Carg00221 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGTCAGCACTGTTTTAATTTCAAATTTTTCACTGAGCAGGTTTCCTGAAAGTCGAGACGATCTTGGAGCAAAAATTAGAAGAGATGCCCACAATGAAGAGGTTATTCTCAGCGGTCTGTTTATGGATCTTGTTTCTGATTGCCACAATTGTCTTGATTCTGGTAAGAATTTTCCGTATCCATCTTCCATTTATCTTGAATGGAGAAGATCAGAGCTCCCAATTTCAGTTTCTAAAATGTCTTTGTTCTTCTTCGTTATGATTTTTTCTTGCTTTTCGCAGAACAAATTAAATGATAGTGGTGTCTCGTCCGAACTAAAGGTTGTCGATGAAGTGAGTTACTGTTTCTTCACTCTCCGTGTATCTCTTCAATCAAACAGAACTCACTTTAGTCATTGATTACAGGAAATCAAATTGGGGAAGAATCCTACGACGGTGACTCACAGAGTATACTTTGATATCGAAATCGGCGGAAAGCCCTCTGGTATGGCCCATTTCTTTTTACTTTCTCACTGTCGAACTAGTTCGAAAATTTTCGATCCAATCTTGCCTAGGGAGGTGGGTTTTGTTTAAGAAACCTAATGTAAGGTCAGGATAATCATTAGTTTCTCGAGTGGAATGAGAGTGATCAAGTAGGAGAGTATGAGACTGGGCGTGTCTTTTGATGAGCTTTGCTGTGTCCTTGTAATGAATTCTAGTCAAAACTCATATTAGGGTGGATTCATTATGGGTGCAATCAGATCATTTTGTTTTCTTAATGGAATTTCATTGTCAAACTTAATGATTCATCCTGTCTAGTGAACTACTTGCTAGAATCCATATCAGTGTTAATGGAGGAATTAGAAACCTGTAAAAGAGTATTAGGGGCAAATGCAAAAGTTGGGTGAAGAGTGATGACTCCTACAAAGATCGATCTCAATAAAATTTTCATATCTCGAGGAACATTGGGTAGTCAGGAAATCTTGCAAGCCTAAAGAAGGAAGAAAAACATGGCTAAGATTTGCTTCTGTTTTTTATATTTTGAACCAGAAACATATATTTATTCAAAAGTGGCAACTCATTTGAAGATCTTCCATAACAAATTTCTTTCTCACAGGACGAGTTGTCATTGGCCTATTTGGAGAAACAGTCCCTAAAACCGCAGGTAAGGAGCTAGTTCAATGATTCTTTGATGACTGTTTTTGTCTTCCTATAGAAGGCTCTGATTATTCTACTTCTATATGTGTGTTCTGCAGAGAATTTTCGCGCTCTTTGCACGGGTAGCCAAGTAGATTTTGCTCTTCAATAGTTAGGTTTCTCTTCATATTGATTGAAGCAGCAAACATTTATTTAGTTTTCTGCTAAAATATTGTTATGTTTTGAAAATTTATAAATAATTCGTTTAATCTTGTTCTAGGAGAGAAAGGAATGGGGAGGAGCGGGAAGCCTCTACATTACAAAGGAAGCAAGTTCCATAGGATCATTCCCAGTTTTATGATACAGGGAGGTGATTTTACTCGTGGAGATGGCCGAGGTGGAGAGTCAATATATGGCGAAAAGTTTGCAGATGAAAATTTCCAATTGAAACATGATGGTCCAGGTAATCTTGACTACTTGAATGTTTCAACAGCAAGTTAATTGAACATGAACACTGGAATTTGAGGACTCTAATATTTGATTTGAACTTACTTTTGGAACCTACTCCTGTCTTGAATGAATGGTTTGGCTTTTTATCAGGTTTTGTGTCGATGGCAAACTCTGGGGAGGACACAAACGGATCGCAGTTCTTTATTACGACTGTTAAAACTAGCTGGTAAATGTTTCATTTGAAAGGTTGACGCAGTTCCTTGTGGAATGAACTTTTCAAAATCTGTTTGCTTATTTCATAGGTTGGATGGGCACCATGTTGTGTTTGGAAAAGTGCTTTCGGGCATGGATGTTGTGTTCAAGATGGAAGCCGAAGGAAGTCAGGGGGATGGAAAACCAAAGACTGAAGTTTACATTTCAGAAAGTGGAGAACTTCCAGTCTAGTTCTGGAAACAGAGATTGTTGATAACAAAGGTCCTCTCTCCCTACAACTTTCTCTCTAGTGAGATGTAGGCATCAGCTTCACTTTAGAATTGATCATTCCAATGGCATTTAATGTTCTCATTCACATTATTTATCATTTCTATACAATGGACTGTTATCTTCGTAAAATGTCAAGATTTTCCTTCTAAAAATGGTAGATTGGTGTTGAAGTTTTAGCATCTTCCATGAACACAACAAGCACAAACACACTTCATCTTCTTTTAGAGATTCCTATTCAGAAAAGTTTTCAAAATGAGCACATCATCTTCCTTTTGTGGATTCCGAATTTAGAACAACTTTTATTGAAACAGATACCGACTGCAAAATCAACAGATTTGATTGAATGATATCTTCAAATATCTCACTTACTATATCTACTTAATACCATGATTTGTGTTAATAAGTAGATATTTAGTAAAAGAAAGATTTTTTTTTTCTAAAATATCCTCACCTTTCTACTGTTTGATCGTTCATGTATTTTGGGTAAAGAACAGCACGGCAGCACCCTTTTGTGTCTTGTATAACTTATATGATCAATCTCAGTAGCTGTTGTTTGTTATATGACAATATATAGAAAGACATGGAAAAAGGTAGTAGTTCTGAAAAGATTTAGAATATAGAATTTATATTTTTTGTAGTTTTCCTTCTGTGGCC AAGTCAGCACTGTTTTAATTTCAAATTTTTCACTGAGCAGGTTTCCTGAAAGTCGAGACGATCTTGGAGCAAAAATTAGAAGAGATGCCCACAATGAAGAGGTTATTCTCAGCGGTCTGTTTATGGATCTTGTTTCTGATTGCCACAATTGTCTTGATTCTGAACAAATTAAATGATAGTGGTGTCTCGTCCGAACTAAAGGTTGTCGATGAAGTGAGTTACTGTTTCTTCACTCTCCGTGAAATCAAATTGGGGAAGAATCCTACGACGGTGACTCACAGAGTATACTTTGATATCGAAATCGGCGGAAAGCCCTCTGGACGAGTTGTCATTGGCCTATTTGGAGAAACAGTCCCTAAAACCGCAGAGAATTTTCGCGCTCTTTGCACGGGAGAGAAAGGAATGGGGAGGAGCGGGAAGCCTCTACATTACAAAGGAAGCAAGTTCCATAGGATCATTCCCAGTTTTATGATACAGGGAGGTGATTTTACTCGTGGAGATGGCCGAGGTGGAGAGTCAATATATGGCGAAAAGTTTGCAGATGAAAATTTCCAATTGAAACATGATGGTCCAGGTTTTGTGTCGATGGCAAACTCTGGGGAGGACACAAACGGATCGCAGTTCTTTATTACGACTGTTAAAACTAGCTGGTTGGATGGGCACCATGTTGTGTTTGGAAAAGTGCTTTCGGGCATGGATGTTGTGTTCAAGATGGAAGCCGAAGGAAGTCAGGGGGATGGAAAACCAAAGACTGAAGTTTACATTTCAGAAAGTGGAGAACTTCCAGTCTATTTTCCTTCTGTGGCC ATGCCCACAATGAAGAGGTTATTCTCAGCGGTCTGTTTATGGATCTTGTTTCTGATTGCCACAATTGTCTTGATTCTGAACAAATTAAATGATAGTGGTGTCTCGTCCGAACTAAAGGTTGTCGATGAAGTGAGTTACTGTTTCTTCACTCTCCGTGAAATCAAATTGGGGAAGAATCCTACGACGGTGACTCACAGAGTATACTTTGATATCGAAATCGGCGGAAAGCCCTCTGGACGAGTTGTCATTGGCCTATTTGGAGAAACAGTCCCTAAAACCGCAGAGAATTTTCGCGCTCTTTGCACGGGAGAGAAAGGAATGGGGAGGAGCGGGAAGCCTCTACATTACAAAGGAAGCAAGTTCCATAGGATCATTCCCAGTTTTATGATACAGGGAGGTGATTTTACTCGTGGAGATGGCCGAGGTGGAGAGTCAATATATGGCGAAAAGTTTGCAGATGAAAATTTCCAATTGAAACATGATGGTCCAGGTTTTGTGTCGATGGCAAACTCTGGGGAGGACACAAACGGATCGCAGTTCTTTATTACGACTGTTAAAACTAGCTGGTTGGATGGGCACCATGTTGTGTTTGGAAAAGTGCTTTCGGGCATGGATGTTGTGTTCAAGATGGAAGCCGAAGGAAGTCAGGGGGATGGAAAACCAAAGACTGAAGTTTACATTTCAGAAAGTGGAGAACTTCCAGTCTATTTTCCTTCTGTGGCC MPTMKRLFSAVCLWILFLIATIVLILNKLNDSGVSSELKVVDEVSYCFFTLREIKLGKNPTTVTHRVYFDIEIGGKPSGRVVIGLFGETVPKTAENFRALCTGEKGMGRSGKPLHYKGSKFHRIIPSFMIQGGDFTRGDGRGGESIYGEKFADENFQLKHDGPGFVSMANSGEDTNGSQFFITTVKTSWLDGHHVVFGKVLSGMDVVFKMEAEGSQGDGKPKTEVYISESGELPVYFPSVA Homology
BLAST of Carg00221 vs. NCBI nr
Match: KAG7031564.1 (Peptidyl-prolyl cis-trans isomerase CYP19-4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 492.3 bits (1266), Expect = 2.4e-135 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of Carg00221 vs. NCBI nr
Match: KAG6600928.1 (Peptidyl-prolyl cis-trans isomerase CYP21-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 451.4 bits (1160), Expect = 4.8e-123 Identity = 225/235 (95.74%), Postives = 226/235 (96.17%), Query Frame = 0
BLAST of Carg00221 vs. NCBI nr
Match: XP_022956858.1 (peptidyl-prolyl cis-trans isomerase CYP19-4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 449.1 bits (1154), Expect = 2.4e-122 Identity = 224/235 (95.32%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of Carg00221 vs. NCBI nr
Match: XP_023534563.1 (peptidyl-prolyl cis-trans isomerase CYP19-4-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 446.8 bits (1148), Expect = 1.2e-121 Identity = 222/235 (94.47%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of Carg00221 vs. NCBI nr
Match: XP_022976921.1 (peptidyl-prolyl cis-trans isomerase CYP19-4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 442.2 bits (1136), Expect = 2.9e-120 Identity = 220/235 (93.62%), Postives = 224/235 (95.32%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy Swiss-Prot
Match: Q8LDP4 (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana OX=3702 GN=CYP19-4 PE=1 SV=2) HSP 1 Score: 300.4 bits (768), Expect = 1.8e-80 Identity = 142/190 (74.74%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy Swiss-Prot
Match: Q8L8W5 (Peptidyl-prolyl cis-trans isomerase CYP21-2 OS=Arabidopsis thaliana OX=3702 GN=CYP21-2 PE=2 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 2.6e-79 Identity = 151/232 (65.09%), Postives = 178/232 (76.72%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy Swiss-Prot
Match: Q9SP02 (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana OX=3702 GN=CYP20-1 PE=1 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 4.8e-78 Identity = 135/181 (74.59%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy Swiss-Prot
Match: Q9TW32 (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum OX=44689 GN=cypB PE=1 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.1e-69 Identity = 125/177 (70.62%), Postives = 147/177 (83.05%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy Swiss-Prot
Match: P52015 (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans OX=6239 GN=cyn-7 PE=1 SV=2) HSP 1 Score: 256.9 bits (655), Expect = 2.3e-67 Identity = 118/168 (70.24%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy TrEMBL
Match: A0A6J1GYE3 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111458426 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 224/235 (95.32%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy TrEMBL
Match: A0A6J1II81 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111477145 PE=3 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.4e-120 Identity = 220/235 (93.62%), Postives = 224/235 (95.32%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy TrEMBL
Match: A0A6J1H098 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111458426 PE=3 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.3e-120 Identity = 220/235 (93.62%), Postives = 221/235 (94.04%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy TrEMBL
Match: A0A6J1IQ17 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111477145 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 6.5e-118 Identity = 216/235 (91.91%), Postives = 220/235 (93.62%), Query Frame = 0
BLAST of Carg00221 vs. ExPASy TrEMBL
Match: A0A0A0KP40 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_5G202380 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.7e-108 Identity = 198/235 (84.26%), Postives = 210/235 (89.36%), Query Frame = 0
BLAST of Carg00221 vs. TAIR 10
Match: AT2G29960.1 (cyclophilin 5 ) HSP 1 Score: 300.4 bits (768), Expect = 1.3e-81 Identity = 142/190 (74.74%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of Carg00221 vs. TAIR 10
Match: AT3G55920.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 296.6 bits (758), Expect = 1.8e-80 Identity = 151/232 (65.09%), Postives = 178/232 (76.72%), Query Frame = 0
BLAST of Carg00221 vs. TAIR 10
Match: AT5G58710.1 (rotamase CYP 7 ) HSP 1 Score: 292.4 bits (747), Expect = 3.4e-79 Identity = 135/181 (74.59%), Postives = 161/181 (88.95%), Query Frame = 0
BLAST of Carg00221 vs. TAIR 10
Match: AT2G29960.2 (cyclophilin 5 ) HSP 1 Score: 277.3 bits (708), Expect = 1.1e-74 Identity = 134/190 (70.53%), Postives = 156/190 (82.11%), Query Frame = 0
BLAST of Carg00221 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 241.5 bits (615), Expect = 7.0e-64 Identity = 111/168 (66.07%), Postives = 137/168 (81.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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