Carg01021 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01021
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSuppressor protein SRP40-like isoform X2
LocationCarg_Chr06: 1612231 .. 1613406 (+)
RNA-Seq ExpressionCarg01021
SyntenyCarg01021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTACCAAACAGATGCCAGTTTTGCTCAGGATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTAAAAAAAATTTTGTTAAAGAGAGTTCATCTTTCCACTTTTTTTGAGTATTTGAGATCTAATCCAAGCAGTTGTTCCAAGGCCAAGAACATAGCACATTGTACCAAGATGGACATCAAATGGAGGTCCCTATCTCTCTCTCTCTTTCTCTTGCTCTAGACTTAAACTCTGATCTGGGTAGTGGTTTTGTCCAATCTCTCTTTCTCTCTGAACTGGTGTTATCTATTTCTCTCTAAAATTTGACATAGGTTTTGTGCCATCTATCTTTTTCTCTAAAATGTGATGTGGGTTTTGTGCTATGTACCTATCTCTCTAAACTTTGATGTGCATTTTGTGGCAGTGGGAACACAATGGAAGGTAGTGAAGTTCTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAAAGAGGAGGCAGAGCTCATGGGCAAAAGGGTACTACCAATGCCAAAGTTCTCCTCATTTTTACTCTAACCGACTTTAGATCATAATTTGGTCCATTTTCCCTATTGTATTTCTTTCAAGCATTTTATCAAACATATTGCAGTCAACAGAGTTAGAGAAGCAAATCACAGAGCAAAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGATGAAAAAGCTCGAATCACTTAACCTTTCTTTCACGATGTTGAACTCAGAACCGTCAATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACCTCTCTCCCAATCAATTCGCAGGCCATCGGTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCTCTACCAGCTCGAGTTCCTCAGATTCAGAAATTTGCTCCAACGAATCTTCGAAAGAAAAGATCGAAAATAGTGGAGATGGATTCAATTCCGTGGACGATTCACTCGCACTTGTGGCCGTGAACTCTCCGGAAGAAACAGAAACCGGCGAGATGAAGCTGGTGATCAGTGAACGGGTAATTGAAGTTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTCAACATGATGAAAGTTAGCCCAGTTTGA

mRNA sequence

AATTACCAAACAGATGCCAGTTTTGCTCAGGATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTAAAAAAAATTTTGTTAAAGAGAGTTCATCTTTCCACTTTTTTTGAGTATTTGAGATCTAATCCAAGCAGTTGTTCCAAGGCCAAGAACATAGCACATTGTACCAAGATGGACATCAAATGGAGTGGGAACACAATGGAAGGTAGTGAAGTTCTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAAAGAGGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAGTTAGAGAAGCAAATCACAGAGCAAAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGATGAAAAAGCTCGAATCACTTAACCTTTCTTTCACGATGTTGAACTCAGAACCGTCAATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACCTCTCTCCCAATCAATTCGCAGGCCATCGGTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCTCTACCAGCTCGAGTTCCTCAGATTCAGAAATTTGCTCCAACGAATCTTCGAAAGAAAAGATCGAAAATAGTGGAGATGGATTCAATTCCGTGGACGATTCACTCGCACTTGTGGCCGTGAACTCTCCGGAAGAAACAGAAACCGGCGAGATGAAGCTGGTGATCAGTGAACGGGTAATTGAAGTTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTCAACATGATGAAAGTTAGCCCAGTTTGA

Coding sequence (CDS)

AATTACCAAACAGATGCCAGTTTTGCTCAGGATCTCCAGCATCTGAAGAAGACAGATTTTCAAAAAAGTTCCTTAAAAAAAATTTTGTTAAAGAGAGTTCATCTTTCCACTTTTTTTGAGTATTTGAGATCTAATCCAAGCAGTTGTTCCAAGGCCAAGAACATAGCACATTGTACCAAGATGGACATCAAATGGAGTGGGAACACAATGGAAGGTAGTGAAGTTCTGAAAACAATGGAGTGCCTGAGAAGAAGATTACTGGCAGAGAGGCAAGCATCATTACTTGCCAAAGAGGAGGCAGAGCTCATGGGCAAAAGGTCAACAGAGTTAGAGAAGCAAATCACAGAGCAAAATCAAATGAGAACAAAAGCAGAAAAGAAGCTTCAATTACTGATGAAAAAGCTCGAATCACTTAACCTTTCTTTCACGATGTTGAACTCAGAACCGTCAATTTCGTCGGAAATTTGCGATGAAGATGAACCGAAAACCCTAACCGCAGCAACCTCTCTCCCAATCAATTCGCAGGCCATCGGTGAAATTTCTCATTCAGACGAAGAGAATCCAAATGCTCGAGGCTCTACCAGCTCGAGTTCCTCAGATTCAGAAATTTGCTCCAACGAATCTTCGAAAGAAAAGATCGAAAATAGTGGAGATGGATTCAATTCCGTGGACGATTCACTCGCACTTGTGGCCGTGAACTCTCCGGAAGAAACAGAAACCGGCGAGATGAAGCTGGTGATCAGTGAACGGGTAATTGAAGTTCTTAATGATCTGAAGCAGGCCAGAGAGAGAATTCAGCGCTCAATGAAGATCTGTGAACTCAACATGATGAAAGTTAGCCCAGTTTGA

Protein sequence

NYQTDASFAQDLQHLKKTDFQKSSLKKILLKRVHLSTFFEYLRSNPSSCSKAKNIAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Homology
BLAST of Carg01021 vs. NCBI nr
Match: KAG7027980.1 (hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.8 bits (1327), Expect = 2.4e-142
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0

Query: 1   NYQTDASFAQDLQHLKKTDFQKSSLKKILLKRVHLSTFFEYLRSNPSSCSKAKNIAHCTK 60
           NYQTDASFAQDLQHLKKTDFQKSSLKKILLKRVHLSTFFEYLRSNPSSCSKAKNIAHCTK
Sbjct: 1   NYQTDASFAQDLQHLKKTDFQKSSLKKILLKRVHLSTFFEYLRSNPSSCSKAKNIAHCTK 60

Query: 61  MDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQM 120
           MDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQM
Sbjct: 61  MDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQM 120

Query: 121 RTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAIGEI 180
           RTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAIGEI
Sbjct: 121 RTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAIGEI 180

Query: 181 SHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEETET 240
           SHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEETET
Sbjct: 181 SHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEETET 240

Query: 241 GEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           GEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 241 GEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 282

BLAST of Carg01021 vs. NCBI nr
Match: XP_023538931.1 (uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.0 bits (998), Expect = 3.4e-104
Identity = 217/228 (95.18%), Postives = 220/228 (96.49%), Query Frame = 0

Query: 55  IAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 114
           +AH TKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI
Sbjct: 1   MAHSTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60

Query: 115 TEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 174
           TEQNQMRTKAEKKLQLL KKLESLNLSFTMLNSEPSISSEICD+DEPKTLT ATSLP NS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDDDEPKTLTTATSLPSNS 120

Query: 175 QAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNS 234
           Q IGEISHSDEENPNARGSTSSSSS SEICSNESSKEKIENSGD FNSV+DSLALVAVNS
Sbjct: 121 QTIGEISHSDEENPNARGSTSSSSSGSEICSNESSKEKIENSGDEFNSVNDSLALVAVNS 180

Query: 235 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           PEE ETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 181 PEEAETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Carg01021 vs. NCBI nr
Match: XP_023005738.1 (uncharacterized protein LOC111498645 [Cucurbita maxima])

HSP 1 Score: 384.4 bits (986), Expect = 8.3e-103
Identity = 215/228 (94.30%), Postives = 221/228 (96.93%), Query Frame = 0

Query: 55  IAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 114
           +AH TK+DIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60

Query: 115 TEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 174
           TEQNQMRTKAEKKLQLL KKLESL+LSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 175 QAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNS 234
           Q IGEISHSDEENPNARG+TSSSSS SEI SNESSKEKIENSG+ FNSVDDSLA VAVNS
Sbjct: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180

Query: 235 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Carg01021 vs. NCBI nr
Match: XP_008442604.2 (PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 1.9e-86
Identity = 200/286 (69.93%), Postives = 236/286 (82.52%), Query Frame = 0

Query: 1   NYQTDASFAQDLQHLKKTDFQKSSL--KKILLKRVHLSTFFEYLRSNPSSCSKAKNIAHC 60
           NYQT A+FA+  QHLKKT F KSSL  KK ++KRV+LSTF +YL  NP +C+KAK ++  
Sbjct: 11  NYQTAATFAKYFQHLKKTVFPKSSLPKKKKIVKRVNLSTFSDYLYCNPDNCAKAKKMSPY 70

Query: 61  TKMDIKWSGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQ 120
           TKMDIKWSGN M EG EV KTMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQIT+Q
Sbjct: 71  TKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQITKQ 130

Query: 121 NQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAI 180
            QM+ +AEKKLQLL KKLESLNLS TM+NSE SISSEIC+EDEPKTL     LP NS+ I
Sbjct: 131 IQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRNSKGI 190

Query: 181 GEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEE 240
            EISHS+EEN NARGST+S+ S S+I S+E SK K  + G  F+SVDDSLA+VAV+SPE+
Sbjct: 191 NEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVDSPEK 250

Query: 241 TETGE-MKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           +ETGE +K VISER+IEVLNDLK+AR RIQ SM+ICE +M++VSPV
Sbjct: 251 SETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295

BLAST of Carg01021 vs. NCBI nr
Match: XP_038906280.1 (uncharacterized protein LOC120092141 [Benincasa hispida])

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-75
Identity = 176/235 (74.89%), Postives = 198/235 (84.26%), Query Frame = 0

Query: 49  CSKAKNIAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRST 108
           C+KAK +A     +IKWSGN MEG EV KTMECLRRRLLAERQASLLAKEEAELMGKRST
Sbjct: 9   CAKAKKMA----PNIKWSGNKMEGGEVSKTMECLRRRLLAERQASLLAKEEAELMGKRST 68

Query: 109 ELEKQITEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAAT 168
           ELEKQIT+Q QM+TKAEKKLQLL KKL SLNLS TM+NSE S+SSEICDEDEPKTL    
Sbjct: 69  ELEKQITKQIQMKTKAEKKLQLLKKKLGSLNLSTTMVNSEASVSSEICDEDEPKTLIEVP 128

Query: 169 SLPINSQAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLA 228
           SL  NS+AIGEISH +EEN NARGSTSS+SS SEICS+E SK KI      F+SVDDSLA
Sbjct: 129 SLLSNSKAIGEISHLEEENRNARGSTSSNSSASEICSDEPSKTKIGKCEKEFDSVDDSLA 188

Query: 229 LVAVNSPEETETG-EMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           +VAVNSP ++ETG E+K +ISER+IEVLNDLK ARE I+ SMKICE+NM++VSPV
Sbjct: 189 IVAVNSPGKSETGDELKPLISERIIEVLNDLKHARETIRSSMKICEVNMIEVSPV 239

BLAST of Carg01021 vs. ExPASy TrEMBL
Match: A0A6J1L305 (uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 4.0e-103
Identity = 215/228 (94.30%), Postives = 221/228 (96.93%), Query Frame = 0

Query: 55  IAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 114
           +AH TK+DIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEK+I
Sbjct: 1   MAHSTKVDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKKI 60

Query: 115 TEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 174
           TEQNQMRTKAEKKLQLL KKLESL+LSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLDLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 175 QAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNS 234
           Q IGEISHSDEENPNARG+TSSSSS SEI SNESSKEKIENSG+ FNSVDDSLA VAVNS
Sbjct: 121 QTIGEISHSDEENPNARGTTSSSSSGSEIFSNESSKEKIENSGEEFNSVDDSLAFVAVNS 180

Query: 235 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV
Sbjct: 181 PEETETGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 228

BLAST of Carg01021 vs. ExPASy TrEMBL
Match: A0A1S3B6U8 (uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 9.0e-87
Identity = 200/286 (69.93%), Postives = 236/286 (82.52%), Query Frame = 0

Query: 1   NYQTDASFAQDLQHLKKTDFQKSSL--KKILLKRVHLSTFFEYLRSNPSSCSKAKNIAHC 60
           NYQT A+FA+  QHLKKT F KSSL  KK ++KRV+LSTF +YL  NP +C+KAK ++  
Sbjct: 11  NYQTAATFAKYFQHLKKTVFPKSSLPKKKKIVKRVNLSTFSDYLYCNPDNCAKAKKMSPY 70

Query: 61  TKMDIKWSGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQ 120
           TKMDIKWSGN M EG EV KTMECLRRRLLAER ASLLAKEEAE+M KRS+ELEKQIT+Q
Sbjct: 71  TKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKEEAEVMDKRSSELEKQITKQ 130

Query: 121 NQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAI 180
            QM+ +AEKKLQLL KKLESLNLS TM+NSE SISSEIC+EDEPKTL     LP NS+ I
Sbjct: 131 IQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNEDEPKTLIEVPPLPRNSKGI 190

Query: 181 GEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEE 240
            EISHS+EEN NARGST+S+ S S+I S+E SK K  + G  F+SVDDSLA+VAV+SPE+
Sbjct: 191 NEISHSEEENRNARGSTASNISASKIYSDEPSKTKTGSCGKEFDSVDDSLAIVAVDSPEK 250

Query: 241 TETGE-MKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           +ETGE +K VISER+IEVLNDLK+AR RIQ SM+ICE +M++VSPV
Sbjct: 251 SETGEQLKPVISERIIEVLNDLKRARGRIQSSMEICE-HMIEVSPV 295

BLAST of Carg01021 vs. ExPASy TrEMBL
Match: A0A6J1CXG5 (uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015099 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.7e-72
Identity = 164/223 (73.54%), Postives = 183/223 (82.06%), Query Frame = 0

Query: 60  KMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQ 119
           K DIKWSGN MEG EVLKTMECLRRRLLAERQAS LAKE+AELM KRS ELEKQITEQ  
Sbjct: 6   KEDIKWSGNKMEGCEVLKTMECLRRRLLAERQASFLAKEKAELMEKRSKELEKQITEQIH 65

Query: 120 MRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAIGE 179
           MRTKAEKKL+LL KKLESLNL  T + SEPS+SSEICD ++PKTL  A+SLP N+QA GE
Sbjct: 66  MRTKAEKKLKLLRKKLESLNLPSTTVKSEPSVSSEICDGEQPKTLITASSLPSNAQATGE 125

Query: 180 ISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEETE 239
           ISHS+E NPNARG  + SSS SEIC ++ SK KIEN GD F S  DS A+VAVNSPE ++
Sbjct: 126 ISHSEEANPNARGCAAPSSSASEICCDKVSKAKIENGGDEFVSTGDSPAVVAVNSPENSK 185

Query: 240 TGEMKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           TGE K  I+E +IEVLNDLK ARERIQ SM+I ELNM+KVSPV
Sbjct: 186 TGEWKPAITEGIIEVLNDLKHARERIQSSMEISELNMIKVSPV 228

BLAST of Carg01021 vs. ExPASy TrEMBL
Match: A0A6J1F6W6 (uncharacterized protein LOC111442665 OS=Cucurbita moschata OX=3662 GN=LOC111442665 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 5.0e-69
Identity = 150/158 (94.94%), Postives = 151/158 (95.57%), Query Frame = 0

Query: 55  IAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 114
           +AHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI
Sbjct: 1   MAHCTKMDIKWSGNTMEGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQI 60

Query: 115 TEQNQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 174
           TEQNQMRTKAEKKLQLL KKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS
Sbjct: 61  TEQNQMRTKAEKKLQLLKKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINS 120

Query: 175 QAIGEISHSDEENPNARGSTSSSSSDSEICSNESSKEK 213
           Q IGEISHSDEENPNARGSTSSS SDSEICSNE    K
Sbjct: 121 QTIGEISHSDEENPNARGSTSSSFSDSEICSNERKDRK 158

BLAST of Carg01021 vs. ExPASy TrEMBL
Match: A0A0A0LDB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 158/226 (69.91%), Postives = 188/226 (83.19%), Query Frame = 0

Query: 59  TKMDIKWSGNTM-EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQ 118
           TKMDIKWSGN M EG EV KTMECLRRRLLAER ASLLAK+EAELM KRS+ELEKQIT+Q
Sbjct: 5   TKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRSSELEKQITKQ 64

Query: 119 NQMRTKAEKKLQLLMKKLESLNLSFTMLNSEPSISSEICDEDEPKTLTAATSLPINSQAI 178
            QM+ +AEKKLQLL KKLESLNLS TM+NSE S+SSEIC+E+EPKT      LP +S+ I
Sbjct: 65  IQMKARAEKKLQLLKKKLESLNLSSTMVNSEASVSSEICNENEPKTPIEVQPLPSHSKGI 124

Query: 179 GEISHSDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDSLALVAVNSPEE 238
            EI HS+EEN NARGSTSS+ S S+I S++ SK KI N G   +SVDDSLA+VAV+SP +
Sbjct: 125 SEIFHSEEENRNARGSTSSNISASKIHSDKPSKTKIGNCGKEIDSVDDSLAIVAVDSPAK 184

Query: 239 TETGE-MKLVISERVIEVLNDLKQARERIQRSMKICELNMMKVSPV 283
           +ET E +K VISER+IEVLNDLK+ARERIQ SMK+C+ +M++VSP+
Sbjct: 185 SETFEQLKPVISERIIEVLNDLKRARERIQSSMKLCD-HMIEVSPI 229

BLAST of Carg01021 vs. TAIR 10
Match: AT2G37300.1 (unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-10
Identity = 60/164 (36.59%), Postives = 92/164 (56.10%), Query Frame = 0

Query: 71  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQL 130
           E  E  +T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ + E+ ++R KAEK+L+L
Sbjct: 6   EKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKL 65

Query: 131 LMKKLESLNLSFT---MLNSEPSISSEIC-----DEDEPKTLTAATSLPINSQAIGEISH 190
           LMKKLE +  S +     +SE S  S +C     +E+E    + A        A   ++ 
Sbjct: 66  LMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVAS 125

Query: 191 SDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDS 227
           ++E + +++    SS   S + S  S KE+    G+ F+   D+
Sbjct: 126 TEEADSSSKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 168

BLAST of Carg01021 vs. TAIR 10
Match: AT2G37300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. )

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-10
Identity = 60/164 (36.59%), Postives = 92/164 (56.10%), Query Frame = 0

Query: 71  EGSEVLKTMECLRRRLLAERQASLLAKEEAELMGKRSTELEKQITEQNQMRTKAEKKLQL 130
           E  E  +T+ECLR RLLAERQ S  AKEEAEL+ ++  ELE+ + E+ ++R KAEK+L+L
Sbjct: 85  EKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKL 144

Query: 131 LMKKLESLNLSFT---MLNSEPSISSEIC-----DEDEPKTLTAATSLPINSQAIGEISH 190
           LMKKLE +  S +     +SE S  S +C     +E+E    + A        A   ++ 
Sbjct: 145 LMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVAS 204

Query: 191 SDEENPNARGSTSSSSSDSEICSNESSKEKIENSGDGFNSVDDS 227
           ++E + +++    SS   S + S  S KE+    G+ F+   D+
Sbjct: 205 TEEADSSSKLKDVSSGEASVVASTSSHKEE-SQFGNEFSWYSDA 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7027980.12.4e-142100.00hypothetical protein SDJN02_09159, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023538931.13.4e-10495.18uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo][more]
XP_023005738.18.3e-10394.30uncharacterized protein LOC111498645 [Cucurbita maxima][more]
XP_008442604.21.9e-8669.93PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo][more]
XP_038906280.11.1e-7574.89uncharacterized protein LOC120092141 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1L3054.0e-10394.30uncharacterized protein LOC111498645 OS=Cucurbita maxima OX=3661 GN=LOC111498645... [more]
A0A1S3B6U89.0e-8769.93uncharacterized protein LOC103486426 OS=Cucumis melo OX=3656 GN=LOC103486426 PE=... [more]
A0A6J1CXG53.7e-7273.54uncharacterized protein LOC111015099 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1F6W65.0e-6994.94uncharacterized protein LOC111442665 OS=Cucurbita moschata OX=3662 GN=LOC1114426... [more]
A0A0A0LDB52.0e-6569.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G37300.12.3e-1036.59unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bac... [more]
AT2G37300.22.3e-1036.59unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..141
NoneNo IPR availableCOILSCoilCoilcoord: 255..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..219
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 182..271
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 53..200
NoneNo IPR availablePANTHERPTHR33701:SF2TRANSMEMBRANE PROTEINcoord: 53..200
NoneNo IPR availablePANTHERPTHR33701TRANSMEMBRANE PROTEINcoord: 182..271

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01021-RACarg01021-RAmRNA