Homology
BLAST of Carg00018 vs. NCBI nr
Match:
KAG7031364.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 856.7 bits (2212), Expect = 8.6e-245
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP
Sbjct: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN
Sbjct: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN
Sbjct: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
Query: 421 AFHE 425
AFHE
Sbjct: 421 AFHE 424
BLAST of Carg00018 vs. NCBI nr
Match:
XP_022941952.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata])
HSP 1 Score: 849.0 bits (2192), Expect = 1.8e-242
Identity = 421/424 (99.29%), Postives = 422/424 (99.53%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQRE+NLRQVISLKNLIVSSPFKSVP
Sbjct: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN
Sbjct: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENI CLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYI LMNKAV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNKAV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN
Sbjct: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
Query: 421 AFHE 425
AFHE
Sbjct: 421 AFHE 424
BLAST of Carg00018 vs. NCBI nr
Match:
XP_023536124.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 835.9 bits (2158), Expect = 1.6e-238
Identity = 415/424 (97.88%), Postives = 417/424 (98.35%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP
Sbjct: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVK+TSQALALHKEES IHN
Sbjct: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKITSQALALHKEESAIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIP LLADYPEYFQVCSVR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSVR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
D STGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNG HIAFPMSFPRGFDLEKKVL
Sbjct: 181 DRSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMN+AV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNQAV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
RRPRPRIILASSR KRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDD PCR TELQNN
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDRPCRATELQNN 420
Query: 421 AFHE 425
AFHE
Sbjct: 421 AFHE 424
BLAST of Carg00018 vs. NCBI nr
Match:
XP_022994938.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])
HSP 1 Score: 835.1 bits (2156), Expect = 2.7e-238
Identity = 413/424 (97.41%), Postives = 416/424 (98.11%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MIL VTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP
Sbjct: 1 MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSLMRQNLK PTTSISKF QLYPSVFIQFQPSLGLHPHVKLTSQ+LALHKEE TIHN
Sbjct: 61 LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDD+VKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIP LLADYPEYFQVCS+R
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNG HIAFPMSFPRGFDLEKKVL
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
RRPRPRIILASSR KRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDD PCRVTELQNN
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDRPCRVTELQNN 420
Query: 421 AFHE 425
AFHE
Sbjct: 421 AFHE 424
BLAST of Carg00018 vs. NCBI nr
Match:
KAG6600724.1 (Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 825.1 bits (2130), Expect = 2.8e-235
Identity = 409/410 (99.76%), Postives = 409/410 (99.76%), Query Frame = 0
Query: 15 TRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQNLKVP 74
TRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQNLKVP
Sbjct: 1030 TRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQNLKVP 1089
Query: 75 TTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDVVKRLAK 134
TTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDVVKRLAK
Sbjct: 1090 TTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDVVKRLAK 1149
Query: 135 LLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVRDCSTGEQTLALELL 194
LLMLTGAGKLPLYVIEKLQWDLGLPYK IPTLLADYPEYFQVCSVRDCSTGEQTLALELL
Sbjct: 1150 LLMLTGAGKLPLYVIEKLQWDLGLPYKLIPTLLADYPEYFQVCSVRDCSTGEQTLALELL 1209
Query: 195 SWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVLNWVEEWQRLPYISP 254
SWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVLNWVEEWQRLPYISP
Sbjct: 1210 SWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVLNWVEEWQRLPYISP 1269
Query: 255 YENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKAIVHHP 314
YENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKAIVHHP
Sbjct: 1270 YENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKAIVHHP 1329
Query: 315 GIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPRIILASSRD 374
GIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPRIILASSRD
Sbjct: 1330 GIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPRIILASSRD 1389
Query: 375 KRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNNAFHE 425
KRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNNAFHE
Sbjct: 1390 KRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNNAFHE 1439
BLAST of Carg00018 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 204.5 bits (519), Expect = 2.3e-51
Identity = 134/374 (35.83%), Postives = 205/374 (54.81%), Query Frame = 0
Query: 12 LCQTRAFVDAKVKWVRDPYLDFV--VQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQ 71
L Q R +VD +KW RDPY D + + R L+ V+SLKN IV P + +P+S++S +
Sbjct: 18 LTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTR 77
Query: 72 NLKVPTTSISKFLQLYPSVFIQF-QPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDV 131
V +T I+ FL+ +PS+F +F P L P +LT +A L ++E ++ Q DD+
Sbjct: 78 QFDV-STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVY--QTSADDL 137
Query: 132 VKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR--DCSTGE 191
RL KL++++ LPL +++ ++W LGLP ++ +P+ S R D G
Sbjct: 138 RDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-----QFPDMNLDSSFRFVDMEDGV 197
Query: 192 QTLALELLSWREDLSV---SELKKRH---SLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 251
+ LA++ + LSV + +KKR SLE I FP+ +G L K+
Sbjct: 198 KGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLE---------EIEFPLFPSKGCRLRVKIE 257
Query: 252 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 311
+W+ E+Q+LPY+SPY++ L P+SD AEK LHELL L V E++ + CL ++
Sbjct: 258 DWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHF 317
Query: 312 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 371
G + KA HP IFY+S K +T T +LRE Y VE H ++G+R +YI LM +
Sbjct: 318 GLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNS- 367
Query: 372 RRPRPRIILASSRD 375
+IL S R+
Sbjct: 378 -----ELILKSRRN 367
BLAST of Carg00018 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 3.4e-34
Identity = 107/339 (31.56%), Postives = 175/339 (51.62%), Query Frame = 0
Query: 21 AKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQNLKVP-TTSIS 80
A VK ++ D V+QR+K L+ V+ L+N++V+ P + + L + R++L + +
Sbjct: 53 AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112
Query: 81 KFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDVVKRLAKLLMLT 140
L+ +P VF + + +LT A L+ +E + N V +L KLLM++
Sbjct: 113 ALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNES--EGLAVAKLRKLLMMS 172
Query: 141 GAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVRDCSTGEQTLALELLSWRED 200
++ + + L+ DLGLP +F T+ YP+YF+V + ++ ALEL W +
Sbjct: 173 QEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM------DRGPALELTHWDPE 232
Query: 201 LSVS--ELKKRHSLEGNGWRRNGIHIAFPMSF-----PRGFDLEKKVLNWVEEWQRLPYI 260
L+VS EL + S RN I I P+ F P+G L + + ++ +PYI
Sbjct: 233 LAVSAAELAEEESRAREAEERNLI-IDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYI 292
Query: 261 SPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKAIVH 320
SPY + HL SD+ EK V+HE+L L V K+T +++ E F + I+
Sbjct: 293 SPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIR 352
Query: 321 HPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQ 352
HP +FYVS K +V LREAY + LVEK+ L+ ++ +
Sbjct: 353 HPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK 381
BLAST of Carg00018 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 142.1 bits (357), Expect = 1.4e-32
Identity = 117/383 (30.55%), Postives = 193/383 (50.39%), Query Frame = 0
Query: 8 APHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLM 67
AP RL A VK ++ D V+QR+K L+ V+ L+N++VS+P + + L +
Sbjct: 49 APRRLA---VVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRF 108
Query: 68 RQNLKVP-TTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHNSQPHRD 127
R++L + + L+ +P VF + + +LT A L+ +E +H
Sbjct: 109 RRDLGLTRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDE--LHLKNESEG 168
Query: 128 DVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVRDCSTGE 187
V +L KLLM++ ++ + I L+ DLGLP +F T+ YP+YF+V + +
Sbjct: 169 LAVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM------D 228
Query: 188 QTLALELLSWREDLSVS--ELKKRHSLEGNGWRRNGIHIAFPMSF-----PRGFDLEKKV 247
+ LEL W +L+VS E+ + + RN I I P+ F P+G L +
Sbjct: 229 RGPGLELTHWDPELAVSAAEVAEEENRAREEQERNLI-IDRPLKFNRVKLPQGLKLSRGE 288
Query: 248 LNWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEY 307
V +++ +PYISPY + HL S + EK V+HE+L L + K+T +++ E
Sbjct: 289 ARRVAQFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREE 348
Query: 308 LGFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKA 367
F + ++ HP +FYVS K +V LREAY + LVEK L+ ++ + L+ A
Sbjct: 349 FRFSQSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV--A 408
Query: 368 VRRPRPRIILASSRDKRQNNPSA 383
V R R + A+S + + N +A
Sbjct: 409 VPRFPRRGVPATSEEADRTNGAA 416
BLAST of Carg00018 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 3.2e-32
Identity = 115/398 (28.89%), Postives = 195/398 (48.99%), Query Frame = 0
Query: 19 VDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQNLKV-PTTS 78
V A VK ++ D VVQR+K L+ V++++ ++VS P + + L + R++L +
Sbjct: 72 VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRR 131
Query: 79 ISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDVVKRLAKLLM 138
L+ YP VF + K+TS+A L+ +E I N D +V +L KL+M
Sbjct: 132 FIALLRKYPGVF-EIVEEGAYSLRFKMTSEAERLYLDEMRIRNEL--EDVLVVKLRKLVM 191
Query: 139 LTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVRDCSTGEQTLALELLSWR 198
++ ++ L I L+ DLGLP +F T+ YP+YF+V + ALEL W
Sbjct: 192 MSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPT------PRGPALELTHWD 251
Query: 199 EDLSVS--ELKKRHSLEGNGWRRNGIHIAFP----MSFPRGFDLEKKVLNWVEEWQRLPY 258
+L+VS EL + + RN I P + PRG +L K + +++ + Y
Sbjct: 252 PELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQY 311
Query: 259 ISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKAIV 318
ISPY++ HL + + EK V+HELL L K+T +++ E F + + ++
Sbjct: 312 ISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLI 371
Query: 319 HHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPRIILAS 378
HP +FYVS K +V LREAY + L++K L + + + R +++
Sbjct: 372 RHPDLFYVSLKGERDSVFLREAYRNSELIDKDPL-------------TLVKEKMRALVSV 431
Query: 379 SRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDD 410
R R+ P ++E + + +++ S+ + EE D
Sbjct: 432 PRFPRRGGPRKDEEGR---EVEIDGSDADGEEEEEESD 444
BLAST of Carg00018 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 1.6e-28
Identity = 104/363 (28.65%), Postives = 177/363 (48.76%), Query Frame = 0
Query: 26 VRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLM--RQNLKVPTTSISKFLQ 85
VRD D ++ EK +R+V+ +LI+S P ++ +S + + R L FL
Sbjct: 47 VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106
Query: 86 LYPSVFIQFQPSLGLHPHVKLTSQAL-ALHKEESTIHNSQPHRDDVVKRLAKLLMLTGAG 145
+P VF ++ + + +LT +AL + E + + P D V RL KL+M++ G
Sbjct: 107 KFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIP---DAVTRLRKLVMMSNTG 166
Query: 146 KLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVRDCSTGEQT--LALELLSWREDL 205
++ L + + + GLP F +++ +P++F++ GE+T +E++ +L
Sbjct: 167 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLID------GEETRDKYIEIVEKDPNL 226
Query: 206 SVSELKKRHSLE--GNGWRRNGIHIAFPMSFPRGFDLEKKVLNWVEEWQRLPYISPYENA 265
S+ +++ +E G + +F ++FP GF + K V +WQRLPY SPYE+
Sbjct: 227 SICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDI 286
Query: 266 FHLAPNSDQA----EKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKAIVHHP 325
S +A EK + A +HELL L V KK E I + + K+ ++ H
Sbjct: 287 SGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQ 346
Query: 326 GIFYVS---NKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPRIILAS 375
GIFY+S N + TV LRE Y + LVE + + R + L+ + R+ + L
Sbjct: 347 GIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVR 400
BLAST of Carg00018 vs. ExPASy TrEMBL
Match:
A0A6J1FNW3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 SV=1)
HSP 1 Score: 849.0 bits (2192), Expect = 8.7e-243
Identity = 421/424 (99.29%), Postives = 422/424 (99.53%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQRE+NLRQVISLKNLIVSSPFKSVP
Sbjct: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN
Sbjct: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENI CLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYI LMNKAV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNKAV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN
Sbjct: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
Query: 421 AFHE 425
AFHE
Sbjct: 421 AFHE 424
BLAST of Carg00018 vs. ExPASy TrEMBL
Match:
A0A6J1K6G9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV=1)
HSP 1 Score: 835.1 bits (2156), Expect = 1.3e-238
Identity = 413/424 (97.41%), Postives = 416/424 (98.11%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MIL VTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP
Sbjct: 1 MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSLMRQNLK PTTSISKF QLYPSVFIQFQPSLGLHPHVKLTSQ+LALHKEE TIHN
Sbjct: 61 LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDD+VKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIP LLADYPEYFQVCS+R
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNG HIAFPMSFPRGFDLEKKVL
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDHPCRVTELQNN 420
RRPRPRIILASSR KRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDD PCRVTELQNN
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDDRPCRVTELQNN 420
Query: 421 AFHE 425
AFHE
Sbjct: 421 AFHE 424
BLAST of Carg00018 vs. ExPASy TrEMBL
Match:
A0A6J1C3P8 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111008095 PE=4 SV=1)
HSP 1 Score: 681.8 bits (1758), Expect = 1.8e-192
Identity = 335/391 (85.68%), Postives = 358/391 (91.56%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MIL TR P+RL QTR FVDAKVKWVRDPYLDF VQREKNLRQVISLKNLIVS+P KS+P
Sbjct: 1 MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSL++QNLKVPTT++SKF QLYPSVF QFQPS GLHP VKLT QAL LHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
SQPHRDDVVKRLAKLLMLTGAG+LPLYVIE+LQWDLGLPYKFIPTLLADYPEYFQVC+VR
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DCSTGEQTLALE+LSWR++LS+SELK+R +GN W R G HIAFPMS P+GFD EKKV+
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQRLPYISPYENAFHLAPNSDQAEKWT AVLHELLYL+VSKKTEKENIFCLGEYL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKA+VHHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQYIHLMNK V
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKEPKRNAK 392
RRPRP IILASSR KRQNNP +NKE + K
Sbjct: 361 RRPRPGIILASSRGKRQNNPYSNKEAQGRMK 391
BLAST of Carg00018 vs. ExPASy TrEMBL
Match:
A0A5A7T0U1 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00230 PE=4 SV=1)
HSP 1 Score: 669.5 bits (1726), Expect = 9.5e-189
Identity = 327/385 (84.94%), Postives = 353/385 (91.69%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MIL +TR PHR Q RAFVDAKVKWVRDPYLDF VQREKNL+QVISLKN+I+SSP SVP
Sbjct: 1 MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVK+TSQAL LHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
S+PHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPY+FIPTLLADYP+YFQVCSV+
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DC TGEQTLALELLSWR+DL+VSELKKR LEGN R IAFPMSFPRGFDL+KKV+
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQ LPYISPYENAFHLAPNSDQAEKW AVLHELLYL +SKKTEKENI+CLG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAY K+FL+EKH LMGMRHQY+HLMNK +
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKE 386
R+PRP IILASSR KR+N ANKE
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKE 385
BLAST of Carg00018 vs. ExPASy TrEMBL
Match:
A0A1S3C4Q9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4 SV=1)
HSP 1 Score: 669.5 bits (1726), Expect = 9.5e-189
Identity = 327/385 (84.94%), Postives = 353/385 (91.69%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
MIL +TR PHR Q RAFVDAKVKWVRDPYLDF VQREKNL+QVISLKN+I+SSP SVP
Sbjct: 1 MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSSVSL++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVK+TSQAL LHKEESTIHN
Sbjct: 61 LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
S+PHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPY+FIPTLLADYP+YFQVCSV+
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
DC TGEQTLALELLSWR+DL+VSELKKR LEGN R IAFPMSFPRGFDL+KKV+
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVEEWQ LPYISPYENAFHLAPNSDQAEKW AVLHELLYL +SKKTEKENI+CLG+YL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAY K+FL+EKH LMGMRHQY+HLMNK +
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360
Query: 361 RRPRPRIILASSRDKRQNNPSANKE 386
R+PRP IILASSR KR+N ANKE
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKE 385
BLAST of Carg00018 vs. TAIR 10
Match:
AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 442.6 bits (1137), Expect = 3.6e-124
Identity = 223/377 (59.15%), Postives = 282/377 (74.80%), Query Frame = 0
Query: 1 MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60
M T+ L Q R FV+A+VKWV D YLD VQREKNL+QVISLK+ IVSSP KS+P
Sbjct: 1 MAAATTKLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLP 60
Query: 61 LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120
LSS+SL++ + + T+ + F Q YPSVF FQPS HV+LT QAL LHKEE TIH
Sbjct: 61 LSSLSLLKPLVNLHITA-AAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHL 120
Query: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180
S P R+ V+RL K LMLTGAG LPLYV+++ ++DLGLP +I +L+ DYPEYF+V ++
Sbjct: 121 SPPQRNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIK 180
Query: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240
D TGE+TLAL + S R +L VSE+++R + + G+ I + M+FP+G++L K+V
Sbjct: 181 DRLTGEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVK 240
Query: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300
NWVE+WQ LPYISPYENAFHL SDQAEKW AVLHELL+L+VSKKTE +N+ CLGEYL
Sbjct: 241 NWVEQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYL 300
Query: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360
GFG RFKKA+VHHPGIFY+S+KIRTQTVVLREAY+K FL+EKH LMG+RHQYI+LM+K+
Sbjct: 301 GFGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSG 360
Query: 361 RRPRPRIILASSRDKRQ 378
R + + R R+
Sbjct: 361 RGKKRDYVHGVERSNRK 376
BLAST of Carg00018 vs. TAIR 10
Match:
AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 312.4 bits (799), Expect = 5.6e-85
Identity = 165/403 (40.94%), Postives = 252/403 (62.53%), Query Frame = 0
Query: 10 HRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQ 69
HR + V+ K+VRD LD V+REKNLR ++S+K+LI S P KSVP+S ++ +
Sbjct: 16 HRTFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKD 75
Query: 70 NLKVPTTSISKFLQLYPSVFIQFQP-SLGLHPHVKLTSQALALHKEESTIHNSQPHRDDV 129
+L+VP I +F++ +PSVF +F P +G+HPH+ LT + L +E ++ S+ ++ +
Sbjct: 76 SLRVPLRPI-EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGL 135
Query: 130 VKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQV--CSVRDCSTGE 189
RL KLLM+ K+PL +++ L+WDLGLP ++ T++ ++P+YF+V +R CS GE
Sbjct: 136 ADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCS-GE 195
Query: 190 QTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVLNWVEEW 249
LEL+ W + +VS L+K+ G G IAFPM F GF ++KK+ W+++W
Sbjct: 196 ----LELVCWSNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDW 255
Query: 250 QRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRF 309
Q+LPYISPYENA HL+ SD+++KW AVLHE++ L VSKK EK+ I LGE++G SRF
Sbjct: 256 QKLPYISPYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRF 315
Query: 310 KKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPR 369
K+ + +HPGIFY+S+K+RT TVVLR+ Y + L+E + L+ R++Y+ LMN
Sbjct: 316 KRVLHNHPGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTV------- 375
Query: 370 IILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEEDD 410
+++N + + K+ K K+E E DD
Sbjct: 376 ---------KKDNKAVSSSSKKEDKGKVEGEVCDTDAKAENDD 396
BLAST of Carg00018 vs. TAIR 10
Match:
AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 245.4 bits (625), Expect = 8.5e-65
Identity = 156/417 (37.41%), Postives = 233/417 (55.88%), Query Frame = 0
Query: 14 QTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQNLKV 73
Q V+ K+KWV+D LD VV REK+LR V +L ++I +SP +P+ + R L +
Sbjct: 28 QRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGL 87
Query: 74 P-TTSISKFLQLYPSVFIQ--FQPSLGLH-PHVKLTSQALALHKEESTIHNSQPHRDDVV 133
P +S F++ YP++F++ + S G P LT + + L+ EE + S+ + DV+
Sbjct: 88 PQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDV--SRVNERDVL 147
Query: 134 KRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVRDCSTGEQTL 193
RL KLLMLT L L+ I+ L+WDLGLPY + +L+ +P+ F + + G
Sbjct: 148 VRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG---- 207
Query: 194 ALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVLNWVEEWQRL 253
L+L+ W E L+VS+++ R + GN R +AFP+ F RGF L++K + W++EWQRL
Sbjct: 208 -LKLIHWDEHLAVSQMQLREDV-GNDER-----MAFPVKFTRGFGLKRKSIEWLQEWQRL 267
Query: 254 PYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYLGFGSRFKKA 313
PY SPY +A HL P +D +EK V HELL+L + KKTE++N+ L + +F K
Sbjct: 268 PYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKV 327
Query: 314 IVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAVRRPRPRIIL 373
HPGIFY+S K TQTV+LREAY++ L+EKH L+ +R ++ ++MN+ L
Sbjct: 328 FERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEG--------FL 387
Query: 374 ASSRDKRQNNPSANKEPKRNAKAKL----EESNVYFQPSVEEDDHPCRVTELQNNAF 423
SR Q + A+ E K N K +E + D C V E F
Sbjct: 388 DRSRGLYQKSVEADLE-KNNIKTSYPVWSDEEEELDNNLISGYDSDCPVVEEHKRVF 422
BLAST of Carg00018 vs. TAIR 10
Match:
AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 209.1 bits (531), Expect = 6.7e-54
Identity = 141/419 (33.65%), Postives = 226/419 (53.94%), Query Frame = 0
Query: 2 ILGVTRAPHRLCQTR---AFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKS 61
+ V++ H+ Q R A ++KWV++ LD V+ E +L+ LK+ I SP
Sbjct: 9 LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGF 68
Query: 62 VPLSSVSLMRQNLKVPTTSISKFLQLYPSVFIQF-QPSLGLHPHVKLTSQALALHKEEST 121
+ SV+ ++ L + T + +FL+ YP++F +F P KLT AL L +E
Sbjct: 69 LTAKSVADWQKLLGL-TVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128
Query: 122 IHNSQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVC 181
IH Q H D V+RL ++LM+ + + L + L++DLGLP + TL+ YP++F C
Sbjct: 129 IH--QSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188
Query: 182 SVRDCSTGEQTLALELLSWREDLSVSELKKRH-----SLEGNGWR---RNGIHIAFPMSF 241
V+ S G L+L+ WR++ + S L+KR+ S E + +R R + FPMSF
Sbjct: 189 FVK-ASNGNP--CLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSF 248
Query: 242 PRGFDLEKKVLNWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTE 301
PRG+ +KKV W++E+Q+LPYISPY++ ++ P SD EK AVLHELL L + KKT+
Sbjct: 249 PRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTK 308
Query: 302 KENIFCLGEYLGFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMR 361
+ + + L +F + +PGIFY+S K +T TV+L+E Y + LV+ H L +R
Sbjct: 309 RNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLR 368
Query: 362 HQYIHLMNKAVRRPRPRIILASSRDKRQNNPSANKEPKRNAKAKLEESNVYFQPSVEED 409
++ H+M + + S + + P + E + + EE + +EED
Sbjct: 369 DKFYHVMRTGFLYRARGLGMVSKEELLLDRPEDDLEEEGS-----EEEEIVEGSELEED 414
BLAST of Carg00018 vs. TAIR 10
Match:
AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 204.5 bits (519), Expect = 1.7e-52
Identity = 134/374 (35.83%), Postives = 205/374 (54.81%), Query Frame = 0
Query: 12 LCQTRAFVDAKVKWVRDPYLDFV--VQREKNLRQVISLKNLIVSSPFKSVPLSSVSLMRQ 71
L Q R +VD +KW RDPY D + + R L+ V+SLKN IV P + +P+S++S +
Sbjct: 18 LTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTR 77
Query: 72 NLKVPTTSISKFLQLYPSVFIQF-QPSLGLHPHVKLTSQALALHKEESTIHNSQPHRDDV 131
V +T I+ FL+ +PS+F +F P L P +LT +A L ++E ++ Q DD+
Sbjct: 78 QFDV-STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVY--QTSADDL 137
Query: 132 VKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR--DCSTGE 191
RL KL++++ LPL +++ ++W LGLP ++ +P+ S R D G
Sbjct: 138 RDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-----QFPDMNLDSSFRFVDMEDGV 197
Query: 192 QTLALELLSWREDLSV---SELKKRH---SLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 251
+ LA++ + LSV + +KKR SLE I FP+ +G L K+
Sbjct: 198 KGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLE---------EIEFPLFPSKGCRLRVKIE 257
Query: 252 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 311
+W+ E+Q+LPY+SPY++ L P+SD AEK LHELL L V E++ + CL ++
Sbjct: 258 DWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHF 317
Query: 312 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 371
G + KA HP IFY+S K +T T +LRE Y VE H ++G+R +YI LM +
Sbjct: 318 GLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNS- 367
Query: 372 RRPRPRIILASSRD 375
+IL S R+
Sbjct: 378 -----ELILKSRRN 367
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031364.1 | 8.6e-245 | 100.00 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... | [more] |
XP_022941952.1 | 1.8e-242 | 99.29 | protein WHAT'S THIS FACTOR 1 [Cucurbita moschata] | [more] |
XP_023536124.1 | 1.6e-238 | 97.88 | protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo] | [more] |
XP_022994938.1 | 2.7e-238 | 97.41 | protein WHAT'S THIS FACTOR 1 [Cucurbita maxima] | [more] |
KAG6600724.1 | 2.8e-235 | 99.76 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1, partial ... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUZ6 | 2.3e-51 | 35.83 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
B6TTV8 | 3.4e-34 | 31.56 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
Q65XL5 | 1.4e-32 | 30.55 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
A0MFS5 | 3.2e-32 | 28.89 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q689D6 | 1.6e-28 | 28.65 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FNW3 | 8.7e-243 | 99.29 | protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 ... | [more] |
A0A6J1K6G9 | 1.3e-238 | 97.41 | protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV... | [more] |
A0A6J1C3P8 | 1.8e-192 | 85.68 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110080... | [more] |
A0A5A7T0U1 | 9.5e-189 | 84.94 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3C4Q9 | 9.5e-189 | 84.94 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
AT4G24320.1 | 3.6e-124 | 59.15 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G71850.1 | 5.6e-85 | 40.94 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G48040.1 | 8.5e-65 | 37.41 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT3G58520.1 | 6.7e-54 | 33.65 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT2G39120.1 | 1.7e-52 | 35.83 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |