Homology
BLAST of Carg00002 vs. NCBI nr
Match:
KAG7031349.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1276.9 bits (3303), Expect = 0.0e+00
Identity = 648/648 (100.00%), Postives = 648/648 (100.00%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA
Sbjct: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA
Sbjct: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 648
BLAST of Carg00002 vs. NCBI nr
Match:
KAG6600710.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 645/648 (99.54%), Postives = 646/648 (99.69%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLC EGALAASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCKEGALAASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQ PQFRGSYGPSA
Sbjct: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQVPQFRGSYGPSA 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPP+MAGQAVA
Sbjct: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPRMAGQAVA 648
BLAST of Carg00002 vs. NCBI nr
Match:
XP_023546091.1 (pentatricopeptide repeat-containing protein At1g10270-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 641/648 (98.92%), Postives = 643/648 (99.23%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
+GK KEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 KGKAKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGAL ASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEFVKEVFVKAGRNEEIE LLMMNRGGHAPYRPTSGPPRISQSQ PQFRGSYGPSA
Sbjct: 541 TPSLQEFVKEVFVKAGRNEEIERLLMMNRGGHAPYRPTSGPPRISQSQVPQFRGSYGPSA 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNY QSGSVQMTRPQQPSSGPPPSME+QQQHSQPPQMAGQAVA
Sbjct: 601 PQMTGPNYFQSGSVQMTRPQQPSSGPPPSMEKQQQHSQPPQMAGQAVA 648
BLAST of Carg00002 vs. NCBI nr
Match:
XP_022942918.1 (pentatricopeptide repeat-containing protein At1g10270-like [Cucurbita moschata])
HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 642/648 (99.07%), Postives = 642/648 (99.07%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSR LSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRPLSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGAL ASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEFVKEVF KAGRNEEIE LLMMNRGGHAPYRPTSGPPRISQSQ PQFRGSYGPSA
Sbjct: 541 TPSLQEFVKEVFEKAGRNEEIERLLMMNRGGHAPYRPTSGPPRISQSQVPQFRGSYGPSA 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNYIQSGSVQMTRPQQPSS PPPSMEEQQQHSQPPQMAGQAVA
Sbjct: 601 PQMTGPNYIQSGSVQMTRPQQPSSDPPPSMEEQQQHSQPPQMAGQAVA 648
BLAST of Carg00002 vs. NCBI nr
Match:
XP_022988649.1 (pentatricopeptide repeat-containing protein At1g10270-like [Cucurbita maxima])
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 631/648 (97.38%), Postives = 635/648 (97.99%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQ+LQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQNLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPP QRDPN+PRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPTQRDPNSPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMGD 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AE+FFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AESFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGAL ASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEF KEVFVKAGRNEEIE LLMMNRGGHAPYR SG PRISQSQ P RGSYGPS+
Sbjct: 541 TPSLQEFFKEVFVKAGRNEEIERLLMMNRGGHAPYRSPSGSPRISQSQVPHVRGSYGPSS 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNY QSGSVQMTRPQQPSS PPPSMEEQQQHSQPPQMAGQAVA
Sbjct: 601 PQMTGPNYFQSGSVQMTRPQQPSSDPPPSMEEQQQHSQPPQMAGQAVA 648
BLAST of Carg00002 vs. ExPASy Swiss-Prot
Match:
Q9SY69 (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=1 SV=1)
HSP 1 Score: 734.2 bits (1894), Expect = 1.3e-210
Identity = 385/616 (62.50%), Postives = 465/616 (75.49%), Query Frame = 0
Query: 53 RSFAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-NYPPPQRDPNAPRLPDSTSALVGPR 112
R+ AFSSAEEAAAERRRRKRRLRIEPPLHALRRD + PPP+RDPNAPRLPDSTSALVG R
Sbjct: 86 RTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQR 145
Query: 113 LSLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQF 172
L+LHNRVQSLIRA DLDAAS +AR SVFSNTRPTVFTCNAIIAAMYRAKRY ++I+LFQ+
Sbjct: 146 LNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQY 205
Query: 173 FFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDS 232
FF QSNIVPNVVSYN +INAHCDEG VD LE+YRHI+ANAPF+PS+VTYRHLTKGL+ +
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 233 GRIGEAVDLLREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVN 292
GRIG+A LLREML+KG ADS VYNNLI G+L+L + +KA E FDELK +C VYDG+VN
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325
Query: 293 ATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLD 352
ATFM+++F +G +KEAMESY+SLLD++F+M P T NVLLEV LK GKK EAW LF++MLD
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 353 NHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVR 412
NH PPN +VNSDT IMVNECFK+G+FSEA+ TF+KVG++ S+PF MD GY NI+ R
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 413 FCEHGMMEDAETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVV 472
FCE GM+ +AE FFAE S+SL D P+HR +I+AYLK E+IDD +K+ +RMVDV LRVV
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVV 505
Query: 473 ASFGNRVFGELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLD 532
A FG RVFGELIKNGK E A++LTKMGER+PKPDP+ YDVV+RGLC+ AL ++ ++
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVG 565
Query: 533 QVMRYGIGLTPSLQEFVKEVFVKAGRNEEIEGLL------MMNRGGH------------- 592
+++R+ +G+T L+EF+ EVF KAGR EEIE +L + N G
Sbjct: 566 EMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVARPVRNAGQSGNTPPRVPAVFGT 625
Query: 593 ---APYRPTSGPPRISQSQAPQFRGSYGPSAPQMTGPNYIQSGSVQMTRPQQPSSGPPPS 646
AP +P P SQ G +A Q G G+ + Q PS +
Sbjct: 626 TPAAPQQPRDRAPWTSQGVVHSNSGWANGTAGQTAG------GAYKANNGQNPSWS--NT 685
BLAST of Carg00002 vs. ExPASy Swiss-Prot
Match:
Q9M3A8 (Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1796 PE=1 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 5.1e-90
Identity = 206/555 (37.12%), Postives = 312/555 (56.22%), Query Frame = 0
Query: 23 ALSIGPLSQHLQTPILPSSQSSSLI--SLLHARSFAFSSAEEAAAERRRRKRRLRIEPPL 82
++S HLQT L S ++ L R +F++ EEAAAERRRRKRRLR+EPP+
Sbjct: 2 SISKAAFLNHLQT--LSRSYRHRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEPPV 61
Query: 83 HALRR-----DNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQSLIRAGDLDAASAVAR 142
++ R P P ++PN P+LP+S SALVG RL LHN + LIR DL+ A+ R
Sbjct: 62 NSFNRSQQQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAALYTR 121
Query: 143 HSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVPNVVSYNNLINAHCDE 202
HSV+SN RPT+FT N ++AA R +YG A+ F NQ+ I PN+++YN + A+ D
Sbjct: 122 HSVYSNCRPTIFTVNTVLAAQLRQAKYG-ALLQLHGFINQAGIAPNIITYNLIFQAYLDV 181
Query: 203 GRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLV 262
+ ++ LE Y+ I NAP +PS T+R L KGL+ + + +A+++ +M KG D +V
Sbjct: 182 RKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVV 241
Query: 263 YNNLISGFLNLENLEKANELFDELKERC--LVYDGVVNATFMDWFFNRGKEKEAMESYKS 322
Y+ L+ G + + + +L+ ELKE+ V DGVV M +F + EKEAME Y+
Sbjct: 242 YSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE 301
Query: 323 LL--DRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVN 382
+ + + +M N +LE L ++GK EA LFD + H PP AVN TFN+MVN
Sbjct: 302 AVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVN 361
Query: 383 ECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSK 442
GKF EA+E FR++G K P D +NN++ + C++ ++ +AE + E+ K
Sbjct: 362 GYCAGGKFEEAMEVFRQMG-DFKCSP---DTLSFNNLMNQLCDNELLAEAEKLYGEMEEK 421
Query: 443 SLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFGELIKNGKAVEC 502
++ PD T+ L++ K +ID+ + MV+ LR + NR+ +LIK GK +
Sbjct: 422 NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 481
Query: 503 AQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYG-IGLTPSLQEFVKE 562
M + K D Y ++R L G L ++D+++ + ++ LQEFVKE
Sbjct: 482 KSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKE 541
Query: 563 VFVKAGRNEEIEGLL 566
K GR ++E L+
Sbjct: 542 ELRKGGREGDLEKLM 548
BLAST of Carg00002 vs. ExPASy Swiss-Prot
Match:
Q9LEX6 (Pentatricopeptide repeat-containing protein At3g60960, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60960 PE=2 SV=2)
HSP 1 Score: 234.6 bits (597), Expect = 3.2e-60
Identity = 152/402 (37.81%), Postives = 223/402 (55.47%), Query Frame = 0
Query: 90 PPQRDPNA-PRL-PDSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSV---FSNTRP 149
P RDP++ P+L P S S + +SL RV+++I +LD AS ++R +V F R
Sbjct: 27 PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 86
Query: 150 TVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEI 209
TVF CN++I AM AKRY DAI+LF +FFN+S +PN +S + +I AHCD+G VD LE+
Sbjct: 87 TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 146
Query: 210 YRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNNLISGFL 269
YRHI+ + +P TY L K L+D+ R EA L R M +VY+ LI GFL
Sbjct: 147 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSM----SCCSFMVYDILIRGFL 206
Query: 270 NLENLEKANELFDELKERCLVYDG--------VVNATFMDWFFNRGKEKEAMESYKSLLD 329
++ N KA+++F+ELK G + N +FM+++F +GK++EAME +L D
Sbjct: 207 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 266
Query: 330 RQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKL 389
Q + P N +L+VL+KHGKKTEAW LF +M+ + +S+T +IM
Sbjct: 267 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEMI--------EICDSETVDIMSE----- 326
Query: 390 GKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSK----- 449
FSE F + + Y +IV CEHG + DAE FAE+ +
Sbjct: 327 -YFSEKTVPFER-----------LRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGGD 386
Query: 450 -SLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVA 473
+ PD+ R +I Y+ + ++DD +K N+M LR +A
Sbjct: 387 LLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLRKLA 398
BLAST of Carg00002 vs. ExPASy Swiss-Prot
Match:
Q9LEX5 (Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60980 PE=2 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.3e-58
Identity = 147/380 (38.68%), Postives = 218/380 (57.37%), Query Frame = 0
Query: 117 RVQSLIR-AGDLDAASAVARHSVFSN--TRPTVFTCNAIIAAMYRAKRYGDAIALFQFFF 176
RV LIR GDLD A+ AR +VF++ + T C +II M R KR DA L++FFF
Sbjct: 38 RVSYLIRCVGDLDTAAKYARLAVFTSIKSESTTTICQSIIGGMLRDKRLKDAYDLYEFFF 97
Query: 177 NQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFS--PSAVTYRHLTKGLIDS 236
NQ N+ PN +N +I + +G V+ L + I + PS ++R LTKGL+ S
Sbjct: 98 NQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVHDYPSDDSFRILTKGLVHS 157
Query: 237 GRIGEAVDLLR-EMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLV----- 296
GR+ +A LR +N+ D + YNNLI GFL+L N +KAN + E K L+
Sbjct: 158 GRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSET 217
Query: 297 --------YDGVV---NATFMDWFFNRGKEKEAMESY-KSLLDRQFKMIPATCNVLLEVL 356
Y+ V ATFM+++F +GK+ EAME Y + +L + + T N LL+VL
Sbjct: 218 KDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVLSNRLLVCAETGNALLKVL 277
Query: 357 LKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQP 416
LK+G+K AW L+ ++LD + ++SDT IMV+ECF +G FSEA+ET++K +P
Sbjct: 278 LKYGEKKNAWALYHELLDKNGTGK-GCLDSDTIKIMVDECFDMGWFSEAMETYKK--ARP 337
Query: 417 KSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSKSLS-PDVPTHRTLIEAYLKLEQ 473
K+ D II RFCE+ M+ +AE+ F + + DV T++T+I+AY+K +
Sbjct: 338 KN-----DYLSDKYIITRFCENRMLSEAESVFVDSLADDFGYIDVNTYKTMIDAYVKAGR 397
BLAST of Carg00002 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 6.1e-35
Identity = 103/431 (23.90%), Postives = 192/431 (44.55%), Query Frame = 0
Query: 125 GDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVPNVVS 184
G + A A+ V RP + T + +I + R +A+ L + P+ V+
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV-EYGFQPDEVT 213
Query: 185 YNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDLLREM 244
Y ++N C G + L+++R + S V Y + L G +A+ L EM
Sbjct: 214 YGPVLNRLCKSGNSALALDLFRK-MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 273
Query: 245 LNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFNRGKE 304
KG AD + Y++LI G N + ++ E+ R ++ D V + +D F GK
Sbjct: 274 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 333
Query: 305 KEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQAVNSD 364
EA E Y ++ R T N L++ K EA +FD M+ P+
Sbjct: 334 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV----- 393
Query: 365 TFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMEDAETF 424
T++I++N K + + + FR++ S+ + YN +++ FC+ G + A+
Sbjct: 394 TYSILINSYCKAKRVDDGMRLFREI----SSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 453
Query: 425 FAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFGELIK 484
F E+ S+ + P V T+ L++ +++ L++F +M + + N + +
Sbjct: 454 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 513
Query: 485 NGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGLTPSL 544
K + + + ++ KPD Y+V+I GLC +G+L+ + ML ++ G TP
Sbjct: 514 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE--DGCTP-- 569
Query: 545 QEFVKEVFVKA 556
+F + ++A
Sbjct: 574 DDFTYNILIRA 569
BLAST of Carg00002 vs. ExPASy TrEMBL
Match:
A0A6J1FVY7 (pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita moschata OX=3662 GN=LOC111447803 PE=4 SV=1)
HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 642/648 (99.07%), Postives = 642/648 (99.07%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSR LSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRPLSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGAL ASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEFVKEVF KAGRNEEIE LLMMNRGGHAPYRPTSGPPRISQSQ PQFRGSYGPSA
Sbjct: 541 TPSLQEFVKEVFEKAGRNEEIERLLMMNRGGHAPYRPTSGPPRISQSQVPQFRGSYGPSA 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNYIQSGSVQMTRPQQPSS PPPSMEEQQQHSQPPQMAGQAVA
Sbjct: 601 PQMTGPNYIQSGSVQMTRPQQPSSDPPPSMEEQQQHSQPPQMAGQAVA 648
BLAST of Carg00002 vs. ExPASy TrEMBL
Match:
A0A6J1JM59 (pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita maxima OX=3661 GN=LOC111485902 PE=4 SV=1)
HSP 1 Score: 1238.4 bits (3203), Expect = 0.0e+00
Identity = 631/648 (97.38%), Postives = 635/648 (97.99%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQ+LQTPILPSSQSSSLISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQNLQTPILPSSQSSSLISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPP QRDPN+PRLPDSTSALVGPRLSLHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPTQRDPNSPRLPDSTSALVGPRLSLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMGD 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AE+FFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AESFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGAL ASRMLLDQVMRYGIGL
Sbjct: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRMLLDQVMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQAPQFRGSYGPSA 600
TPSLQEF KEVFVKAGRNEEIE LLMMNRGGHAPYR SG PRISQSQ P RGSYGPS+
Sbjct: 541 TPSLQEFFKEVFVKAGRNEEIERLLMMNRGGHAPYRSPSGSPRISQSQVPHVRGSYGPSS 600
Query: 601 PQMTGPNYIQSGSVQMTRPQQPSSGPPPSMEEQQQHSQPPQMAGQAVA 649
PQMTGPNY QSGSVQMTRPQQPSS PPPSMEEQQQHSQPPQMAGQAVA
Sbjct: 601 PQMTGPNYFQSGSVQMTRPQQPSSDPPPSMEEQQQHSQPPQMAGQAVA 648
BLAST of Carg00002 vs. ExPASy TrEMBL
Match:
A0A6J1JBF6 (pentatricopeptide repeat-containing protein At1g10270-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482933 PE=4 SV=1)
HSP 1 Score: 1148.7 bits (2970), Expect = 0.0e+00
Identity = 599/708 (84.60%), Postives = 614/708 (86.72%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRS RR+STSPSHS++LSIGPL+ HL +PI PSSQSSS ISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSFRRSSTSPSHSQSLSIGPLNHHLLSPIPPSSQSSSPISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRL+LHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRY DAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDV LEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVSLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCE GMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLK+EQIDD L+VFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGK V+CAQILTKMGERDPKPDPTCYDVVI+GLCNEGAL ASR LLDQ+MRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIQGLCNEGALDASRELLDQIMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQA----------- 600
TP+LQEFVKE FVKAGR+EEIE LL MNR GHAPYRP SGPPRISQSQ
Sbjct: 541 TPALQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600
Query: 601 -------------------------------------------------PQFRGSYGPSA 649
PQ GSYGPS+
Sbjct: 601 QGHPPMAEPHWRPSINPQARGSYAPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYGPSS 660
BLAST of Carg00002 vs. ExPASy TrEMBL
Match:
A0A6J1J312 (pentatricopeptide repeat-containing protein At1g10270-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482933 PE=4 SV=1)
HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 599/741 (80.84%), Postives = 614/741 (82.86%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRS RR+STSPSHS++LSIGPL+ HL +PI PSSQSSS ISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSFRRSSTSPSHSQSLSIGPLNHHLLSPIPPSSQSSSPISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRL+LHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRY DAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDV LEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVSLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCE GMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMAD 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLK+EQIDD L+VFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGK V+CAQILTKMGERDPKPDPTCYDVVI+GLCNEGAL ASR LLDQ+MRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIQGLCNEGALDASRELLDQIMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQA----------- 600
TP+LQEFVKE FVKAGR+EEIE LL MNR GHAPYRP SGPPRISQSQ
Sbjct: 541 TPALQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRPPSGPPRISQSQVPPQMGPPRPPP 600
Query: 601 ------------------------------------------------------------ 649
Sbjct: 601 QGHPPMAEPHWQPSINPQAGGSCAPSSPQMTGPQGHPPMAEPHWRPSINPQARGSYAPSS 660
BLAST of Carg00002 vs. ExPASy TrEMBL
Match:
A0A6J1EMZ6 (pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita moschata OX=3662 GN=LOC111436060 PE=4 SV=1)
HSP 1 Score: 1129.0 bits (2919), Expect = 0.0e+00
Identity = 598/741 (80.70%), Postives = 611/741 (82.46%), Query Frame = 0
Query: 1 MSLYRLLLRSLRRTSTSPSHSRALSIGPLSQHLQTPILPSSQSSSLISLLHARSFAFSSA 60
MSLYRLLLRS RR+STSPSHS+ALSIGPL+ HL +P PSSQSS ISLLHARSFAFSSA
Sbjct: 1 MSLYRLLLRSFRRSSTSPSHSQALSIGPLNHHLLSPFPPSSQSSP-ISLLHARSFAFSSA 60
Query: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQS 120
EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRL+LHNRVQS
Sbjct: 61 EEAAAERRRRKRRLRIEPPLHALRRDNYPPPQRDPNAPRLPDSTSALVGPRLNLHNRVQS 120
Query: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVP 180
LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRY DAIALFQFFFNQSNIVP
Sbjct: 121 LIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYSDAIALFQFFFNQSNIVP 180
Query: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL
Sbjct: 181 NVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDL 240
Query: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN
Sbjct: 241 LREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVNATFMDWFFN 300
Query: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA
Sbjct: 301 RGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQA 360
Query: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMED 420
VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNII RFCE GMM D
Sbjct: 361 VNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIGRFCEQGMMGD 420
Query: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFG 480
AETFFAELCSKSLSPDVPTHRTLIEAYLK+EQIDD L+VFNRMVDVGLRVVASFGNRVFG
Sbjct: 421 AETFFAELCSKSLSPDVPTHRTLIEAYLKIEQIDDALRVFNRMVDVGLRVVASFGNRVFG 480
Query: 481 ELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYGIGL 540
ELIKNGK V+CAQILTKMGERDPKPDPTCYDVVIRGLCNEGAL ASR LLDQ+MRYGIGL
Sbjct: 481 ELIKNGKVVDCAQILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGL 540
Query: 541 TPSLQEFVKEVFVKAGRNEEIEGLLMMNRGGHAPYRPTSGPPRISQSQA----------- 600
TP+LQEFVKE FVKAGR+EEIE LL MNR GHAPYR SGPPRISQSQ
Sbjct: 541 TPTLQEFVKEAFVKAGRSEEIERLLNMNRWGHAPYRSPSGPPRISQSQVPPQMGPPHPPP 600
Query: 601 ------------------------------------------------------------ 649
Sbjct: 601 QGHPPMAEPHWRPSINPQAGGSYGPSSPQMTGPQGHPPMAEPHWRPSINPQAGGSYAPSS 660
BLAST of Carg00002 vs. TAIR 10
Match:
AT1G10270.1 (glutamine-rich protein 23 )
HSP 1 Score: 734.2 bits (1894), Expect = 9.2e-212
Identity = 385/616 (62.50%), Postives = 465/616 (75.49%), Query Frame = 0
Query: 53 RSFAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-NYPPPQRDPNAPRLPDSTSALVGPR 112
R+ AFSSAEEAAAERRRRKRRLRIEPPLHALRRD + PPP+RDPNAPRLPDSTSALVG R
Sbjct: 86 RTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRDPSAPPPKRDPNAPRLPDSTSALVGQR 145
Query: 113 LSLHNRVQSLIRAGDLDAASAVARHSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQF 172
L+LHNRVQSLIRA DLDAAS +AR SVFSNTRPTVFTCNAIIAAMYRAKRY ++I+LFQ+
Sbjct: 146 LNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQY 205
Query: 173 FFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDS 232
FF QSNIVPNVVSYN +INAHCDEG VD LE+YRHI+ANAPF+PS+VTYRHLTKGL+ +
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 233 GRIGEAVDLLREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLVYDGVVN 292
GRIG+A LLREML+KG ADS VYNNLI G+L+L + +KA E FDELK +C VYDG+VN
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325
Query: 293 ATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLD 352
ATFM+++F +G +KEAMESY+SLLD++F+M P T NVLLEV LK GKK EAW LF++MLD
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 353 NHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVR 412
NH PPN +VNSDT IMVNECFK+G+FSEA+ TF+KVG++ S+PF MD GY NI+ R
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 413 FCEHGMMEDAETFFAELCSKSLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVV 472
FCE GM+ +AE FFAE S+SL D P+HR +I+AYLK E+IDD +K+ +RMVDV LRVV
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVV 505
Query: 473 ASFGNRVFGELIKNGKAVECAQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLD 532
A FG RVFGELIKNGK E A++LTKMGER+PKPDP+ YDVV+RGLC+ AL ++ ++
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVG 565
Query: 533 QVMRYGIGLTPSLQEFVKEVFVKAGRNEEIEGLL------MMNRGGH------------- 592
+++R+ +G+T L+EF+ EVF KAGR EEIE +L + N G
Sbjct: 566 EMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVARPVRNAGQSGNTPPRVPAVFGT 625
Query: 593 ---APYRPTSGPPRISQSQAPQFRGSYGPSAPQMTGPNYIQSGSVQMTRPQQPSSGPPPS 646
AP +P P SQ G +A Q G G+ + Q PS +
Sbjct: 626 TPAAPQQPRDRAPWTSQGVVHSNSGWANGTAGQTAG------GAYKANNGQNPSWS--NT 685
BLAST of Carg00002 vs. TAIR 10
Match:
AT3G49240.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 333.6 bits (854), Expect = 3.6e-91
Identity = 206/555 (37.12%), Postives = 312/555 (56.22%), Query Frame = 0
Query: 23 ALSIGPLSQHLQTPILPSSQSSSLI--SLLHARSFAFSSAEEAAAERRRRKRRLRIEPPL 82
++S HLQT L S ++ L R +F++ EEAAAERRRRKRRLR+EPP+
Sbjct: 2 SISKAAFLNHLQT--LSRSYRHRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEPPV 61
Query: 83 HALRR-----DNYPPPQRDPNAPRLPDSTSALVGPRLSLHNRVQSLIRAGDLDAASAVAR 142
++ R P P ++PN P+LP+S SALVG RL LHN + LIR DL+ A+ R
Sbjct: 62 NSFNRSQQQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAALYTR 121
Query: 143 HSVFSNTRPTVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVPNVVSYNNLINAHCDE 202
HSV+SN RPT+FT N ++AA R +YG A+ F NQ+ I PN+++YN + A+ D
Sbjct: 122 HSVYSNCRPTIFTVNTVLAAQLRQAKYG-ALLQLHGFINQAGIAPNIITYNLIFQAYLDV 181
Query: 203 GRVDVGLEIYRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLV 262
+ ++ LE Y+ I NAP +PS T+R L KGL+ + + +A+++ +M KG D +V
Sbjct: 182 RKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVV 241
Query: 263 YNNLISGFLNLENLEKANELFDELKERC--LVYDGVVNATFMDWFFNRGKEKEAMESYKS 322
Y+ L+ G + + + +L+ ELKE+ V DGVV M +F + EKEAME Y+
Sbjct: 242 YSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE 301
Query: 323 LL--DRQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVN 382
+ + + +M N +LE L ++GK EA LFD + H PP AVN TFN+MVN
Sbjct: 302 AVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVN 361
Query: 383 ECFKLGKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSK 442
GKF EA+E FR++G K P D +NN++ + C++ ++ +AE + E+ K
Sbjct: 362 GYCAGGKFEEAMEVFRQMG-DFKCSP---DTLSFNNLMNQLCDNELLAEAEKLYGEMEEK 421
Query: 443 SLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVASFGNRVFGELIKNGKAVEC 502
++ PD T+ L++ K +ID+ + MV+ LR + NR+ +LIK GK +
Sbjct: 422 NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 481
Query: 503 AQILTKMGERDPKPDPTCYDVVIRGLCNEGALAASRMLLDQVMRYG-IGLTPSLQEFVKE 562
M + K D Y ++R L G L ++D+++ + ++ LQEFVKE
Sbjct: 482 KSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKE 541
Query: 563 VFVKAGRNEEIEGLL 566
K GR ++E L+
Sbjct: 542 ELRKGGREGDLEKLM 548
BLAST of Carg00002 vs. TAIR 10
Match:
AT3G60960.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 234.6 bits (597), Expect = 2.3e-61
Identity = 152/402 (37.81%), Postives = 223/402 (55.47%), Query Frame = 0
Query: 90 PPQRDPNA-PRL-PDSTSALVGPRLSLHNRVQSLIRAGDLDAASAVARHSV---FSNTRP 149
P RDP++ P+L P S S + +SL RV+++I +LD AS ++R +V F R
Sbjct: 27 PLGRDPSSLPKLDPVSISYIDSRPISLRYRVRAMIEMSNLDEASKLSRLAVLNGFLVDRD 86
Query: 150 TVFTCNAIIAAMYRAKRYGDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEI 209
TVF CN++I AM AKRY DAI+LF +FFN+S +PN +S + +I AHCD+G VD LE+
Sbjct: 87 TVFICNSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALEL 146
Query: 210 YRHIIANAPFSPSAVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNNLISGFL 269
YRHI+ + +P TY L K L+D+ R EA L R M +VY+ LI GFL
Sbjct: 147 YRHILLDGRVAPGIETYMILAKALVDAKRFDEACVLARSM----SCCSFMVYDILIRGFL 206
Query: 270 NLENLEKANELFDELKERCLVYDG--------VVNATFMDWFFNRGKEKEAMESYKSLLD 329
++ N KA+++F+ELK G + N +FM+++F +GK++EAME +L D
Sbjct: 207 DIGNFVKASQIFEELKGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 266
Query: 330 RQFKMIPATCNVLLEVLLKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKL 389
Q + P N +L+VL+KHGKKTEAW LF +M+ + +S+T +IM
Sbjct: 267 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEMI--------EICDSETVDIMSE----- 326
Query: 390 GKFSEAVETFRKVGTQPKSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSK----- 449
FSE F + + Y +IV CEHG + DAE FAE+ +
Sbjct: 327 -YFSEKTVPFER-----------LRKTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGGD 386
Query: 450 -SLSPDVPTHRTLIEAYLKLEQIDDVLKVFNRMVDVGLRVVA 473
+ PD+ R +I Y+ + ++DD +K N+M LR +A
Sbjct: 387 LLVGPDLLIFRAMINGYVSVGRVDDAIKTLNKMRISNLRKLA 398
BLAST of Carg00002 vs. TAIR 10
Match:
AT3G60980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 228.4 bits (581), Expect = 1.6e-59
Identity = 147/380 (38.68%), Postives = 218/380 (57.37%), Query Frame = 0
Query: 117 RVQSLIR-AGDLDAASAVARHSVFSN--TRPTVFTCNAIIAAMYRAKRYGDAIALFQFFF 176
RV LIR GDLD A+ AR +VF++ + T C +II M R KR DA L++FFF
Sbjct: 38 RVSYLIRCVGDLDTAAKYARLAVFTSIKSESTTTICQSIIGGMLRDKRLKDAYDLYEFFF 97
Query: 177 NQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFS--PSAVTYRHLTKGLIDS 236
NQ N+ PN +N +I + +G V+ L + I + PS ++R LTKGL+ S
Sbjct: 98 NQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVHDYPSDDSFRILTKGLVHS 157
Query: 237 GRIGEAVDLLR-EMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELKERCLV----- 296
GR+ +A LR +N+ D + YNNLI GFL+L N +KAN + E K L+
Sbjct: 158 GRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSET 217
Query: 297 --------YDGVV---NATFMDWFFNRGKEKEAMESY-KSLLDRQFKMIPATCNVLLEVL 356
Y+ V ATFM+++F +GK+ EAME Y + +L + + T N LL+VL
Sbjct: 218 KDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVLSNRLLVCAETGNALLKVL 277
Query: 357 LKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQP 416
LK+G+K AW L+ ++LD + ++SDT IMV+ECF +G FSEA+ET++K +P
Sbjct: 278 LKYGEKKNAWALYHELLDKNGTGK-GCLDSDTIKIMVDECFDMGWFSEAMETYKK--ARP 337
Query: 417 KSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSKSLS-PDVPTHRTLIEAYLKLEQ 473
K+ D II RFCE+ M+ +AE+ F + + DV T++T+I+AY+K +
Sbjct: 338 KN-----DYLSDKYIITRFCENRMLSEAESVFVDSLADDFGYIDVNTYKTMIDAYVKAGR 397
BLAST of Carg00002 vs. TAIR 10
Match:
AT5G28380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 185.3 bits (469), Expect = 1.6e-46
Identity = 112/322 (34.78%), Postives = 175/322 (54.35%), Query Frame = 0
Query: 162 YGDAIALFQFFFNQSNIVPNVVSYNNLINAHCDEGRVDVGLEIYRHIIANAPFSPSAVTY 221
Y +AI+LF +FFN+S +PN++S N +I AHCD+G VD LE+YRHI+ + +P TY
Sbjct: 88 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 147
Query: 222 RHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNNLISGFLNLENLEKANELFDELK- 281
R LTK L+ + R+ EA D++R M D VY+ LI GFL+ +A+++F+ELK
Sbjct: 148 RILTKALVGAKRLDEACDVVRSMSR----CDFAVYDILIRGFLDKGKFVRASQIFEELKG 207
Query: 282 -------ERCLVYDGVVNATFMDWFFNRGKEKEAMESYKSLLDRQFKMIPATCNVLLEVL 341
+ N +FMD++F +GK++EAME + +L + + + N +L+ L
Sbjct: 208 PNSKLPWRNYHKAIAIFNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVLKCL 267
Query: 342 LKHGKKTEAWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFSEAVETFRKVGTQP 401
++HG+KTEAW LF M+ + +S+T I+++ K G F E F +V
Sbjct: 268 VEHGRKTEAWELFLDMI--------EICDSETVGIIMS---KEGFFGEKTIPFERVRR-- 327
Query: 402 KSRPFAMDVAGYNNIIVRFCEHGMMEDAETFFAELCSK------SLSPDVPTHRTLIEAY 461
Y +I C+ G M +AE FA++ + PDV T R +I Y
Sbjct: 328 ---------TCYTRMIASLCQQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMINGY 382
Query: 462 LKLEQIDDVLKVFNRMVDVGLR 470
+K+ ++DD +K N+M LR
Sbjct: 388 VKVGRVDDAIKTLNKMKISNLR 382
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7031349.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6600710.1 | 0.0e+00 | 99.54 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023546091.1 | 0.0e+00 | 98.92 | pentatricopeptide repeat-containing protein At1g10270-like [Cucurbita pepo subsp... | [more] |
XP_022942918.1 | 0.0e+00 | 99.07 | pentatricopeptide repeat-containing protein At1g10270-like [Cucurbita moschata] | [more] |
XP_022988649.1 | 0.0e+00 | 97.38 | pentatricopeptide repeat-containing protein At1g10270-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9SY69 | 1.3e-210 | 62.50 | Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX... | [more] |
Q9M3A8 | 5.1e-90 | 37.12 | Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidop... | [more] |
Q9LEX6 | 3.2e-60 | 37.81 | Pentatricopeptide repeat-containing protein At3g60960, mitochondrial OS=Arabidop... | [more] |
Q9LEX5 | 2.3e-58 | 38.68 | Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidop... | [more] |
Q6NQ83 | 6.1e-35 | 23.90 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FVY7 | 0.0e+00 | 99.07 | pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita moschata... | [more] |
A0A6J1JM59 | 0.0e+00 | 97.38 | pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita maxima O... | [more] |
A0A6J1JBF6 | 0.0e+00 | 84.60 | pentatricopeptide repeat-containing protein At1g10270-like isoform X2 OS=Cucurbi... | [more] |
A0A6J1J312 | 0.0e+00 | 80.84 | pentatricopeptide repeat-containing protein At1g10270-like isoform X1 OS=Cucurbi... | [more] |
A0A6J1EMZ6 | 0.0e+00 | 80.70 | pentatricopeptide repeat-containing protein At1g10270-like OS=Cucurbita moschata... | [more] |
Match Name | E-value | Identity | Description | |
AT1G10270.1 | 9.2e-212 | 62.50 | glutamine-rich protein 23 | [more] |
AT3G49240.1 | 3.6e-91 | 37.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G60960.1 | 2.3e-61 | 37.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G60980.1 | 1.6e-59 | 38.68 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G28380.1 | 1.6e-46 | 34.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |