Carg00185 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCCCGTTTCTCGATTCATATTCGTCCATGGCGGATCATTTGGCCAGAGCAGAGGATTTCGATTCCAAAGCAGAAAAGAAGCTCAGTGGTTGGGGATTGTTCGGCTCCAAGTACGATGATGCTGCAGATCTCTTCGATAAAGCCGCCAATTCTTACAAGCTTTCGAAATCATGTATTGCTAATCGCTTTTCACCTTATGATTCTTCTTTTTATTTCTCTCTGTTCGATCATTACTTTCCCTGTTTTGTTAATTTCATTATCCCTAAACGCTGCTGCGTATGAGAAGGACGGTCTTACGGAAGGATTTTTGTTGTTTCATTGTTTTTATCATTTTGATGCGTAATTTAATTGTGGCGGGCTACTTGTGTTCTGTTTCTTTTTGCTTCTTTTATGATATCGTTTTTCCCGTTTTCTGGCGGTTTTTTTGGGGTTATGCGAGAGTTTTTGCTTAGAAATCAAGAGCACCATGGTTTCATCTTTTGATTGATCGGCATTGTTGCATGCTTGGTAGGGGCGGAGCCAAAAATTTTCATGATGAGGAGAAAAGTTTTACATTCTTATGTATAATCTTTGGAGTTCTAAGAAGTTAGGAGGTAAAATAGAAGAGGAAAAGAAAACTTGTGAGATCTCACGTTGGTTCGAGAGGGAATGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAGAGGCATTTTAGAACCGTGAGGCTGACGACACGACGTAACAGGCCAAAGCGGACAATATCTATTAGCAGTGGGCTTGGATTGTTACAAAACTAATAGAGGGATTGCCCCCCTCTTCGTTCTGCCCCGATGAGTTGTGGCCGTTGTCTTAATTGGCCAATCTTTATAACATTTTCCATGCTTTGCGTGTCTGAATTTTACATTATTGTCTATTTCAGTTTCCTGCCATCCATTTCCTTTCTAATCTCTGTGGATGTGGTTTTTCCAGGGGATAAAGCAGGATCAACATATATAAAGTTAGCAAATTGTCATCTGAAGGTTGGTGCTTCGTGTTTGTGAGATCGATGGCTTCGTCTTCCTTTGTTGTACACTGTTTCTTTTACTGAACAATGCATTGTTTTTCTTATAAAGATGGAAAGCAAACATGAAGCAGCTCAAGCTTATATTGATGCGGGCAATTGCTATAAGAAAACATCTGTTAGAGGTAATACTGGTTCATAATTGATCATTCTATACTTTAACGCGAACTGTAAGAGTGAAACAATTCTAGTTCAATTACGACGTTATTGTTGGTTAAATTACTTATTTCCAATTGTTATCTTGATGCAGAGGCCATATCTTGCATAGAGCAGGCAGTGAATTTGTTTTGTGACATTGGAAGACTCAATATGGCTGCAAGATATTACAAGGTTCATTGTTATTCTGCTACGTGAAATGCTTATTATTTGATTTCTTTGATCGTCTTAAATGTTCGGCTACTTCACGAGGTTATGCTGTGAATTGTTTTTTTCTTTTCGTTTGGAACCTATTCTTGTGGCTGCTAATTCTTGATTAGACACTATGAAGTATCATACATTATGTAACATCCCAAGCTCATCGCTAGCAGATATTGTCCTCGTTGGACTTTCCCTTTCGAGCTTTTCCTCAAGGCTTTTAAAATGCGTCAGCTAGGGGTGGGCTTGGGATGTTACAAATGGTATCAAAGCCAGACATCCGGGCGGTATACCAGCATGAATGCTGAGCCCTGAAGGAGGGTGGATTGTGAGATACCCCATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGGTATGGAAACCTCTCCCTAGTAAACGCGTTTTAAAACCGTGAGGTTGACGGCGATACGTAATGTGCAAAAACAGATAATATCTGCCAGCAGTGGGCTTGAGCTATTACACATCAAGTCTCTCTAGACAGCAGTTGCCTTGTCATGGAAATTTCTTATGCAGAATTCTTTCATCATTTGATTGACAGAGAGTTAAACAAATGCCTCATATGCAATCCATGACTTGGATTTACCTTCTCGTGTGTGCAGGAAATTGCTGAATTGTTCGAGTCCGAACAGGATATCGAGCAAGCAATCGATTACTTTGAAAAAGCTGCTGACCTTTTCCAAAATGAAGAAGTGACAACTTCAGCAAATCAATGCAAGCAGAAAGTTGCACAATTTGCTGCACAGTTGGAACAGTAAGATAGTGTAGTATTGATAAATTGTGCTGCATCCTTATGATTGACACATTTAAAACATTACCAAGCTTTCTTCTACTTTGATGGTTTCATACTATCCATTTATTTTGATATTGTACAAACAGTTATCTTATGAAGACATCTTTGATATGGTAACATAATTTGTAGGTATCAGAAAGCAATCGATATCTACGAAGAGATAGCGAAGTATTCTCTGAAGAGTAACTTGCTCAAGTATGGAGTGAAAGGGCATCTTCTTAATGCTGGAATTTGCCAGCTTTGCAAAGGCGATATCGTTGCTATTACCAAAGCATTGGATAACTATCAGGTAGTTATCGGACATGACTGTCTCATCTCGTCCTCGTGATTTCTGTCCTGACCATATTACATCCCTTCTGCAGGACCTAGATCCTACATTCTCAGGGTCACGTGAATATAAGCTTTTAGCGGTGCGTTACGTTCGCCTCTGAATTCTGATTTATTATTCTTTCTTTTGCATATTTAATGTTTTTTCATATATGTTGAACAAGAAGTTTGATGGTTCTACTCATTTCTTGTCCGGCTTGCTCATTGATTGAAGGCATTGTCATATATTGCATGAAATTGAAGTGCTTCTTGACTAGAAAACCTCTTATATTTGTTCGTTTATCCGTCTGATATTTTTACCTCAGGACATTGCATCTGCCATTGATGAGGAAGATGTAGCAAAATTTACTGATGTTGTCAAGGAATTTGATAGCATGACCACACTGGTAAGATCATACTTTATGAGTCGACTTGAATACAATGTTATTGATGTGTAATCTGCGAAGTTACTTCCTGAAAATCTTACGTTCGATCTAGAGAATGTTCGTTGTCCAACTCGGAATCACCTGAAAATAACACAAAAACACACACAAAACAGAGGGAAACAAATACCAAATTATGTTATATTGATAGTTCTTCAATATACAGCACAATCACACCCCATGCTGAAATCCCAACCCCCCACACACGAACACCTCATGACGGTACACGCATGTTCCTCCTGCCCCCGTAACTTTCTACCTACCGTGAAATAACATTCTTACCGTTCCTAGAGTACGTATGCGCGATTGGAGTCTTCACACAAGCGCAGTTTGATCGTTTGAAATAACTTTGTTGTTTTCATTTGTAATGGTAAAGACTAATGTGCACAAACTATTGACAGGATCCATTGAAGACGACCCTTCTTTTAAGGGTGAAGGACAAGCTGAAAGCCAAAGAGCTGGAAGAGGATGATCTTACCTAAAGAGGATGATTTTTTTTTTTTTTAGATTATTTCTATGGCTGTGTGCGCGTGTGTGTGTTCTATGTCCAGATGTTTTGGCAATCGACTGTCTGTTCATTATTGAATGACTTGGTGTTTGGGTTTGGGTTTGGATTTTGATGAATAAAGTCTCATCCTCTAAGCTGTGAGCTTCTGAGTGTTGTTCTCATTTTGGAAACCAAATCTCTACAAAAAATTATGTCCAAATATATAAAGCTTTTATTATTCAAA CTCCCGTTTCTCGATTCATATTCGTCCATGGCGGATCATTTGGCCAGAGCAGAGGATTTCGATTCCAAAGCAGAAAAGAAGCTCAGTGGTTGGGGATTGTTCGGCTCCAAGTACGATGATGCTGCAGATCTCTTCGATAAAGCCGCCAATTCTTACAAGCTTTCGAAATCATGGGATAAAGCAGGATCAACATATATAAAGTTAGCAAATTGTCATCTGAAGATGGAAAGCAAACATGAAGCAGCTCAAGCTTATATTGATGCGGGCAATTGCTATAAGAAAACATCTGTTAGAGAGGCCATATCTTGCATAGAGCAGGCAGTGAATTTGTTTTGTGACATTGGAAGACTCAATATGGCTGCAAGATATTACAAGGAAATTGCTGAATTGTTCGAGTCCGAACAGGATATCGAGCAAGCAATCGATTACTTTGAAAAAGCTGCTGACCTTTTCCAAAATGAAGAAGTGACAACTTCAGCAAATCAATGCAAGCAGAAAGTTGCACAATTTGCTGCACAGTTGGAACAGTATCAGAAAGCAATCGATATCTACGAAGAGATAGCGAAGTATTCTCTGAAGAGTAACTTGCTCAAGTATGGAGTGAAAGGGCATCTTCTTAATGCTGGAATTTGCCAGCTTTGCAAAGGCGATATCGTTGCTATTACCAAAGCATTGGATAACTATCAGGACCTAGATCCTACATTCTCAGGGTCACGTGAATATAAGCTTTTAGCGGACATTGCATCTGCCATTGATGAGGAAGATGTAGCAAAATTTACTGATGTTGTCAAGGAATTTGATAGCATGACCACACTGGATCCATTGAAGACGACCCTTCTTTTAAGGGTGAAGGACAAGCTGAAAGCCAAAGAGCTGGAAGAGGATGATCTTACCTAAAGAGGATGATTTTTTTTTTTTTTAGATTATTTCTATGGCTGTGTGCGCGTGTGTGTGTTCTATGTCCAGATGTTTTGGCAATCGACTGTCTGTTCATTATTGAATGACTTGGTGTTTGGGTTTGGGTTTGGATTTTGATGAATAAAGTCTCATCCTCTAAGCTGTGAGCTTCTGAGTGTTGTTCTCATTTTGGAAACCAAATCTCTACAAAAAATTATGTCCAAATATATAAAGCTTTTATTATTCAAA ATGGCGGATCATTTGGCCAGAGCAGAGGATTTCGATTCCAAAGCAGAAAAGAAGCTCAGTGGTTGGGGATTGTTCGGCTCCAAGTACGATGATGCTGCAGATCTCTTCGATAAAGCCGCCAATTCTTACAAGCTTTCGAAATCATGGGATAAAGCAGGATCAACATATATAAAGTTAGCAAATTGTCATCTGAAGATGGAAAGCAAACATGAAGCAGCTCAAGCTTATATTGATGCGGGCAATTGCTATAAGAAAACATCTGTTAGAGAGGCCATATCTTGCATAGAGCAGGCAGTGAATTTGTTTTGTGACATTGGAAGACTCAATATGGCTGCAAGATATTACAAGGAAATTGCTGAATTGTTCGAGTCCGAACAGGATATCGAGCAAGCAATCGATTACTTTGAAAAAGCTGCTGACCTTTTCCAAAATGAAGAAGTGACAACTTCAGCAAATCAATGCAAGCAGAAAGTTGCACAATTTGCTGCACAGTTGGAACAGTATCAGAAAGCAATCGATATCTACGAAGAGATAGCGAAGTATTCTCTGAAGAGTAACTTGCTCAAGTATGGAGTGAAAGGGCATCTTCTTAATGCTGGAATTTGCCAGCTTTGCAAAGGCGATATCGTTGCTATTACCAAAGCATTGGATAACTATCAGGACCTAGATCCTACATTCTCAGGGTCACGTGAATATAAGCTTTTAGCGGACATTGCATCTGCCATTGATGAGGAAGATGTAGCAAAATTTACTGATGTTGTCAAGGAATTTGATAGCATGACCACACTGGATCCATTGAAGACGACCCTTCTTTTAAGGGTGAAGGACAAGCTGAAAGCCAAAGAGCTGGAAGAGGATGATCTTACCTAA MADHLARAEDFDSKAEKKLSGWGLFGSKYDDAADLFDKAANSYKLSKSWDKAGSTYIKLANCHLKMESKHEAAQAYIDAGNCYKKTSVREAISCIEQAVNLFCDIGRLNMAARYYKEIAELFESEQDIEQAIDYFEKAADLFQNEEVTTSANQCKQKVAQFAAQLEQYQKAIDIYEEIAKYSLKSNLLKYGVKGHLLNAGICQLCKGDIVAITKALDNYQDLDPTFSGSREYKLLADIASAIDEEDVAKFTDVVKEFDSMTTLDPLKTTLLLRVKDKLKAKELEEDDLT Homology
BLAST of Carg00185 vs. NCBI nr
Match: XP_022956354.1 (alpha-soluble NSF attachment protein 2-like [Cucurbita moschata] >XP_023536437.1 alpha-soluble NSF attachment protein 2-like [Cucurbita pepo subsp. pepo] >KAG6600896.1 hypothetical protein SDJN03_06129, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031530.1 hypothetical protein SDJN02_05570 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 563.1 bits (1450), Expect = 1.3e-156 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of Carg00185 vs. NCBI nr
Match: XP_022991930.1 (alpha-soluble NSF attachment protein 2-like [Cucurbita maxima]) HSP 1 Score: 562.0 bits (1447), Expect = 3.0e-156 Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of Carg00185 vs. NCBI nr
Match: XP_038893428.1 (alpha-soluble NSF attachment protein 2-like [Benincasa hispida]) HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154 Identity = 283/289 (97.92%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of Carg00185 vs. NCBI nr
Match: XP_022146873.1 (alpha-soluble NSF attachment protein 2-like [Momordica charantia]) HSP 1 Score: 548.5 bits (1412), Expect = 3.4e-152 Identity = 276/289 (95.50%), Postives = 288/289 (99.65%), Query Frame = 0
BLAST of Carg00185 vs. NCBI nr
Match: KAF3964963.1 (hypothetical protein CMV_010801 [Castanea mollissima]) HSP 1 Score: 493.4 bits (1269), Expect = 1.3e-135 Identity = 245/289 (84.78%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy Swiss-Prot
Match: Q9SPE6 (Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana OX=3702 GN=ASNAP2 PE=1 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 3.1e-124 Identity = 218/289 (75.43%), Postives = 254/289 (87.89%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy Swiss-Prot
Match: P93798 (Alpha-soluble NSF attachment protein OS=Vitis vinifera OX=29760 PE=2 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 1.9e-121 Identity = 216/289 (74.74%), Postives = 251/289 (86.85%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy Swiss-Prot
Match: Q9M5P8 (Alpha-soluble NSF attachment protein OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-113 Identity = 202/289 (69.90%), Postives = 248/289 (85.81%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy Swiss-Prot
Match: Q9LXZ5 (Alpha-soluble NSF attachment protein 1 OS=Arabidopsis thaliana OX=3702 GN=ASNAP1 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.2e-61 Identity = 135/253 (53.36%), Postives = 166/253 (65.61%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy Swiss-Prot
Match: Q54NP6 (Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum OX=44689 GN=snpA PE=1 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.2e-60 Identity = 122/279 (43.73%), Postives = 187/279 (67.03%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy TrEMBL
Match: A0A6J1GYT0 (alpha-soluble NSF attachment protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458118 PE=3 SV=1) HSP 1 Score: 563.1 bits (1450), Expect = 6.5e-157 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy TrEMBL
Match: A0A6J1JUA6 (alpha-soluble NSF attachment protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488422 PE=3 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 1.4e-156 Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy TrEMBL
Match: A0A6J1CZQ2 (alpha-soluble NSF attachment protein 2-like OS=Momordica charantia OX=3673 GN=LOC111015967 PE=3 SV=1) HSP 1 Score: 548.5 bits (1412), Expect = 1.7e-152 Identity = 276/289 (95.50%), Postives = 288/289 (99.65%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy TrEMBL
Match: A0A6J1HIF0 (alpha-soluble NSF attachment protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464692 PE=3 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135 Identity = 249/289 (86.16%), Postives = 271/289 (93.77%), Query Frame = 0
BLAST of Carg00185 vs. ExPASy TrEMBL
Match: A0A6J1JTZ3 (alpha-soluble NSF attachment protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488888 PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135 Identity = 249/289 (86.16%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of Carg00185 vs. TAIR 10
Match: AT3G56190.1 (alpha-soluble NSF attachment protein 2 ) HSP 1 Score: 446.0 bits (1146), Expect = 2.2e-125 Identity = 218/289 (75.43%), Postives = 254/289 (87.89%), Query Frame = 0
BLAST of Carg00185 vs. TAIR 10
Match: AT3G56190.2 (alpha-soluble NSF attachment protein 2 ) HSP 1 Score: 341.7 bits (875), Expect = 5.9e-94 Identity = 174/239 (72.80%), Postives = 204/239 (85.36%), Query Frame = 0
BLAST of Carg00185 vs. TAIR 10
Match: AT3G56450.1 (alpha-soluble NSF attachment protein 1 ) HSP 1 Score: 237.3 bits (604), Expect = 1.6e-62 Identity = 135/253 (53.36%), Postives = 166/253 (65.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|