Carg00272 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00272
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr04: 6312795 .. 6313517 (-)
RNA-Seq Expression	Carg00272
Synteny	Carg00272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATCGAGAGAAGAAGAACAATAACAAGAAGCAAAAGCACCACCACCAACCCGGCGGCGCCACCGCCAATCCACCATTTTCAGATTTCTCCTTCAAGCCTTCCGCTGCCGTCAAAGGCCTCCGATTCGGCGGCCAATTCGTCGTTAAATCCTTCACAATCCGGCGAGCTTGGACTATAGAATTTCTCCAACTCCTCTCTCTACCACCGCACCACGACAGCAACCGTCTTCCATTTAATTCCACCGCCGCGTTCCTCCCGACGAATTTCACTATTTTAGCACACCACGCTTGGCATACTCTGACTCTTGGCCTCGGCACCAAGAAATCGAAGGTGATTCTGTTCGTTTTCGCAACGGAGGCTCTAAAAGTCGCCGCTGGCCGTCTTTGGCCGGTGGAAATCCCACTTGGCGAGGCGAATCGGCGGCTGATTAGGGGGCTCAGCGGCTGCGAGATGGCTAGATTTAAATATAGAAAAGGATGCCTAACTTTTTATATCTATGCGGTCCGCGAAAAAGGCTGCTTCGGATTCTCCGCCGCCGATGATTTAAACACAATTTTGCAGGCGGTTACTGCGCTCAACGATTTCTTGGACCACACCGCTATGCTTGCCTTGCCGAATCAGAGAAACATTAGTTATGACGGCGGCGGCAGCGGCGGCGGCAGCAGCAGCAACAGCAACAACAACTTTACAACGCCGCCGGTGGCCGTTGTTCATTGA

mRNA sequence

ATGGAAGATCGAGAGAAGAAGAACAATAACAAGAAGCAAAAGCACCACCACCAACCCGGCGGCGCCACCGCCAATCCACCATTTTCAGATTTCTCCTTCAAGCCTTCCGCTGCCGTCAAAGGCCTCCGATTCGGCGGCCAATTCGTCGTTAAATCCTTCACAATCCGGCGAGCTTGGACTATAGAATTTCTCCAACTCCTCTCTCTACCACCGCACCACGACAGCAACCGTCTTCCATTTAATTCCACCGCCGCGTTCCTCCCGACGAATTTCACTATTTTAGCACACCACGCTTGGCATACTCTGACTCTTGGCCTCGGCACCAAGAAATCGAAGGTGATTCTGTTCGTTTTCGCAACGGAGGCTCTAAAAGTCGCCGCTGGCCGTCTTTGGCCGGTGGAAATCCCACTTGGCGAGGCGAATCGGCGGCTGATTAGGGGGCTCAGCGGCTGCGAGATGGCTAGATTTAAATATAGAAAAGGATGCCTAACTTTTTATATCTATGCGGTCCGCGAAAAAGGCTGCTTCGGATTCTCCGCCGCCGATGATTTAAACACAATTTTGCAGGCGGTTACTGCGCTCAACGATTTCTTGGACCACACCGCTATGCTTGCCTTGCCGAATCAGAGAAACATTAGTTATGACGGCGGCGGCAGCGGCGGCGGCAGCAGCAGCAACAGCAACAACAACTTTACAACGCCGCCGGTGGCCGTTGTTCATTGA

Coding sequence (CDS)

ATGGAAGATCGAGAGAAGAAGAACAATAACAAGAAGCAAAAGCACCACCACCAACCCGGCGGCGCCACCGCCAATCCACCATTTTCAGATTTCTCCTTCAAGCCTTCCGCTGCCGTCAAAGGCCTCCGATTCGGCGGCCAATTCGTCGTTAAATCCTTCACAATCCGGCGAGCTTGGACTATAGAATTTCTCCAACTCCTCTCTCTACCACCGCACCACGACAGCAACCGTCTTCCATTTAATTCCACCGCCGCGTTCCTCCCGACGAATTTCACTATTTTAGCACACCACGCTTGGCATACTCTGACTCTTGGCCTCGGCACCAAGAAATCGAAGGTGATTCTGTTCGTTTTCGCAACGGAGGCTCTAAAAGTCGCCGCTGGCCGTCTTTGGCCGGTGGAAATCCCACTTGGCGAGGCGAATCGGCGGCTGATTAGGGGGCTCAGCGGCTGCGAGATGGCTAGATTTAAATATAGAAAAGGATGCCTAACTTTTTATATCTATGCGGTCCGCGAAAAAGGCTGCTTCGGATTCTCCGCCGCCGATGATTTAAACACAATTTTGCAGGCGGTTACTGCGCTCAACGATTTCTTGGACCACACCGCTATGCTTGCCTTGCCGAATCAGAGAAACATTAGTTATGACGGCGGCGGCAGCGGCGGCGGCAGCAGCAGCAACAGCAACAACAACTTTACAACGCCGCCGGTGGCCGTTGTTCATTGA

Protein sequence

MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWTIEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFATEALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSAADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH

Homology

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BLAST of Carg00272 vs. NCBI nr
Match: KAG7031615.1 (hypothetical protein SDJN02_05656, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.1 bits (1250), Expect = 1.7e-133
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240

[Close]

BLAST of Carg00272 vs. NCBI nr
Match: KAG6601001.1 (hypothetical protein SDJN03_06234, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483.8 bits (1244), Expect = 8.6e-133
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPGGATANPP SDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGGATANPPLSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240

[Close]

BLAST of Carg00272 vs. NCBI nr
Match: XP_022957098.1 (uncharacterized protein LOC111458581 [Cucurbita moschata])

HSP 1 Score: 478.4 bits (1230), Expect = 3.6e-131
Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPGGATANPP SDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGGATANPPLSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSS---SNSNNNFTTPPVA 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSS   SNSNNNFTTPPVA
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSNSNSNSNNNFTTPPVA 240

[Close]

BLAST of Carg00272 vs. NCBI nr
Match: XP_022984700.1 (uncharacterized protein LOC111482900 [Cucurbita maxima])

HSP 1 Score: 471.5 bits (1212), Expect = 4.4e-129
Identity = 233/240 (97.08%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPGGATANPP SDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGGATANPPLSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNST AFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTVAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISY GGG  GG SS+SNNNFTTPPVAVVH
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYGGGGGRGGGSSSSNNNFTTPPVAVVH 240

[Close]

BLAST of Carg00272 vs. NCBI nr
Match: XP_023549491.1 (uncharacterized protein LOC111807888 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 234/240 (97.50%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPG ATANPP SDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGAATANPPLSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYD GGSGGG   NSNNNFTTPPVAVVH
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDSGGSGGG---NSNNNFTTPPVAVVH 237

[Close]

BLAST of Carg00272 vs. ExPASy TrEMBL
Match: A0A6J1GZ93 (uncharacterized protein LOC111458581 OS=Cucurbita moschata OX=3662 GN=LOC111458581 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.7e-131
Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPGGATANPP SDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGGATANPPLSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSS---SNSNNNFTTPPVA 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSS   SNSNNNFTTPPVA
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSNSNSNSNNNFTTPPVA 240

[Close]

BLAST of Carg00272 vs. ExPASy TrEMBL
Match: A0A6J1J9B5 (uncharacterized protein LOC111482900 OS=Cucurbita maxima OX=3661 GN=LOC111482900 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129
Identity = 233/240 (97.08%), Postives = 234/240 (97.50%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           MEDREKKNNNKKQKHHHQPGGATANPP SDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT
Sbjct: 1   MEDREKKNNNKKQKHHHQPGGATANPPLSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
           IEFLQLLSLPPHHDSNRLPFNST AFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT
Sbjct: 61  IEFLQLLSLPPHHDSNRLPFNSTVAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120

Query: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180
           EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA
Sbjct: 121 EALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCFGFSA 180

Query: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPVAVVH 240
           ADDLNTILQAVTALNDFLDHTAMLALPNQRNISY GGG  GG SS+SNNNFTTPPVAVVH
Sbjct: 181 ADDLNTILQAVTALNDFLDHTAMLALPNQRNISYGGGGGRGGGSSSSNNNFTTPPVAVVH 240

[Close]

BLAST of Carg00272 vs. ExPASy TrEMBL
Match: A0A1S3CF88 (uncharacterized protein LOC103500208 OS=Cucumis melo OX=3656 GN=LOC103500208 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.1e-104
Identity = 199/249 (79.92%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           ME  EKKNNNKKQKHHHQ G AT NP  SD+SFKPS AVKGLRFGGQFVVKSFTIRRAW 
Sbjct: 1   MEIPEKKNNNKKQKHHHQSGAATPNPSLSDYSFKPSTAVKGLRFGGQFVVKSFTIRRAWP 60

Query: 61  IEFLQLLSLPPHHD---------SNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKS 120
           +EFLQLLSLPP +D         + RLPFNST AF+PTNFTILAHHAWHTLTLGLGTKKS
Sbjct: 61  LEFLQLLSLPPRYDGGIHDDDGGNKRLPFNSTVAFVPTNFTILAHHAWHTLTLGLGTKKS 120

Query: 121 KVILFVFATEALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVR 180
           K ILFVFATEALK AAGR+WP EI LG+ NRRLIRGLSGCEMARFK+RKGCLTFYIYAVR
Sbjct: 121 KAILFVFATEALKAAAGRVWPAEIALGDVNRRLIRGLSGCEMARFKFRKGCLTFYIYAVR 180

Query: 181 EKGCFGFSAADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNF 240
           EKGCFGFSAADDL TILQAV +LNDFLDHTAMLALPNQRNI+Y     GGGSS      F
Sbjct: 181 EKGCFGFSAADDLKTILQAVVSLNDFLDHTAMLALPNQRNITY-----GGGSS------F 238

[Close]

BLAST of Carg00272 vs. ExPASy TrEMBL
Match: A0A0A0KQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G181490 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.9e-101
Identity = 192/244 (78.69%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           ME    K++NKKQKHHHQ    T NPP SD+SFKPSAAVKGLRFGGQFVVKSFTIRR W 
Sbjct: 1   MEIPVNKSHNKKQKHHHQSAAVTPNPPLSDYSFKPSAAVKGLRFGGQFVVKSFTIRRVWP 60

Query: 61  IEFLQLLSLPPHHD----SNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILF 120
           +EFLQLLSLPP +D    + R PFNSTAAFLPTNFTILAHHAW+TLTLGLGTKKSK ILF
Sbjct: 61  LEFLQLLSLPPRYDDDDCNKRPPFNSTAAFLPTNFTILAHHAWNTLTLGLGTKKSKAILF 120

Query: 121 VFATEALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCF 180
           VFATEALK AAGR+WP EI  G+ NRRLIRGLSGCEMARFK+RKGCLTFYIYAVREKGCF
Sbjct: 121 VFATEALKAAAGRVWPAEIAFGDVNRRLIRGLSGCEMARFKFRKGCLTFYIYAVREKGCF 180

Query: 181 GFSAADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNNNFTTPPV 240
           GFSAADDL TILQAV +LNDFLDHTAMLALPNQRNISY GGGS          +FTT PV
Sbjct: 181 GFSAADDLKTILQAVVSLNDFLDHTAMLALPNQRNISYSGGGS----------SFTTAPV 234

[Close]

BLAST of Carg00272 vs. ExPASy TrEMBL
Match: A0A6J1FQS4 (uncharacterized protein LOC111447604 OS=Cucurbita moschata OX=3662 GN=LOC111447604 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.6e-100
Identity = 192/251 (76.49%), Postives = 202/251 (80.48%), Query Frame = 0


Query: 1   MEDREKK--NNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRA 60
           ME+REKK  NNNKKQKH HQ GGATANP  +DFSFKPS AVKGLRFG QFVVKSFTIRRA
Sbjct: 1   MENREKKNDNNNKKQKHRHQSGGATANPALTDFSFKPSTAVKGLRFGAQFVVKSFTIRRA 60

Query: 61  WTIEFLQLLSLPPHHD---------SNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTK 120
           W +EFLQLLSLPPHHD          NRLPFNSTA FLPTNFTILAHHAWH LTLGLGTK
Sbjct: 61  WPLEFLQLLSLPPHHDGNTDSDNNNQNRLPFNSTAVFLPTNFTILAHHAWHNLTLGLGTK 120

Query: 121 KSKVILFVFATEALKVAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYA 180
           KSKVILFVF TEALK A G  WP E+ LG+ NRRLIRGLSGCEMARFK+RKGCLTFY+YA
Sbjct: 121 KSKVILFVFETEALKAAVGHRWPAEMTLGDVNRRLIRGLSGCEMARFKFRKGCLTFYVYA 180

Query: 181 VREKGCFGFSAADDLNTILQAVTALNDFLDHTAMLALPNQRNISYDGGGSGGGSSSNSNN 240
           VRE+GCFGFSAADDL  ILQAV ALNDFLD+TAMLALP+QR ISY G GS          
Sbjct: 181 VRERGCFGFSAADDLKRILQAVIALNDFLDYTAMLALPHQRTISYGGAGS---------- 240

[Close]

BLAST of Carg00272 vs. TAIR 10
Match: AT3G55420.1 (unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-70
Identity = 136/218 (62.39%), Postives = 165/218 (75.69%), Query Frame = 0


Query: 1   MEDREKKNNNKKQKHHHQPGGATANPPFSDFSFKPSAAVKGLRFGGQFVVKSFTIRRAWT 60
           M ++EKK   KK+K  HQ          SD SFKPS+ VKGL+FGGQ +VKSFTIRRA T
Sbjct: 1   MAEKEKKTKKKKKKEKHQS---------SDISFKPSSDVKGLKFGGQIIVKSFTIRRART 60

Query: 61  IEFLQLLSLPPHHDSNRLPFNSTAAFLPTNFTILAHHAWHTLTLGLGTKKSKVILFVFAT 120
            E L+LLSLP    S+  P  STAA+LPTNFTILAHHAWHTLTLGLGT+KSKV++FVF T
Sbjct: 61  FELLKLLSLP---SSSSPPLLSTAAYLPTNFTILAHHAWHTLTLGLGTRKSKVVVFVFET 120

Query: 121 EALK----VAAGRLWPVEIPLGEANRRLIRGLSGCEMARFKYRKGCLTFYIYAVREKGCF 180
           EA+K     A G +WP EIPLG+ N+++IR L   EMARFK+RKGC+TFY+YAVR  G  
Sbjct: 121 EAMKSSVVAAEGGIWPSEIPLGDVNKKMIRKLKNWEMARFKFRKGCITFYVYAVRNAGNE 180

Query: 181 GFSAADDLNTILQAVTALNDFLDHTAMLALPNQRNISY 215
           GF+AA+DL  ILQAV AL DF+DHTAML +P+Q++I+Y
Sbjct: 181 GFAAAEDLKVILQAVVALKDFMDHTAMLVMPHQKSINY 206

The following BLAST results are available for this feature:

BLAST of Carg00272 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031615.1	1.7e-133	100.00	hypothetical protein SDJN02_05656, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6601001.1	8.6e-133	99.58	hypothetical protein SDJN03_06234, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022957098.1	3.6e-131	98.35	uncharacterized protein LOC111458581 [Cucurbita moschata]	[more]
XP_022984700.1	4.4e-129	97.08	uncharacterized protein LOC111482900 [Cucurbita maxima]	[more]
XP_023549491.1	1.7e-128	97.50	uncharacterized protein LOC111807888 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg00272 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg00272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ93	1.7e-131	98.35	uncharacterized protein LOC111458581 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]
A0A6J1J9B5	2.1e-129	97.08	uncharacterized protein LOC111482900 OS=Cucurbita maxima OX=3661 GN=LOC111482900...	[more]
A0A1S3CF88	4.1e-104	79.92	uncharacterized protein LOC103500208 OS=Cucumis melo OX=3656 GN=LOC103500208 PE=...	[more]
A0A0A0KQ89	1.9e-101	78.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G181490 PE=4 SV=1	[more]
A0A6J1FQS4	3.6e-100	76.49	uncharacterized protein LOC111447604 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]

BLAST of Carg00272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55420.1	2.9e-70	62.39	unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR36375	OS05G0459300 PROTEIN	coord: 1..215
None	No IPR available	PANTHER	PTHR36375:SF1	OS05G0459300 PROTEIN	coord: 1..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00272-RA	Carg00272-RA	mRNA