Carg00089 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg00089
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH111
Location	Carg_Chr04: 5222006 .. 5223952 (-)
RNA-Seq Expression	Carg00089
Synteny	Carg00089

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGACTGCACCGACACCTCCGTTGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAATCACCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGATTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCCACCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGTAATTTCCTTTTTTTTTTTTTTTTTAATTATCTAATAATAATATATATTCGAATTACTACTCATAATATTTTTATTTAACCTTCACAGGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCAAATCTCGTCAACACTTGGTCCATAGCCCTGCCCAGCCCTGACGCCCATCTCCGCCATCTCATCGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATAATCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTGCTCGGTGTTAATCCTTCCATTAAGTCCTTGAATTTGTCAGCTCAAAGTAAGAAGCAGATTCAACAAATTTCTTCGCCAGTAAGCAAATTAATCGCTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAATTTAAATAAGATTTCTCCATTTTTTTTTTCATTGATCCATAATAAAATTAAGCTTCACAATTAAAAGTGTTTATAAACAAGGAATTGAATTTTATATTGTTCATGAATTGAAATGAAAATCATTAATTTAATTTTAATTTTAAATTTTTTAAAATGGGTTTGAATTTATTGAATGACATTGCAGACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGGTTCGGTTTCGGGTTTCGGGTTTCGGGTTTCGAGTTTCGAGTTTCAATTTGATCTCTATAGCGTTTTTGTAATATTTTAAAGGGTTTATGATACAATGAACAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGGTGAATTTAGAACTTGAAAAGAAGGAAACATTTCATTTTCCATTTTATTTATTTATTTATTATTATTATTCCTTCTCAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGGTTTGTTTCATATAATCTTCTCTTTAATCATTCAATATGGAATTCCAACGATCTGGGACTCCAACAATCTTTATACTAAATGTAATGGTTTGTGTTTATAAGTGTTTTTTTTTTTTGTTCCATATTTCAGCTGCTGACGAATCCTTACATGAAGGCGAATTCGTATAAGGTATAAAGAATTGAATATGAATATGAATATGAATATGAATAGAAGTAATGTTGATACGGGGTTATGTACGTTTAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCTGACTATTGGACGCCGTACAGAGGGTGTTTCTATAGATAG

mRNA sequence

ATGGCGGACGACTGCACCGACACCTCCGTTGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAATCACCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGATTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCCACCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCAAATCTCGTCAACACTTGGTCCATAGCCCTGCCCAGCCCTGACGCCCATCTCCGCCATCTCATCGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATAATCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTGCTCGGTGTTAATCCTTCCATTAAGTCCTTGAATTTGTCAGCTCAAAGTAAGAAGCAGATTCAACAAATTTCTTCGCCAACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGCTGCTGACGAATCCTTACATGAAGGCGAATTCGTATAAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCTGACTATTGGACGCCGTACAGAGGGTGTTTCTATAGATAG

Coding sequence (CDS)

ATGGCGGACGACTGCACCGACACCTCCGTTGCCACCTCTTCCACTCCACCCAACTGGTGGGATACCCACAATCACCACCACCATCATTATAACTCCAACTCCTCTTGCGACGACGACGTTTCAATCTCCACCTCCTCCTTCACCAACGCTTCCAATCACTCCGCTCTCACCCTCGATTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCCACCTTCTTCCCCACCACGCTTCCGATCATCATCTCTGGACCCAAGTTTTATTGAACATTGGAAACGGCGTGGAAGACATACAACCAAATTTCCTGGAACCCATTGCATGTAGCGATTACCTTAAAAAAATGGACACAAACACCAACTGGGACGACACTTTTCAAACCTTCAACAACAATAACGGACTTCTCACAACCCTAGAAAACGAGCGGTTGTTGAAGCTTTCAAATCTCGTCAACACTTGGTCCATAGCCCTGCCCAGCCCTGACGCCCATCTCCGCCATCTCATCGACCAGGAACCCCACCCTCTCCGACCCACCACCCTCCTCGACCCAGACGCCGCCCTCGACCCATGTGCCTCCGCCTTCTTTAGGCGCTCGCTTCATAATCCGATGCCCGCCAAGCCCTTCTATGATAACCACACCGCCACTACCCGTAATTATGGTGATTATATCTCCTTTAATCCACGATTTGCTAAGCCACTGCTCGGTGTTAATCCTTCCATTAAGTCCTTGAATTTGTCAGCTCAAAGTAAGAAGCAGATTCAACAAATTTCTTCGCCAACAAGAGGTAGTGGGCGAGGAAGTGGAGTTTTGAACGAAGGGAAGAAGAAAAGATCTGAAGAATCTTCTGAAACTGTCACCAAAAAGGCTAAACAAGATAACTCAACAACACCTGCTTCTACTAAGATTCAGCAACCAAAGGTCAAAATTGGGGATAGAATCACGACCCTTCAACAAATTGTGTCACCATTTGGAAAGACTGATACCGCGTCGGTTCTAAACGAAACCATTGGATACATTAAATTCCTACAAGAACAAGTTCAGCTGCTGACGAATCCTTACATGAAGGCGAATTCGTATAAGGATGCATGGCAAAGCTTGGAGAGGAAGGAATCAAAAGGGGAAGGGAAAATGGAGCTAAGGAGCAGAGGGCTGTGTTTAGTTCCAATTTCATGCACGCCACAAGTGTATAGAGAGAACAGTGGATCTGACTATTGGACGCCGTACAGAGGGTGTTTCTATAGATAG

Protein sequence

MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDSSSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWDDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLDPDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKSLNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR

Homology

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BLAST of Carg00089 vs. NCBI nr
Match: KAG7031435.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 825.5 bits (2131), Expect = 2.1e-235
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60
           MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
           SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD
Sbjct: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS
Sbjct: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240

Query: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
           LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI
Sbjct: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 412

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BLAST of Carg00089 vs. NCBI nr
Match: XP_022942808.1 (transcription factor bHLH111 [Cucurbita moschata])

HSP 1 Score: 814.7 bits (2103), Expect = 3.7e-232
Identity = 408/412 (99.03%), Postives = 410/412 (99.51%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60
           MADDCTDTSVATSSTPPNWWDTHNHHHHHYNS+SSCDDDVSISTSSFTNASNHSALTLDS
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSSSSCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
           SS AAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD
Sbjct: 61  SS-AAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS
Sbjct: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240

Query: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
           LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNS TPASTKI
Sbjct: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSATPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 411

[Close]

BLAST of Carg00089 vs. NCBI nr
Match: KAG6600795.1 (Transcription factor basic helix-loop-helix 111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 813.9 bits (2101), Expect = 6.2e-232
Identity = 410/412 (99.51%), Postives = 410/412 (99.51%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60
           MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSN SCDDDVSISTSSFTNASNHSALTLDS
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSN-SCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
           SS AAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD
Sbjct: 61  SS-AAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS
Sbjct: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240

Query: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
           LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI
Sbjct: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 410

[Close]

BLAST of Carg00089 vs. NCBI nr
Match: XP_023549380.1 (transcription factor bHLH111 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 786.2 bits (2029), Expect = 1.4e-223
Identity = 395/412 (95.87%), Postives = 399/412 (96.84%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60
           MADDCTDTSVATSSTPPNWWDTH+ HHHHYNSNSSCDDDVSISTSSFTNASNHSALTLD 
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHS-HHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDC 60

Query: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
           SS      A LLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD
Sbjct: 61  SS------AQLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PDAALDPCASAFFRRSLH PMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS
Sbjct: 181 PDAALDPCASAFFRRSLHTPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240

Query: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
            NLS Q+KKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI
Sbjct: 241 FNLSPQTKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPY+K NSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYLKTNSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 405

[Close]

BLAST of Carg00089 vs. NCBI nr
Match: XP_022993171.1 (transcription factor bHLH111 [Cucurbita maxima])

HSP 1 Score: 777.7 bits (2007), Expect = 4.9e-221
Identity = 394/413 (95.40%), Postives = 402/413 (97.34%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHN-HHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLD 60
           MADDCTD+SVATSSTPPNWW+THN HHHHHYNSNSSCDDDV ISTSSFTNASNHSALTLD
Sbjct: 1   MADDCTDSSVATSSTPPNWWNTHNHHHHHHYNSNSSCDDDVFISTSSFTNASNHSALTLD 60

Query: 61  SSSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNW 120
           SSS +AAAAAHLLPHHASDHHLWTQVLLNIGNGVE+IQPNFLEPIACSDYLKKMDT+TNW
Sbjct: 61  SSS-SAAAAAHLLPHHASDHHLWTQVLLNIGNGVEEIQPNFLEPIACSDYLKKMDTHTNW 120

Query: 121 DDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLL 180
           DDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLL
Sbjct: 121 DDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLL 180

Query: 181 DPDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIK 240
           DPD+ALDPCASAFFRRSLHNPMPAKPF     ATTRNYGDYISFNPRFAKPLLGVNPSI 
Sbjct: 181 DPDSALDPCASAFFRRSLHNPMPAKPF-----ATTRNYGDYISFNPRFAKPLLGVNPSIN 240

Query: 241 SLNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK 300
           SLNLSAQSKKQI+QISSPTRGSGRG GVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK
Sbjct: 241 SLNLSAQSKKQIRQISSPTRGSGRGGGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK 300

Query: 301 IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKD 360
           IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMK NSYKD
Sbjct: 301 IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKTNSYKD 360

Query: 361 AWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           AWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 AWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 407

[Close]

BLAST of Carg00089 vs. ExPASy Swiss-Prot
Match: Q9FYJ6 (Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.3e-42
Identity = 127/293 (43.34%), Postives = 170/293 (58.02%), Query Frame = 0


Query: 138 NERLLKLSNLVNT-WSIALP-SPDA--HLRHLIDQEPHPLRPTTL----LDPDAALDPC- 197
           ++RL KL++LV   WSIA P +PD   +L H  D +       ++    L+     D C 
Sbjct: 47  DQRLSKLTDLVGKHWSIAPPNNPDMNHNLHHHFDHDHSQNDDISMYRQALEVKNEEDLCY 106

Query: 198 --ASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPS----IKSLN 257
              S+      H+P+           ++R++ D      R ++PL  +NPS     K+LN
Sbjct: 107 NNGSSGGGSLFHDPI----------ESSRSFLDI-----RLSRPLTDINPSFKPCFKALN 166

Query: 258 LSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQ 317
           +S  +KK+ Q  S     +    G  N GKKKR EE S+ V+KKAK    +T +  K + 
Sbjct: 167 VSEFNKKEHQTASL----AAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEK-EL 226

Query: 318 PKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQ 377
           PK K+ D+ITTLQQIVSPFGKTDTASVL E I YI F QEQV+LL+ PYMK +S KD W 
Sbjct: 227 PKAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWG 286

Query: 378 SLERKE--SKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTP-YRGCFYR 413
             +R++   +G   ++LRSRGLCLVPIS TP  YR+NS +DYW P YRG  YR
Sbjct: 287 GWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNPTYRGSLYR 319

[Close]

BLAST of Carg00089 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.2e-21
Identity = 83/226 (36.73%), Postives = 117/226 (51.77%), Query Frame = 0


Query: 190 SAFFRRSLHNPMPAKPFYDNHTATTRN---YGDYISFNPRFAKPLLGVNPSIKSLNLSAQ 249
           S +F RS   P P  P   ++ AT  N    G+  +  P  A       P+++   +  Q
Sbjct: 242 STWFLRSSPPPKPHSPLRFSNNATFWNPAAAGNAGAPPPHDASS--NFFPALQPPQIHPQ 301

Query: 250 SKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 309
           S  +  +  S  R S       +  + KR     +   K+AK + ++   + K    K K
Sbjct: 302 SFDEQPKNISEIRDS-------SSNEVKRGGNDHQPAAKRAKSEAASPSPAFK---RKEK 361

Query: 310 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQSLER 369
           +GDRI  LQQ+VSPFGKTD ASVL+E I YIKFL +QV  L+NPYMK+ +     QS   
Sbjct: 362 MGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS 421

Query: 370 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
            E +   + +LRSRGLCLVP+S T  V  + +  D+WTP  G  +R
Sbjct: 422 TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTT-VDFWTPTFGGTFR 454

[Close]

BLAST of Carg00089 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-19
Identity = 71/182 (39.01%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 268 LNEGKKKRSEESSE--------TVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVS 327
           L+EG+    + SSE        +  KK +   S +  ST ++  K K+G RI  L Q+VS
Sbjct: 223 LSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQST-LKVRKEKLGGRIAALHQLVS 282

Query: 328 PFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSY------------------KDAW 387
           PFGKTDTASVL+E IGYI+FLQ Q++ L++PY    +                   +D  
Sbjct: 283 PFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPG 342

Query: 388 Q---------------SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPY 409
           Q               S + + +  E K +LRSRGLCLVPISCT QV  +N G+DYW P 
Sbjct: 343 QLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDN-GADYWAPA 402

[Close]

BLAST of Carg00089 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.8e-19
Identity = 64/150 (42.67%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 270 EGKKKRSEESSETVTKKAKQDNSTTPASTKIQQP---------KVKIGDRITTLQQIVSP 329
           E K K  +  +++ + K  +DN +     ++  P         K  + D+IT+LQQ+VSP
Sbjct: 240 EDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSP 299

Query: 330 FGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQSLERK-ESKGEGK-MELR 389
           FGKTDTASVL E I YIKFL +QV +L+ PYMK  +     Q +  K +S+ E +  ELR
Sbjct: 300 FGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELR 359

Query: 390 SRGLCLVPISCTPQVYRENSGSDYWTPYRG 409
             GLCLVPIS T  V  E + +D+WTP  G
Sbjct: 360 GHGLCLVPISSTFPVANETT-ADFWTPTFG 388

[Close]

BLAST of Carg00089 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 3.0e-19
Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 0


Query: 242 NLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKR---SEESSETVTKKAKQDNSTTPAST 301
           +LS+    Q++  S+  + S        EGK+     + ++ E  +KK + ++ ++    
Sbjct: 280 HLSSSPTHQMEMFSNEPQTS--------EGKRHNFLMATKAGENASKKPRVESRSSCPPF 339

Query: 302 KIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYK 361
           K++  K K+GDRI  LQQ+VSPFGKTDTASVL E IGYIKFLQ Q++ L+ PYM+A+  +
Sbjct: 340 KVR--KEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNR 399

Query: 362 DAWQS---LERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSD 402
               S    + +E   E   +LRSRGLCLVP+SC    Y    G D
Sbjct: 400 PGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSC--MTYVTGDGGD 433

[Close]

BLAST of Carg00089 vs. ExPASy TrEMBL
Match: A0A6J1FVQ7 (transcription factor bHLH111 OS=Cucurbita moschata OX=3662 GN=LOC111447729 PE=4 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 1.8e-232
Identity = 408/412 (99.03%), Postives = 410/412 (99.51%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLDS 60
           MADDCTDTSVATSSTPPNWWDTHNHHHHHYNS+SSCDDDVSISTSSFTNASNHSALTLDS
Sbjct: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHYNSSSSCDDDVSISTSSFTNASNHSALTLDS 60

Query: 61  SSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120
           SS AAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD
Sbjct: 61  SS-AAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNWD 120

Query: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLLD 180
           DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLLD
Sbjct: 121 DTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLLD 180

Query: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240
           PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS
Sbjct: 181 PDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIKS 240

Query: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKI 300
           LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNS TPASTKI
Sbjct: 241 LNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSATPASTKI 300

Query: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360
           QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA
Sbjct: 301 QQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDA 360

Query: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 WQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 411

[Close]

BLAST of Carg00089 vs. ExPASy TrEMBL
Match: A0A6J1JVK8 (transcription factor bHLH111 OS=Cucurbita maxima OX=3661 GN=LOC111489267 PE=4 SV=1)

HSP 1 Score: 777.7 bits (2007), Expect = 2.4e-221
Identity = 394/413 (95.40%), Postives = 402/413 (97.34%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHN-HHHHHYNSNSSCDDDVSISTSSFTNASNHSALTLD 60
           MADDCTD+SVATSSTPPNWW+THN HHHHHYNSNSSCDDDV ISTSSFTNASNHSALTLD
Sbjct: 1   MADDCTDSSVATSSTPPNWWNTHNHHHHHHYNSNSSCDDDVFISTSSFTNASNHSALTLD 60

Query: 61  SSSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVEDIQPNFLEPIACSDYLKKMDTNTNW 120
           SSS +AAAAAHLLPHHASDHHLWTQVLLNIGNGVE+IQPNFLEPIACSDYLKKMDT+TNW
Sbjct: 61  SSS-SAAAAAHLLPHHASDHHLWTQVLLNIGNGVEEIQPNFLEPIACSDYLKKMDTHTNW 120

Query: 121 DDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTLL 180
           DDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHL+DQEPHPLRPTTLL
Sbjct: 121 DDTFQTFNNNNGLLTTLENERLLKLSNLVNTWSIALPSPDAHLRHLMDQEPHPLRPTTLL 180

Query: 181 DPDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPSIK 240
           DPD+ALDPCASAFFRRSLHNPMPAKPF     ATTRNYGDYISFNPRFAKPLLGVNPSI 
Sbjct: 181 DPDSALDPCASAFFRRSLHNPMPAKPF-----ATTRNYGDYISFNPRFAKPLLGVNPSIN 240

Query: 241 SLNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK 300
           SLNLSAQSKKQI+QISSPTRGSGRG GVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK
Sbjct: 241 SLNLSAQSKKQIRQISSPTRGSGRGGGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTK 300

Query: 301 IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKD 360
           IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMK NSYKD
Sbjct: 301 IQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKTNSYKD 360

Query: 361 AWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
           AWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR
Sbjct: 361 AWQSLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 407

[Close]

BLAST of Carg00089 vs. ExPASy TrEMBL
Match: A0A0A0KQW5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G269890 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.6e-143
Identity = 313/483 (64.80%), Postives = 341/483 (70.60%), Query Frame = 0


Query: 1   MADDCTDTSVATS-STPPNWWD---THNHHHHHY--------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    HNHHHHH+              NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDSSSAAAAAAAHLLPHHASD-HHLWTQVLLNIGNGV------ED 120
           STSSFTNASN                 HLLPHH SD +HLWTQVLLNIGN V      E+
Sbjct: 61  STSSFTNASN-----------------HLLPHHPSDNNHLWTQVLLNIGNDVELESNEEN 120

Query: 121 IQPNFLEPI---------------ACSDYLKKMDT----NTNWDDTFQTF----NNNNGL 180
           I+ NFLE I               ACSDYLKKMDT    N NWDDTFQTF    NNNN L
Sbjct: 121 IEGNFLETISSRSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRL 180

Query: 181 LTT----LENERLLKLSNLVNTWSIALPSPDAHLRHL-IDQEPHPLRPTT-----LLDPD 240
           LT+    L+NER LKLSNLVN WSIALP+PD HLRHL +D +   LR +T     +L+PD
Sbjct: 181 LTSHTHMLQNERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPD 240

Query: 241 A-----ALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPS 300
                  LDPC S+F RRSL N               +NYGDYISFN R AKP++G+N S
Sbjct: 241 GTMPHQGLDPCDSSFLRRSLQN---------------QNYGDYISFNGRLAKPVVGINGS 300

Query: 301 I------KSLNLSAQSKKQIQQISSPTRGSGRGS-GVLNEGKKKRSEE-SSETVTKKAKQ 360
                   SLNLSA SKKQI QI SPTR SGRGS GV NEGKKKRSEE SSET TKKAKQ
Sbjct: 301 SNNPCFKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQ 360

Query: 361 DNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTN 413
           DNS TP+S KIQQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+N
Sbjct: 361 DNS-TPSSNKIQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLSN 420

[Close]

BLAST of Carg00089 vs. ExPASy TrEMBL
Match: A0A1S3CD90 (transcription factor bHLH111 OS=Cucumis melo OX=3656 GN=LOC103499104 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.9e-142
Identity = 308/484 (63.64%), Postives = 334/484 (69.01%), Query Frame = 0


Query: 1   MADDCTDTSVATS-STPPNWWD---THNHHHHHY--------------NSNSSCDDDVSI 60
           MA++CT++SVATS STP NWWD    HNHHHHH+              NSNSSC++DVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHSALTLDSSSAAAAAAAHLLPHHASD-HHLWTQVLLNIGNGV------ED 120
           STSSFTN                    HLLPHH SD +HLWTQVLLNIGN V      ED
Sbjct: 61  STSSFTN--------------------HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEED 120

Query: 121 IQPNFL---------------EPIACSDYLKKMDT----NTNWDDTFQTF----NNNNGL 180
           I+ NFL               EP ACSDYLKKMDT    N NWDDTFQTF    NNNN L
Sbjct: 121 IEGNFLETISSRSSMSTTGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRL 180

Query: 181 LTT-----LENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTL--------- 240
           LT+     L+NER LKLSNLVN WSIALPSPD HLRHL D +   LR TT+         
Sbjct: 181 LTSSQAHMLQNERFLKLSNLVNRWSIALPSPDPHLRHLTDDQHDHLRATTVPTHEILESA 240

Query: 241 --LDPDAALDPCASAFFRRSLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNP 300
             + P   LDPC S+F RR+L N               +NYGDYISFN R AKP++G+N 
Sbjct: 241 DGVVPHQGLDPCDSSFLRRTLQN---------------QNYGDYISFNGRLAKPMVGINS 300

Query: 301 SI------KSLNLSAQSKKQIQQISSPTRGSGRGS-GVLNEGKKKRSEE-SSETVTKKAK 360
           S        SLNLSA SKKQI QI SPTR SGRGS GV NEGKKKRSEE SSET TKKAK
Sbjct: 301 SSNNPCFKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAK 360

Query: 361 QDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLT 413
           QDNS TP S K+QQPKVKIGDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQVQLL+
Sbjct: 361 QDNS-TPYSNKMQQPKVKIGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQVQLLS 420

[Close]

BLAST of Carg00089 vs. ExPASy TrEMBL
Match: A0A6J1E0R5 (transcription factor bHLH111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025348 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 1.2e-127
Identity = 286/488 (58.61%), Postives = 327/488 (67.01%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWWDTHNHHHHHY-----------------NSNSSCDDDVSIS 60
           M D+CT++SVATSSTPPNWWD+HNH+HHH+                 NSN+SCD DVS+S
Sbjct: 1   MGDECTESSVATSSTPPNWWDSHNHNHHHHGSPSLSSYSSHWPHQNPNSNTSCDQDVSLS 60

Query: 61  TSSFTNASNHSALTLDSSSAAAAAAAHLLPHHASDHHLWTQVLLNIGNGVE------DIQ 120
           TSSF     HSALT++SS         L     SD+ LWTQVLLNIGNGVE      +I 
Sbjct: 61  TSSF-----HSALTVESS-------RRLFDPLPSDNQLWTQVLLNIGNGVELQSDEQEIG 120

Query: 121 PNFLEPI--------------ACSDYLKKMDT--NTNWD-----DTFQTFNNNNGLLTT- 180
            NFLE I              ACSDYLKKMDT  N NW+     D     NNNNGL+TT 
Sbjct: 121 ENFLEAISSKNISTTGIFESAACSDYLKKMDTNYNNNWNSFPIFDANNNNNNNNGLITTH 180

Query: 181 ---LENERLLKLSNLVNTWSIALPSPDAHLRHLIDQEPHPLRPTTL---------LDPDA 240
               ENERLLKLS+LVNTWSIALP         +D EP  LR  T+           P+A
Sbjct: 181 SHAAENERLLKLSSLVNTWSIALP---------MDDEPDHLRAATVPCFGHGLKAEAPEA 240

Query: 241 A------LDPCASAFFRRS-----LHNPMPAKPFYDN----HTATTRNYGDYISFNPRFA 300
                  L+P  +A FRRS       N + AK  YD+      A TRN+ DYISFN R  
Sbjct: 241 GTVAPIRLEP-GAALFRRSFGSGGFQNSIGAKQ-YDHSMQLDNAGTRNFADYISFNGRLG 300

Query: 301 KPLLGV----NPSIKSLNLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVT 360
           KP++ +    NP  KSLNLSA +KKQI Q SSPTR SGRGSGV +EGKKKRSEE SET T
Sbjct: 301 KPVININGINNPCFKSLNLSADTKKQIHQTSSPTRISGRGSGVSSEGKKKRSEECSETAT 360

Query: 361 KKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQV 413
           KK KQ+N+T  AS K+QQPKVK+GDRIT LQQIVSPFGKTDTASVL ETIGYIKFLQEQ+
Sbjct: 361 KKTKQENATA-ASNKMQQPKVKLGDRITALQQIVSPFGKTDTASVLTETIGYIKFLQEQI 420

[Close]

BLAST of Carg00089 vs. TAIR 10
Match: AT1G31050.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 1.9e-45
Identity = 166/464 (35.78%), Postives = 241/464 (51.94%), Query Frame = 0


Query: 1   MADDCTDTSVATSSTPPNWW-DTHNHHHHHYNS-----------------NSSCDDD-VS 60
           + ++CT +S        +WW D  +HH+ H NS                 N+SC++D +S
Sbjct: 2   LREECTPSS--------SWWEDVQHHHNDHANSISSTSFYHKSSNNNSHANASCEEDNLS 61

Query: 61  ISTSSFTN-------ASNHSALTLDSSSAAAAAAAHLLPHH--ASDHHLWTQVLLNIGNG 120
           +ST   +N       +SNH +L+  +S+  A+++  LL  H  +S +HLW+   L  G  
Sbjct: 62  VSTVRASNRLDLTAESSNHHSLS--ASNQPASSSDELLRDHVVSSHNHLWSLAFLP-GRS 121

Query: 121 VEDIQPNFLEPIACSDYLKKMDTNT------NWDDTFQTFNNNNGLLTTLENERLLKLSN 180
           + D   +    IA  +     +  +      N +     ++ N        ++RL KL++
Sbjct: 122 LGDQMMDHHHHIASRNSSTTSELPSFEPACHNGNGNGWIYDPNQVRYDQSSDQRLSKLTD 181

Query: 181 LVNT-WSIALP-SPDA--HLRHLIDQEPHPLRPTTL----LDPDAALDPC---ASAFFRR 240
           LV   WSIA P +PD   +L H  D +       ++    L+     D C    S+    
Sbjct: 182 LVGKHWSIAPPNNPDMNHNLHHHFDHDHSQNDDISMYRQALEVKNEEDLCYNNGSSGGGS 241

Query: 241 SLHNPMPAKPFYDNHTATTRNYGDYISFNPRFAKPLLGVNPS----IKSLNLSAQSKKQI 300
             H+P+           ++R++ D      R ++PL  +NPS     K+LN+S  +KK+ 
Sbjct: 242 LFHDPI----------ESSRSFLDI-----RLSRPLTDINPSFKPCFKALNVSEFNKKEH 301

Query: 301 QQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVKIGDRI 360
           Q  S     +    G  N GKKKR EE S+ V+KKAK    +T +  K + PK K+ D+I
Sbjct: 302 QTASL----AAVRLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEK-ELPKAKLRDKI 361

Query: 361 TTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQSLERKE--S 413
           TTLQQIVSPFGKTDTASVL E I YI F QEQV+LL+ PYMK +S KD W   +R++   
Sbjct: 362 TTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSMKDPWGGWDREDHNK 421

[Close]

BLAST of Carg00089 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-22
Identity = 83/226 (36.73%), Postives = 117/226 (51.77%), Query Frame = 0


Query: 190 SAFFRRSLHNPMPAKPFYDNHTATTRN---YGDYISFNPRFAKPLLGVNPSIKSLNLSAQ 249
           S +F RS   P P  P   ++ AT  N    G+  +  P  A       P+++   +  Q
Sbjct: 242 STWFLRSSPPPKPHSPLRFSNNATFWNPAAAGNAGAPPPHDASS--NFFPALQPPQIHPQ 301

Query: 250 SKKQIQQISSPTRGSGRGSGVLNEGKKKRSEESSETVTKKAKQDNSTTPASTKIQQPKVK 309
           S  +  +  S  R S       +  + KR     +   K+AK + ++   + K    K K
Sbjct: 302 SFDEQPKNISEIRDS-------SSNEVKRGGNDHQPAAKRAKSEAASPSPAFK---RKEK 361

Query: 310 IGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQSLER 369
           +GDRI  LQQ+VSPFGKTD ASVL+E I YIKFL +QV  L+NPYMK+ +     QS   
Sbjct: 362 MGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHS 421

Query: 370 KESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPYRGCFYR 413
            E +   + +LRSRGLCLVP+S T  V  + +  D+WTP  G  +R
Sbjct: 422 TELEVSEEPDLRSRGLCLVPVSSTFPVTHDTT-VDFWTPTFGGTFR 454

[Close]

BLAST of Carg00089 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 7.3e-21
Identity = 71/182 (39.01%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 268 LNEGKKKRSEESSE--------TVTKKAKQDNSTTPASTKIQQPKVKIGDRITTLQQIVS 327
           L+EG+    + SSE        +  KK +   S +  ST ++  K K+G RI  L Q+VS
Sbjct: 223 LSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQST-LKVRKEKLGGRIAALHQLVS 282

Query: 328 PFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSY------------------KDAW 387
           PFGKTDTASVL+E IGYI+FLQ Q++ L++PY    +                   +D  
Sbjct: 283 PFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPG 342

Query: 388 Q---------------SLERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSDYWTPY 409
           Q               S + + +  E K +LRSRGLCLVPISCT QV  +N G+DYW P 
Sbjct: 343 QLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDN-GADYWAPA 402

[Close]

BLAST of Carg00089 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 64/150 (42.67%), Postives = 88/150 (58.67%), Query Frame = 0


Query: 270 EGKKKRSEESSETVTKKAKQDNSTTPASTKIQQP---------KVKIGDRITTLQQIVSP 329
           E K K  +  +++ + K  +DN +     ++  P         K  + D+IT+LQQ+VSP
Sbjct: 240 EDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSP 299

Query: 330 FGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYKDAWQSLERK-ESKGEGK-MELR 389
           FGKTDTASVL E I YIKFL +QV +L+ PYMK  +     Q +  K +S+ E +  ELR
Sbjct: 300 FGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELR 359

Query: 390 SRGLCLVPISCTPQVYRENSGSDYWTPYRG 409
             GLCLVPIS T  V  E + +D+WTP  G
Sbjct: 360 GHGLCLVPISSTFPVANETT-ADFWTPTFG 388

[Close]

BLAST of Carg00089 vs. TAIR 10
Match: AT1G27660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.1e-20
Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 0


Query: 242 NLSAQSKKQIQQISSPTRGSGRGSGVLNEGKKKR---SEESSETVTKKAKQDNSTTPAST 301
           +LS+    Q++  S+  + S        EGK+     + ++ E  +KK + ++ ++    
Sbjct: 280 HLSSSPTHQMEMFSNEPQTS--------EGKRHNFLMATKAGENASKKPRVESRSSCPPF 339

Query: 302 KIQQPKVKIGDRITTLQQIVSPFGKTDTASVLNETIGYIKFLQEQVQLLTNPYMKANSYK 361
           K++  K K+GDRI  LQQ+VSPFGKTDTASVL E IGYIKFLQ Q++ L+ PYM+A+  +
Sbjct: 340 KVR--KEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVPYMRASRNR 399

Query: 362 DAWQS---LERKESKGEGKMELRSRGLCLVPISCTPQVYRENSGSD 402
               S    + +E   E   +LRSRGLCLVP+SC    Y    G D
Sbjct: 400 PGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSC--MTYVTGDGGD 433

The following BLAST results are available for this feature:

BLAST of Carg00089 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031435.1	2.1e-235	100.00	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942808.1	3.7e-232	99.03	transcription factor bHLH111 [Cucurbita moschata]	[more]
KAG6600795.1	6.2e-232	99.51	Transcription factor basic helix-loop-helix 111, partial [Cucurbita argyrosperma...	[more]
XP_023549380.1	1.4e-223	95.87	transcription factor bHLH111 [Cucurbita pepo subsp. pepo]	[more]
XP_022993171.1	4.9e-221	95.40	transcription factor bHLH111 [Cucurbita maxima]	[more]

BLAST of Carg00089 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYJ6	4.3e-42	43.34	Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=...	[more]
Q8GXT3	4.2e-21	36.73	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q8S3D1	1.0e-19	39.01	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q94JL3	1.8e-19	42.67	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9SFZ3	3.0e-19	40.36	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]

BLAST of Carg00089 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVQ7	1.8e-232	99.03	transcription factor bHLH111 OS=Cucurbita moschata OX=3662 GN=LOC111447729 PE=4 ...	[more]
A0A6J1JVK8	2.4e-221	95.40	transcription factor bHLH111 OS=Cucurbita maxima OX=3661 GN=LOC111489267 PE=4 SV...	[more]
A0A0A0KQW5	2.6e-143	64.80	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G269890 PE=4 S...	[more]
A0A1S3CD90	2.9e-142	63.64	transcription factor bHLH111 OS=Cucumis melo OX=3656 GN=LOC103499104 PE=4 SV=1	[more]
A0A6J1E0R5	1.2e-127	58.61	transcription factor bHLH111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Carg00089 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31050.1	1.9e-45	35.78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	3.0e-22	36.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29100.1	7.3e-21	39.01	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	1.2e-20	42.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27660.1	2.1e-20	40.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 301..368 e-value: 7.1E-6 score: 28.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 306..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR16223:SF171	TRANSCRIPTION FACTOR BHLH111	coord: 19..399
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 19..399
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 301..347 e-value: 1.82962E-19 score: 79.5327
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 291..340 score: 10.55004

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00089-RA	Carg00089-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding