
CaUC11G216060 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGCCCTTCTCTATCTCTTTCTCTTCCTTTCTTTCTCTCTCGTTTCGTTTTTTCATTTTTTTCTTTTTTTAATTTCTGCTTTTCAAACCGATATCGGGCCTCCTTATAAGAGTGAAAAAATAAAAGATCGCAAACCCTAAAAATCGACGACGAACAAGGGTTGGTTGATCCCTTATGAATCACTAGCCATTTTGCTGCATTTTTCTGTTGCCGTGAATTTGGATTCTCCCGCCAACATTACCAATCCTGTTGCTTTCACCATTTTCTTGCCTTCTTCAAGGTATGCATTCAATTTTCTTTCGTGTTGTTCTCTCTTTTTTTATGTTGCTGAGAATGTGAGCGATGTAGTGTTCATTTGGTTTCGAGAATTGGAACTTGATGTATTCTGGAAATTAGATGATGTCGCGAGATTTTTGGATTTTTATAGTTGAACTTATTCCATTTCTTTCTTTATTCTTAGTTGTATCTTTTCATTCGTCGTTCTGGAAACTGTTTATTTGTTCTCGACGCCTAGTTTCCAATTTCTAGGTTATAGTTAGACTCATAAGTCACTCTACGATTCTCGTATGGTTCTGATTTATATATATTTTTAATTTCATATGTTTGTTCTTTCTAGTAGTTTTTGTACTATTCTTTGACTTCCGAATGAATTTTTTTTTTTTCCCTTCTACTTACCTCTGCGTTCTCGGTCAATTAGTGGGGTGGGACAGAGTAGATATACAAATTGAAGTTACTGTTCTTTTAGGTAGCCTGCTTGCTGTTGGCCATTTTTTGGAGTCTTCAATCATATATAAGGACCTTTAATTATTCGGTTTAGGATTTTGCTACAGTTCAATCGTTAATTTTTTTATTTTCCATTGTCTTCAATTCATTTATGATTTTGATAGATAAAGCATCTGCAATTTGGTTCCCGTTGTTTTTAATCTTTCATTTATTAGCAGCAAAGCTTGCGTTTAAGCCACTGATTGATATACTGAAGTGTTTGATTTTGTTGTTTGAAGTTCATCATGGTAGCAACTGCTGCTACATCCGCGTTTTATCCTGTTCCTTCTTCATCTTCTGACTCTGGAGCGAAGAACACCAAAATTGGAGGTGGATCTGGGAATTTGGGGGGGATCAAGTCTAAATCTGTGTCTTCTGGAAGTCTTCAGGTGAAGACTAATGCCCAAGCCCCTTCCAAAGTAAATGGAAGCTCAACTGGTTTATCAACATCTGCAGGTGGCGTCAAGGCTGGGGATGACTTCTCATCATCTCACCCACGAACTTTTATTAATCAGCTGCCTGACTGGAGCATGCTTCTTGCTGCTATTACCACTATCTTTTTAGCAGCTGAGAAGCAATGGATGATGCTTGACTGGAAACCTAGGCGGCCTGACATGCTCATAGATCCATTTGGTTTGGGAAGGATTGTTCAGGACGGTCTTGTGTTTACCCAGAATTTCTCTATTAGATCCTATGAAATAGGTGCTGATCGAACAGCTTCTATAGAGACTTTAATGAATCATTTGCAGGTACAATTAGGTTGATGGATTCTTGTGTTTTTGCTAGTATCTATTAATTGTAATTCTATATATGCCTTATCAAATGGAGATAACTTATTCCAGTCTATGAATTTTTTTGTAGGAAACTGCCCTTAATCATGTTAAGACTGCCGGGCTACTTGGTGATGGATTTGGTTCTACGCCAGAAATGTGCAAAAAGAACCTGATATGGGTAGTTACCAAGATGCAGATTATGGTAGACCGTTACCCTACTTGGTAAATCTAAGTTCTTCCATGAAGTATACGCTTCTAAAGATGGATTCATTATAAACACTTGTGATTTTACTTGGGTGGGTGAGAACAGAACTGAATTTAATTCAATAGTTTACCTTGTTTGTCTTATCCCCTTAAGTTACTCATCTAGTATTGCCCTGTTCCTTGCAACTATTTAACCTATTCACCTTGCTTTCACCTTCCAAAACTAATTGATATAGGAAACATTGGACCTTTTTCACAGACTAAGTAAGAAGTCACTGAAGTGGCCTTTGATTTGACATTTTTCTTTATGAGGTGGAAGTTTTTAGAGCATGGCTGTGTGTCTTCTGCTTTAGCTGACTTCTGTTTCCATCTTTCATTGACTATATGTGTGAGAAATTGGAGGTTGTTGTGCTTGCAGGGGTGATACTGTTCAAGTAGACACTTGGGTCAGTGCTTCTGGAAAGAACGGCATGCGCCGTGATTGGCTCGTGTATGATTGTAAAACTGGGGACACGTTGACAAGAGCTTCCAGGTTGGTTTCTTCCCCCCTTTCTGGTGAAAGTATGGTATCATTTTTCTTCATACCTGTTGTAATTTTTTTCTCAACCCATGAATTATAAAGTTAACCAGCTGTGATTGAGCCCATGATTGAATAATTCTGGTTATAGGTGATGTAGGTTCTTGTATAACTTGTGAATTTCTTGTGTGTGTTTCATAA CAGCCCTTCTCTATCTCTTTCTCTTCCTTTCTTTCTCTCTCGTTTCGTTTTTTCATTTTTTTCTTTTTTTAATTTCTGCTTTTCAAACCGATATCGGGCCTCCTTATAAGAGTGAAAAAATAAAAGATCGCAAACCCTAAAAATCGACGACGAACAAGGGTTGGTTGATCCCTTATGAATCACTAGCCATTTTGCTGCATTTTTCTGTTGCCGTGAATTTGGATTCTCCCGCCAACATTACCAATCCTGTTGCTTTCACCATTTTCTTGCCTTCTTCAAGTTCATCATGGTAGCAACTGCTGCTACATCCGCGTTTTATCCTGTTCCTTCTTCATCTTCTGACTCTGGAGCGAAGAACACCAAAATTGGAGGTGGATCTGGGAATTTGGGGGGGATCAAGTCTAAATCTGTGTCTTCTGGAAGTCTTCAGGTGAAGACTAATGCCCAAGCCCCTTCCAAAGTAAATGGAAGCTCAACTGGTTTATCAACATCTGCAGGTGGCGTCAAGGCTGGGGATGACTTCTCATCATCTCACCCACGAACTTTTATTAATCAGCTGCCTGACTGGAGCATGCTTCTTGCTGCTATTACCACTATCTTTTTAGCAGCTGAGAAGCAATGGATGATGCTTGACTGGAAACCTAGGCGGCCTGACATGCTCATAGATCCATTTGGTTTGGGAAGGATTGTTCAGGACGGTCTTGTGTTTACCCAGAATTTCTCTATTAGATCCTATGAAATAGGTGCTGATCGAACAGCTTCTATAGAGACTTTAATGAATCATTTGCAGGAAACTGCCCTTAATCATGTTAAGACTGCCGGGCTACTTGGTGATGGATTTGGTTCTACGCCAGAAATGTGCAAAAAGAACCTGATATGGGTAGTTACCAAGATGCAGATTATGGTAGACCGTTACCCTACTTGGGGTGATACTGTTCAAGTAGACACTTGGGTCAGTGCTTCTGGAAAGAACGGCATGCGCCGTGATTGGCTCGTGTATGATTGTAAAACTGGGGACACGTTGACAAGAGCTTCCAGGTTGGTTTCTTCCCCCCTTTCTGGTGAAAGTGATGTAGGTTCTTGTATAACTTGTGAATTTCTTGTGTGTGTTTCATAA ATGGTAGCAACTGCTGCTACATCCGCGTTTTATCCTGTTCCTTCTTCATCTTCTGACTCTGGAGCGAAGAACACCAAAATTGGAGGTGGATCTGGGAATTTGGGGGGGATCAAGTCTAAATCTGTGTCTTCTGGAAGTCTTCAGGTGAAGACTAATGCCCAAGCCCCTTCCAAAGTAAATGGAAGCTCAACTGGTTTATCAACATCTGCAGGTGGCGTCAAGGCTGGGGATGACTTCTCATCATCTCACCCACGAACTTTTATTAATCAGCTGCCTGACTGGAGCATGCTTCTTGCTGCTATTACCACTATCTTTTTAGCAGCTGAGAAGCAATGGATGATGCTTGACTGGAAACCTAGGCGGCCTGACATGCTCATAGATCCATTTGGTTTGGGAAGGATTGTTCAGGACGGTCTTGTGTTTACCCAGAATTTCTCTATTAGATCCTATGAAATAGGTGCTGATCGAACAGCTTCTATAGAGACTTTAATGAATCATTTGCAGGAAACTGCCCTTAATCATGTTAAGACTGCCGGGCTACTTGGTGATGGATTTGGTTCTACGCCAGAAATGTGCAAAAAGAACCTGATATGGGTAGTTACCAAGATGCAGATTATGGTAGACCGTTACCCTACTTGGGGTGATACTGTTCAAGTAGACACTTGGGTCAGTGCTTCTGGAAAGAACGGCATGCGCCGTGATTGGCTCGTGTATGATTGTAAAACTGGGGACACGTTGACAAGAGCTTCCAGGTTGGTTTCTTCCCCCCTTTCTGGTGAAAGTGATGTAGGTTCTTGTATAACTTGTGAATTTCTTGTGTGTGTTTCATAA MVATAATSAFYPVPSSSSDSGAKNTKIGGGSGNLGGIKSKSVSSGSLQVKTNAQAPSKVNGSSTGLSTSAGGVKAGDDFSSSHPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGLGRIVQDGLVFTQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQIMVDRYPTWGDTVQVDTWVSASGKNGMRRDWLVYDCKTGDTLTRASRLVSSPLSGESDVGSCITCEFLVCVS Homology
BLAST of CaUC11G216060 vs. NCBI nr
Match: XP_038890785.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Benincasa hispida] >XP_038890786.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135 Identity = 246/252 (97.62%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of CaUC11G216060 vs. NCBI nr
Match: KAA0061575.1 (palmitoyl-acyl carrier protein thioesterase [Cucumis melo var. makuwa] >TYK10699.1 palmitoyl-acyl carrier protein thioesterase [Cucumis melo var. makuwa]) HSP 1 Score: 478.8 bits (1231), Expect = 3.2e-131 Identity = 242/250 (96.80%), Postives = 244/250 (97.60%), Query Frame = 0
BLAST of CaUC11G216060 vs. NCBI nr
Match: XP_008458039.1 (PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucumis melo] >XP_008458045.1 PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucumis melo] >XP_008458051.1 PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucumis melo] >XP_008458060.1 PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucumis melo]) HSP 1 Score: 478.8 bits (1231), Expect = 3.2e-131 Identity = 242/250 (96.80%), Postives = 244/250 (97.60%), Query Frame = 0
BLAST of CaUC11G216060 vs. NCBI nr
Match: XP_004139335.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic [Cucumis sativus] >XP_011648667.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic [Cucumis sativus] >XP_031737012.1 palmitoyl-acyl carrier protein thioesterase, chloroplastic [Cucumis sativus] >KGN60640.1 hypothetical protein Csa_019438 [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130 Identity = 241/252 (95.63%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of CaUC11G216060 vs. NCBI nr
Match: XP_022158833.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Momordica charantia]) HSP 1 Score: 476.1 bits (1224), Expect = 2.1e-130 Identity = 237/252 (94.05%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy Swiss-Prot
Match: Q9SJE2 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FATB PE=1 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.9e-103 Identity = 194/252 (76.98%), Postives = 215/252 (85.32%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy Swiss-Prot
Match: Q9SQI3 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum OX=3635 GN=FATB1 PE=1 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 8.5e-103 Identity = 192/251 (76.49%), Postives = 214/251 (85.26%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy Swiss-Prot
Match: Q39513 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana OX=36775 GN=FATB1 PE=2 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.3e-98 Identity = 181/251 (72.11%), Postives = 210/251 (83.67%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy Swiss-Prot
Match: G3ESV0 (Acyl-[acyl-carrier-protein] hydrolase FATB2, chloroplastic (Fragment) OS=Cuphea viscosissima OX=857185 GN=FATB2 PE=1 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.5e-96 Identity = 179/248 (72.18%), Postives = 207/248 (83.47%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy Swiss-Prot
Match: G3ESU9 (Acyl-[acyl-carrier-protein] hydrolase FATB1, chloroplastic OS=Cuphea viscosissima OX=857185 GN=FATB1 PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.5e-78 Identity = 156/252 (61.90%), Postives = 184/252 (73.02%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy TrEMBL
Match: A0A1S3C7I1 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC103497577 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131 Identity = 242/250 (96.80%), Postives = 244/250 (97.60%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy TrEMBL
Match: A0A5A7V6V4 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00080 PE=3 SV=1) HSP 1 Score: 478.8 bits (1231), Expect = 1.5e-131 Identity = 242/250 (96.80%), Postives = 244/250 (97.60%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy TrEMBL
Match: A0A0A0LF34 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_2G005370 PE=3 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 5.9e-131 Identity = 241/252 (95.63%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy TrEMBL
Match: A0A6J1DX70 (Acyl-[acyl-carrier-protein] hydrolase OS=Momordica charantia OX=3673 GN=LOC111025297 PE=3 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 1.0e-130 Identity = 237/252 (94.05%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of CaUC11G216060 vs. ExPASy TrEMBL
Match: A0A6J1HPN8 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111465562 PE=3 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 5.1e-127 Identity = 234/250 (93.60%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of CaUC11G216060 vs. TAIR 10
Match: AT1G08510.1 (fatty acyl-ACP thioesterases B ) HSP 1 Score: 376.3 bits (965), Expect = 2.1e-104 Identity = 194/252 (76.98%), Postives = 215/252 (85.32%), Query Frame = 0
BLAST of CaUC11G216060 vs. TAIR 10
Match: AT4G13050.1 (Acyl-ACP thioesterase ) HSP 1 Score: 136.0 bits (341), Expect = 4.7e-32 Identity = 56/124 (45.16%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of CaUC11G216060 vs. TAIR 10
Match: AT3G25110.1 (fatA acyl-ACP thioesterase ) HSP 1 Score: 133.3 bits (334), Expect = 3.1e-31 Identity = 55/126 (43.65%), Postives = 83/126 (65.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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