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Carg00003 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTGCTGTGGATCTCGTAAGTGAATATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAGTAAGTTCGAAACTATGCTTTCTTAATATATATATATATATATATATATATATATAGCTGAATTCCTCGAGATGGTTGGACTTGACCTTCATTTCACTTTCGAATTTTTTGATTATGAATTGATTATGCTGTATGCTTTCAAGAAAGAAAAAGAAAATCTTAGCTTGAACTCCGGGTTTCCCCTCTTGCATTTGCACACCCATTTTAATGATGAATTCAAGTCACCTCCATTCAATGAAGGGTTGAATAATTTACTATCTCATTCAGTTTTATACCGATGGAATTGAAATGATGATCCTAGAGCTATAATTAGTTGAACCGTGTTAAGTAGGTGGTTCGGTGCAGTGAGCTTACTTCTGTGAAATTGCTGTAGGAACTAAAATTTATCAACAAACTAGCAAGAGAATCTCTATAGATTTTTCCTTGGTGATCATTGGTAAAATAAGTTCAAATTACATGATGATCACCTATTAAGTTATTAAAAGTCTTTTGGGTTTCTTAACAACCAAATGTCGTAGAGTTAGAGGTAGAGTTAAAGGTTGAAAGCTGGTCTAAACATTTGCGAGTTAGAAGGGAAAAAGGTTAGAGAATTTTCCAGTAGTTTACTAAAGCCCAAAGTTCCTTACTATTATGTGATTTTGTTATCGGAAACCAGTTTTTAAAAACTATTATTTTCCTGCTCTTCTCTTTCCATCACTTGTACAGATTATTGAGGAGTTTCAAAAGTGTCATCTAGACCATCCCATCGGAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAGTGAGTTTTCTGTTCTATATTCTAGTTTTCCTTCGTTTCTTTTGAAGGCCTGCTCCTTTTCCCATCTCAAATGACACTTTCTATTTCTGTTCACAGAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGA GTTGCTGTGGATCTCATTATTGAGGAGTTTCAAAAGTGTCATCTAGACCATCCCATCGGAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGA GTTGCTGTGGATCTCATTATTGAGGAGTTTCAAAAGTGTCATCTAGACCATCCCATCGGAAAATTTTTGGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAGCAGAGTAAAAAAATGAAGGAAAGGCTAGATGCTTTAAGAAAGGAAAACGCTTTATGA VAVDLIIEEFQKCHLDHPIGKFLGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL Homology
BLAST of Carg00003 vs. NCBI nr
Match: KAG7031350.1 (hypothetical protein SDJN02_05390, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.7 bits (343), Expect = 7.3e-29 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Carg00003 vs. NCBI nr
Match: XP_022942557.1 (COX assembly mitochondrial protein 2 homolog [Cucurbita moschata]) HSP 1 Score: 127.9 bits (320), Expect = 3.4e-26 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Carg00003 vs. NCBI nr
Match: XP_022984448.1 (COX assembly mitochondrial protein 2 homolog [Cucurbita maxima] >XP_023539121.1 COX assembly mitochondrial protein 2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.6 bits (314), Expect = 1.7e-25 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg00003 vs. NCBI nr
Match: XP_004133729.1 (COX assembly mitochondrial protein 2 homolog [Cucumis sativus] >XP_011650575.1 COX assembly mitochondrial protein 2 homolog [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 4.9e-25 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg00003 vs. NCBI nr
Match: KGN56273.1 (hypothetical protein Csa_009541 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 4.9e-25 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg00003 vs. ExPASy TrEMBL
Match: A0A6J1FQL3 (COX assembly mitochondrial protein OS=Cucurbita moschata OX=3662 GN=LOC111447555 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Carg00003 vs. ExPASy TrEMBL
Match: A0A6J1JAI2 (COX assembly mitochondrial protein OS=Cucurbita maxima OX=3661 GN=LOC111482746 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 8.2e-26 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg00003 vs. ExPASy TrEMBL
Match: A0A0A0L3C5 (COX assembly mitochondrial protein OS=Cucumis sativus OX=3659 GN=Csa_3G110700 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.4e-25 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg00003 vs. ExPASy TrEMBL
Match: A0A1S3BTB7 (COX assembly mitochondrial protein OS=Cucumis melo OX=3656 GN=LOC103493308 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25 Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of Carg00003 vs. ExPASy TrEMBL
Match: A0A6J1C4A0 (COX assembly mitochondrial protein OS=Momordica charantia OX=3673 GN=LOC111008138 PE=3 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23 Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0
BLAST of Carg00003 vs. TAIR 10
Match: AT4G21192.1 (Cytochrome c oxidase biogenesis protein Cmc1-like ) HSP 1 Score: 109.4 bits (272), Expect = 1.2e-24 Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 0
BLAST of Carg00003 vs. TAIR 10
Match: AT4G21192.2 (Cytochrome c oxidase biogenesis protein Cmc1-like ) HSP 1 Score: 109.4 bits (272), Expect = 1.2e-24 Identity = 50/60 (83.33%), Postives = 57/60 (95.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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