CaUC11G216310 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G216310
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein NUCLEAR FUSION DEFECTIVE 6
Location	Ciama_Chr11: 29761103 .. 29764376 (-)
RNA-Seq Expression	CaUC11G216310
Synteny	CaUC11G216310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTGAGACTTCTCTCTTTCCTCCATTTATAATCTCATTCATCTTAGAATCATAGAATCGTTAGTTACAGAAAGAAATTCGGTTCAATTCTTTACTGTGGAATAGATTTTGACAATAGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGCGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCGTTTGTTTGTTCACACTTCATGGATTTTTTTCCCTCAAAATAATGTCGGATGTTTTTATAGATTTTAGGATCTGATCATAGTTCGGGTCTAGTTCAATGCATATGTCTTGTGGAATTCCAGTACGATTGAATTAATCGGCCTGATGCTTGCCTGTTCTACTAGAATTGCCATCACCTTTGAATTGTGACTAGAGCCATATAGGTGAAAATGATAGATGGAAAACATCACTTTGAGTTGGTGTATGAATGAAGCAAGCTGAGTGATGCAATCAACTTTAGTATTTGAAAATTTAATATAACTGATCGTATATAAGAAGTAGCCACAGTTGATTTCACAACTTTAGCATTAATCTAGGTTTTGAACAACTTAACTGTGGTAGATTACTTTTATGTGTTGACTCTTCTAATTTATCACCAAGCTTCAAAGTTGTCTCTCAAGTGATATAGTTTTCAACTAGTTGATGGTAAAGAATATTTCTGTTCTTCAATTTATGAACCCTTCAAAAAAAAAAAAAAAATTGTGATGCATATCTCAACATTAGTGTCATCATATCATTTTTATTCTATCTATTATTACCAATGTCTGATATGTGAGTGTATACCCATACTAACATATGCACATCTCAGTTATTTTCAATGGAATATCAGTTGATGCTACAATTCATAGAACTACATCTCTTAGAATTAATGGTTTTGTCATGACTCATGGGTCGTCACTTAGTAAGTTTTTGGTGGCTGGTGGGTGCACGTGTTTGGGTTATTTGGCCGGAAAGAAATCAAAGAAATGAATTGTTGAACATTTGAATACATTTTCTCCACTTACCAAAAAACTCTTGAACCATTTTTTGGTTCTTAGAGTTAGTGTAATTATTATTCGACTGGTGTTCAAGTTAATAGGAGACAGGAAAGTTTCTTTTCTGTGTGTGCGTGCAGGGCATTTAATTTTTGGCTAGTTGGGGGGTTCTCTTCATCCCTATTCAATGTAAAATACTCCTTTGAACAAGTACCTTCTTTTCTTCCTCAGATGTTGCCACATCTTATAGTGACAACAAAACTACCCGAAGAAAGTAATCCATTCGATACGTTTCGTTATTGTAAAAAAATAAACATTACTAACTTCCAATGACAAGAAGTTGGTAGCATCAAGTGGGGTAAAAATTAAAATAACCCCACTTGCACCTGAATCGTATGCTTTCTTAGGTGGCTATGATGATAATGACTCTTTGTTCATTCTCTGCTGGTTCACTGGGAAGTTTTAGGGATTGTTAATTTTGTTTTTATGGACTTGGGTGGTTCTTCCAAAAGCTGAGCTGTACTTCAGATGCTGTTAGGTTCAAAATTCAGAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTTGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTAATCAAAATTTTGGCATCTTTCTTGGCTCTTAAATTTTGGTTAGATGTCTAGTATTCTATCTCCCCCCCGTATATTTTCTTTATGATAGTTGTATGCACTAATTGAAACTTCTGCGCTTGAGAATGAGAAGAGTGTGAAAGTATGGGGCAAAGAAAATCATTTAGGGGCATTTCAGGCTTGAGTTTGGCATCTTCAAGCCTAGGTTTTAGTACGTCTAGCGGTTTAAGTCAACGGTTTGGCAAGTTGTTGGGTTGTGCCGCTTTAGAAAGCATGGATTTGGAGAAATAGTGTGAGGGGGCTTGAATAGTGGGCTATGGAGCACAGACACAAAAACGGAATATGGATACGATAGGATACAACGATATGTCAATTTCTAAAAAACTAAGATACAGATACGTCATTTAGATATATATAAATTTAACCTAAAACACTAAATATAATCCACCAAAAGGCACACTTTGAAGAAATAGGTTTCTATCGTGTGAAGAAGATGAGGGTGGTAGGACAAGGTTGAGCGTGGGTGTTGCTTAGTTGTAGTAGAAGAGTGTAGGGTTGAGGCGTGGCATGGCTTAATTGTAGTCGAAGAAATGAGTTTTTGTTCTGAAAAGAAGATTGCGGCGAGGGGGCAGGGGTCATGACTCATGACTCGTGGATTTGTTGTGAGAGCAGGGAAACGAGGAAATCTCATTTTACGGTTTATTTGTCCTTTTTTTAGTTTATTTTTCTATTGGGCTGTTAGATTGGGCTTCATAATTGAAAATTTTAAAATAGGTTGTGGGTTGAAAAAATAAAATCCAGCCCAAAAAATGCCATTGGCGTGACCCCTCCACGTATCTGGAAGGGGACACACATGTCCGAAAATTGGAAAAAAGAGACAAGATACTTCATTTCATGTATTTAACACGTATCTCTCACGTATATGGATGTATATGTTATCGATTTTCTGCACATTTTGAAGTGTTTGTGTTTCATAGAGAATGGGTTATTGTTCAAACTCGTTCGTCTCTCCAATAAAATATGGTTTTGGAAACTCCTCATCCTAAACATTGGTTAAGCTTGGGAAGCCAAAACCATGTCCCAAATGCTTCTTTACTTATTATAAGTTGTTTGAAAATGTCTTCTGAGTTCTAACATTAACTTTTGTTAATTTCATTCATGGGAGAAAGTTATGTATGCAAGTTTGTAGTTCAACATTTCAATTAGATTCATGCAAGACAAGAATTCCCTTTGATTCTGTTTTGTCTTCCCTGCAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA

mRNA sequence

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGCGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTTGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA

Coding sequence (CDS)

ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGCGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTTGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA

Protein sequence

MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLANADDSSLLYLLEACCEGSLPNIQTRLSQSRLMLNCLSSYKAWRVKIVGIFTKTKVFQCLYDGFALQEVVLCSFLFIDN

Homology

[Close]

BLAST of CaUC11G216310 vs. NCBI nr
Match: KAA0061549.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-44
Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLANADDSSLLYLLE 120
           SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQGMFCLS FLHL L NADDS LLY+LE
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSFFLHLGLVNADDSPLLYVLE 119

[Close]

BLAST of CaUC11G216310 vs. NCBI nr
Match: XP_038889658.1 (uncharacterized protein LOC120079520 [Benincasa hispida])

HSP 1 Score: 161.8 bits (408), Expect = 5.8e-36
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLK VSRLSSRLQSLAPKFNKRSS SELSPFKS CQSQPSTASTSRLPCTSRLPVELS
Sbjct: 1  MASLKTVSRLSSRLQSLAPKFNKRSSYSELSPFKSPCQSQPSTASTSRLPCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. NCBI nr
Match: XP_004139345.1 (uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical protein Csa_019508 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-34
Identity = 89/95 (93.68%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSLAPKFNKRSSSSEL  FKSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. NCBI nr
Match: XP_008458440.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-33
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. NCBI nr
Match: XP_023547330.1 (uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547332.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.1 bits (383), Expect = 4.6e-33
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSELSPFKS+CQSQPS ASTSR+ CTSRLP+ELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSL+IESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. ExPASy TrEMBL
Match: A0A5A7V7B3 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00330 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 7.3e-45
Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLANADDSSLLYLLE 120
           SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQGMFCLS FLHL L NADDS LLY+LE
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSFFLHLGLVNADDSPLLYVLE 119

[Close]

BLAST of CaUC11G216310 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 6.9e-35
Identity = 89/95 (93.68%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSLAPKFNKRSSSSEL  FKSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. ExPASy TrEMBL
Match: A0A1S3C7U8 (uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.9e-33
Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSELSPFKS CQSQPS ASTSR+ CTSRLP+ELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          SQGSLMPLHSAIAAARLISSL+IESQ WGLVPQG+
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGI 95

[Close]

BLAST of CaUC11G216310 vs. ExPASy TrEMBL
Match: A0A1S3C7Z3 (uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.9e-33
Identity = 87/98 (88.78%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSEL   KSTCQSQPS ASTSRL CTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGMFCL 99
          SQGSLMPLHSAIAAARLISSLTIESQ WGLVPQ M  +
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAI 98

[Close]

BLAST of CaUC11G216310 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLQSLAPKFNKRS--SSSELSPFKSTCQSQPSTASTSRLPCTSRLPVE 60
           MAS   + RLSS++ SL  K +K +   SS  SP KS   S PS+A TSR+  + RLPVE
Sbjct: 1   MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61  LSSQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLH 104
           LS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG    S++L+
Sbjct: 61  LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQSFSSLWLY 101

[Close]

BLAST of CaUC11G216310 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 6.0e-15
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKFNKRS--SSSELSPFKSTCQSQPSTASTSRLPCTSRLPVE 60
          MAS   + RLSS++ SL  K +K +   SS  SP KS   S PS+A TSR+  + RLPVE
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61 LSSQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          LS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG+
Sbjct: 61 LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGI 93

[Close]

BLAST of CaUC11G216310 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLQSLAPKF-NKRSSSSEL-SPFKSTCQSQPSTASTSRLPCTSRLPVE 60
          MAS + + R SSRL+SL     NK ++ S L SP KS   + PS+A++ RL  +SRLPVE
Sbjct: 1  MASSRVLGRFSSRLKSLCQNLSNKNANVSSLPSPIKS---ASPSSATSCRLNRSSRLPVE 60

Query: 61 LSSQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          LS   S++PLHSAIA++RL+SSL++ES+ WGLVPQG+
Sbjct: 61 LS---SMIPLHSAIASSRLVSSLSVESKIWGLVPQGL 91

[Close]

BLAST of CaUC11G216310 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.6e-04
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 2  ASLKAVSR-LSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELS 61
          ++L A SR L SR +++  K      ++  SPF S  QS         +P  SR+   L 
Sbjct: 7  SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQS---------IPRASRVLSALG 66

Query: 62 SQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGM 96
          S  +++PLHSA+A+ARL SS+  +S  W L+ QG+
Sbjct: 67 SVETMIPLHSAVASARLRSSIAADSSCWSLLSQGL 92

[Close]

BLAST of CaUC11G216310 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.8e-04
Identity = 35/85 (41.18%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 21 FNKRSSSSELSPFKSTCQSQPSTASTS-RLPCT-------SRLPVELSSQGSLMPLHSAI 80
          FN+ S SS  S  +ST  S  + +S   RLP         SR P EL    SL+PLHS +
Sbjct: 9  FNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPTRHFSFSRCPSELGCVQSLLPLHSTV 68

Query: 81 AAARLISSLTIESQRWGLVPQGMFC 98
          AAARL S L+  S+    + QG  C
Sbjct: 69 AAARLTSCLSTTSRSSRALSQGTLC 93

The following BLAST results are available for this feature:

BLAST of CaUC11G216310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061549.1	1.5e-44	89.92	protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protei...	[more]
XP_038889658.1	5.8e-36	94.74	uncharacterized protein LOC120079520 [Benincasa hispida]	[more]
XP_004139345.1	1.4e-34	93.68	uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical ...	[more]
XP_008458440.1	2.7e-33	91.58	PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]	[more]
XP_023547330.1	4.6e-33	88.42	uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331....	[more]

BLAST of CaUC11G216310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G216310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7B3	7.3e-45	89.92	Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LKT5	6.9e-35	93.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1	[more]
A0A1S3C7U8	1.3e-33	91.58	uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1G399	2.9e-33	88.42	uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A1S3C7Z3	4.9e-33	88.78	uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CaUC11G216310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55205.2	2.1e-15	54.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55205.1	6.0e-15	56.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13674.1	1.3e-14	54.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G39300.1	3.6e-04	36.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G17310.1	4.8e-04	41.18	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPR...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..49
None	No IPR available	PANTHER	PTHR33156:SF43	BNAANNG28360D PROTEIN	coord: 1..96
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G216310.1	CaUC11G216310.1	mRNA