CaUC11G215710 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G215710
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Location	Ciama_Chr11: 29006961 .. 29014002 (-)
RNA-Seq Expression	CaUC11G215710
Synteny	CaUC11G215710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTCTATAAGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGTATTTTCTTCTCCAAATCAGCTATTTATGCACTTTTCTCTTTTAAAATGTGTTTATAGCCCTTTCTTTTCGCATTTTGTAGGGGTTCTTGTTGGCAATTCGGTGCCTCAGAAGGCTTTTAGGATAAATGAGGCGTTTCAAATAACAAACCCCGTTAGGCTTTTGTCTTTTCAGGTCAAGGTATGGTTTCTCTTGGCATTTCTTTCCCATTTTTTTTTTCTTTCAAATGAAATGAACTTGTTTGGTTATTGCTGTTTTGTGGATAATTTGTTGGAACTTCAGTGGACTATGGAACTGGAAATTATGGGATAGTTCAAATTCTCTACTGCTTGTCTTTGGCTAAGGGTTTAACTAGGAACATCTTAACGTATGAGTGGAATTGTTTGTTTGAATAACCATTAGCTAGGTAGATGAATATTAATTGAGTTGAAATACAGGTGTGTTAGATGAAACTGACCAAATCAAGTTGGTTTTGTTGGTTTGAACTTTGAATTATAATGGTTGGTTGGTTTGATTTCTTAAGAAAATTGGTTTTGATGTCGGTTTTGGCTTAAAAGAAATTTCAATTCGACCCGATTACACCTTTTTGTTTAACATAAGAAACCAAGCTTTTATTGAGCGAAATGAAAGAATATACAAAGTCATACAAAAGCAAACAAGCCCACAAGAATAGGAGATCCAAGGACTAGACTTCAATCCAACAAAATCAAACTAAGGTCATAATTACAAAAGGACCTTGTAACCTGATCATTGTTGAACTACATGAAGAAGAAGAACACAATTTACTCTTCTTTTTCAGTTTCTCAGAATGTGTTTAATTCTTCCTTTGGCAGGCTTCAGATGGTGCAGAGAGTAACCAAACCACAAAATACAGAAGCATAGTTTGCACCGACTGCGATGGAAATGGTATGTGTCGTCTTGATAGAAAATAGAGACCTCCATCTTTATTCCTTCAGTTAGTATGTGTTTCTTCTGTTCAAATTCCCACCATTCTGTCAAACTTTTGAATGTTACAAAATTATAAGTTATGAACTCAAGGGTGGTAACAAATGACTCGTAAGTTTGACTATGTTCGAGATTATTATGCAAAAGCTGGTAGCACTTGATTTTATATAGTCGCAGGCACATTTGATCAAACTTAGAACTTAGAAGAAAGCAAATATGTTTGGAAATATACATTGTATGTTCGCGAATTAAAGGAGTAAGAGCCAACATGAACATAATTCAACTAGCATGAACTTATACTATCAACCTCGAGGTATGAGGTTTGATTCCCCCACCCTACATATTTTAAGAAAAAATGAAGGAATAAGAATAACAATGTAAATATTTTGCAAGCTCTATGTTATGGGACAATAATATATCTATCTAAATTTAATCAGCCTAAACACGATATATTATCCAAATCCCATATCAAATTTTAGTTCCATGTATCGCATAAGAAACAATTGGAATTCAACTTAAAAGAAAAGATAACCCAACCTAAAACTTCTAAGCAATAAGAACGATAATAAAATCAAGATAAAGGAGAATATATTGGTTCACCCAATGTGGCTACATCTAGCTATCTGCTAATAATGCAAGTTTCACTTAAATGTCAAGGAGAAAAAGGTATAAGATTTCACAACTGCTCAATAATGATTTATCTTCTCATGAATCACTCTGCAAAAGCTCATAAAACCCTTTAATGGAGGTTGAAAACATTGCTGCACGCCCAAATAAAAATGCCTCTGTTCTCTCTCGTTTTCTTTTCAATCTGAAAATTACACACAGCCCCGCATGAACAAAGTTAAGAGATTAAACCAGCATTGAGTCTGAGTTTAAATATATTTTTTTTTTCTTCTCAACTTCTAGGTGCTGTCCTATGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGGTATTAATGAATAAACTCTCCTTTATTTTGTCTATCTTACTTATTACTTGTCTTCATTGTAGGAGGTTTGAATTATAAAAACATGTAAACCAAAATGGAAGTTTAGAATTGCTAGAGACAAACATTGAGATAACTTGCAAGTACTAGACTGGACAATAGTGAGTGATCAAGCTTGCATCTAATTCATACAAATACAAGTTGCACAATTTGTAAGTTTTACGATAAGGGGTGTTTGGCTCACAAACTAAGCAACTGTCACCCGAAGCTAGAAAAGTCGAGTTTACGTTATGTGGGCTTAAAGTCGCATTTCTGATGGTCCTAATGAGTCATCTACTTAACTAGAACTCTCCCCACAGTGTATAAACCATTGCATTTACAATTAGGTCAATAATATGTGGGGCAAAATTCGAAACTCGAACCTCTTGATTGTTTGAGTTGATATAAACCATTGCATCTATTATCAACTAGTTTAGTCCAATTCTAGAGAATATATTTAGAGTTCACATTGCATTCACTATAATAAGGCTATTTCAATCACAACCATTGTTCTTTTGAGATATCCAATAGAACTCCCCGAAAGATTTAACAATACAGAGTAGATTATCATCTTATTAATGATTAAATTTGAGGTTCTGAACTAGTTAATGTCTTTAACATTGCAGAGGCAAAAGGGATATCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACAGTTAGTACTTGGTATTGCAAAGTATGAGTTTTCTTTCAGCTGCATCAGAAATTGGAGTATTTTAAGTTAATTTATGGCTTATCTGAGATGAAAAAAACATATTAGTTTCAGTAAATTTTGGATAATGGGTCACATAATTCCCAAGTTTGGAATTGAAAATTATGAATGTTTTCTGCTATTTACTATTTGTTTTGTTGCATTCCCTTGAAGATTTGAGATTTTTGAGTTGTAATATATGACTAGTATATGATTTTAAGTTTCGTAATGATAACAAATTGTCAAAAGAAAAAAAAAAAAAATCTCATTTTCTTTAAATTTTAATGTTTAATAGCATTATTGAAGCCATTAGTAAAACACGAACGATGGAATTAAATTCTATATGTCACAGCTAAAGATGTTTATAGGACGAGGCGGTGGCAGAGATGGCTTTCTCGTCCCTATGCCTATTTAGGTAACAATGAAATTCATTCAAGCTCTCATTTTTCATTCAAATAGGAATTCCTCACCATTTTCACATGGTTGAATTTGATATCGACATCAACGTTTCTATTGTATGGTTAAAAAAAAAAAGATCTATGTAAGATTAAAAAAAAAAGATCAATAAGATGTGATTAATATGGTTATAATATAAATAATAAATATTTTAACTTGTTTAAAAAGTGTAAAATGCTTATTTATTGATTAATCTATATTTTTTTAATTTTTTTTATAATTGTTTAAAAAAATTTCATTCACATCAGCATTTTATCGATATTCCATTGAAATTTTCTTCGATATAGACATTCTAAATGAGTTTAGATCCTATTTGACCTTTGAATATTGAATGTTGTTCTATTCTAATCTCTAAACTTTCAAAGACTTTTGTTTTAGTCCCTAAACTTTCAAAACGTCTATTCTAGTTGTTTACATTCCTGTCATTAAGATCATGTTAATTTTGAATAAAAGGAGACATAGTCTCAATCAATGGTTAAAAGTTCATGAGTTCAATCCATGTTGGTCATCTATGAGTTTTCTTGACACCTAAATGTTGTAGAGTTAGGTCGGTGTCTCGTGACATTAGTCGAAGTGCGCGTAAGTTGGTTCGGACACTCGCAGATATAGAAAAAAGTTGAATAAGGTGGTAAAGTGATTTTTCTATAGGAGAATTTAAACGTCATTTTGGGTTGAAGATTTTGGTTGCTCGCCAAAAATGTTGCTCACTATTTTTGGCATATTACTGTAAGCCCATCAATAACTCTAGTTGCAAAAATAATTCTAAATTTTTAAGAAAAAATGTTTAAAAAGATAGTAACTTTAGGTGGATTTTGTATAATTTAACCGTAATAGATGAGGGCATCGAGGACATAAGAGTAATTGAACAACTCTCTTCCCCGTCTTCCCTTACCCGCCGCCCCGCCGTGAGTAAAGAGAGCTACGTCTTTCGATCTCCAGTATCAGTTTCCCCTTCTTCACACAAGGTACTCTCTTTCTCTCTTCTTCTTCTATTTCCAATCTTCTTTCTTCCTCCAGACGTATTCGATTTAGCGAAATTCACCGTCTTTCTTCCCTTTCCTACTGATTCAACCTAAACTGGTAAGTACTAATTCGCGCGATGTTTTCAGAAACGGACGGGTTTCAGCAATAAGAGCCTTGGACACGACGATTTTGACCCTGTGGGTTGTTAATATCTGTAAGTTTGGTCTCCATTTTTTATGTCATTAGTTTCTTCCAATTCCCAATTTGAGGGTTGTTAGTATGACATTTGTTGATGGTTTTTCTCTGGAGTTAACCTTTTGTATCCTCGATTATTAATCGCACGCGAGAGATTTCTGTTCCATCAAAATTAATTGTTTACTTGCTGAGAAAATATCTGTTCATCATTACGCGGTCGATTTAGGGTTTGGGATAAATTATAGTGAGAAGTATCTTACAGCCTTGTTGTGGTGGTCATTTTCAAATTTCATACTCTTGGTTACGAATATTGAAAATTGCGCAATGCTCACCAGCCGTTTGATGAAATTCTTTATGGGGGTGGTGTATTTGTGCTTGTTTATGCTTCTTCATTCCTCCTTAGTGTGGCTGTCACTCTCACTTTCTTAGTTTCTGTTCTTTTGGTGTGACGAACATTGAACATTGCATAGTGCTCACAAAATGTTTGATGAAATTCTACAATAAAATGGTATATTTGTTAAACTTCTCCATATCCCCTCAATGTGGCTGTCACTTCCAAACTTCTACTCCTTTGGGATGATGAGCATTGAACATTACATAGAACCCACCAAATGTTTGACGAAATTCTTCTTGTAGGTGGTATAGTTGTATTGTACATGTTCATCGTTCTTTGTTTCCCCACACCTAAAAAGTCGTCCATTGAGCATTGAAACTTTTGGTTTAGATTCAAATGGAGCTTTACTATGATTGTTCTTTTTCTGTTTGTATATCAATGTTGGTTAAATTTCTAAGTCGAGCTTTTGAACTTTCAAGTGTCTATCAATTTATGTATCTTATAGGTTCTTGAACTTTAAAAATGTTTGGTAGATCCTTGATAGATTCAAAACTTTTAAAAATTGACTGATCTATTAAATATAAAATTGAATTATATCTCTAATCAGACCACAAGCTTTCAATTTTATGTCAACTTAGTCTTGAATTTTAAAAAATGTTGAATAGGTCAAGACCTATTAGATACAAAATCGAAACTTTAGGAACTTATTTGACACAACAGTAAGATTAAGGACCTACGAACACTTTTTAAAGTACAAGGACCTATTAAATACTAAAGTGAAAGTTTAAGGACCTACAAACGGATATTTTTTAAAGAGTTCACAGACCAAATAGACACAAACTTTAGGACTAACTTTGAAATTTAACTACCAATTTTTCTCTCGAAGCTTTGATTTGTAAGTGTTAGTTATGATTTCAGATCTGTACAATGAAGAAAGGCTTGCACCCTCAAATGCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACAATGTCGGTAAAGTCTACCACTTCAGAGCAAGGCGCCAAATGGCTGAAAGTGTTGGGCAAATTGCCAGGTTCAGACGACGTTACGAGAAAGGGATTGCTGAAAATGTTGAAAATGCTGAAAAGTGAGGTTCAAGGCAGCTCAAGGATCAGCTGTTCACTTGGATGATTATGGATTCGTTTTGAGAGCATGACCTTGTGAGTGTTAGGAATTTAATTTTTCACTTCTTTCAGTGGAGTCAATCCCTTTTCATAGCATTTTATGACACTGAGTTATTTCTTATAATGGTTTAGATGTGCTTTTACCATTAGAAATATCTAATCTGCATTCCTATTTTCTGTTCAATAAATGAGATCATTTTCCACCTTTTTTTGTATCGGGAGTCTGTAGCTCTGCTTCCTTATATGCTATACTAAGAGATGTCGAGTTTTTTTGGTACTAAGCTCACCCAAAGGTTCAAATTTGAGACCTCTAAGCTGGTATGACCAAGAGACGTTAAACCATTGTGCCCCATGGGGGCATCTTACACGTTATTTATCTCATTGTCTAATCAAACTCACAGGGCTTGGTATGCTAATAAAAACCTACTAAATAGTGGAGTTGTTGACTTGGGTATACTCTAGTTGTTAGGTATTTAATGCCTCCCCTAACCCTATGAATTCTAGGTTTGAATCCCTTAAAAAAGAGTTGGGTATTCTTTTGGATAACTTTGGTGTCTTAGGGTGGACCTATTGAGGTTGGAATAATGTAGTTGGTAGTCTTAGTTGAGATAAGAAAAAGAAACTATTTATACATCGAAGTAGCGGTGAGCATAATAGTCCAAAAAATCGACCGACCGCTGGATTGTGAAAAATCCAAACCAACAAAAATTCTAAGAATAAAACTGACCAAAACCGACTGATTGATGGTTTGCACTCCTTGACGGTCGAGGTTGGTTTGATCATTTACTAACTGACCATAGTGGGTTCAGTGGCGGTTTGGTTGGAAAACTGACTCCAACTGACTGGTGCATACCCTACACTAAATGGTTTAGTTAAGCAATGACGACTACATCGAGTATTTTTTTATCAAGATGCATTGCTCATTGCTATCATGTTTGGAGCATTAGCTTAGCTTTTTAACTAATGGCTTCCATTTTTTTTCCACCATTTCCCAGTTTTCTGGAAAAAGGTCTTACGCATATGGTAAAAGTGAAGTATACATTTATACAATATTTGTTTTAGCCATTGACAAATCAGTATGGTGTTTTGTAATGCTTGATCAATTCCTTTTGAGTATTTGATTCTTTT

mRNA sequence

ATGGCTTTTTCTATAAGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCGGTGCCTCAGAAGGCTTTTAGGATAAATGAGGCGTTTCAAATAACAAACCCCGTTAGGCTTTTGTCTTTTCAGGTCAAGGCTTCAGATGGTGCAGAGAGTAACCAAACCACAAAATACAGAAGCATAGTTTGCACCGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGATATCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACACTAAAGATGTTTATAGGACGAGGCGGTGGCAGAGATGGCTTTCTCGTCCCTATGCCTATTTAGATGAGGGCATCGAGGACATAAGAGTAATTGAACAACTCTCTTCCCCGTCTTCCCTTACCCGCCGCCCCGCCGTGAGTAAAGAGAGCTACGTCTTTCGATCTCCAGTATCAGTTTCCCCTTCTTCACACAAGGTACTCTCTTTCTCTCTTCTTCTTCTATTTCCAATCTTCTTTCTTCCTCCAGACGTATTCGATTTAGCGAAATTCACCGTCTTTCTTCCCTTTCCTACTGATTCAACCTAAACTGGTAAGTACTAATTCGCGCGATGTTTTCAGAAACGGACGGGTTTCAGCAATAAGAGCCTTGGACACGACGATTTTGACCCTGTGGGTTGTTAATATCTATCTGTACAATGAAGAAAGGCTTGCACCCTCAAATGCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACAATGTCGGTAAAGTCTACCACTTCAGAGCAAGGCGCCAAATGGCTGAAAGTGTTGGGCAAATTGCCAGGTTCAGACGACGTTACGAGAAAGGGATTGCTGAAAATGTTGAAAATGCTGAAAAGTGAGGTTCAAGGCAGCTCAAGGATCAGCTGTTCACTTGGATGATTATGGATTCGTTTTGAGAGCATGACCTTGTGAGTGTTAGGAATTTAATTTTTCACTTCTTTCAGTGGAGTCAATCCCTTTTCATAGCATTTTATGACACTGAGTTATTTCTTATAATGGTTTAGATGTGCTTTTACCATTAGAAATATCTAATCTGCATTCCTATTTTCTGTTCAATAAATGAGATCATTTTCCACCTTTTTTTGTATCGGGAGTCTGTAGCTCTGCTTCCTTATATGCTATACTAAGAGATGTCGAGTTTTTTTGGTACTAAGCTCACCCAAAGGTTCAAATTTGAGACCTCTAAGCTGGTATGACCAAGAGACGTTAAACCATTGTGCCCCATGGGGGCATCTTACACGTTATTTATCTCATTGTCTAATCAAACTCACAGGGCTTGGTATGCTAATAAAAACCTACTAAATAGTGGAGTTGTTGACTTGGGTATACTCTAGTTGTTAGGTATTTAATGCCTCCCCTAACCCTATGAATTCTAGGTTTGAATCCCTTAAAAAAGAGTTGGGTATTCTTTTGGATAACTTTGGTGTCTTAGGGTGGACCTATTGAGGTTGGAATAATGTAGTTGGTAGTCTTAGTTGAGATAAGAAAAAGAAACTATTTATACATCGAAGTAGCGGTGAGCATAATAGTCCAAAAAATCGACCGACCGCTGGATTGTGAAAAATCCAAACCAACAAAAATTCTAAGAATAAAACTGACCAAAACCGACTGATTGATGGTTTGCACTCCTTGACGGTCGAGGTTGGTTTGATCATTTACTAACTGACCATAGTGGGTTCAGTGGCGGTTTGGTTGGAAAACTGACTCCAACTGACTGGTGCATACCCTACACTAAATGGTTTAGTTAAGCAATGACGACTACATCGAGTATTTTTTTATCAAGATGCATTGCTCATTGCTATCATGTTTGGAGCATTAGCTTAGCTTTTTAACTAATGGCTTCCATTTTTTTTCCACCATTTCCCAGTTTTCTGGAAAAAGGTCTTACGCATATGGTAAAAGTGAAGTATACATTTATACAATATTTGTTTTAGCCATTGACAAATCAGTATGGTGTTTTGTAATGCTTGATCAATTCCTTTTGAGTATTTGATTCTTTT

Coding sequence (CDS)

ATGGCTTTTTCTATAAGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCGGTGCCTCAGAAGGCTTTTAGGATAAATGAGGCGTTTCAAATAACAAACCCCGTTAGGCTTTTGTCTTTTCAGGTCAAGGCTTCAGATGGTGCAGAGAGTAACCAAACCACAAAATACAGAAGCATAGTTTGCACCGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAGGCAAAAGGGATATCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACACTAAAGATGTTTATAGGACGAGGCGGTGGCAGAGATGGCTTTCTCGTCCCTATGCCTATTTAGATGAGGGCATCGAGGACATAAGAGTAATTGAACAACTCTCTTCCCCGTCTTCCCTTACCCGCCGCCCCGCCGTGAGTAAAGAGAGCTACGTCTTTCGATCTCCAGTATCAGTTTCCCCTTCTTCACACAAGGTACTCTCTTTCTCTCTTCTTCTTCTATTTCCAATCTTCTTTCTTCCTCCAGACGTATTCGATTTAGCGAAATTCACCGTCTTTCTTCCCTTTCCTACTGATTCAACCTAA

Protein sequence

MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADTKDVYRTRRWQRWLSRPYAYLDEGIEDIRVIEQLSSPSSLTRRPAVSKESYVFRSPVSVSPSSHKVLSFSLLLLFPIFFLPPDVFDLAKFTVFLPFPTDST

Homology

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BLAST of CaUC11G215710 vs. NCBI nr
Match: XP_004139310.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 hypothetical protein Csa_019244 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 3.3e-68
Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MAFSI SSTPICSFNHSS PKPGVLVGNSVPQKAFRINEAFQ TN +RLLSF+VKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  ESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           +S QTTKY+SIVCTDCDGNGAV CSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADT 138
           GCNGAGFVGGFMSTAD+
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of CaUC11G215710 vs. NCBI nr
Match: XP_038889638.1 (protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-67
Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MAFS  SSTPICSFNHSSKP  GVL+GNSVPQKAFRIN+AFQ TNP+RLLSF+VKASDGA
Sbjct: 1   MAFSTCSSTPICSFNHSSKPNSGVLLGNSVPQKAFRINKAFQRTNPIRLLSFEVKASDGA 60

Query: 61  ESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           +SNQTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAG LCWLCRGKRDILCG
Sbjct: 61  DSNQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGSLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADT 138
           GCNGAGFVGGFMSTAD+
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of CaUC11G215710 vs. NCBI nr
Match: XP_008457580.1 (PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo] >KAA0061606.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa] >TYJ97816.1 chaperone protein DnaJ-like [Cucumis melo var. makuwa])

HSP 1 Score: 266.2 bits (679), Expect = 2.8e-67
Identity = 123/137 (89.78%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MAFSI SSTPICSFNHSS PKPGVLVGNSVPQKAFR+NEA Q TNP+R LSF+ KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  ESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           +S QTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADT 138
           GCNGAGFVGGFMSTAD+
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of CaUC11G215710 vs. NCBI nr
Match: KAG6586393.1 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.1 bits (632), Expect = 7.8e-62
Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MA+SI SSTPICSFN S+KP PGV VGNSVPQKAFRINEAFQ TNP +LLS +VKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  ESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
           +SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADT 138
           GGCNGAGFVGGFMSTAD+
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of CaUC11G215710 vs. NCBI nr
Match: XP_022938233.1 (uncharacterized protein LOC111444376 [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-61
Identity = 117/138 (84.78%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MA+SI SSTPICSFN S+KP PGV VGNSVPQKAFRINEAFQ TNP +LLS +VKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  ESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
            SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADT 138
           GGCNGAGFVGGFMSTAD+
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of CaUC11G215710 vs. ExPASy Swiss-Prot
Match: Q9SN73 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.7e-31
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 6   SSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGAESNQT 65
           SS    C  + S  PKP      S       + +  ++    R  SF+VKA++   + Q 
Sbjct: 9   SSPPTFCFQSPSKNPKPSHFF--STNDNTSSLVQKRELLQTSRSQSFEVKAAN--NNPQG 68

Query: 66  TKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGA 125
           TK  S+VC +C+G G V CSQCKG GVN +DHFNGQFKAG LCWLCRGK+++LCG CNGA
Sbjct: 69  TKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKEVLCGDCNGA 128

Query: 126 GFVGGFMSTAD 137
           GF+GGF+ST D
Sbjct: 129 GFIGGFLSTFD 135

[Close]

BLAST of CaUC11G215710 vs. ExPASy Swiss-Prot
Match: Q9XF14 (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.0e-29
Identity = 61/122 (50.00%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 17  SSKPKPGVLVGNSVPQK-AFRINEAFQITNPVRLLSFQVKASDGAES-NQTTKYRSIVCT 76
           ++ P P  L+  S P   +FR      ++   + L  + KA++  +S  +  K +SI+C 
Sbjct: 9   TTAPSPPALLKASAPLLISFR-----PVSRHCKNLCIKTKATENDQSAKKHQKVKSILCQ 68

Query: 77  DCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMST 136
           DC+GNGA++C++C+G GVNSVD+F G+FKAG LCWLCRGKR+ILCG CNGAGF+GGF+ST
Sbjct: 69  DCEGNGAIVCTKCEGNGVNSVDYFEGRFKAGSLCWLCRGKREILCGNCNGAGFLGGFLST 125

[Close]

BLAST of CaUC11G215710 vs. ExPASy TrEMBL
Match: A0A0A0LFZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.6e-68
Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MAFSI SSTPICSFNHSS PKPGVLVGNSVPQKAFRINEAFQ TN +RLLSF+VKASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRINEAFQKTNSIRLLSFEVKASDGA 60

Query: 61  ESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           +S QTTKY+SIVCTDCDGNGAV CSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVQCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120

Query: 121 GCNGAGFVGGFMSTADT 138
           GCNGAGFVGGFMSTAD+
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of CaUC11G215710 vs. ExPASy TrEMBL
Match: A0A5A7V544 (Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00260 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 123/137 (89.78%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MAFSI SSTPICSFNHSS PKPGVLVGNSVPQKAFR+NEA Q TNP+R LSF+ KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  ESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           +S QTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADT 138
           GCNGAGFVGGFMSTAD+
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of CaUC11G215710 vs. ExPASy TrEMBL
Match: A0A1S3C5F0 (uncharacterized protein LOC103497244 OS=Cucumis melo OX=3656 GN=LOC103497244 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67
Identity = 123/137 (89.78%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MAFSI SSTPICSFNHSS PKPGVLVGNSVPQKAFR+NEA Q TNP+R LSF+ KASDGA
Sbjct: 1   MAFSICSSTPICSFNHSSNPKPGVLVGNSVPQKAFRMNEAVQRTNPIRHLSFEAKASDGA 60

Query: 61  ESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCG 120
           +S QTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRD+LCG
Sbjct: 61  DSKQTTKYKSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDVLCG 120

Query: 121 GCNGAGFVGGFMSTADT 138
           GCNGAGFVGGFMSTAD+
Sbjct: 121 GCNGAGFVGGFMSTADS 137

[Close]

BLAST of CaUC11G215710 vs. ExPASy TrEMBL
Match: A0A6J1FIB2 (uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC111444376 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.1e-61
Identity = 117/138 (84.78%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MA+SI SSTPICSFN S+KP PGV VGNSVPQKAFRINEAFQ TNP +LLS +VKASDGA
Sbjct: 1   MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  ESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
            SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  GSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADT 138
           GGCNGAGFVGGFMSTAD+
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of CaUC11G215710 vs. ExPASy TrEMBL
Match: A0A6J1HSG2 (uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 7.2e-61
Identity = 116/138 (84.06%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAFSISSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGA 60
           MA+SI SSTPI SFN S+KP PGV VGNSVPQKAFRINEAFQ TNP +LLS +VKASDGA
Sbjct: 1   MAYSICSSTPIFSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA 60

Query: 61  ESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILC 120
           +SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFNG+FKAGGLCWLCRGKRDILC
Sbjct: 61  DSNKPTTKYKSIVCTDCDGNGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRGKRDILC 120

Query: 121 GGCNGAGFVGGFMSTADT 138
           GGCNGAGFVGGFMSTAD+
Sbjct: 121 GGCNGAGFVGGFMSTADS 138

[Close]

BLAST of CaUC11G215710 vs. TAIR 10
Match: AT3G47650.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32
Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 6   SSSTPICSFNHSSKPKPGVLVGNSVPQKAFRINEAFQITNPVRLLSFQVKASDGAESNQT 65
           SS    C  + S  PKP      S       + +  ++    R  SF+VKA++   + Q 
Sbjct: 9   SSPPTFCFQSPSKNPKPSHFF--STNDNTSSLVQKRELLQTSRSQSFEVKAAN--NNPQG 68

Query: 66  TKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGA 125
           TK  S+VC +C+G G V CSQCKG GVN +DHFNGQFKAG LCWLCRGK+++LCG CNGA
Sbjct: 69  TKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKEVLCGDCNGA 128

Query: 126 GFVGGFMSTAD 137
           GF+GGF+ST D
Sbjct: 129 GFIGGFLSTFD 135

[Close]

BLAST of CaUC11G215710 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.1e-04
Identity = 25/59 (42.37%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 73  CTDCDGNGAVLCSQCKGTG--VNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVG 130
           CT C+  GA+LCS C GTG  V+S+    G       C  C G  +I+C  C G G VG
Sbjct: 96  CTCCEAKGALLCSTCSGTGLYVDSIMESQG-IIVKVRCLGCGGSGNIMCKLCGGRGHVG 153

The following BLAST results are available for this feature:

BLAST of CaUC11G215710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139310.1	3.3e-68	91.97	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus] >KGN60678.1 h...	[more]
XP_038889638.1	1.6e-67	90.51	protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]	[more]
XP_008457580.1	2.8e-67	89.78	PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo] >KAA0061606.1 cha...	[more]
KAG6586393.1	7.8e-62	84.78	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperm...	[more]
XP_022938233.1	2.3e-61	84.78	uncharacterized protein LOC111444376 [Cucurbita moschata]	[more]

BLAST of CaUC11G215710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN73	5.7e-31	50.38	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q9XF14	7.0e-29	50.00	Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=...	[more]

BLAST of CaUC11G215710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFZ2	1.6e-68	91.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006240 PE=4 SV=1	[more]
A0A5A7V544	1.3e-67	89.78	Chaperone protein DnaJ-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C5F0	1.3e-67	89.78	uncharacterized protein LOC103497244 OS=Cucumis melo OX=3656 GN=LOC103497244 PE=...	[more]
A0A6J1FIB2	1.1e-61	84.78	uncharacterized protein LOC111444376 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A6J1HSG2	7.2e-61	84.06	uncharacterized protein LOC111465718 OS=Cucurbita maxima OX=3661 GN=LOC111465718...	[more]

BLAST of CaUC11G215710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47650.1	4.0e-32	50.38	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT5G17840.1	2.1e-04	42.37	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 1..130
None	No IPR available	PANTHER	PTHR15852:SF65	PROTEIN P13.9, PUTATIVE-RELATED	coord: 1..130
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 67..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G215710.1	CaUC11G215710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0101031	chaperone complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0044183	protein folding chaperone