Carg00178 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00178
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic
Location	Carg_Chr04: 5759858 .. 5762618 (+)
RNA-Seq Expression	Carg00178
Synteny	Carg00178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATATCCCACTACGGCTAAACGGTAAGAAAAGGGGTGCGGCGTGGAGAACGGATTGCCTGGTGGATTCGTTACGCTCTACGAGCCCTTCTTCTTCGCGAAATTAAAGGGCAAAACCCAAAAATCTAAGTAGCTTTTTAGCGTCACCCTCTACGGCTATCGCCCCCTTCGTTGTACACTAATGGACTGCAGCTGTAGCAATTTCAGAACCTCCACTGCTCCTCTATCTTGGACACCCACTTCCTCTTCTCGCTTCAAATTTCGGGTACCCTTTTTCCTCTTCTTTCCCCCCATTTCGTTACTTCTTTGATGGTGGATTCTTCTCATTTTTACAGAATTTTAAGCGTTTTAACTTCAATAAACATTCTATGGTGGCGATGAGCGTTTCTGAGTCCGGCGAAAATGGCTCTCTCCATAGGTTTCCCTTTACTCCCAACAAGCTTTTTATGCAGGAGGTACTAAATTTAACATTCTTTTCGTAGTTAAACCGATTAACCTTTGTAATTTGATGCTCTTAACTGATGGGGTTTGCATATCTTTCAATGTTTCAAGTTTGTGATCAATGTTTGTGTGTCAGGCAATCGGAGCTGAATATGGAGAAGGATTTGAGAGTTTTAGTCCAGATGGTCTTATGAAAGTGGACGTGGTAAGGAAAAAATGGTGTAAATATAATTATATTCAAGCTATTTCTCTTCTGCTTTTTTCAAATCCTTGTGGCAACCAGGACTTCTTGAACGATAGACTGCAAGAAGGATTTCTTAAAAGAATTCGTTATGCTATGAAACCAGATGAAGCATACGGCTTAGTTTTCTCTTGGGATAATGTTGTGGTAACTTCTATGTTCTTAATACCCATATAACCAAATGTCCTGATTATGAACATGTTTTTGTCTGATGATGTGTATAATTCATTTTCAGGCAGATACTCAAACTTTAAAGTTAAATTCATGGAAGCAACTTGCCTCAGAAGAAGGTTTTGTTCTATTTCTTTGGAAATTACTGCACCGATGCATATATGAAATCTTTTATTTAGAATTTTCATAATCTCTTACTGAATTAAGAAATCTTTTAATCTCTGTTTTATTGTTTTGAATTTTGAATTGTAATTGCTATAGGAAAAAGAGTTCCTGAAGATGGTGATATGCAGAAGCTTATGCTTTATGGAGGTGCAGATCATGTATTGCAGAAGGTTTGTAATTTTTTTTTTTCCCTTTTCCATTAGAGATATTATATATGTTTTAAGAAAGGTTGTCGGGTTTATTACCGAGGTTGAAAATTGAAATATGCTTCTCGTTGTACTTGCATACGAAAATATGTTTCTTATGGAGATGTAACTCGTGTTCTATGATGTTATCTTGGTACAAAAGGCGCTCCAATTTTCCGTCGAATATATGTTCTATGTCATGGTTAGGATTAAGAAGGTTTGGATACTTCTAACCTATACGTTTGCCTTATTATCAAAAGCTCTGTGGTTTCTTTCTATCAGAGCTAGACACCGGATGGTATGCCATTGAGGACGCCGAGCCCCAAAGGGGGTGGACACCGGGCGGTGTGCCAACGAGGATGTTGGGCTCTAAAAGGGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGAAACGAGTGCTAGTAAGGACGTTGGGTCCCGAAGGGGGATGGATTGTGAGATCCCTCGTCGGTTGGAGAGGGGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTGAAAACCTTGAGGAAAGCCCAAAGAGGACAATATCTGCTTGTGGTGTTTTTTTTTAATGCTTTTGAAAACTCTGCTCAACCTTTCAGCTTCTACGTTGGGGCATGGCAGAAAGCGAGCTGGATAGATTGAAATCGAGGTTTTCACAGTTGTATTATAGAGGTCTTCTTTCTGTGAGTACTCTCAATAAAATCTTTTTATAGACTGTTTTGTTCGTTCGATTGTTCGTGTAAATCATTTAAATACTTTCTTATTCAGCTTAAAACGCCAGTTGATGGTCTCAAAGAGTGGCTGGATGCCGTGTCTACAGCTCACATTCCCTGTGCCATCGTTTCAAGTCTCGATCGGAAACACATGCTCGAAGCATTAGATCGAATGAGTTTGAAGAAATATTTTCAGGTAACCTTCTCTTGCATTCAAAGTTAGAACTAGAAGACTGAGTAACTTTATTCTAAGCCAAATAGTAAAACGAATACACCGTTATCATTTTTGTAGGCAGTCGTAACGGAGGAAGATGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTCGCATATTGTTAAACTCGAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCAGCTCACAATTGTACGATGATGGCTATAGCATTGATCGGTGCGCACCCCGCGTATGTGCCTCACATCCTTACTTCTTAACGAATATCTCGATCATCAACTGATATAGAAACGATATGGTGCAGATATGATCTAGTACAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCGGTAATCAACTTACGGAGATTATTCGCTAACAAGGGTTCAACGTTCATGGAATTGCAGAAGCAGAACGTCAAGAAAGCTCCATCGAAGAGAAAGCTTACGATCGACACGATATTCTGA

mRNA sequence

CAAAATATCCCACTACGGCTAAACGGTAAGAAAAGGGGTGCGGCGTGGAGAACGGATTGCCTGGTGGATTCGTTACGCTCTACGAGCCCTTCTTCTTCGCGAAATTAAAGGGCAAAACCCAAAAATCTAAGTAGCTTTTTAGCGTCACCCTCTACGGCTATCGCCCCCTTCGTTGTACACTAATGGACTGCAGCTGTAGCAATTTCAGAACCTCCACTGCTCCTCTATCTTGGACACCCACTTCCTCTTCTCGCTTCAAATTTCGGAATTTTAAGCGTTTTAACTTCAATAAACATTCTATGGTGGCGATGAGCGTTTCTGAGTCCGGCGAAAATGGCTCTCTCCATAGGTTTCCCTTTACTCCCAACAAGCTTTTTATGCAGGAGGCAATCGGAGCTGAATATGGAGAAGGATTTGAGAGTTTTAGTCCAGATGGTCTTATGAAAGTGGACGTGGTAAGGAAAAAATGGTGTAAATATAATTATATTCAAGCTATTTCTCTTCTGCTTTTTTCAAATCCTTGTGGCAACCAGGACTTCTTGAACGATAGACTGCAAGAAGGATTTCTTAAAAGAATTCGTTATGCTATGAAACCAGATGAAGCATACGGCTTAGTTTTCTCTTGGGATAATGTTGTGGCAGATACTCAAACTTTAAAGTTAAATTCATGGAAGCAACTTGCCTCAGAAGAAGGAAAAAGAGTTCCTGAAGATGGTGATATGCAGAAGCTTATGCTTTATGGAGGTGCAGATCATGTATTGCAGAAGCTTAAAACGCCAGTTGATGGTCTCAAAGAGTGGCTGGATGCCGTGTCTACAGCTCACATTCCCTGTGCCATCGTTTCAAGTCTCGATCGGAAACACATGCTCGAAGCATTAGATCGAATGAGTTTGAAGAAATATTTTCAGGCAGTCGTAACGGAGGAAGATGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTCGCATATTGTTAAACTCGAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCAGCTCACAATTGTACGATGATGGCTATAGCATTGATCGGTGCGCACCCCGCATATGATCTAGTACAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCGGTAATCAACTTACGGAGATTATTCGCTAACAAGGGTTCAACGTTCATGGAATTGCAGAAGCAGAACGTCAAGAAAGCTCCATCGAAGAGAAAGCTTACGATCGACACGATATTCTGA

Coding sequence (CDS)

ATGGACTGCAGCTGTAGCAATTTCAGAACCTCCACTGCTCCTCTATCTTGGACACCCACTTCCTCTTCTCGCTTCAAATTTCGGAATTTTAAGCGTTTTAACTTCAATAAACATTCTATGGTGGCGATGAGCGTTTCTGAGTCCGGCGAAAATGGCTCTCTCCATAGGTTTCCCTTTACTCCCAACAAGCTTTTTATGCAGGAGGCAATCGGAGCTGAATATGGAGAAGGATTTGAGAGTTTTAGTCCAGATGGTCTTATGAAAGTGGACGTGGTAAGGAAAAAATGGTGTAAATATAATTATATTCAAGCTATTTCTCTTCTGCTTTTTTCAAATCCTTGTGGCAACCAGGACTTCTTGAACGATAGACTGCAAGAAGGATTTCTTAAAAGAATTCGTTATGCTATGAAACCAGATGAAGCATACGGCTTAGTTTTCTCTTGGGATAATGTTGTGGCAGATACTCAAACTTTAAAGTTAAATTCATGGAAGCAACTTGCCTCAGAAGAAGGAAAAAGAGTTCCTGAAGATGGTGATATGCAGAAGCTTATGCTTTATGGAGGTGCAGATCATGTATTGCAGAAGCTTAAAACGCCAGTTGATGGTCTCAAAGAGTGGCTGGATGCCGTGTCTACAGCTCACATTCCCTGTGCCATCGTTTCAAGTCTCGATCGGAAACACATGCTCGAAGCATTAGATCGAATGAGTTTGAAGAAATATTTTCAGGCAGTCGTAACGGAGGAAGATGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTCGCATATTGTTAAACTCGAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCGAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCAGCTCACAATTGTACGATGATGGCTATAGCATTGATCGGTGCGCACCCCGCATATGATCTAGTACAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCGGTAATCAACTTACGGAGATTATTCGCTAACAAGGGTTCAACGTTCATGGAATTGCAGAAGCAGAACGTCAAGAAAGCTCCATCGAAGAGAAAGCTTACGATCGACACGATATTCTGA

Protein sequence

MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDMQKLMLYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF

Homology

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: KAG7031523.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 801.2 bits (2068), Expect = 4.0e-228
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKY 240
           QKLMLYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKY
Sbjct: 181 QKLMLYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKY 240

Query: 241 FQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQ 300
           FQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQ
Sbjct: 241 FQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQ 300

Query: 301 LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRR 360
           LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRR
Sbjct: 301 LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRR 360

Query: 361 LFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           LFANKGSTFMELQKQNVKKAPSKRKLTIDTIF
Sbjct: 361 LFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 392

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: KAG6600888.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 613.6 bits (1581), Expect = 1.2e-171
Identity = 328/420 (78.10%), Postives = 328/420 (78.10%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDGLMKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGLMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLYGGADHVLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYGGADHVLQKLLRWGMAESELDRLKSRFSQLYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF
Sbjct: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_023544709.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609.8 bits (1571), Expect = 1.7e-170
Identity = 326/420 (77.62%), Postives = 327/420 (77.86%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDGLMKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGLMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GADHVLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADHVLQKLLRWGMAESELDRMKSRFSQLYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNV+KAPSKRKLTIDTIF
Sbjct: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVEKAPSKRKLTIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_022941691.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 592.4 bits (1526), Expect = 2.8e-165
Identity = 317/420 (75.48%), Postives = 323/420 (76.90%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFK+R+FKRFNFNKHSMVAM VSESGENGSL+RFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKYRSFKRFNFNKHSMVAMRVSESGENGSLNRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGF SF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFVSFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFL+RIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLQRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GADHVLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADHVLQKLLRWGMAESELDRLQSRFSQLYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDRKHMLEALDRMSLKKYFQA+VTEEDGMESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRKHMLEALDRMSLKKYFQAIVTEEDGMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNV+KAP KRKLTIDTIF
Sbjct: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVEKAPLKRKLTIDTIF 358

[Close]

BLAST of Carg00178 vs. NCBI nr
Match: XP_022941854.1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 559.3 bits (1440), Expect = 2.6e-155
Identity = 302/420 (71.90%), Postives = 311/420 (74.05%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDC+CSNFRTSTAP SWTPTS+S+ KFRN KR N  KHSMVAMSVS SGENGSL RFP T
Sbjct: 1   MDCTCSNFRTSTAPFSWTPTSTSKLKFRNLKRLNSIKHSMVAMSVSGSGENGSLARFPLT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRY+MKPDEAYGLVFSWDNVVADTQTLKLN+WKQLASEEGKRVPEDGD+
Sbjct: 121 NDRLQEGFLKRIRYSMKPDEAYGLVFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDGDV 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GAD VLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADQVLQKLLLWGMAESELDRLKLRFSELYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDR HMLEALDRMSLKKYFQA+VTEED MESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRIHMLEALDRMSLKKYFQAIVTEEDDMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAV SFNELSVINLRRLFANKGSTFMELQKQ+ +KAPSKRKL IDTIF
Sbjct: 361 GAHPAYDLVQADLAVGSFNELSVINLRRLFANKGSTFMELQKQSAEKAPSKRKLRIDTIF 358

[Close]

BLAST of Carg00178 vs. ExPASy Swiss-Prot
Match: Q9LDD5 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYRP2 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-15
Identity = 70/272 (25.74%), Postives = 118/272 (43.38%), Query Frame = 0


Query: 143 GLVFSWDNV-VADTQTLKLNSWKQLASEEGKRVPEDGDMQKL-----------MLYGGAD 202
           G +F W+ V + D   L   SW  LA EEGK  P    ++++           +L    D
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKSPPPAFMLRRVEGMKNEQAISEVLCWSRD 188

Query: 203 HV----LQKLKTPV------------DGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDR 262
            V    + K K  +            DG +E+++ +    IP A+VS+  R+ +  A+  
Sbjct: 189 PVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGS 248

Query: 263 MSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHE 322
           + ++K+F  +V  ED                          Y G      F         
Sbjct: 249 IGIRKFFSVIVASED-------------------------VYRGKPDPEMF--------- 308

Query: 323 CVYLLQ-LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNEL 382
            +Y  Q LD  P +C+VF +  + I AAH+  M  +A+   HP Y+L  A+L V   +EL
Sbjct: 309 -IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVASKHPIYELGAAELVVRRLDEL 365

[Close]

BLAST of Carg00178 vs. ExPASy Swiss-Prot
Match: Q9X0Y1 (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_1254 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-04
Identity = 50/207 (24.15%), Postives = 80/207 (38.65%), Query Frame = 0


Query: 144 LVFSWDNVVADTQTLKLNSWKQLASEEGK-----------RVPEDGDMQKLM-------- 203
           ++F  D V+ DT+ L   +++++A   GK            VPE   +  LM        
Sbjct: 4   VIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDS 63

Query: 204 -------LYGGADHVLQKLKTPVDGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSL 263
                  ++     V  +L     G++E L+ V +  I  A+ +S  ++  LE L R+ L
Sbjct: 64  LENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDL 123

Query: 264 KKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVY 322
           +KYF  +V                                G+Q ++      G     +Y
Sbjct: 124 EKYFDVMVF-------------------------------GDQVKN------GKPDPEIY 173

[Close]

BLAST of Carg00178 vs. ExPASy TrEMBL
Match: A0A6J1FLT2 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446975 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.4e-165
Identity = 317/420 (75.48%), Postives = 323/420 (76.90%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDCSCSNFRTSTAPLSWTPTSSSRFK+R+FKRFNFNKHSMVAM VSESGENGSL+RFPFT
Sbjct: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKYRSFKRFNFNKHSMVAMRVSESGENGSLNRFPFT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGF SF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFVSFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFL+RIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM
Sbjct: 121 NDRLQEGFLQRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GADHVLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADHVLQKLLRWGMAESELDRLQSRFSQLYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDRKHMLEALDRMSLKKYFQA+VTEEDGMESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRKHMLEALDRMSLKKYFQAIVTEEDGMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNV+KAP KRKLTIDTIF
Sbjct: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVEKAPLKRKLTIDTIF 358

[Close]

BLAST of Carg00178 vs. ExPASy TrEMBL
Match: A0A6J1FPN1 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447088 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.3e-155
Identity = 302/420 (71.90%), Postives = 311/420 (74.05%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDC+CSNFRTSTAP SWTPTS+S+ KFRN KR N  KHSMVAMSVS SGENGSL RFP T
Sbjct: 1   MDCTCSNFRTSTAPFSWTPTSTSKLKFRNLKRLNSIKHSMVAMSVSGSGENGSLARFPLT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRY+MKPDEAYGLVFSWDNVVADTQTLKLN+WKQLASEEGKRVPEDGD+
Sbjct: 121 NDRLQEGFLKRIRYSMKPDEAYGLVFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDGDV 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GAD VLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADQVLQKLLLWGMAESELDRLKLRFSELYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDR HMLEALDRMSLKKYFQA+VTEED MESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRIHMLEALDRMSLKKYFQAIVTEEDDMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 358

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAV SFNELSVINLRRLFANKGSTFMELQKQ+ +KAPSKRKL IDTIF
Sbjct: 361 GAHPAYDLVQADLAVGSFNELSVINLRRLFANKGSTFMELQKQSAEKAPSKRKLRIDTIF 358

[Close]

BLAST of Carg00178 vs. ExPASy TrEMBL
Match: A0A6J1K9N2 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491350 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 7.7e-153
Identity = 301/422 (71.33%), Postives = 310/422 (73.46%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTP--TSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFP 60
           MDC+ SNFRTSTAP SWTP  TS+S+ KFRN KR N  KHSMVAMSVS SGENGSL RFP
Sbjct: 1   MDCTYSNFRTSTAPFSWTPTSTSTSKLKFRNLKRLNSIKHSMVAMSVSGSGENGSLARFP 60

Query: 61  FTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQD 120
            TPNKLFMQEAIGAEYGEGFESF PDG MKVDV                          D
Sbjct: 61  LTPNKLFMQEAIGAEYGEGFESFRPDGPMKVDV--------------------------D 120

Query: 121 FLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDG 180
           FLNDRLQEGFLKRIRY+MKPDEAYGLVFSWDNVVADTQTLKLN+WKQLASEEGKRVPEDG
Sbjct: 121 FLNDRLQEGFLKRIRYSMKPDEAYGLVFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDG 180

Query: 181 DMQKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAV 240
           D+QKLMLY GAD VLQK                            LKTPVDGLKEWLDAV
Sbjct: 181 DVQKLMLYAGADQVLQKLLLWGMAESELDRLKLRFSELYYRGLLSLKTPVDGLKEWLDAV 240

Query: 241 STAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSH 300
           STA IPCAIVSSLDR HMLEALDRMSLKKYFQA+VTEED MESMAHRFLSAAVK      
Sbjct: 241 STARIPCAIVSSLDRIHMLEALDRMSLKKYFQAIVTEEDDMESMAHRFLSAAVK------ 300

Query: 301 IVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIA 360
                                         LDRKPSKCVVFEDDPRGITAAHNCTMMAIA
Sbjct: 301 ------------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIA 360

Query: 361 LIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDT 393
           LIGAHPAYDLVQADLAV SFNELSVINLRRLFANKGSTFMELQKQ+ +KAPSKRKL IDT
Sbjct: 361 LIGAHPAYDLVQADLAVGSFNELSVINLRRLFANKGSTFMELQKQSAEKAPSKRKLRIDT 360

[Close]

BLAST of Carg00178 vs. ExPASy TrEMBL
Match: A0A6J1FM90 (5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447088 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 7.7e-153
Identity = 300/420 (71.43%), Postives = 309/420 (73.57%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRFKFRNFKRFNFNKHSMVAMSVSESGENGSLHRFPFT 60
           MDC+CSNFRTSTAP SWTPTS+S+ KFR   R N  KHSMVAMSVS SGENGSL RFP T
Sbjct: 1   MDCTCSNFRTSTAPFSWTPTSTSKLKFR---RLNSIKHSMVAMSVSGSGENGSLARFPLT 60

Query: 61  PNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSNPCGNQDFL 120
           PNKLFMQEAIGAEYGEGFESF PDG MKVDV                          DFL
Sbjct: 61  PNKLFMQEAIGAEYGEGFESFRPDGPMKVDV--------------------------DFL 120

Query: 121 NDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGKRVPEDGDM 180
           NDRLQEGFLKRIRY+MKPDEAYGLVFSWDNVVADTQTLKLN+WKQLASEEGKRVPEDGD+
Sbjct: 121 NDRLQEGFLKRIRYSMKPDEAYGLVFSWDNVVADTQTLKLNAWKQLASEEGKRVPEDGDV 180

Query: 181 QKLMLYGGADHVLQK----------------------------LKTPVDGLKEWLDAVST 240
           QKLMLY GAD VLQK                            LKTPVDGLKEWLDAVST
Sbjct: 181 QKLMLYAGADQVLQKLLLWGMAESELDRLKLRFSELYYRGLLSLKTPVDGLKEWLDAVST 240

Query: 241 AHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIV 300
           A IPCAIVSSLDR HMLEALDRMSLKKYFQA+VTEED MESMAHRFLSAAVK        
Sbjct: 241 ARIPCAIVSSLDRIHMLEALDRMSLKKYFQAIVTEEDDMESMAHRFLSAAVK-------- 300

Query: 301 KLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 360
                                       LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI
Sbjct: 301 ----------------------------LDRKPSKCVVFEDDPRGITAAHNCTMMAIALI 355

Query: 361 GAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKRKLTIDTIF 393
           GAHPAYDLVQADLAV SFNELSVINLRRLFANKGSTFMELQKQ+ +KAPSKRKL IDTIF
Sbjct: 361 GAHPAYDLVQADLAVGSFNELSVINLRRLFANKGSTFMELQKQSAEKAPSKRKLRIDTIF 355

[Close]

BLAST of Carg00178 vs. ExPASy TrEMBL
Match: A0A5D3DQ68 (Pseudouridine-5'-phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00050 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 1.1e-151
Identity = 298/429 (69.46%), Postives = 311/429 (72.49%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPTSSSRF---------KFRNFKRFNFNKHSMVAMSVSESGEN 60
           MDC+CSNFR+STAPLSWTPTSSSRF         KFRN KR N  KHSMV MSVS S EN
Sbjct: 1   MDCTCSNFRSSTAPLSWTPTSSSRFPQSQFVSKLKFRNLKRMNLTKHSMVVMSVSGSREN 60

Query: 61  GSLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFS 120
           GSL RFP TPNKLFMQE IGAEYGEGFE+F PDG MKVDV                    
Sbjct: 61  GSLDRFPLTPNKLFMQEVIGAEYGEGFETFRPDGPMKVDV-------------------- 120

Query: 121 NPCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEG 180
                 DFLNDRLQEGFL+RIRYAMKPDEAYGL+FSWDNVVADTQTLKLN+WKQLASEEG
Sbjct: 121 ------DFLNDRLQEGFLQRIRYAMKPDEAYGLIFSWDNVVADTQTLKLNAWKQLASEEG 180

Query: 181 KRVPEDGDMQKLMLYGGADHVLQK----------------------------LKTPVDGL 240
           KRVPEDGD+QKLMLY GAD VLQK                            LKTPVDGL
Sbjct: 181 KRVPEDGDIQKLMLYEGADQVLQKLLRWGMAESELDRLKLRFSQLYYRGLLSLKTPVDGL 240

Query: 241 KEWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAV 300
           KEWL AVSTA IPCAIVSSLDRK MLEALDRMSLKKYFQA++TEEDGMESMAHRFLSAAV
Sbjct: 241 KEWLVAVSTARIPCAIVSSLDRKDMLEALDRMSLKKYFQAIITEEDGMESMAHRFLSAAV 300

Query: 301 KVTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHN 360
           K                                    LDRKPSKCVVFEDDPRGITAAHN
Sbjct: 301 K------------------------------------LDRKPSKCVVFEDDPRGITAAHN 360

Query: 361 CTMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSK 393
           CTMMAIALIGAH AYDLVQADLAV S+NELSVINLRRLFANKGSTFM+LQKQ+V+KAPSK
Sbjct: 361 CTMMAIALIGAHRAYDLVQADLAVGSYNELSVINLRRLFANKGSTFMDLQKQSVEKAPSK 367

[Close]

BLAST of Carg00178 vs. TAIR 10
Match: AT3G10970.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 418.3 bits (1074), Expect = 6.8e-117
Identity = 236/428 (55.14%), Postives = 279/428 (65.19%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPT-------SSSRFKFRNFKRFNFNKHSMVAMSVSESG-ENG 60
           MDCSCS  R S+  +S  P+        SS   F+  K     K  +V  S S S  +NG
Sbjct: 1   MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVKQRLVVRSSSGSDYQNG 60

Query: 61  SLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSN 120
            ++ FP  PNKLFMQEAIGAEYGEGFE+F  DG +KVDV                     
Sbjct: 61  DVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDV--------------------- 120

Query: 121 PCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGK 180
                DF N++LQ+GFL+RIRYAMKPDEAYGL+FSWDNVVADT++LKL +WKQLA+EEGK
Sbjct: 121 -----DFWNEKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGK 180

Query: 181 RVPEDGDMQKLMLYGGADHVLQ----------------------------KLKTPVDGLK 240
            + E+ D+Q+LMLY GADHVL+                            KL  P +GL+
Sbjct: 181 EITEEVDIQRLMLYAGADHVLRKVLFWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLR 240

Query: 241 EWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK 300
           +WLDAV+TA IPCA+VS+LDRK+M+ AL+RM L+KYFQAVV+EEDGMES+AHRFLSAAVK
Sbjct: 241 DWLDAVTTARIPCAVVSNLDRKNMINALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVK 300

Query: 301 VTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNC 360
                                               LDRKPSKCVVFEDDPRGITAAHNC
Sbjct: 301 ------------------------------------LDRKPSKCVVFEDDPRGITAAHNC 360

Query: 361 TMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKR 393
           TMMA+ LIGAH AYDLVQADLAV +F ELSVINLRRLFANKGSTFM+ +KQ ++K+P KR
Sbjct: 361 TMMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKR 365

[Close]

BLAST of Carg00178 vs. TAIR 10
Match: AT3G10970.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 417.2 bits (1071), Expect = 1.5e-116
Identity = 235/428 (54.91%), Postives = 279/428 (65.19%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPT-------SSSRFKFRNFKRFNFNKHSMVAMSVSESG-ENG 60
           MDCSCS  R S+  +S  P+        SS   F+  K     K  +V  S S S  +NG
Sbjct: 1   MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVKQRLVVRSSSGSDYQNG 60

Query: 61  SLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSN 120
            ++ FP  PNKLFMQEAIGAEYGEGFE+F  DG +KVDV                     
Sbjct: 61  DVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDV--------------------- 120

Query: 121 PCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGK 180
                DF N++LQ+GFL+RIRYAMKPDEAYGL+FSWDNVVADT++LKL +WKQLA+EEGK
Sbjct: 121 -----DFWNEKLQDGFLQRIRYAMKPDEAYGLIFSWDNVVADTRSLKLEAWKQLAAEEGK 180

Query: 181 RVPEDGDMQKLMLYGGADHVLQ----------------------------KLKTPVDGLK 240
            + E+ D+Q+LMLY GADHVL+                            KL  P +GL+
Sbjct: 181 EITEEVDIQRLMLYAGADHVLRKVLFWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLR 240

Query: 241 EWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK 300
           +WLDAV+TA IPCA+VS+LDRK+M+ AL+RM L+KYFQA+V+EEDGMES+AHRFLSAAVK
Sbjct: 241 DWLDAVTTARIPCAVVSNLDRKNMINALERMGLQKYFQAMVSEEDGMESIAHRFLSAAVK 300

Query: 301 VTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNC 360
                                               LDRKPSKCVVFEDDPRGITAAHNC
Sbjct: 301 ------------------------------------LDRKPSKCVVFEDDPRGITAAHNC 360

Query: 361 TMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKR 393
           TMMA+ LIGAH AYDLVQADLAV +F ELSVINLRRLFANKGSTFM+ +KQ ++K+P KR
Sbjct: 361 TMMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKR 365

[Close]

BLAST of Carg00178 vs. TAIR 10
Match: AT3G10970.3 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 412.1 bits (1058), Expect = 4.8e-115
Identity = 235/428 (54.91%), Postives = 278/428 (64.95%), Query Frame = 0


Query: 1   MDCSCSNFRTSTAPLSWTPT-------SSSRFKFRNFKRFNFNKHSMVAMSVSESG-ENG 60
           MDCSCS  R S+  +S  P+        SS   F+  K     K  +V  S S S  +NG
Sbjct: 1   MDCSCST-RPSSLLISSEPSFRFPHSNFSSNLSFQIPKDTKLVKQRLVVRSSSGSDYQNG 60

Query: 61  SLHRFPFTPNKLFMQEAIGAEYGEGFESFSPDGLMKVDVVRKKWCKYNYIQAISLLLFSN 120
            ++ FP  PNKLFMQEAIGAEYGEGFE+F  DG +KVDV                     
Sbjct: 61  DVNGFPLKPNKLFMQEAIGAEYGEGFETFRQDGPLKVDV--------------------- 120

Query: 121 PCGNQDFLNDRLQEGFLKRIRYAMKPDEAYGLVFSWDNVVADTQTLKLNSWKQLASEEGK 180
                DF N++LQ+GFL+RIRYAMKPDEAYGL+FSWDN VADT++LKL +WKQLA+EEGK
Sbjct: 121 -----DFWNEKLQDGFLQRIRYAMKPDEAYGLIFSWDN-VADTRSLKLEAWKQLAAEEGK 180

Query: 181 RVPEDGDMQKLMLYGGADHVLQ----------------------------KLKTPVDGLK 240
            + E+ D+Q+LMLY GADHVL+                            KL  P +GL+
Sbjct: 181 EITEEVDIQRLMLYAGADHVLRKVLFWEKTQSKIDRLKLRLSEIYYDSLLKLTEPKEGLR 240

Query: 241 EWLDAVSTAHIPCAIVSSLDRKHMLEALDRMSLKKYFQAVVTEEDGMESMAHRFLSAAVK 300
           +WLDAV+TA IPCA+VS+LDRK+M+ AL+RM L+KYFQAVV+EEDGMES+AHRFLSAAVK
Sbjct: 241 DWLDAVTTARIPCAVVSNLDRKNMINALERMGLQKYFQAVVSEEDGMESIAHRFLSAAVK 300

Query: 301 VTSDSHIVKLEYNGNQKQHSFHRCIGDVHECVYLLQLDRKPSKCVVFEDDPRGITAAHNC 360
                                               LDRKPSKCVVFEDDPRGITAAHNC
Sbjct: 301 ------------------------------------LDRKPSKCVVFEDDPRGITAAHNC 360

Query: 361 TMMAIALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVKKAPSKR 393
           TMMA+ LIGAH AYDLVQADLAV +F ELSVINLRRLFANKGSTFM+ +KQ ++K+P KR
Sbjct: 361 TMMAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLFANKGSTFMDHEKQIIEKSPPKR 364

[Close]

BLAST of Carg00178 vs. TAIR 10
Match: AT4G11570.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 70/272 (25.74%), Postives = 118/272 (43.38%), Query Frame = 0


Query: 143 GLVFSWDNV-VADTQTLKLNSWKQLASEEGKRVPEDGDMQKL-----------MLYGGAD 202
           G +F W+ V + D   L   SW  LA EEGK  P    ++++           +L    D
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKSPPPAFMLRRVEGMKNEQAISEVLCWSRD 188

Query: 203 HV----LQKLKTPV------------DGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDR 262
            V    + K K  +            DG +E+++ +    IP A+VS+  R+ +  A+  
Sbjct: 189 PVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGS 248

Query: 263 MSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHE 322
           + ++K+F  +V  ED                          Y G      F         
Sbjct: 249 IGIRKFFSVIVASED-------------------------VYRGKPDPEMF--------- 308

Query: 323 CVYLLQ-LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNEL 382
            +Y  Q LD  P +C+VF +  + I AAH+  M  +A+   HP Y+L  A+L V   +EL
Sbjct: 309 -IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVASKHPIYELGAAELVVRRLDEL 365

[Close]

BLAST of Carg00178 vs. TAIR 10
Match: AT4G11570.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 70/272 (25.74%), Postives = 118/272 (43.38%), Query Frame = 0


Query: 143 GLVFSWDNV-VADTQTLKLNSWKQLASEEGKRVPEDGDMQKL-----------MLYGGAD 202
           G +F W+ V + D   L   SW  LA EEGK  P    ++++           +L    D
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKSPPPAFMLRRVEGMKNEQAISEVLCWSRD 188

Query: 203 HV----LQKLKTPV------------DGLKEWLDAVSTAHIPCAIVSSLDRKHMLEALDR 262
            V    + K K  +            DG +E+++ +    IP A+VS+  R+ +  A+  
Sbjct: 189 PVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGS 248

Query: 263 MSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDSHIVKLEYNGNQKQHSFHRCIGDVHE 322
           + ++K+F  +V  ED                          Y G      F         
Sbjct: 249 IGIRKFFSVIVASED-------------------------VYRGKPDPEMF--------- 308

Query: 323 CVYLLQ-LDRKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLVQADLAVASFNEL 382
            +Y  Q LD  P +C+VF +  + I AAH+  M  +A+   HP Y+L  A+L V   +EL
Sbjct: 309 -IYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKCVAVASKHPIYELGAAELVVRRLDEL 365

The following BLAST results are available for this feature:

BLAST of Carg00178 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031523.1	4.0e-228	100.00	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic [Cucurbita...	[more]
KAG6600888.1	1.2e-171	78.10	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic, partial [...	[more]
XP_023544709.1	1.7e-170	77.62	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
XP_022941691.1	2.8e-165	75.48	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
XP_022941854.1	2.6e-155	71.90	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]

BLAST of Carg00178 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDD5	1.9e-15	25.74	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabido...	[more]
Q9X0Y1	1.2e-04	24.15	Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ...	[more]

BLAST of Carg00178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLT2	1.4e-165	75.48	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
A0A6J1FPN1	1.3e-155	71.90	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
A0A6J1K9N2	7.7e-153	71.33	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
A0A6J1FM90	7.7e-153	71.43	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like isofo...	[more]
A0A5D3DQ68	1.1e-151	69.46	Pseudouridine-5'-phosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Carg00178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10970.1	6.8e-117	55.14	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT3G10970.2	1.5e-116	54.91	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT3G10970.3	4.8e-115	54.91	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT4G11570.1	1.4e-16	25.74	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]
AT4G11570.2	1.4e-16	25.74	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 188..359 e-value: 1.6E-17 score: 65.6
IPR041492	Haloacid dehalogenase-like hydrolase	PFAM	PF13419	HAD_2	coord: 194..249 e-value: 1.5E-6 score: 28.4
None	No IPR available	PANTHER	PTHR47858:SF3	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 3..91
None	No IPR available	PANTHER	PTHR47858:SF3	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 194..273
None	No IPR available	PANTHER	PTHR47858	HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN	coord: 118..196 coord: 194..273
None	No IPR available	PANTHER	PTHR47858	HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN	coord: 299..392
None	No IPR available	PANTHER	PTHR47858	HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN	coord: 3..91
None	No IPR available	PANTHER	PTHR47858:SF3	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 299..392
None	No IPR available	PANTHER	PTHR47858:SF3	HALOACID DEHALOGENASE-LIKE HYDROLASE	coord: 118..196
None	No IPR available	CDD	cd07505	HAD_BPGM-like	coord: 143..333 e-value: 6.82922E-24 score: 94.2199
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 118..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00178-RA	Carg00178-RA	mRNA