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Carg00015 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGTGGAAAGTGTGAGCTGGGTTGGCTACTTTATTAAATATTGCTTTGAGAAAAATAGATGTCTTGTTTTTTGATGACAGGTTAACCATGGAATTGGAAGTTTTGGATGCAAACTATCCTTCATAGCCTAAACCAATACTTTAGAAGCTCTTAAGAAACCGATTAGTTTATAGCCAGATGGTTCGCTTCATTTTCGATATCGCGACATCAGAATAATCGACCGCTATCACAGAGGAGGATCTTGGACATCTTCTTCATTTTCTCTTGGCTTCTGTAAGTGCTAGAATTTTGTTTATTATACTGTTCTTGTGCCTCTGCCTTGGAAATGGGATTCTAATAAGAATGCTGAGAAACTCAGTTTCTTTTCAGGGATATGGATCATCAGCTATACATTCTTATGTAGAAGCCATTTTTATCAGCTTCATTTTTGCTCCAAGCTTTTAGTTGAGGAAGAGATAAGCCACCATCTCAAAGTTAAAGGTATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTATGTTTCGACTCGGGTTGTTTACCTTTACAGTTTGTGTTTCTTGGCTTGTGGGGCTTAGATTACCAACCTTTGATATTATTTAACTCGTTACTGCTTTCCCTTTCCCATAAACAAGTGTTTCAGTGGCTTAGGCTTTAAACTACATCATATCCTATATCAATTCCCCTTCCCCTTGAACAGATTTGTTTAGAGACCTGTAGGTGAAAACAATTTGAAGCATACCACTTTTTAGAATATGAGATATCTGTTCCCAGTCCTTGACTCGTAGTAGATAAAGTCACCTTGAGACGTTTCTCTAACGAAAATGGGCATTTCGATTGGTTTCGAGAAAAACAATCATAATTAACTCTTCTAAAATTTCGTTAACTCTTCATAGAACTCTTTGTACGTGCGTCGAAAAACACTCGCAATATCCTAACTAGTTTTGTTTCTGCTATTTTTTCTTGTCATCTTCAAGAACATTATCTTTTATCAGAACAGTGACAAGACACAGACATCAACACAAACCAGTACCAATCATAACACAATACATGCTTTTCTTTCAAGGACAAGACATTGCATTGGACATAGGAGATGATATGTTTTTGTTCTGTGGCAGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGAAACAAAGATGATATTTCTTGCCTCCATTGGAAGCAGCTGCTGCATTTAGGAAAACTGCCAGCTTTGCTTCTTCTCAGAATAATAATTCTTGTGCTCCTTCTTCACCCACTGGGAGATTTGCTCAAATGCTTGTTCTTTTTCAGTTTCTGATCTGTAAATTGATTATAAAAGAATGGCACAAGTTCTTCCACGATTTCAAGGTGTAAGTAGATATCACTTCACTTCCTCACTACAGTGAGAAGGTGCTTTAAAATTCAACATTTTGAAAGGAAAGTGTTTCTGTATAAGCTCTCATATATGGCTACAAACACAAGGAACATTTAAAATCTCTACTTATCCACAGAAGACCTGAAAATGTTATG TAAAGTGGAAAGTGTGAGCTGGGTTGGCTACTTTATTAAATATTGCTTTGAGAAAAATAGATGTCTTGTTTTTTGATGACAGGTTAACCATGGAATTGGAAGTTTTGGATGCAAACTATCCTTCATAGCCTAAACCAATACTTTAGAAGCTCTTAAGAAACCGATTAGTTTATAGCCAGATGGTTCGCTTCATTTTCGATATCGCGACATCAGAATAATCGACCGCTATCACAGAGGAGGATCTTGGACATCTTCTTCATTTTCTCTTGGCTTCTTTTCTTTTCAGGGATATGGATCATCAGCTATACATTCTTATGTAGAAGCCATTTTTATCAGCTTCATTTTTGCTCCAAGCTTTTAGTTGAGGAAGAGATAAGCCACCATCTCAAAGTTAAAGGTATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGAAACAAAGATGATATTTCTTGCCTCCATTGGAAGCAGCTGCTGCATTTAGGAAAACTGCCAGCTTTGCTTCTTCTCAGAATAATAATTCTTGTGCTCCTTCTTCACCCACTGGGAGATTTGCTCAAATGCTTGTTCTTTTTCAGTTTCTGATCTGTAAATTGATTATAAAAGAATGGCACAAGTTCTTCCACGATTTCAAGGTGTAAGTAGATATCACTTCACTTCCTCACTACAGTGAGAAGGTGCTTTAAAATTCAACATTTTGAAAGGAAAGTGTTTCTGTATAAGCTCTCATATATGGCTACAAACACAAGGAACATTTAAAATCTCTACTTATCCACAGAAGACCTGAAAATGTTATG ATGAGTGAGATTGGTTCTGAAAGATCAAAGTCATGGAACATATACACAACTCCAGACCAGAGCCCATCATCTCAAACAGGCATTGGTCAAGAAGCTCCTTGGAAGAACTTTGGATCCTCCATGAATGCCATTTCCTTTGGCTTTGTTGCTACTGCAATCTTGATATCCATGTTCCTTATCATGGCCATCTTTGAGCATCTTTTTAGACCAACTTCTTCTTTCTCCTCCTCTGGTGAAGTGACCAACAACTTTGCACAATCGGGTCCGGTCGAGAAATTCGCTAGTCCAAATACGGTGCCAACATCATATGCAGCTGATTTCTCAGTGTTGATGCCAGGTCAGCACATCCCCACCTTCATTGCCCAGCCAGCCCCTCTGCCATGCCAAAGAGAGGGGACTTATTGGCCATCTCACGACCATAATTTTTCAGGCCCTTGA MSEIGSERSKSWNIYTTPDQSPSSQTGIGQEAPWKNFGSSMNAISFGFVATAILISMFLIMAIFEHLFRPTSSFSSSGEVTNNFAQSGPVEKFASPNTVPTSYAADFSVLMPGQHIPTFIAQPAPLPCQREGTYWPSHDHNFSGP Homology
BLAST of Carg00015 vs. NCBI nr
Match: XP_022983836.1 (uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983844.1 uncharacterized protein LOC111482330 [Cucurbita maxima] >XP_022983852.1 uncharacterized protein LOC111482330 [Cucurbita maxima] >KAG7031361.1 hypothetical protein SDJN02_05401 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 295.4 bits (755), Expect = 2.6e-76 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Carg00015 vs. NCBI nr
Match: KAG6600722.1 (hypothetical protein SDJN03_05955, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 295.4 bits (755), Expect = 2.6e-76 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Carg00015 vs. NCBI nr
Match: XP_023540824.1 (uncharacterized protein LOC111801082 [Cucurbita pepo subsp. pepo] >XP_023540834.1 uncharacterized protein LOC111801082 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of Carg00015 vs. NCBI nr
Match: XP_022942533.1 (uncharacterized protein LOC111447541 [Cucurbita moschata] >XP_022942534.1 uncharacterized protein LOC111447541 [Cucurbita moschata]) HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of Carg00015 vs. NCBI nr
Match: XP_004133716.1 (uncharacterized protein LOC101206733 isoform X1 [Cucumis sativus] >KGN56252.1 hypothetical protein Csa_010216 [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68 Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of Carg00015 vs. ExPASy TrEMBL
Match: A0A6J1J0H1 (uncharacterized protein LOC111482330 OS=Cucurbita maxima OX=3661 GN=LOC111482330 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Carg00015 vs. ExPASy TrEMBL
Match: A0A6J1FV27 (uncharacterized protein LOC111447541 OS=Cucurbita moschata OX=3662 GN=LOC111447541 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of Carg00015 vs. ExPASy TrEMBL
Match: A0A0A0L6N7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110010 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 9.7e-69 Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of Carg00015 vs. ExPASy TrEMBL
Match: A0A1S4DZ08 (uncharacterized protein LOC103493322 OS=Cucumis melo OX=3656 GN=LOC103493322 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of Carg00015 vs. ExPASy TrEMBL
Match: A0A5D3BTG7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00690 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 132/145 (91.03%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of Carg00015 vs. TAIR 10
Match: AT1G09812.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58007.2); Has 93 Blast hits to 93 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 116.7 bits (291), Expect = 1.6e-26 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 0
BLAST of Carg00015 vs. TAIR 10
Match: AT1G58007.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 91 Blast hits to 91 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 104.4 bits (259), Expect = 8.0e-23 Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 0
BLAST of Carg00015 vs. TAIR 10
Match: AT1G58007.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 104.4 bits (259), Expect = 8.0e-23 Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 0
BLAST of Carg00015 vs. TAIR 10
Match: AT1G11120.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 95.5 bits (236), Expect = 3.7e-20 Identity = 60/124 (48.39%), Postives = 72/124 (58.06%), Query Frame = 0
BLAST of Carg00015 vs. TAIR 10
Match: AT1G11120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 8.6e-17 Identity = 63/150 (42.00%), Postives = 75/150 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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