+    + G+   AI    E   RG +  N
Sbjct: 651 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683

[Close]
BLAST of Carg01341 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.4e-92
Identity = 201/650 (30.92%), Postives = 328/650 (50.46%), Query Frame = 0 

Query: 36  PIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKE 95
           P   S +L++ + D  L LKF  WA     F  T    CI  H+L   ++Y  A  + ++
Sbjct: 48  PEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRCKCITLHILTKFKLYKTAQILAED 107

Query: 96  VILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKF 155
           V  K   D    +  +F  L  T ++C S + VFD++      L L+++A       +  
Sbjct: 108 VAAKTLDDEYASL--VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAH 167

Query: 156 RTLPKARSCNFLLHRLSKS-GNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLEN 215
             +P   S N +L    +S  N    +  F +M+ + ++P+VFTYN++I   C  G+++ 
Sbjct: 168 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 227

Query: 216 ARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALIN 275
           A  LF +M   G  P+VVTYN+LIDGY K+  +++   L   M   G  P++I+YN +IN
Sbjct: 228 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 287

Query: 276 CFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLP 335
             C+  +M      L+EM   G   + VTY+TLI  +CKEG    A+ +  +M R GL P
Sbjct: 288 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 347

Query: 336 NEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVF 395
           +  TYTSLI + CKAGN+  A +  + M   G   N  TYT L+DG  + G M EA  V 
Sbjct: 348 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 407

Query: 396 RAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQ 455
           R M  +G SP+   Y AL++G+    +MEDA+  L+ M E  + PD++ Y T++ G C  
Sbjct: 408 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 467

Query: 456 NKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTY 515
             ++E+  + +EM  +GI  + + Y++++  + +  +  +A +L  +M  +G+     TY
Sbjct: 468 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 527

Query: 516 CVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQY 575
             LI+  C  G +E A+     M + G+ P+V  Y+ LI+GL K +    AK+L  ++ Y
Sbjct: 528 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 587

Query: 576 RGMTPDKTAF---------------TALIDGNLKLGNLQEALDLISRMTDLAIEFDLHAY 635
               P    +                +LI G    G + EA  +   M     + D  AY
Sbjct: 588 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 647

Query: 636 TSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDE 670
             M+ G  + GD+ +A   + EM++ G L   +    L++  +K G+++E
Sbjct: 648 NIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693

[Close]
BLAST of Carg01341 vs. ExPASy TrEMBL
Match: A0A6J1FET4 (putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita moschata OX=3662 GN=LOC111444847 PE=4 SV=1)

HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 682/769 (88.69%), Postives = 689/769 (89.60%), Query Frame = 0 

Query: 1   MLLFFRGLFQVSRRASYR------------------------------------------ 60
           MLLFFRGLFQVSRRASYR                                          
Sbjct: 12  MLLFFRGLFQVSRRASYRVISLSSNSSHPGCLSFNAFNASSSLTSINGCYISCLWFASFL 71

Query: 61  -------------------------------DLWNDPKIVILFDSALAPIWVSKILVELK 120
                                          DLWNDPKIVILFDSALAPIWVSKILVELK
Sbjct: 72  CIFRLPFVSYSNTNSSFESLDIGSLRKIIQQDLWNDPKIVILFDSALAPIWVSKILVELK 131

Query: 121 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFP 180
           EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMY NAHDIIKEVILKCRIDM FP
Sbjct: 132 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYTNAHDIIKEVILKCRIDMIFP 191

Query: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240
           VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL
Sbjct: 192 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 251

Query: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF 300
           LHRLSKSGNGQLVK FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLE+ARRLFVQMRQMGF
Sbjct: 252 LHRLSKSGNGQLVKNFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLESARRLFVQMRQMGF 311

Query: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE 360
           SPDVVTYNSLIDGYGKVGLLEESVYLF+EMKD+GCVPDVITYNALINCFCKFEKMPRAFE
Sbjct: 312 SPDVVTYNSLIDGYGKVGLLEESVYLFKEMKDVGCVPDVITYNALINCFCKFEKMPRAFE 371

Query: 361 YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420
           YLSEMKN+GLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC
Sbjct: 372 YLSEMKNSGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 431

Query: 421 KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ 480
           KAGNLTEAWKLSNDMLQAG NLNVV+YTALMDGLCEDGRMMEAEEVF+AMLKDGLSPNQQ
Sbjct: 432 KAGNLTEAWKLSNDMLQAGVNLNVVSYTALMDGLCEDGRMMEAEEVFKAMLKDGLSPNQQ 491

Query: 481 VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM 540
           VYTALVHGYIKAERMEDAME LKQMTECNIKPDLILYGTIIWGLCSQNKLEE+KLIIKEM
Sbjct: 492 VYTALVHGYIKAERMEDAMEILKQMTECNIKPDLILYGTIIWGLCSQNKLEETKLIIKEM 551

Query: 541 KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 600
           KSQGISANPVIYTTIMDAYFKAGK SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV
Sbjct: 552 KSQGISANPVIYTTIMDAYFKAGKSSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 611

Query: 601 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660
           ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL
Sbjct: 612 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 671

Query: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 697
           IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI
Sbjct: 672 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 731

[Close]
BLAST of Carg01341 vs. ExPASy TrEMBL
Match: A0A6J1K035 (putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489432 PE=4 SV=1)

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 665/758 (87.73%), Postives = 675/758 (89.05%), Query Frame = 0 

Query: 1   MLLFFRGLFQVSRRASYR------------------------------------------ 60
           MLLFFRGLFQVSRRASYR                                          
Sbjct: 1   MLLFFRGLFQVSRRASYRVISLSSNSSHPGCLSSNAFNASSSLTSINGYYISCFWFTSFV 60

Query: 61  -------------------------------DLWNDPKIVILFDSALAPIWVSKILVELK 120
                                          DLWNDPKIVILFDSALAPIWVSKILVELK
Sbjct: 61  CMFRLPFVSYSNTNSSFELLDIGYLRKIIQQDLWNDPKIVILFDSALAPIWVSKILVELK 120

Query: 121 EDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFP 180
           EDPKLALKFFKWAGSQIGFCH TESYCIIAHMLFCARMY NAHDIIKEVILKCRIDM FP
Sbjct: 121 EDPKLALKFFKWAGSQIGFCHATESYCIIAHMLFCARMYTNAHDIIKEVILKCRIDMIFP 180

Query: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240
           VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL
Sbjct: 181 VCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFL 240

Query: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGF 300
           LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVM+DYLCKEGDLENARRLFVQMRQMGF
Sbjct: 241 LHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMVDYLCKEGDLENARRLFVQMRQMGF 300

Query: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFE 360
           SPDVVTYNSLIDGYGKVGLLEESVYLF+EMKD+GCVPDVITYNALINCFCKFEKMPRAFE
Sbjct: 301 SPDVVTYNSLIDGYGKVGLLEESVYLFKEMKDVGCVPDVITYNALINCFCKFEKMPRAFE 360

Query: 361 YLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420
           YLSEMKN+GLKPNVVTYSTLIDAFCK GMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC
Sbjct: 361 YLSEMKNSGLKPNVVTYSTLIDAFCKGGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANC 420

Query: 421 KAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQ 480
           KAGNLTEAWKLSNDMLQAG NLNVV+YTALMDGLCEDGRMMEAEEVF+AMLKDGLSPNQQ
Sbjct: 421 KAGNLTEAWKLSNDMLQAGVNLNVVSYTALMDGLCEDGRMMEAEEVFKAMLKDGLSPNQQ 480

Query: 481 VYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEM 540
           +YTALVHGYIKAERMEDAME LKQMTECNIKPDLILYGT+IWGLCSQNKLEE+KLIIKEM
Sbjct: 481 LYTALVHGYIKAERMEDAMEILKQMTECNIKPDLILYGTVIWGLCSQNKLEETKLIIKEM 540

Query: 541 KSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMV 600
           KSQGISANPVIYTTIMDAYFKAGK SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTG+V
Sbjct: 541 KSQGISANPVIYTTIMDAYFKAGKSSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGLV 600

Query: 601 ELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660
           ELA DYF RMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL
Sbjct: 601 ELAFDYFSRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTAL 660

Query: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGI 686
           IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKF NEMIEKGI
Sbjct: 661 IDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFLNEMIEKGI 720

[Close]
BLAST of Carg01341 vs. ExPASy TrEMBL
Match: A0A6J1CX77 (putative pentatricopeptide repeat-containing protein At2g02150 OS=Momordica charantia OX=3673 GN=LOC111015641 PE=4 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 607/682 (89.00%), Postives = 643/682 (94.28%), Query Frame = 0 

Query: 13  RRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTES 72
           R+   +DLWNDP IV+LFDSALAPIWVSKILVE KEDPKLA KFFKWAGSQ+GF HTTE+
Sbjct: 101 RKIIQQDLWNDPMIVVLFDSALAPIWVSKILVEFKEDPKLAFKFFKWAGSQVGFRHTTEA 160

Query: 73  YCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDIL 132
           YCI+ H+LF ARMY NAHDIIKEVILK + D+  PVC IFD+LWSTRN+ V GTGVFD+L
Sbjct: 161 YCIVVHILFRARMYANAHDIIKEVILKSQNDLVLPVCKIFDILWSTRNIFVLGTGVFDVL 220

Query: 133 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGI 192
           FSVLVELGLLEEANECF RMRKFRTLPKARSCNFLLHRLSKSG GQLV+KFF+DMIGAGI
Sbjct: 221 FSVLVELGLLEEANECFLRMRKFRTLPKARSCNFLLHRLSKSGKGQLVRKFFHDMIGAGI 280

Query: 193 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 252
           APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY
Sbjct: 281 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 340

Query: 253 LFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 312
           LF EMK  GCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC
Sbjct: 341 LFNEMKGAGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 400

Query: 313 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 372
           KEG+MQ AIKLFVDMRRVGL+PNEFTYTSLIDANCKAGNLTEAWKLS+DMLQAG NLN+V
Sbjct: 401 KEGIMQGAIKLFVDMRRVGLVPNEFTYTSLIDANCKAGNLTEAWKLSHDMLQAGVNLNIV 460

Query: 373 TYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQM 432
           TYTALMDGLCEDGRM EAEEV+RAMLKDG+SPNQQVYTALVHGYIKAERMEDAME LKQM
Sbjct: 461 TYTALMDGLCEDGRMTEAEEVYRAMLKDGISPNQQVYTALVHGYIKAERMEDAMEILKQM 520

Query: 433 TECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKG 492
           TECNIKPDLILYGTIIWGLCSQNKLEE+KLIIKEMKS+GI+ANPVIYTTI+DAYFKAG+ 
Sbjct: 521 TECNIKPDLILYGTIIWGLCSQNKLEETKLIIKEMKSRGINANPVIYTTIIDAYFKAGES 580

Query: 493 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTAL 552
           SDAINLL +MQD G+EATVVTYCVLIDGLCKTG VELAVDYFGRMS  GLQPNVAVYTAL
Sbjct: 581 SDAINLLQEMQDAGIEATVVTYCVLIDGLCKTGKVELAVDYFGRMSAFGLQPNVAVYTAL 640

Query: 553 IDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAI 612
           IDGLCKTNC+ESAKKLFDEMQ RGM PDKTAFTALIDGNLKLGNLQEAL+L SRMT+LAI
Sbjct: 641 IDGLCKTNCVESAKKLFDEMQCRGMAPDKTAFTALIDGNLKLGNLQEALNLSSRMTELAI 700

Query: 613 EFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIE 672
           EFDLHAYTS+VSGFSQCG+LHQARKFF+EM+EKGILPEEILC CLLREYYKLGQLDEAIE
Sbjct: 701 EFDLHAYTSLVSGFSQCGELHQARKFFDEMVEKGILPEEILCICLLREYYKLGQLDEAIE 760

Query: 673 LKNEMRRRGLITENCSLGVPSL 695
           LK+EM+RRGLITE CS  VPSL
Sbjct: 761 LKSEMQRRGLITEKCSHAVPSL 782

[Close]
BLAST of Carg01341 vs. ExPASy TrEMBL
Match: A0A6J1H589 (putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460688 PE=4 SV=1)

HSP 1 Score: 1248.4 bits (3229), Expect = 0.0e+00
Identity = 602/684 (88.01%), Postives = 649/684 (94.88%), Query Frame = 0 

Query: 13  RRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTES 72
           R+   +DLWNDPKIV+LFDSALAPIWVSKILVELKEDPKLALKFFKWAG+ IGF HTTES
Sbjct: 104 RKIIQQDLWNDPKIVVLFDSALAPIWVSKILVELKEDPKLALKFFKWAGTHIGFRHTTES 163

Query: 73  YCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDIL 132
           YCII HMLF ARMY NAHDI+KE++LK R D+  PVCN+FD+LWSTRN CVSGTGVFD+L
Sbjct: 164 YCIIVHMLFRARMYTNAHDIMKEMVLKSRTDLILPVCNVFDILWSTRNFCVSGTGVFDVL 223

Query: 133 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGI 192
           FSVLVELGLLEEANECFS+MRKFRTLPKARSCNFLLHRLSKSGNGQLV+KFF+DMIGAGI
Sbjct: 224 FSVLVELGLLEEANECFSKMRKFRTLPKARSCNFLLHRLSKSGNGQLVRKFFHDMIGAGI 283

Query: 193 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 252
           APSVFTYNVMID+LCKEGDLENAR LFVQMR MGFSPDVVTYNSLIDGYGKVGLL+ESVY
Sbjct: 284 APSVFTYNVMIDHLCKEGDLENARSLFVQMRTMGFSPDVVTYNSLIDGYGKVGLLKESVY 343

Query: 253 LFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 312
           LF EMKD+GCVPDVITYNALINCFCKFEKMP+AFEYLSEMKN GLKPNVVTYSTLIDAFC
Sbjct: 344 LFNEMKDVGCVPDVITYNALINCFCKFEKMPQAFEYLSEMKNIGLKPNVVTYSTLIDAFC 403

Query: 313 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 372
           KEGMMQ AIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAG NLN+V
Sbjct: 404 KEGMMQGAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGVNLNIV 463

Query: 373 TYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQM 432
           TYTALMDGLCEDGRMMEAEEVFRAMLKDG+SPNQQVYTALVHGYIKAE+MEDA+E LKQM
Sbjct: 464 TYTALMDGLCEDGRMMEAEEVFRAMLKDGISPNQQVYTALVHGYIKAEKMEDALEILKQM 523

Query: 433 TECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKG 492
           TEC IKPDL+LYGTIIWGLC+QNKLEE+KLIIKEMKS+GI ANPVIYTTI+DAYFKAGK 
Sbjct: 524 TECGIKPDLVLYGTIIWGLCNQNKLEETKLIIKEMKSRGIRANPVIYTTIIDAYFKAGKS 583

Query: 493 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTAL 552
           SDA++LL +MQ++GVEATVVTYCVLIDGLCKTGMVE+AVDYFGRMSD G+QPNVAVYTAL
Sbjct: 584 SDALDLLQEMQEVGVEATVVTYCVLIDGLCKTGMVEVAVDYFGRMSDFGVQPNVAVYTAL 643

Query: 553 IDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAI 612
           IDGLCK NCIESA+KLF+EMQ RGMTPDKTAFTALIDGNLKLGNLQE L+LIS+MT+L I
Sbjct: 644 IDGLCKINCIESAEKLFEEMQCRGMTPDKTAFTALIDGNLKLGNLQETLNLISKMTELVI 703

Query: 613 EFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIE 672
           EFDLHAYT++VSGFSQCG+LHQARKFFNEMIEKGILP+EILC CLL+EY KLG LDEAI+
Sbjct: 704 EFDLHAYTTLVSGFSQCGELHQARKFFNEMIEKGILPDEILCICLLKEYNKLGHLDEAIK 763

Query: 673 LKNEMRRRGLITENCSLGVPSLRT 697
           LKNEM+RRGLITE CS  VPSL+T
Sbjct: 764 LKNEMQRRGLITEKCSHEVPSLKT 787

[Close]
BLAST of Carg01341 vs. ExPASy TrEMBL
Match: A0A1S3CT40 (putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucumis melo OX=3656 GN=LOC103503999 PE=4 SV=1)

HSP 1 Score: 1199.5 bits (3102), Expect = 0.0e+00
Identity = 579/680 (85.15%), Postives = 629/680 (92.50%), Query Frame = 0 

Query: 13  RRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTES 72
           R+   +DLWNDPKIV+LFDSALAPIWVS+ILV LKEDPKLALKFFKWAGSQ+GF HTTES
Sbjct: 107 RKIIQQDLWNDPKIVVLFDSALAPIWVSRILVGLKEDPKLALKFFKWAGSQVGFRHTTES 166

Query: 73  YCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDIL 132
           YCII H++F ARMY +AHD +KEVI+K RIDM FPVCNIFDMLWSTRN+CVSG+GVFD+L
Sbjct: 167 YCIIVHLVFRARMYTDAHDTVKEVIMKNRIDMGFPVCNIFDMLWSTRNICVSGSGVFDVL 226

Query: 133 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGI 192
           FSV VELGLLEEANECFSRMR FRTLPKARSCNFLLHRLSKSGNGQLV+KFFNDMIGAGI
Sbjct: 227 FSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI 286

Query: 193 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 252
           APSVFTYNVMIDYLCKEGDLENARRLFVQMR+MG SPDVVTYNSLIDGYGKVG LEE+V 
Sbjct: 287 APSVFTYNVMIDYLCKEGDLENARRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEAVS 346

Query: 253 LFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 312
            F EMKD+GCVPD+ITYN LINC+CKFEKMPRAFEY SEMKNNGLKPNVVTYSTLIDAFC
Sbjct: 347 FFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFC 406

Query: 313 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 372
           KEGMMQ A+KLFVDM+R GLLPNEFTYTSLIDANCKAGNLTEAWKL NDMLQAG  LN+V
Sbjct: 407 KEGMMQGAVKLFVDMKRAGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 466

Query: 373 TYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQM 432
           TYTAL+DGLCEDGRM+EAEEVFR+MLKDG+SPNQQVYTALVHGYIKAERMEDAM+ LKQM
Sbjct: 467 TYTALVDGLCEDGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 526

Query: 433 TECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKG 492
            ECNIKPDLILYG++IWGLCSQ+KLEE+KLI+KEMKS+GISANPVIYTTI+DAYFKAGK 
Sbjct: 527 KECNIKPDLILYGSVIWGLCSQSKLEETKLILKEMKSRGISANPVIYTTIIDAYFKAGKS 586

Query: 493 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTAL 552
           SDAINL  +MQD+GVEATVVTYCVLIDGLCK G+VELAVDYF RM  LGLQPNVAVYT+L
Sbjct: 587 SDAINLFQEMQDVGVEATVVTYCVLIDGLCKAGIVELAVDYFCRMFSLGLQPNVAVYTSL 646

Query: 553 IDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAI 612
           IDGL KTNCI+SA KLFDEMQ RGMTPD TAFTALIDGNLK GNLQEAL  ISRMT+LAI
Sbjct: 647 IDGLSKTNCIKSANKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVFISRMTELAI 706

Query: 613 EFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIE 672
           EFDLH YTS+V+GFS+CG+L QARKFFNEMI+KGILPEE+LC CLLREY K GQLDEAIE
Sbjct: 707 EFDLHFYTSLVAGFSKCGELRQARKFFNEMIKKGILPEEVLCICLLREYCKRGQLDEAIE 766

Query: 673 LKNEMRRRGLITENCSLGVP 693
           LKNEM+  GLITE+ ++  P
Sbjct: 767 LKNEMQGMGLITESAAMQFP 786

[Close]
BLAST of Carg01341 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 852.8 bits (2202), Expect = 1.9e-247
Identity = 400/683 (58.57%), Postives = 528/683 (77.31%), Query Frame = 0 

Query: 13  RRASYRDLWNDPKIVILFDSALAPIWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTES 72
           R+  + DLW+DP +  LFD  LAPIWV ++LVELKEDPKLA KFFKW+ ++ GF H+ ES
Sbjct: 85  RKVVHNDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVES 144

Query: 73  YCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDIL 132
           YCI+AH+LFCARMY +A+ ++KE++L  + D     C++FD+LWSTRNVCV G GVFD L
Sbjct: 145 YCIVAHILFCARMYYDANSVLKEMVLS-KAD-----CDVFDVLWSTRNVCVPGFGVFDAL 204

Query: 133 FSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGI 192
           FSVL++LG+LEEA +CFS+M++FR  PK RSCN LLHR +K G    VK+FF DMIGAG 
Sbjct: 205 FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 264

Query: 193 APSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVY 252
            P+VFTYN+MID +CKEGD+E AR LF +M+  G  PD VTYNS+IDG+GKVG L+++V 
Sbjct: 265 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 324

Query: 253 LFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFC 312
            FEEMKD+ C PDVITYNALINCFCKF K+P   E+  EMK NGLKPNVV+YSTL+DAFC
Sbjct: 325 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 384

Query: 313 KEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVV 372
           KEGMMQ AIK +VDMRRVGL+PNE+TYTSLIDANCK GNL++A++L N+MLQ G   NVV
Sbjct: 385 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 444

Query: 373 TYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQM 432
           TYTAL+DGLC+  RM EAEE+F  M   G+ PN   Y AL+HG++KA+ M+ A+E L ++
Sbjct: 445 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 504

Query: 433 TECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKG 492
               IKPDL+LYGT IWGLCS  K+E +K+++ EMK  GI AN +IYTT+MDAYFK+G  
Sbjct: 505 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 564

Query: 493 SDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMS-DLGLQPNVAVYTA 552
           ++ ++LL +M+++ +E TVVT+CVLIDGLCK  +V  AVDYF R+S D GLQ N A++TA
Sbjct: 565 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 624

Query: 553 LIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLA 612
           +IDGLCK N +E+A  LF++M  +G+ PD+TA+T+L+DGN K GN+ EAL L  +M ++ 
Sbjct: 625 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 684

Query: 613 IEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAI 672
           ++ DL AYTS+V G S C  L +AR F  EMI +GI P+E+LC  +L+++Y+LG +DEA+
Sbjct: 685 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 744

Query: 673 ELKNEMRRRGLITENCSLGVPSL 695
           EL++ + +  L+T +    +P++
Sbjct: 745 ELQSYLMKHQLLTSDNDNALPNM 761

[Close]
BLAST of Carg01341 vs. TAIR 10
Match: AT2G01740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 392.5 bits (1007), Expect = 7.0e-109
Identity = 207/547 (37.84%), Postives = 319/547 (58.32%), Query Frame = 0 

Query: 141 LLEEANECFSRMRKFRTLPKARSCNFLLHRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYN 200
           ++ EA +  SR+RK   LP   +CN  +H+L  S  G L  KF   ++  G  P   ++N
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 201 VMIDYLCKEGDLENARRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMK-- 260
            ++ ++CK G ++ A  +   M + G  PDV++YNSLIDG+ + G +  +  + E ++  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 261 -DIGCVPDVITYNALINCFCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMM 320
               C PD++++N+L N F K + +   F Y+  M      PNVVTYST ID FCK G +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGEL 180

Query: 321 QYAIKLFVDMRRVGLLPNEFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTAL 380
           Q A+K F  M+R  L PN  T+T LID  CKAG+L  A  L  +M +   +LNVVTYTAL
Sbjct: 181 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 240

Query: 381 MDGLCEDGRMMEAEEVFRAMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNI 440
           +DG C+ G M  AEE++  M++D + PN  VYT ++ G+ +    ++AM+ L +M    +
Sbjct: 241 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 300

Query: 441 KPDLILYGTIIWGLCSQNKLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAIN 500
           + D+  YG II GLC   KL+E+  I+++M+   +  + VI+TT+M+AYFK+G+   A+N
Sbjct: 301 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 360

Query: 501 LLHKMQDMGVEATVVTYCVLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLC 560
           + HK+ + G E  VV    +IDG+ K G +  A+ YF        + N  +YT LID LC
Sbjct: 361 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVLIDALC 420

Query: 561 KTNCIESAKKLFDEMQYRGMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAIEFDLH 620
           K       ++LF ++   G+ PDK  +T+ I G  K GNL +A  L +RM    +  DL 
Sbjct: 421 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLL 480

Query: 621 AYTSMVSGFSQCGDLHQARKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIELKNEM 680
           AYT+++ G +  G + +AR+ F+EM+  GI P+  +   L+R Y K G +  A +L  +M
Sbjct: 481 AYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 540

Query: 681 RRRGLIT 685
           +RRGL+T
Sbjct: 541 QRRGLVT 541

[Close]
BLAST of Carg01341 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 372.1 bits (954), Expect = 9.9e-103
Identity = 206/650 (31.69%), Postives = 347/650 (53.38%), Query Frame = 0 

Query: 37  IWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEV 96
           IWV   L+++K D +L L FF WA S+       ES CI+ H+   ++    A  +I   
Sbjct: 91  IWV---LMKIKCDYRLVLDFFDWARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSF 150

Query: 97  ILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFR 156
             + ++++T      FD+L  T     S   VFD+ F VLV+ GLL EA   F +M  + 
Sbjct: 151 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 210

Query: 157 TLPKARSCNFLLHRLSKSGNGQLVKKF-FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENA 216
            +    SCN  L RLSK           F +    G+  +V +YN++I ++C+ G ++ A
Sbjct: 211 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 270

Query: 217 RRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINC 276
             L + M   G++PDV++Y+++++GY + G L++   L E MK  G  P+   Y ++I  
Sbjct: 271 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 330

Query: 277 FCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPN 336
            C+  K+  A E  SEM   G+ P+ V Y+TLID FCK G ++ A K F +M    + P+
Sbjct: 331 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 390

Query: 337 EFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFR 396
             TYT++I   C+ G++ EA KL ++M   G   + VT+T L++G C+ G M +A  V  
Sbjct: 391 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 450

Query: 397 AMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQN 456
            M++ G SPN   YT L+ G  K   ++ A E L +M +  ++P++  Y +I+ GLC   
Sbjct: 451 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 510

Query: 457 KLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYC 516
            +EE+  ++ E ++ G++A+ V YTT+MDAY K+G+   A  +L +M   G++ T+VT+ 
Sbjct: 511 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 570

Query: 517 VLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYR 576
           VL++G C  GM+E        M   G+ PN   + +L+   C  N +++A  ++ +M  R
Sbjct: 571 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 630

Query: 577 GMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQA 636
           G+ PD   +  L+ G+ K  N++EA  L   M        +  Y+ ++ GF +     +A
Sbjct: 631 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 690

Query: 637 RKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIELKNEMRRRGLITE 686
           R+ F++M  +G+  ++ +        YK  + D  ++  +E+    L+ E
Sbjct: 691 REVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDE 735

[Close]
BLAST of Carg01341 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 372.1 bits (954), Expect = 9.9e-103
Identity = 206/650 (31.69%), Postives = 347/650 (53.38%), Query Frame = 0 

Query: 37  IWVSKILVELKEDPKLALKFFKWAGSQIGFCHTTESYCIIAHMLFCARMYMNAHDIIKEV 96
           IWV   L+++K D +L L FF WA S+       ES CI+ H+   ++    A  +I   
Sbjct: 91  IWV---LMKIKCDYRLVLDFFDWARSRRD--SNLESLCIVIHLAVASKDLKVAQSLISSF 150

Query: 97  ILKCRIDMTFPVCNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFR 156
             + ++++T      FD+L  T     S   VFD+ F VLV+ GLL EA   F +M  + 
Sbjct: 151 WERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG 210

Query: 157 TLPKARSCNFLLHRLSKSGNGQLVKKF-FNDMIGAGIAPSVFTYNVMIDYLCKEGDLENA 216
            +    SCN  L RLSK           F +    G+  +V +YN++I ++C+ G ++ A
Sbjct: 211 LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEA 270

Query: 217 RRLFVQMRQMGFSPDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINC 276
             L + M   G++PDV++Y+++++GY + G L++   L E MK  G  P+   Y ++I  
Sbjct: 271 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 330

Query: 277 FCKFEKMPRAFEYLSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPN 336
            C+  K+  A E  SEM   G+ P+ V Y+TLID FCK G ++ A K F +M    + P+
Sbjct: 331 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 390

Query: 337 EFTYTSLIDANCKAGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFR 396
             TYT++I   C+ G++ EA KL ++M   G   + VT+T L++G C+ G M +A  V  
Sbjct: 391 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 450

Query: 397 AMLKDGLSPNQQVYTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQN 456
            M++ G SPN   YT L+ G  K   ++ A E L +M +  ++P++  Y +I+ GLC   
Sbjct: 451 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 510

Query: 457 KLEESKLIIKEMKSQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYC 516
            +EE+  ++ E ++ G++A+ V YTT+MDAY K+G+   A  +L +M   G++ T+VT+ 
Sbjct: 511 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 570

Query: 517 VLIDGLCKTGMVELAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYR 576
           VL++G C  GM+E        M   G+ PN   + +L+   C  N +++A  ++ +M  R
Sbjct: 571 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 630

Query: 577 GMTPDKTAFTALIDGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQA 636
           G+ PD   +  L+ G+ K  N++EA  L   M        +  Y+ ++ GF +     +A
Sbjct: 631 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 690

Query: 637 RKFFNEMIEKGILPEEILCTCLLREYYKLGQLDEAIELKNEMRRRGLITE 686
           R+ F++M  +G+  ++ +        YK  + D  ++  +E+    L+ E
Sbjct: 691 REVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDE 735

[Close]
BLAST of Carg01341 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 341.3 bits (874), Expect = 1.9e-93
Identity = 201/638 (31.50%), Postives = 325/638 (50.94%), Query Frame = 0 

Query: 51  KLALKFFKWAGSQIGF--CHTTESYCIIAHMLFCARMYMNAHDIIKEVILKCRIDMTFPV 110
           KLALKF KW   Q G    H  +  CI  H+L  ARMY  A  I+KE+ L     M+   
Sbjct: 91  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSL-----MSGKS 150

Query: 111 CNIFDMLWSTRNVCVSGTGVFDILFSVLVELGLLEEANECFSRMRKFRTLPKARSCNFLL 170
             +F  L +T  +C S   V+DIL  V +  G+++++ E F  M  +   P   +CN +L
Sbjct: 151 SFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL 210

Query: 171 HRLSKSGNGQLVKKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENARRLFVQMRQMGFS 230
             + KSG    V  F  +M+   I P V T+N++I+ LC EG  E +  L  +M + G++
Sbjct: 211 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 270

Query: 231 PDVVTYNSLIDGYGKVGLLEESVYLFEEMKDIGCVPDVITYNALINCFCKFEKMPRAFEY 290
           P +VTYN+++  Y K G  + ++ L + MK  G   DV TYN LI+  C+  ++ + +  
Sbjct: 271 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 330

Query: 291 LSEMKNNGLKPNVVTYSTLIDAFCKEGMMQYAIKLFVDMRRVGLLPNEFTYTSLIDANCK 350
           L +M+   + PN VTY+TLI+ F  EG +  A +L  +M   GL PN  T+ +LID +  
Sbjct: 331 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 390

Query: 351 AGNLTEAWKLSNDMLQAGFNLNVVTYTALMDGLCEDGRMMEAEEVFRAMLKDGLSPNQQV 410
            GN  EA K+   M   G   + V+Y  L+DGLC++     A   +  M ++G+   +  
Sbjct: 391 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 450

Query: 411 YTALVHGYIKAERMEDAMETLKQMTECNIKPDLILYGTIIWGLCSQNKLEESKLIIKEMK 470
           YT ++ G  K   +++A+  L +M++  I PD++ Y  +I G C   + + +K I+  + 
Sbjct: 451 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 510

Query: 471 SQGISANPVIYTTIMDAYFKAGKGSDAINLLHKMQDMGVEATVVTYCVLIDGLCKTGMVE 530
             G+S N +IY+T++    + G   +AI +   M   G      T+ VL+  LCK G V 
Sbjct: 511 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 570

Query: 531 LAVDYFGRMSDLGLQPNVAVYTALIDGLCKTNCIESAKKLFDEMQYRGMTPDKTAFTALI 590
            A ++   M+  G+ PN   +  LI+G   +     A  +FDEM   G  P    + +L+
Sbjct: 571 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 630

Query: 591 DGNLKLGNLQEALDLISRMTDLAIEFDLHAYTSMVSGFSQCGDLHQARKFFNEMIEKGIL 650
            G  K G+L+EA   +  +  +    D   Y ++++   + G+L +A   F EM+++ IL
Sbjct: 631 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 690

Query: 651 PEEILCTCLLREYYKLGQLDEAIELKNEMRRRGLITEN 687
           P+    T L+    + G+   AI    E   RG +  N
Sbjct: 691 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723

The following BLAST results are available for this feature:
BLAST of Carg01341 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7016677.10.0e+00100.00putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
KAG6579158.10.0e+0089.99putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... [more]
XP_022938692.10.0e+0088.69putative pentatricopeptide repeat-containing protein At2g02150, partial [Cucurbi... [more]
XP_023550125.10.0e+0097.08putative pentatricopeptide repeat-containing protein At2g02150 [Cucurbita pepo s... [more]
XP_022993399.10.0e+0087.73putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 [Cucur... [more]
BLAST of Carg01341 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C8942.7e-24658.57Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
Q9ZUA29.9e-10837.84Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX... [more]
Q0WVK71.4e-10131.69Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9LVQ52.6e-9231.50Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
Q9FIX33.4e-9230.92Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg01341 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FET40.0e+0088.69putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucurbita mosc... [more]
A0A6J1K0350.0e+0087.73putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 OS=Cuc... [more]
A0A6J1CX770.0e+0089.00putative pentatricopeptide repeat-containing protein At2g02150 OS=Momordica char... [more]
A0A6J1H5890.0e+0088.01putative pentatricopeptide repeat-containing protein At2g02150 isoform X1 OS=Cuc... [more]
A0A1S3CT400.0e+0085.15putative pentatricopeptide repeat-containing protein At2g02150 OS=Cucumis melo O... [more]
BLAST of Carg01341 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G02150.11.9e-24758.57Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G01740.17.0e-10937.84Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.19.9e-10331.69Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.29.9e-10331.69Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G55840.11.9e-9331.50Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 331..362
e-value: 4.0E-9
score: 36.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 477..510
e-value: 4.8E-7
score: 27.5
coord: 408..440
e-value: 2.9E-7
score: 28.2
coord: 302..336
e-value: 4.4E-9
score: 34.0
coord: 163..195
e-value: 0.0024
score: 15.9
coord: 618..649
e-value: 1.2E-7
score: 29.4
coord: 443..475
e-value: 0.0016
score: 16.5
coord: 653..682
e-value: 1.9E-4
score: 19.4
coord: 512..546
e-value: 1.9E-9
score: 35.1
coord: 337..370
e-value: 8.1E-6
score: 23.7
coord: 197..231
e-value: 1.3E-10
score: 38.7
coord: 372..405
e-value: 7.4E-10
score: 36.4
coord: 267..301
e-value: 3.5E-8
score: 31.1
coord: 548..580
e-value: 6.2E-8
score: 30.3
coord: 232..266
e-value: 6.3E-10
score: 36.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 618..647
e-value: 1.6E-7
score: 31.1
coord: 443..472
e-value: 0.0021
score: 18.2
coord: 654..682
e-value: 3.0E-4
score: 20.8
coord: 130..155
e-value: 0.086
score: 13.1
coord: 163..192
e-value: 0.33
score: 11.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 194..239
e-value: 7.3E-16
score: 58.1
coord: 475..523
e-value: 1.4E-14
score: 54.0
coord: 544..590
e-value: 1.8E-13
score: 50.4
coord: 264..313
e-value: 3.2E-19
score: 68.9
coord: 370..415
e-value: 1.9E-12
score: 47.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 335..369
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 405..439
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 510..544
score: 12.068449
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 615..649
score: 13.011121
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..509
score: 11.070971
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 545..579
score: 12.364404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 8.659485
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 195..229
score: 13.723605
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 14.085328
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 13.08785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 370..404
score: 13.701682
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 9.854266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 580..614
score: 8.659485
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 650..684
score: 9.678885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 12.945353
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 329..398
e-value: 9.7E-21
score: 76.1
coord: 33..188
e-value: 7.6E-14
score: 53.6
coord: 259..328
e-value: 1.1E-25
score: 92.2
coord: 610..680
e-value: 3.5E-15
score: 58.0
coord: 399..465
e-value: 5.3E-17
score: 64.0
coord: 189..258
e-value: 9.5E-24
score: 86.0
coord: 466..536
e-value: 2.0E-19
score: 71.8
coord: 537..609
e-value: 6.9E-20
score: 73.4
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 41..686
NoneNo IPR availablePANTHERPTHR45613:SF358OS06G0565000 PROTEINcoord: 41..686
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 409..673
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 184..445

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01341-RACarg01341-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding