Carg00234 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00234
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Polyketide cyclase/dehydrase and lipid transport superfamily protein
Location	Carg_Chr04: 6065807 .. 6066441 (-)
RNA-Seq Expression	Carg00234
Synteny	Carg00234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGATTTGCTATCTGAGATAATTTGGAGGACAAGCACAGGCATGAACATGGTGAGTTGAAAACTTCTTTGTTTATATTTTCCCCTTGAAACTTTGGTTTTGGGTTTGTTTGTATTTTGCAAGTGCTGCTGATGCAGGCATATCAGGGAAAGAACGGGAAATGGGAAGGATCAGTAGGGGGTTTAGTTGATGCTCCTGTGGACAAAGTATGGCCCTTGGTCACTGAATCCAAAAGGCTGCCGGAGTGGATGCCAATGGTCGAGAGATGCACCGACATAACCGGAGACGAAGGCATCCCAGGCTATGTACGGGTCGTGTCGGGTTTCATGTTCCCGCAGAAAGACGGAGAAAGATCATGGATCAAAGAGAAGTTGCTTTCCATGGACTCATCAGCTCATAGTTACAGTTACAAAATGGAAGCAAGCAATGTGGGATTAGATGGATCCACCAACACATTAAAGCTTGTGGACTATGGAGAAGATTCAACATTGATTGAATGGAAGTTTGAGATAAATCCTTTGGAAGGTGTTTGTGAAGAGAGCATCATTGATTATCTGGGATTTCTCTACAAATCTTGCATCAACAGAATTGAAGGTGCGATTGAAGTAGCTGCACATTCTAAAAAAGTTTGA

mRNA sequence

ATGATCGATTTGCTATCTGAGATAATTTGGAGGACAAGCACAGGCATGAACATGGCATATCAGGGAAAGAACGGGAAATGGGAAGGATCAGTAGGGGGTTTAGTTGATGCTCCTGTGGACAAAGTATGGCCCTTGGTCACTGAATCCAAAAGGCTGCCGGAGTGGATGCCAATGGTCGAGAGATGCACCGACATAACCGGAGACGAAGGCATCCCAGGCTATGTACGGGTCGTGTCGGGTTTCATGTTCCCGCAGAAAGACGGAGAAAGATCATGGATCAAAGAGAAGTTGCTTTCCATGGACTCATCAGCTCATAGTTACAGTTACAAAATGGAAGCAAGCAATGTGGGATTAGATGGATCCACCAACACATTAAAGCTTGTGGACTATGGAGAAGATTCAACATTGATTGAATGGAAGTTTGAGATAAATCCTTTGGAAGGTGTTTGTGAAGAGAGCATCATTGATTATCTGGGATTTCTCTACAAATCTTGCATCAACAGAATTGAAGGTGCGATTGAAGTAGCTGCACATTCTAAAAAAGTTTGA

Coding sequence (CDS)

ATGATCGATTTGCTATCTGAGATAATTTGGAGGACAAGCACAGGCATGAACATGGCATATCAGGGAAAGAACGGGAAATGGGAAGGATCAGTAGGGGGTTTAGTTGATGCTCCTGTGGACAAAGTATGGCCCTTGGTCACTGAATCCAAAAGGCTGCCGGAGTGGATGCCAATGGTCGAGAGATGCACCGACATAACCGGAGACGAAGGCATCCCAGGCTATGTACGGGTCGTGTCGGGTTTCATGTTCCCGCAGAAAGACGGAGAAAGATCATGGATCAAAGAGAAGTTGCTTTCCATGGACTCATCAGCTCATAGTTACAGTTACAAAATGGAAGCAAGCAATGTGGGATTAGATGGATCCACCAACACATTAAAGCTTGTGGACTATGGAGAAGATTCAACATTGATTGAATGGAAGTTTGAGATAAATCCTTTGGAAGGTGTTTGTGAAGAGAGCATCATTGATTATCTGGGATTTCTCTACAAATCTTGCATCAACAGAATTGAAGGTGCGATTGAAGTAGCTGCACATTCTAAAAAAGTTTGA

Protein sequence

MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVERCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDGSTNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSKKV

Homology

[Close]

BLAST of Carg00234 vs. NCBI nr
Match: KAG6600945.1 (Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031577.1 Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379.8 bits (974), Expect = 1.3e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE
Sbjct: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG
Sbjct: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK
Sbjct: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180

Query: 181 KV 183
           KV
Sbjct: 181 KV 182

[Close]

BLAST of Carg00234 vs. NCBI nr
Match: XP_022957397.1 (uncharacterized protein LOC111458808 [Cucurbita moschata])

HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVT+SKRLPEWMPMVE
Sbjct: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTQSKRLPEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTDIT DEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG
Sbjct: 61  RCTDITRDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK
Sbjct: 121 SINTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180

Query: 181 KV 183
           KV
Sbjct: 181 KV 182

[Close]

BLAST of Carg00234 vs. NCBI nr
Match: XP_022988648.1 (uncharacterized protein LOC111485886 [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           MI LLSEIIWRTSTGMNMAYQGKNGKWEGSVGGL+DAPVDKVWPLVT+SKRL EWMPMVE
Sbjct: 1   MIGLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLIDAPVDKVWPLVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTDITGDEGIPGYVRVVSGFMFP+KD ERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG
Sbjct: 61  RCTDITGDEGIPGYVRVVSGFMFPKKDEERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK
Sbjct: 121 SINTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180

Query: 181 KV 183
           KV
Sbjct: 181 KV 182

[Close]

BLAST of Carg00234 vs. NCBI nr
Match: XP_023512638.1 (uncharacterized protein LOC111777326 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363.6 bits (932), Expect = 9.8e-97
Identity = 174/182 (95.60%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           MI LLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVT+SKRL EWMPMVE
Sbjct: 1   MIGLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTDITGDEG PGY+RVVSGFMFPQKDGERSWIKEKLLSMDSSA SYSYKMEASNVGLDG
Sbjct: 61  RCTDITGDEGTPGYIRVVSGFMFPQKDGERSWIKEKLLSMDSSARSYSYKMEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIID+LGFLYKSCINRIEGAIEVAAHSK
Sbjct: 121 SINTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDFLGFLYKSCINRIEGAIEVAAHSK 180

Query: 181 KV 183
           KV
Sbjct: 181 KV 182

[Close]

BLAST of Carg00234 vs. NCBI nr
Match: XP_008463214.1 (PREDICTED: uncharacterized protein LOC103501420 isoform X1 [Cucumis melo] >KAA0037343.1 Polyketide cyclase/dehydrase [Cucumis melo var. makuwa] >TYJ97564.1 Polyketide cyclase/dehydrase [Cucumis melo var. makuwa])

HSP 1 Score: 330.9 bits (847), Expect = 7.1e-87
Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           M  LLSEIIW   TGM+MAYQGKNGKW+GSVGGLVDAP+DKVWP+VT+SKRL EWMPMVE
Sbjct: 1   MFGLLSEIIWSRGTGMSMAYQGKNGKWQGSVGGLVDAPMDKVWPVVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTD+ G+EG+PGY RVVSGFMFP KDGERSWI+EKLLSMD SAH YSYK+EASNVGLDG
Sbjct: 61  RCTDVAGEEGVPGYERVVSGFMFPLKDGERSWIREKLLSMDPSAHCYSYKLEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAI+ AA   
Sbjct: 121 SVNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIQAAAAES 180

Query: 181 K 182
           K
Sbjct: 181 K 181

[Close]

BLAST of Carg00234 vs. ExPASy TrEMBL
Match: A0A6J1GZ04 (uncharacterized protein LOC111458808 OS=Cucurbita moschata OX=3662 GN=LOC111458808 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.0e-100
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVT+SKRLPEWMPMVE
Sbjct: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTQSKRLPEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTDIT DEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG
Sbjct: 61  RCTDITRDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK
Sbjct: 121 SINTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180

Query: 181 KV 183
           KV
Sbjct: 181 KV 182

[Close]

BLAST of Carg00234 vs. ExPASy TrEMBL
Match: A0A6J1JMX2 (uncharacterized protein LOC111485886 OS=Cucurbita maxima OX=3661 GN=LOC111485886 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           MI LLSEIIWRTSTGMNMAYQGKNGKWEGSVGGL+DAPVDKVWPLVT+SKRL EWMPMVE
Sbjct: 1   MIGLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLIDAPVDKVWPLVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTDITGDEGIPGYVRVVSGFMFP+KD ERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG
Sbjct: 61  RCTDITGDEGIPGYVRVVSGFMFPKKDEERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK
Sbjct: 121 SINTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180

Query: 181 KV 183
           KV
Sbjct: 181 KV 182

[Close]

BLAST of Carg00234 vs. ExPASy TrEMBL
Match: A0A5D3BER3 (Polyketide cyclase/dehydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00880 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.4e-87
Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           M  LLSEIIW   TGM+MAYQGKNGKW+GSVGGLVDAP+DKVWP+VT+SKRL EWMPMVE
Sbjct: 1   MFGLLSEIIWSRGTGMSMAYQGKNGKWQGSVGGLVDAPMDKVWPVVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTD+ G+EG+PGY RVVSGFMFP KDGERSWI+EKLLSMD SAH YSYK+EASNVGLDG
Sbjct: 61  RCTDVAGEEGVPGYERVVSGFMFPLKDGERSWIREKLLSMDPSAHCYSYKLEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAI+ AA   
Sbjct: 121 SVNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIQAAAAES 180

Query: 181 K 182
           K
Sbjct: 181 K 181

[Close]

BLAST of Carg00234 vs. ExPASy TrEMBL
Match: A0A1S3CIR2 (uncharacterized protein LOC103501420 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501420 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.4e-87
Identity = 154/181 (85.08%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           M  LLSEIIW   TGM+MAYQGKNGKW+GSVGGLVDAP+DKVWP+VT+SKRL EWMPMVE
Sbjct: 1   MFGLLSEIIWSRGTGMSMAYQGKNGKWQGSVGGLVDAPMDKVWPVVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTD+ G+EG+PGY RVVSGFMFP KDGERSWI+EKLLSMD SAH YSYK+EASNVGLDG
Sbjct: 61  RCTDVAGEEGVPGYERVVSGFMFPLKDGERSWIREKLLSMDPSAHCYSYKLEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHSK 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAI+ AA   
Sbjct: 121 SVNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIQAAAAES 180

Query: 181 K 182
           K
Sbjct: 181 K 181

[Close]

BLAST of Carg00234 vs. ExPASy TrEMBL
Match: A0A0A0KM19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198230 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87
Identity = 154/179 (86.03%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MIDLLSEIIWRTSTGMNMAYQGKNGKWEGSVGGLVDAPVDKVWPLVTESKRLPEWMPMVE 60
           M  LLSEIIW   TGM+MAYQGK+GKW+GSVGGLVDAP+DKVWP+VT+SKRL EWMPMVE
Sbjct: 1   MFGLLSEIIWSRGTGMSMAYQGKSGKWQGSVGGLVDAPIDKVWPVVTQSKRLQEWMPMVE 60

Query: 61  RCTDITGDEGIPGYVRVVSGFMFPQKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDG 120
           RCTD+ GDEG+PGY RVVSGFMFP KDGERSWI+EKLLSMD SAH YSYK+EASNVGLDG
Sbjct: 61  RCTDVAGDEGVPGYERVVSGFMFPLKDGERSWIREKLLSMDPSAHCYSYKLEASNVGLDG 120

Query: 121 STNTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIEVAAHS 180
           S NTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAI+ AA S
Sbjct: 121 SINTLKLVDYGEDSTLIEWKFEINPLEGVCEESIIDYLGFLYKSCINRIEGAIKAAAKS 179

[Close]

BLAST of Carg00234 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 26  KWEGSVG-GLVDAPVDKVWPLVTESKRLPEWMPMVERCTDITGDEGIPGYVRVVSGFMFP 85
           KW   V   L  A  D++WPL T+   L +W+P +  C  + G+ G  G +R  SGF   
Sbjct: 9   KWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSGFSIG 68

Query: 86  QK--DGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDGSTNTLKLVDYGEDSTLIEWKFE 145
               D    W KEKL++++       Y++  SN G +   +T+K++  GED  +IEW F 
Sbjct: 69  SNGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDGCVIEWSFT 128

Query: 146 INPLEGVCEESII 156
           ++P+ G+  E+++
Sbjct: 129 VDPVRGLSLENLV 141

[Close]

BLAST of Carg00234 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 26  KWEGSVG-GLVDAPVDKVWPLVTESKRLPEWMPMVERCTDITGDEGIPGYVRVVSGFMFP 85
           KW   V   L  A  D++WPL T+   L +W+P +  C  + G+ G  G +R  SGF   
Sbjct: 9   KWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFCSGFSIG 68

Query: 86  QK--DGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDGSTNTLKLVDYGEDSTLIEWKFE 145
               D    W KEKL++++       Y++  SN G +   +T+K++  GED  +IEW F 
Sbjct: 69  SNGVDSAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGEDGCVIEWSFT 128

Query: 146 INPLEGVCEESII 156
           ++P+ G+  E+++
Sbjct: 129 VDPVRGLSLENLV 141

[Close]

BLAST of Carg00234 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 8.2e-17
Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 0


Query: 26  KWEG-SVGGLVDAPVDKVWPLVTESKRLPEWMPMVERCTDITGDEGIPGYVRVVSGFMFP 85
           KWEG  V  +     +KVW + ++   + EW P V+ C  + G +G+PG +R  S     
Sbjct: 9   KWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCSTTK-T 68

Query: 86  QKDGERSWIKEKLLSMDSSAHSYSYKMEASNVGLDGSTNTLKL--VDYGEDSTLIEWKFE 145
           +++G R W KEKL+ +D      SY++  +NVG      T+++  VD  +  + IEW F 
Sbjct: 69  KEEGSR-WAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSRIEWSFV 128

Query: 146 INPLEGVCEESIIDYLGFLYKSCINRIE 171
            +P++G  +E +  Y+ F  +   N++E
Sbjct: 129 ADPVDGWKKEDLESYVDFCLQHMANKME 154

The following BLAST results are available for this feature:

BLAST of Carg00234 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600945.1	1.3e-101	100.00	Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022957397.1	1.2e-99	98.35	uncharacterized protein LOC111458808 [Cucurbita moschata]	[more]
XP_022988648.1	2.6e-97	96.15	uncharacterized protein LOC111485886 [Cucurbita maxima]	[more]
XP_023512638.1	9.8e-97	95.60	uncharacterized protein LOC111777326 [Cucurbita pepo subsp. pepo]	[more]
XP_008463214.1	7.1e-87	85.08	PREDICTED: uncharacterized protein LOC103501420 isoform X1 [Cucumis melo] >KAA00...	[more]

BLAST of Carg00234 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg00234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ04	6.0e-100	98.35	uncharacterized protein LOC111458808 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JMX2	1.3e-97	96.15	uncharacterized protein LOC111485886 OS=Cucurbita maxima OX=3661 GN=LOC111485886...	[more]
A0A5D3BER3	3.4e-87	85.08	Polyketide cyclase/dehydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CIR2	3.4e-87	85.08	uncharacterized protein LOC103501420 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KM19	4.5e-87	86.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198230 PE=3 SV=1	[more]

BLAST of Carg00234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25770.1	2.6e-18	32.33	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT2G25770.2	2.6e-18	32.33	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT4G32870.1	8.2e-17	31.08	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019587	Polyketide cyclase/dehydrase	PFAM	PF10604	Polyketide_cyc2	coord: 35..149 e-value: 3.0E-16 score: 60.0
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 19..180 e-value: 5.4E-38 score: 132.8
None	No IPR available	PANTHER	PTHR33789:SF5	LACHRYMATORY-FACTOR SYNTHASE	coord: 19..177
None	No IPR available	PANTHER	PTHR33789	LACHRYMATORY-FACTOR SYNTHASE	coord: 19..177
None	No IPR available	CDD	cd07821	PYR_PYL_RCAR_like	coord: 35..174 e-value: 2.49419E-31 score: 108.565
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 35..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00234-RA	Carg00234-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0004864	protein phosphatase inhibitor activity