Carg01245 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGTCGTTTTTTACACCCATTTTTCTCCATCGTCGCTCTCTCGGGAAGCTTCTTTCACATAACTTCGCACAACAGACGCCGCCACTCGCCTTCTTTCTTCCTCCTGCCCAATCAATTCTTTTACTTCTAATCAGGGGGTATTGTTTCTAATCGCAGTTCTTATTTCTCTTGTTTCGCCAATCCTCTCGCTTGCAGACTGAATTTCTGATGTCAGGATTGAATTGAATACCCTTAGATACTGTATTGTTCTTCTGGGTTTCATTGTTTGTTGGAAATTGAATTGTCATTTATGTATACTGGACATATTGGGAAATTCGCTTCACAGAGTTTAAAGTAATTGATGAAACTACTTTCCATTTTTGGTTGTTGTGTGGTTTTCCGTTCTTGTGTGCGCCGCCATTTTTCGTTTGGATGATCTAACTTTGCGAATGGGGTATTGTTGATGTTTTGTATCTGCTGTTCTTCGTGTCTCTCCCATTGCTGATGAATTTTCTGCGATCGTCTATCTTTTCTTTTTCTGCTTGTTTCTCGAGTGATTTAGTTAATTTTTCTAGAAATTGGTAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGGATCATTTGAAAGTCCAGCAGCGACGGAATTAATTGAATGTGATGGTGATATTATTCTTGAGCCTTATGAGGGCATGGAATTTGAATCTGAAGATGCTGCTAAAATTTTCTATGATAAGTATGCCCGTCAAGTGGGGTTTGTCATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGGATACTTGCGCGACGACTTGGATGCAATAAAGAGGGGTATTGTGTCAGCATTCGAGGTAAATTTGGGGCAGTTCGGAAGCCTCGGCCGAGCACTCGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCGGGGAAATGGGTGATTACAAAATTTGTAAAGGAGCATAATCATCCTCTTGTGGTTTCGCCCCGCGAAGCTCGGCAGACGATGGTTCGTGTTTCTCTTCCCCCGTTCTTTTATTCTCATCTAACATCATATATTACTATTGTAGATTTGCTTACTTTTTCTCTCAATAAGACTGTATTCTTTGCCAGTGTGTTTTCCTTACTACTCTGCAAAGATGTTTTGGAATTGCAAATGATTGGAATCTGACTTTCTTTAAACAAGGAGAGCTATTTAATGGATCGTTCAAGAGAATCAATTATATTGTTTAGGGAGATGGAAGTGAAAACACCTTTGCCTTACATCTGGCCAACTGTGTAACAGCCCAAGCCCACCGCTAGCAGATAATGTCTTTTTTGGAATTCCTCTCAAGTTTTAAAACGCGTATGCTAGGGAGAAGTTTACACACCCTTATAAAGAATGTTTTGTTCCCCCTCCAATCAATGTGGGATCTCACAATCCTCCCCCCTTCAGAGCCGCTAACACACTATCCGATATCTGACTCTGATATCATTTGTAATAGCTCAAGTCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTCCGGGCTTCCCCTCAAAGTTTTAAAACGGGTTTGCTAAGGAGAGGTTTTCACACTCTTTTAAAGAATGCTTTGTACCCTTCTCCAACTAATGTGGGACCTCACAAACTGTTAACGGGGACTTGTGTGTAAAAGGATTAAATGTCACGTATATAAACTATAGTTGTGACCTTGCTTTAAGGGAGAAGCTTCTAGTTTCATCTGTCTTTCTAATCTTTGTGCCATTCTCCATACTTTGGCCTATATTTTAGATTGTTCCTGACTTTAGTTTCGTATTGCTCAATGTTGTGTTGGGGGTTGTTTTATACCGTTGTGGTGTCTAGCACCATCTAGGATTTTTTCTTTTTCCATTATGAAAGTATTGTTGTGAGATCCCATCTCCGTTGGAGAGGAGAACAAGCCATTCTTTATAAGGGTGTGGAAATCTCTCCCAAGCAGAGATGCGTTTTAAAAACCTTGATTGGAAGCTCGAAAGAGAAGGTCCAAAGAGGACAATATCTATTAGCGGTGGGCTTGGGCCGTTACAATTGTTGTTGTTGTTATTATTATAATAAAGGAACTATGTTACACGAAGTTTCACTTTTAGCGGTTTATTAATAAACCTATTGTGTGTACAGTTTATTGATGCCCATGTCACTGCTATCTCTTTTGCTTGGGAGTATGGTGTGACCATGATTTTCATTTAGATATATTTGGAAGAAACCTGCCCCTTTAACCAACTCAGATGAACCCATCTAGCACATTTAGTTACTCATGAATATCCTACTATCCTAGTTTGGGAAACTAGTGAACTAACACGAGTTCTTCGGATTATTTGTGTATTCTCACAGTTAAAACCTTTCTGTGGGTGATAGATCTGTATTTATGTTGTATCATATGATTAAATGAGTTGATTTTGAATTTTTGCTTGTAGGATGAAAAAGATAAACAAATACAGGAACTCACTACAGAGCTGCGGAATAAGAAACGGTTGTGTTTGACATACCAAGAACAGCTCGCCGCATTTATGAAAATTGTCGAAGAGCATACCGACCAATTATCGAGAAAAGTTCAGAATGTAGTTACCAACCTTAAGGAATTTGAGTCCCTTGAGCAAGAATTGTTGCATCCTAGATAATCCAGCCACAGAGTGAGTATTTGATTGCCTATTGGCTGTTATGCTTCCCCCCAATATTGTCTTTCATCTTAATTTCTTTTCACTGCATCAAAGGTATATCCTATGTCATTTAAGTACAACTATATTCGTATGCAGTGTCGTCGGTGGCCATCGATATTTGGAGCTTGGTAGCGTACGAAGAATAGCGACCACCCTTCAGAAAGCTCCCAAAAGGCATTCTTAACAAATCCGCCCTGCCCCACCCCAAACTCGGAGCAAGCGATGGAAACAAGCGTTATAGAGGAATGACATCATAGCAAGCACTGGCATGAAGAAGAAGTATTTGCAGACATCTGAGAGGAGAGATAATTTTGTAATGTAGAGACAATTTGATTTACCTCCATGAATGGATTTTATTGAATAACCAATGCAGTTCTTCAGAAATCTCTGATTGTGCATATACTGAATCGTCCAAATCCCATCCTAGAATGCCCACATAGCTATAATGAGAGAAGCAAGATTAGAATTGTTCCATTATGCTTATTTTACTACAATTTCTCTGC CACCGTCGTTTTTTACACCCATTTTTCTCCATCGTCGCTCTCTCGGGAAGCTTCTTTCACATAACTTCGCACAACAGACGCCGCCACTCGCCTTCTTTCTTCCTCCTGCCCAATCAATTCTTTTACTTCTAATCAGGGGGTATTGTTTCTAATCGCAGTTCTTATTTCTCTTGTTTCGCCAATCCTCTCGCTTGCAGACTGAATTTCTGATGTCAGGATTGAATTGAATACCCTTAGATACTGTATTGTTCTTCTGGGTTTCATTGTTTGTTGGAAATTGAATTGTCATTTATGTATACTGGACATATTGGGAAATTCGCTTCACAGAGTTTAAAGTAATTGATGAAACTACTTTCCATTTTTGGTTGTTGTGTGGTTTTCCGTTCTTGTGTGCGCCGCCATTTTTCGTTTGGATGATCTAACTTTGCGAATGGGGTATTGTTGATGTTTTGTATCTGCTGTTCTTCGTGTCTCTCCCATTGCTGATGAATTTTCTGCGATCGTCTATCTTTTCTTTTTCTGCTTGTTTCTCGAGTGATTTAGTTAATTTTTCTAGAAATTGGTAACTTTCAGATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGGATCATTTGAAAGTCCAGCAGCGACGGAATTAATTGAATGTGATGGTGATATTATTCTTGAGCCTTATGAGGGCATGGAATTTGAATCTGAAGATGCTGCTAAAATTTTCTATGATAAGTATGCCCGTCAAGTGGGGTTTGTCATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGGATACTTGCGCGACGACTTGGATGCAATAAAGAGGGGTATTGTGTCAGCATTCGAGGTAAATTTGGGGCAGTTCGGAAGCCTCGGCCGAGCACTCGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCGGGGAAATGGGTGATTACAAAATTTGTAAAGGAGCATAATCATCCTCTTGTGGTTTCGCCCCGCGAAGCTCGGCAGACGATGGATGAAAAAGATAAACAAATACAGGAACTCACTACAGAGCTGCGGAATAAGAAACGGTTGTGTTTGACATACCAAGAACAGCTCGCCGCATTTATGAAAATTGTCGAAGAGCATACCGACCAATTATCGAGAAAAGTTCAGAATGTAGTTACCAACCTTAAGGAATTTGAGTCCCTTGAGCAAGAATTGTTGCATCCTAGATAATCCAGCCACAGATGTCGTCGGTGGCCATCGATATTTGGAGCTTGGTAGCGTACGAAGAATAGCGACCACCCTTCAGAAAGCTCCCAAAAGGCATTCTTAACAAATCCGCCCTGCCCCACCCCAAACTCGGAGCAAGCGATGGAAACAAGCGTTATAGAGGAATGACATCATAGCAAGCACTGGCATGAAGAAGAAGTATTTGCAGACATCTGAGAGGAGAGATAATTTTGTAATGTAGAGACAATTTGATTTACCTCCATGAATGGATTTTATTGAATAACCAATGCAGTTCTTCAGAAATCTCTGATTGTGCATATACTGAATCGTCCAAATCCCATCCTAGAATGCCCACATAGCTATAATGAGAGAAGCAAGATTAGAATTGTTCCATTATGCTTATTTTACTACAATTTCTCTGC ATGGATTTGAGAGATAATAGTGAAAGATGTCTTCTGACAGTGGACGCAGATGAGGGAGGATCATTTGAAAGTCCAGCAGCGACGGAATTAATTGAATGTGATGGTGATATTATTCTTGAGCCTTATGAGGGCATGGAATTTGAATCTGAAGATGCTGCTAAAATTTTCTATGATAAGTATGCCCGTCAAGTGGGGTTTGTCATGCGTGTGATGTCCTGTCGTCGTTCTGAAAAAGATGGGAGGATACTTGCGCGACGACTTGGATGCAATAAAGAGGGGTATTGTGTCAGCATTCGAGGTAAATTTGGGGCAGTTCGGAAGCCTCGGCCGAGCACTCGAGAAGGCTGTAAGGCAATGATTCATGTCAAATATGATAAGTCGGGGAAATGGGTGATTACAAAATTTGTAAAGGAGCATAATCATCCTCTTGTGGTTTCGCCCCGCGAAGCTCGGCAGACGATGGATGAAAAAGATAAACAAATACAGGAACTCACTACAGAGCTGCGGAATAAGAAACGGTTGTGTTTGACATACCAAGAACAGCTCGCCGCATTTATGAAAATTGTCGAAGAGCATACCGACCAATTATCGAGAAAAGTTCAGAATGTAGTTACCAACCTTAAGGAATTTGAGTCCCTTGAGCAAGAATTGTTGCATCCTAGATAA MDLRDNSERCLLTVDADEGGSFESPAATELIECDGDIILEPYEGMEFESEDAAKIFYDKYARQVGFVMRVMSCRRSEKDGRILARRLGCNKEGYCVSIRGKFGAVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKQIQELTTELRNKKRLCLTYQEQLAAFMKIVEEHTDQLSRKVQNVVTNLKEFESLEQELLHPR Homology
BLAST of Carg01245 vs. NCBI nr
Match: XP_023538903.1 (protein FAR1-RELATED SEQUENCE 2-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG7027760.1 Protein FAR1-RELATED SEQUENCE 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.1 bits (1141), Expect = 7.0e-121 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Carg01245 vs. NCBI nr
Match: XP_022971297.1 (protein FAR1-RELATED SEQUENCE 2-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 5.9e-120 Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Carg01245 vs. NCBI nr
Match: XP_022951239.1 (protein FAR1-RELATED SEQUENCE 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119 Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 0
BLAST of Carg01245 vs. NCBI nr
Match: XP_022154282.1 (protein FAR1-RELATED SEQUENCE 5 [Momordica charantia]) HSP 1 Score: 428.3 bits (1100), Expect = 3.9e-116 Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Carg01245 vs. NCBI nr
Match: XP_023526121.1 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526122.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526123.1 protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424.9 bits (1091), Expect = 4.4e-115 Identity = 215/227 (94.71%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26 Identity = 58/108 (53.70%), Postives = 76/108 (70.37%), Query Frame = 0
HSP 2 Score: 39.7 bits (91), Expect = 5.2e-02 Identity = 24/72 (33.33%), Postives = 39/72 (54.17%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16 Identity = 62/189 (32.80%), Postives = 102/189 (53.97%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 6.3e-16 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.2e-16 Identity = 49/139 (35.25%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.1e-15 Identity = 52/152 (34.21%), Postives = 71/152 (46.71%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy TrEMBL
Match: A0A6J1I1K3 (protein FAR1-RELATED SEQUENCE 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470056 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120 Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy TrEMBL
Match: A0A6J1GI42 (protein FAR1-RELATED SEQUENCE 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454135 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 8.3e-120 Identity = 219/221 (99.10%), Postives = 219/221 (99.10%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy TrEMBL
Match: A0A6J1DLA3 (protein FAR1-RELATED SEQUENCE 5 OS=Momordica charantia OX=3673 GN=LOC111021572 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116 Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy TrEMBL
Match: A0A6J1J157 (protein FAR1-RELATED SEQUENCE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115 Identity = 215/227 (94.71%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Carg01245 vs. ExPASy TrEMBL
Match: A0A6J1IYB6 (protein FAR1-RELATED SEQUENCE 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481745 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115 Identity = 215/227 (94.71%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Carg01245 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 308.5 bits (789), Expect = 4.2e-84 Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0
BLAST of Carg01245 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 172.6 bits (436), Expect = 3.6e-43 Identity = 93/181 (51.38%), Postives = 128/181 (70.72%), Query Frame = 0
BLAST of Carg01245 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 162.2 bits (409), Expect = 4.9e-40 Identity = 84/178 (47.19%), Postives = 127/178 (71.35%), Query Frame = 0
BLAST of Carg01245 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 148.3 bits (373), Expect = 7.3e-36 Identity = 88/200 (44.00%), Postives = 119/200 (59.50%), Query Frame = 0
BLAST of Carg01245 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 148.3 bits (373), Expect = 7.3e-36 Identity = 88/200 (44.00%), Postives = 119/200 (59.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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