CaUC11G217130 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G217130
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr11: 30610650 .. 30611328 (-)
RNA-Seq Expression	CaUC11G217130
Synteny	CaUC11G217130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGCCTCCAACTCATTCGGCCCAGGGAAAATTGCAATCGAAGCAATTGAGAACCCCTTGGCTCTGGCCGGGGAAAAGTTCTCGCCCACCGTCAGCTGGACATTGGGCCCTAATTTCTCCCTCAACCCTGCGATGACCTCCAAGATCTCGCTCTTAACTTCCTCGCCCAGATTCTCCTTGAGTTTGAGGAGGGTGAGTCTAAGAGCAGAGCCAGGAGGTGCGACGACGGGGCCTTTCAAAGCATCGGCGACCCAATCGACGGCCATGATGTCGTCGCAGATGGGAAGAACAAATTGCTTGACGACGTTCATGTGGGCGGGGTGGGCGGAGTAGATGGAGAGATCCTCCTTGGAGGGGTAGCGGCTGTGAAGGAGGTGAGTGAAGGTGGAGGAGGAGGAGCGGTTGCGGAGGATGGGACCGGCGGTGAGATGGAGGACTTGGTCGAGAGAGATCAGACCATTGAGGCCGGTGAGCATGTCGTTTACCTTGGAGGAATCGAGGCCGTCTTTGACCTTGAAGAGGACGACGTGCTCGATTGGTTGAGTGTGAGCGGCGGCGGACATGTTGACTGAGAATGGTCGGAAAGAAAGAGAAGGGTTTGGGCGGCGGAGGCGGAGGCGGAGATGCCTGGAATTGTAAGATAGCGTTGAGAATGCCCGGAGAGGAGATGAAAGCATTT

mRNA sequence

GCCGCCTCCAACTCATTCGGCCCAGGGAAAATTGCAATCGAAGCAATTGAGAACCCCTTGGCTCTGGCCGGGGAAAAGTTCTCGCCCACCGTCAGCTGGACATTGGGCCCTAATTTCTCCCTCAACCCTGCGATGACCTCCAAGATCTCGCTCTTAACTTCCTCGCCCAGATTCTCCTTGAGTTTGAGGAGGAGCAGAGCCAGGAGGTGCGACGACGGGGCCTTTCAAAGCATCGGCGACCCAATCGACGGCCATGATGTCGTCGCAGATGGGAAGAACAAATTGCTTGACGACGTTCATGTGGGCGGGGTGGGCGGAGTAGATGGAGAGATCCTCCTTGGAGGGGTAGCGGCTGTGAAGGAGGTGAGTGAAGGTGGAGGAGGAGGAGCGGTTGCGGAGGATGGGACCGGCGGTGAGATGGAGGACTTGGTCGAGAGAGATCAGACCATTGAGGCCGGTGAGCATGTCGTTTACCTTGGAGGAATCGAGGCCGTCTTTGACCTTGAAGAGGACGACGTGCTCGATTGGTTGAGTGTGAGCGGCGGCGGACATAAAGAGAAGGGTTTGGGCGGCGGAGGCGGAGGCGGAGATGCCTGGAATTGTAAGATAGCGTTGAGAATGCCCGGAGAGGAGATGAAAGCATTT

Coding sequence (CDS)

GCCGCCTCCAACTCATTCGGCCCAGGGAAAATTGCAATCGAAGCAATTGAGAACCCCTTGGCTCTGGCCGGGGAAAAGTTCTCGCCCACCGTCAGCTGGACATTGGGCCCTAATTTCTCCCTCAACCCTGCGATGACCTCCAAGATCTCGCTCTTAACTTCCTCGCCCAGATTCTCCTTGAGTTTGAGGAGGAGCAGAGCCAGGAGGTGCGACGACGGGGCCTTTCAAAGCATCGGCGACCCAATCGACGGCCATGATGTCGTCGCAGATGGGAAGAACAAATTGCTTGACGACGTTCATGTGGGCGGGGTGGGCGGAGTAGATGGAGAGATCCTCCTTGGAGGGGTAGCGGCTGTGAAGGAGGTGAGTGAAGGTGGAGGAGGAGGAGCGGTTGCGGAGGATGGGACCGGCGGTGAGATGGAGGACTTGGTCGAGAGAGATCAGACCATTGAGGCCGGTGAGCATGTCGTTTACCTTGGAGGAATCGAGGCCGTCTTTGACCTTGAAGAGGACGACGTGCTCGATTGGTTGAGTGTGAGCGGCGGCGGACATAAAGAGAAGGGTTTGGGCGGCGGAGGCGGAGGCGGAGATGCCTGGAATTGTAAGATAGCGTTGAGAATGCCCGGAGAGGAGATGAAAGCATTT

Protein sequence

AASNSFGPGKIAIEAIENPLALAGEKFSPTVSWTLGPNFSLNPAMTSKISLLTSSPRFSLSLRRSRARRCDDGAFQSIGDPIDGHDVVADGKNKLLDDVHVGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTGGEMEDLVERDQTIEAGEHVVYLGGIEAVFDLEEDDVLDWLSVSGGGHKEKGLGGGGGGGDAWNCKIALRMPGEEMKAF

Homology

[Close]

BLAST of CaUC11G217130 vs. NCBI nr
Match: PON54836.1 (hypothetical protein PanWU01x14_192020 [Parasponia andersonii])

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-14
Identity = 69/166 (41.57%), Postives = 92/166 (55.42%), Query Frame = 0


Query: 37  PNFSLNPAMTSKISLLTSSPRFSLSLRRS----RARRCDDGAFQSIGDPIDGHDVVADGK 96
           P   LNP    +       P+  L  ++S    R RR    + + IGDPIDGHDV AD +
Sbjct: 54  PEHILNPFNDPQNLRFRLFPQMLLQFQKSDPQRRTRRLGYRSLEIIGDPIDGHDVFADWE 113

Query: 97  NKLLDDVHVGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTGGEMEDLVERDQTIEA 156
           ++ LDD  +G V  V  E++L  V A+++VSE  G G+V E+ +GGE+EDLV+  Q  E 
Sbjct: 114 DRFLDDADMGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVQGFQAAEP 173

Query: 157 GEHVVYLGGIEAVFDLEEDDVLDWLS--VSGGGHKEKGLGGGGGGG 197
            +H V LG +  V DLEE+DVLD LS    GG     G  G  G G
Sbjct: 174 VDHGVDLGWVGVVSDLEENDVLDGLSHCYLGGESARVGYEGKRGFG 219

[Close]

BLAST of CaUC11G217130 vs. NCBI nr
Match: GAV92361.1 (hypothetical protein CFOL_v3_35740 [Cephalotus follicularis])

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-08
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 78  IGDPIDGHDVVADGKNKLLDDVHVGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTG 137
           I DPIDG +V+  G     D  HVG V  V   +  GGV A+K+VSE G  G+ A+D TG
Sbjct: 2   IEDPIDGQNVLTYGL-VCFDHGHVGWVDRVSCHVFFGGVVAMKQVSEAGERGSDADDWTG 61

Query: 138 GEMEDLVERDQTIEAGEHVVYLGGIEAVFDLEEDDVLD 176
           GE+ED V+RDQ +    H V    +   F+LEE DV D
Sbjct: 62  GEVEDGVKRDQAVHVVGHGVDFLEVHVGFELEEYDVFD 98

[Close]

BLAST of CaUC11G217130 vs. NCBI nr
Match: PKH99050.1 (hypothetical protein CRG98_049676, partial [Punica granatum])

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-04
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 1  AASNSFGPGKIAIEAIENPLALAGEKFSPTVSWTLGPNFSLNPAMTSKISLLTSSPRFSL 60
          AAS S  P   A +A E PLALAGEKFSP VS++     SL P +T + S LT SPR S 
Sbjct: 23 AASISAAPLNTARDATEKPLALAGEKFSPQVSYSTAVGPSLIPRITPRTSSLTESPRSSF 82

Query: 61 SLRRSRARRCDDG 74
          +LR+   R    G
Sbjct: 83 NLRKLTLRADPQG 95

[Close]

BLAST of CaUC11G217130 vs. NCBI nr
Match: PON81635.1 (hypothetical protein TorRG33x02_225890 [Trema orientale])

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-04
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 101 VGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTGGEMEDLVERDQTIEAGEHVVYLG 160
           +G V  V  E++L  V A+++VSE  G G+V E+ +GGE+EDLVE  Q +E  +H V LG
Sbjct: 1   MGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVEGFQAVEPVDHGVDLG 60

Query: 161 GIEAVFDLEEDDVLDWLS--VSGGGHKEKGLGGGGGGG 197
            +  V DLEE+DVLD LS    GG     G  G  G G
Sbjct: 61  WVGVVSDLEENDVLDGLSHCYLGGESARIGYEGKRGFG 98

[Close]

BLAST of CaUC11G217130 vs. NCBI nr
Match: PKH99048.1 (hypothetical protein CRG98_049677, partial [Punica granatum])

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-04
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 1  AASNSFGPGKIAIEAIENPLALAGEKFSPTVSWTLGPNFSLNPAMTSKISLLTSSPRFSL 60
          AAS S  P   A +  E PLALAGEKFSP VS++     SL P +T + S LT+SPR S 
Sbjct: 23 AASISAAPLNTARDVTEKPLALAGEKFSPQVSYSTAVGPSLIPRITPRTSSLTASPRSSF 82

Query: 61 SLRRSRAR 69
          +LR+   R
Sbjct: 83 NLRKLTLR 90

[Close]

BLAST of CaUC11G217130 vs. ExPASy TrEMBL
Match: A0A2P5C1E2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192020 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.0e-15
Identity = 69/166 (41.57%), Postives = 92/166 (55.42%), Query Frame = 0


Query: 37  PNFSLNPAMTSKISLLTSSPRFSLSLRRS----RARRCDDGAFQSIGDPIDGHDVVADGK 96
           P   LNP    +       P+  L  ++S    R RR    + + IGDPIDGHDV AD +
Sbjct: 54  PEHILNPFNDPQNLRFRLFPQMLLQFQKSDPQRRTRRLGYRSLEIIGDPIDGHDVFADWE 113

Query: 97  NKLLDDVHVGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTGGEMEDLVERDQTIEA 156
           ++ LDD  +G V  V  E++L  V A+++VSE  G G+V E+ +GGE+EDLV+  Q  E 
Sbjct: 114 DRFLDDADMGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVQGFQAAEP 173

Query: 157 GEHVVYLGGIEAVFDLEEDDVLDWLS--VSGGGHKEKGLGGGGGGG 197
            +H V LG +  V DLEE+DVLD LS    GG     G  G  G G
Sbjct: 174 VDHGVDLGWVGVVSDLEENDVLDGLSHCYLGGESARVGYEGKRGFG 219

[Close]

BLAST of CaUC11G217130 vs. ExPASy TrEMBL
Match: A0A1Q3DIS4 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_35740 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-08
Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 78  IGDPIDGHDVVADGKNKLLDDVHVGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTG 137
           I DPIDG +V+  G     D  HVG V  V   +  GGV A+K+VSE G  G+ A+D TG
Sbjct: 2   IEDPIDGQNVLTYGL-VCFDHGHVGWVDRVSCHVFFGGVVAMKQVSEAGERGSDADDWTG 61

Query: 138 GEMEDLVERDQTIEAGEHVVYLGGIEAVFDLEEDDVLD 176
           GE+ED V+RDQ +    H V    +   F+LEE DV D
Sbjct: 62  GEVEDGVKRDQAVHVVGHGVDFLEVHVGFELEEYDVFD 98

[Close]

BLAST of CaUC11G217130 vs. ExPASy TrEMBL
Match: A0A2I0H675 (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_049676 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.6e-05
Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 1  AASNSFGPGKIAIEAIENPLALAGEKFSPTVSWTLGPNFSLNPAMTSKISLLTSSPRFSL 60
          AAS S  P   A +A E PLALAGEKFSP VS++     SL P +T + S LT SPR S 
Sbjct: 23 AASISAAPLNTARDATEKPLALAGEKFSPQVSYSTAVGPSLIPRITPRTSSLTESPRSSF 82

Query: 61 SLRRSRARRCDDG 74
          +LR+   R    G
Sbjct: 83 NLRKLTLRADPQG 95

[Close]

BLAST of CaUC11G217130 vs. ExPASy TrEMBL
Match: A0A2P5E7X0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_225890 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.6e-05
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 101 VGGVGGVDGEILLGGVAAVKEVSEGGGGGAVAEDGTGGEMEDLVERDQTIEAGEHVVYLG 160
           +G V  V  E++L  V A+++VSE  G G+V E+ +GGE+EDLVE  Q +E  +H V LG
Sbjct: 1   MGRVLRVSVEVVLRAVPAMEQVSEVEGRGSVPEEWSGGEVEDLVEGFQAVEPVDHGVDLG 60

Query: 161 GIEAVFDLEEDDVLDWLS--VSGGGHKEKGLGGGGGGG 197
            +  V DLEE+DVLD LS    GG     G  G  G G
Sbjct: 61  WVGVVSDLEENDVLDGLSHCYLGGESARIGYEGKRGFG 98

[Close]

BLAST of CaUC11G217130 vs. ExPASy TrEMBL
Match: A0A2I0H591 (Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_049677 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 1  AASNSFGPGKIAIEAIENPLALAGEKFSPTVSWTLGPNFSLNPAMTSKISLLTSSPRFSL 60
          AAS S  P   A +  E PLALAGEKFSP VS++     SL P +T + S LT+SPR S 
Sbjct: 23 AASISAAPLNTARDVTEKPLALAGEKFSPQVSYSTAVGPSLIPRITPRTSSLTASPRSSF 82

Query: 61 SLRRSRAR 69
          +LR+   R
Sbjct: 83 NLRKLTLR 90

The following BLAST results are available for this feature:

BLAST of CaUC11G217130 vs. NCBI nr


Match Name	E-value	Identity	Description
PON54836.1	1.5e-14	41.57	hypothetical protein PanWU01x14_192020 [Parasponia andersonii]	[more]
GAV92361.1	4.5e-08	45.92	hypothetical protein CFOL_v3_35740 [Cephalotus follicularis]	[more]
PKH99050.1	1.8e-04	49.32	hypothetical protein CRG98_049676, partial [Punica granatum]	[more]
PON81635.1	1.8e-04	45.92	hypothetical protein TorRG33x02_225890 [Trema orientale]	[more]
PKH99048.1	4.0e-04	50.00	hypothetical protein CRG98_049677, partial [Punica granatum]	[more]

BLAST of CaUC11G217130 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G217130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5C1E2	7.0e-15	41.57	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192020 PE...	[more]
A0A1Q3DIS4	2.2e-08	45.92	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_35740 PE=4...	[more]
A0A2I0H675	8.6e-05	49.32	Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_049676 P...	[more]
A0A2P5E7X0	8.6e-05	45.92	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_225890 PE=4 SV...	[more]
A0A2I0H591	1.9e-04	50.00	Uncharacterized protein (Fragment) OS=Punica granatum OX=22663 GN=CRG98_049677 P...	[more]

BLAST of CaUC11G217130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G217130.1	CaUC11G217130.1	mRNA