Carg01189 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATAACGAGGAGGCACGGGTGGCGGCCGAATTTGGAGAGGAACGGCGGCGCGGTGGCTGTGAATCTTGAAGGGAAACAAGTTGCTTGGTATTATGATTACGGATTGTCGATGATAACCACCGGATTGAAGATCAAAAACCATCTCTACTGTGGATCTTTCGTGTTTCCCGGCATTCTTCGCCTGAATTTGGACCGGTATCCTGCTAGAACCGCCGGTTGCCCGTGGTCCAACTCTGGCGACCTGTAA ATGGCGATAACGAGGAGGCACGGGTGGCGGCCGAATTTGGAGAGGAACGGCGGCGCGGTGGCTGTGAATCTTGAAGGGAAACAAGTTGCTTGGTATTATGATTACGGATTGTCGATGATAACCACCGGATTGAAGATCAAAAACCATCTCTACTGTGGATCTTTCGTGTTTCCCGGCATTCTTCGCCTGAATTTGGACCGGTATCCTGCTAGAACCGCCGGTTGCCCGTGGTCCAACTCTGGCGACCTGTAA ATGGCGATAACGAGGAGGCACGGGTGGCGGCCGAATTTGGAGAGGAACGGCGGCGCGGTGGCTGTGAATCTTGAAGGGAAACAAGTTGCTTGGTATTATGATTACGGATTGTCGATGATAACCACCGGATTGAAGATCAAAAACCATCTCTACTGTGGATCTTTCGTGTTTCCCGGCATTCTTCGCCTGAATTTGGACCGGTATCCTGCTAGAACCGCCGGTTGCCCGTGGTCCAACTCTGGCGACCTGTAA MAITRRHGWRPNLERNGGAVAVNLEGKQVAWYYDYGLSMITTGLKIKNHLYCGSFVFPGILRLNLDRYPARTAGCPWSNSGDL Homology
BLAST of Carg01189 vs. NCBI nr
Match: KAG6596265.1 (Protein GRIP, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.3 bits (469), Expect = 2.2e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg01189 vs. NCBI nr
Match: KAG7027815.1 (Protein STRICTOSIDINE SYNTHASE-LIKE 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.3 bits (469), Expect = 2.2e-43 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Carg01189 vs. NCBI nr
Match: XP_022971316.1 (protein STRICTOSIDINE SYNTHASE-LIKE 6-like [Cucurbita maxima]) HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42 Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Carg01189 vs. NCBI nr
Match: XP_023540078.1 (protein STRICTOSIDINE SYNTHASE-LIKE 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42 Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Carg01189 vs. NCBI nr
Match: XP_022959122.1 (protein STRICTOSIDINE SYNTHASE-LIKE 6-like [Cucurbita moschata]) HSP 1 Score: 182.2 bits (461), Expect = 1.9e-42 Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy Swiss-Prot
Match: Q9SD05 (Protein STRICTOSIDINE SYNTHASE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SSL6 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.1e-13 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy Swiss-Prot
Match: Q9CAZ7 (Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SSL5 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.3e-11 Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy Swiss-Prot
Match: Q9SD07 (Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SSL4 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.0e-08 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy Swiss-Prot
Match: Q9SD04 (Protein STRICTOSIDINE SYNTHASE-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=SSL7 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.0e-07 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy TrEMBL
Match: A0A6J1I301 (protein STRICTOSIDINE SYNTHASE-LIKE 6-like OS=Cucurbita maxima OX=3661 GN=LOC111470074 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 6.9e-43 Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy TrEMBL
Match: A0A6J1H3P3 (protein STRICTOSIDINE SYNTHASE-LIKE 6-like OS=Cucurbita moschata OX=3662 GN=LOC111460186 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 9.0e-43 Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy TrEMBL
Match: A0A0A0L1J9 (Str_synth domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002390 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 56/83 (67.47%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy TrEMBL
Match: A0A6J1CW15 (protein STRICTOSIDINE SYNTHASE-LIKE 6-like OS=Momordica charantia OX=3673 GN=LOC111014916 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.9e-27 Identity = 56/80 (70.00%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of Carg01189 vs. ExPASy TrEMBL
Match: A0A5D3CHK9 (Protein STRICTOSIDINE SYNTHASE-LIKE 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00350 PE=3 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of Carg01189 vs. TAIR 10
Match: AT3G51440.1 (Calcium-dependent phosphotriesterase superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 5.1e-14 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Carg01189 vs. TAIR 10
Match: AT3G51430.1 (Calcium-dependent phosphotriesterase superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12 Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Carg01189 vs. TAIR 10
Match: AT3G51430.2 (Calcium-dependent phosphotriesterase superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12 Identity = 31/70 (44.29%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of Carg01189 vs. TAIR 10
Match: AT3G51420.1 (strictosidine synthase-like 4 ) HSP 1 Score: 58.5 bits (140), Expect = 2.9e-09 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of Carg01189 vs. TAIR 10
Match: AT3G51450.1 (Calcium-dependent phosphotriesterase superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 1.4e-08 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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