CaUC11G215490 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G215490
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	MYB transcription factor
Location	Ciama_Chr11: 28741024 .. 28742036 (-)
RNA-Seq Expression	CaUC11G215490
Synteny	CaUC11G215490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGAGTAAAGCCATGAAGCAACAGCCGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGTGAACGAAATTGGGCAACCGTATCCCAGGAATCAGGTAAAAAATTTGACTCGAAAACTATCTCTAATAACTGATCTAAACGTGCAGTCTTTACTATATCGGCTACGATTCATCTTTCCTGAAACTCTATAACACACAGTGAGATGAAGATGAACGGTTTTTTATAAAAATGTTACACATATATCAGGAACTATAGTTTTCATTTATGTCGCGTGTGAGCATTCCTCCCCCATTTCTTAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTGAGATGGAAGAATTATCTCAGGCCTAATATAAAACGTGGGGGGATGTCTAAAGAGGAAGAGGATCTAATTATCCGTATGCATAAACTTTTAGGCAACAGGTCAGTTTGTATTGCATTAACCTCCATAAAGCTGAATCAATACTTACAGTAAAGAGAACGAACTTGCTGAATGTTCGGATATTTTAAAACTCTGTTATTTCTTCCATCAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACAGATAACGAGGTGAAGAACTACTGGAATACCCATTTAAACAAGAACGGCCTGCAAGACAAAAGGAAAGCTAATGACTCCAACAGCTGCAAGAAAAATGATGATGACAACCAAGATGATGGGAATAATAAGAAGCAGAAGAAAGTCATCAATGACAATGACAATGGGGCAGATTTGGCTCATGATACACGGAGAAGGAACCAGGCAGAGAACAGAGAAGTTACAGATCCTTGGAATATGGATGATATACCAAGTTCTCATTATAATATAAACTCTCCAATGGTACCTGCAAATAACGCGGCATTTAACTTTGACGACGAGCCTTACTTTGATCACCTTGATCCCTTCTTCCTATTTGAACCATTTGGATGCAGTAGTGTTGATGCATCACTGGATAACATGTAA

mRNA sequence

ATGGAGGAGAGTAAAGCCATGAAGCAACAGCCGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGTGAACGAAATTGGGCAACCGTATCCCAGGAATCAGCATTCCTCCCCCATTTCTTAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTGAGATGGAAGAATTATCTCAGGCCTAATATAAAACGTGGGGGGATGTCTAAAGAGGAAGAGGATCTAATTATCCGTATGCATAAACTTTTAGGCAACAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACAGATAACGAGGTGAAGAACTACTGGAATACCCATTTAAACAAGAACGGCCTGCAAGACAAAAGGAAAGCTAATGACTCCAACAGCTGCAAGAAAAATGATGATGACAACCAAGATGATGGGAATAATAAGAAGCAGAAGAAAGTCATCAATGACAATGACAATGGGGCAGATTTGGCTCATGATACACGGAGAAGGAACCAGGCAGAGAACAGAGAAGTTACAGATCCTTGGAATATGGATGATATACCAAGTTCTCATTATAATATAAACTCTCCAATGGTACCTGCAAATAACGCGGCATTTAACTTTGACGACGAGCCTTACTTTGATCACCTTGATCCCTTCTTCCTATTTGAACCATTTGGATGCAGTAGTGTTGATGCATCACTGGATAACATGTAA

Coding sequence (CDS)

ATGGAGGAGAGTAAAGCCATGAAGCAACAGCCGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGTGAACGAAATTGGGCAACCGTATCCCAGGAATCAGCATTCCTCCCCCATTTCTTAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTGAGATGGAAGAATTATCTCAGGCCTAATATAAAACGTGGGGGGATGTCTAAAGAGGAAGAGGATCTAATTATCCGTATGCATAAACTTTTAGGCAACAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACAGATAACGAGGTGAAGAACTACTGGAATACCCATTTAAACAAGAACGGCCTGCAAGACAAAAGGAAAGCTAATGACTCCAACAGCTGCAAGAAAAATGATGATGACAACCAAGATGATGGGAATAATAAGAAGCAGAAGAAAGTCATCAATGACAATGACAATGGGGCAGATTTGGCTCATGATACACGGAGAAGGAACCAGGCAGAGAACAGAGAAGTTACAGATCCTTGGAATATGGATGATATACCAAGTTCTCATTATAATATAAACTCTCCAATGGTACCTGCAAATAACGCGGCATTTAACTTTGACGACGAGCCTTACTTTGATCACCTTGATCCCTTCTTCCTATTTGAACCATTTGGATGCAGTAGTGTTGATGCATCACTGGATAACATGTAA

Protein sequence

MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVINDNDNGADLAHDTRRRNQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSSVDASLDNM

Homology

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BLAST of CaUC11G215490 vs. NCBI nr
Match: XP_038889962.1 (transcription repressor MYB5 [Benincasa hispida])

HSP 1 Score: 421.8 bits (1083), Expect = 4.0e-114
Identity = 216/248 (87.10%), Postives = 220/248 (88.71%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESKAMKQQPKKNLWKPEEDLILRNYVETHGE NWATVSQES       GLMRGGKSCR
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGEGNWATVSQES-------GLMRGGKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVIND---------NDNGADLAHDTRRR 180
           NGLQDKRKAN SNSCKKNDDDN DDGNNKKQKKVIN          +DNG +LAHDT+RR
Sbjct: 121 NGLQDKRKANASNSCKKNDDDNDDDGNNKKQKKVINQTGYPQPPICSDNGTNLAHDTQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENREVTDPW +DDI SSHYNINSPMV ANN AFNFDDEPYFDHLDP FLFE FGCSS
Sbjct: 181 NQEENREVTDPWKIDDI-SSHYNINSPMVAANNVAFNFDDEPYFDHLDPLFLFEAFGCSS 240

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BLAST of CaUC11G215490 vs. NCBI nr
Match: XP_004139409.1 (transcription factor WER [Cucumis sativus])

HSP 1 Score: 421.0 bits (1081), Expect = 6.8e-114
Identity = 212/248 (85.48%), Postives = 218/248 (87.90%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESKAMKQQPKKNLWKPEEDLILR+YVETHGE NWA VSQES       GLMRG KSCR
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDLILRSYVETHGEGNWAIVSQES-------GLMRGAKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVIND---------NDNGADLAHDTRRR 180
           NGLQDKRKAN+SNSCKKNDD+N DDGNNKKQKKVIN          +DNG DLAHD +RR
Sbjct: 121 NGLQDKRKANNSNSCKKNDDNNSDDGNNKKQKKVINQIYYPQPPICSDNGTDLAHDIQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENRE  DPWNMDDI SSHYNINSPM+PANN  FNFDDEPYFDHLDPFFLFE FGCSS
Sbjct: 181 NQEENREKQDPWNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSS 240

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BLAST of CaUC11G215490 vs. NCBI nr
Match: XP_008456991.1 (PREDICTED: transcription factor WER-like [Cucumis melo] >KAA0063534.1 transcription factor WER-like [Cucumis melo var. makuwa] >TYJ97861.1 transcription factor WER-like [Cucumis melo var. makuwa])

HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112
Identity = 211/248 (85.08%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESKAMKQQPKKNLWKPEED ILR+YVETHGE NWATVSQES       GLMRG KSCR
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQES-------GLMRGAKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVIND---------NDNGADLAHDTRRR 180
           NGLQDKRKAN+SNSCKKNDD+N DDGNNKKQKKVIN           DNGADLAHD +RR
Sbjct: 121 NGLQDKRKANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENRE  +P NMDDI SSHYNINSPM+PANN  FNFDDEPYFDHLDPFFLFE FGCSS
Sbjct: 181 NQEENREKQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSS 240

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BLAST of CaUC11G215490 vs. NCBI nr
Match: XP_023545990.1 (transcription factor MYB82 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 3.2e-111
Identity = 212/248 (85.48%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESK MKQQ KKNLWKPEEDLILRNYVETHGE NWATVSQES       GLMRGGKSCR
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQES-------GLMRGGKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVINDN---------DNGADLAHDTRRR 180
           NGLQDKRKANDSNS KKNDDDN DD NNKKQKKVIN           DNG +LAHDT+RR
Sbjct: 121 NGLQDKRKANDSNSHKKNDDDNDDDVNNKKQKKVINQTCYPQPPICIDNGKNLAHDTQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENREVTDPWNMDDI SSHYNINSP+VPAN+A FNFDDEPYFDHLDPFFL E FGCSS
Sbjct: 181 NQEENREVTDPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSS 240

[Close]

BLAST of CaUC11G215490 vs. NCBI nr
Match: XP_022946431.1 (transcription factor MYB82 [Cucurbita moschata])

HSP 1 Score: 408.3 bits (1048), Expect = 4.6e-110
Identity = 210/248 (84.68%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESK MKQQ KKNLWKPEEDLILRNYVETHGE NWATVSQES       GLMRGGKSCR
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQES-------GLMRGGKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVINDN---------DNGADLAHDTRRR 180
           NGLQDKRKANDSNS KKNDDDN DD NNKKQKKVIN           DNG +LAHDT+RR
Sbjct: 121 NGLQDKRKANDSNSHKKNDDDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ E REVT+PWNMDDI SSHYNINSP+VPAN+A FNFDDEPYFDHLDPFFL E FGCSS
Sbjct: 181 NQEEKREVTEPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSS 240

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BLAST of CaUC11G215490 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 90/125 (72.00%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           K   K+ LWKPEED+IL++YVETHGE NWA +S+ S       GL RGGKSCRLRWKNYL
Sbjct: 9   KSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRS-------GLKRGGKSCRLRWKNYL 68

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 127
           RPNIKRG MS +E+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK     ++
Sbjct: 69  RPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQ 126

Query: 128 KANDS 133
            A +S
Sbjct: 129 NAPES 126

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BLAST of CaUC11G215490 vs. ExPASy Swiss-Prot
Match: Q96276 (Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 12  KKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYLRPNI 71
           KK LW  EED IL +YV THG+ +W  +++++       GL R GKSCRLRW NYL PN+
Sbjct: 13  KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKT-------GLKRCGKSCRLRWMNYLSPNV 72

Query: 72  KRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQDKRKA 130
            RG  + +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  GL D   A
Sbjct: 73  NRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDHSTA 124

[Close]

BLAST of CaUC11G215490 vs. ExPASy Swiss-Prot
Match: A0A4D6Q4S0 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 70/113 (61.95%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           K+   +  W   ED +L++Y+ THGE  W         LP   GL R GKSCRLRW NYL
Sbjct: 9   KEGLNRGAWSAREDKVLKDYINTHGEGKWRD-------LPRRAGLKRCGKSCRLRWLNYL 68

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 121
           RP+IKRG +S +EE+LIIR+HKLLGNRWSLIAGRLPGRTDNE+KNYWNT+L+K
Sbjct: 69  RPDIKRGNISYDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLSK 114

[Close]

BLAST of CaUC11G215490 vs. ExPASy Swiss-Prot
Match: A0A4D6Q5I0 (Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-35
Identity = 72/121 (59.50%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 3   ESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLR 62
           E KA+  +  +  W  EED  L NYV  HG++ W         LP   GL R GKSCRLR
Sbjct: 9   EKKAV--EVNRGTWTAEEDEKLMNYVSAHGDKKW-------RMLPAKAGLKRCGKSCRLR 68

Query: 63  WKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNG 122
           W NYLRP IKRG +S++EEDLIIR+H LLGNRWS+IAGR+PGRTDNE+KN+WNTHL+K  
Sbjct: 69  WLNYLRPGIKRGNISEDEEDLIIRLHNLLGNRWSIIAGRIPGRTDNEIKNHWNTHLSKRS 120

Query: 123 L 124
           L
Sbjct: 129 L 120

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BLAST of CaUC11G215490 vs. ExPASy Swiss-Prot
Match: A0A4D6Q411 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 70/113 (61.95%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           K+   +  W   ED IL  Y++THGE  W +       LP   GL R GKSCRLRW NYL
Sbjct: 9   KEGMNRGAWASMEDKILVTYIKTHGEGKWRS-------LPKRAGLKRCGKSCRLRWLNYL 68

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 121
           RP IKRG +S++EEDLIIR+H LLGNRWSLIAGRLPGRTDNE+KNYWNT+L +
Sbjct: 69  RPGIKRGNISEDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGR 114

[Close]

BLAST of CaUC11G215490 vs. ExPASy TrEMBL
Match: A0A5D3BGT2 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00730 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 211/248 (85.08%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESKAMKQQPKKNLWKPEED ILR+YVETHGE NWATVSQES       GLMRG KSCR
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQES-------GLMRGAKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVIND---------NDNGADLAHDTRRR 180
           NGLQDKRKAN+SNSCKKNDD+N DDGNNKKQKKVIN           DNGADLAHD +RR
Sbjct: 121 NGLQDKRKANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENRE  +P NMDDI SSHYNINSPM+PANN  FNFDDEPYFDHLDPFFLFE FGCSS
Sbjct: 181 NQEENREKQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSS 240

[Close]

BLAST of CaUC11G215490 vs. ExPASy TrEMBL
Match: A0A1S3C427 (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112
Identity = 211/248 (85.08%), Postives = 217/248 (87.50%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESKAMKQQPKKNLWKPEED ILR+YVETHGE NWATVSQES       GLMRG KSCR
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQES-------GLMRGAKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVIND---------NDNGADLAHDTRRR 180
           NGLQDKRKAN+SNSCKKNDD+N DDGNNKKQKKVIN           DNGADLAHD +RR
Sbjct: 121 NGLQDKRKANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENRE  +P NMDDI SSHYNINSPM+PANN  FNFDDEPYFDHLDPFFLFE FGCSS
Sbjct: 181 NQEENREKQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSS 240

[Close]

BLAST of CaUC11G215490 vs. ExPASy TrEMBL
Match: A0A6J1G3P0 (transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.2e-110
Identity = 210/248 (84.68%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESK MKQQ KKNLWKPEEDLILRNYVETHGE NWATVSQES       GLMRGGKSCR
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQES-------GLMRGGKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVINDN---------DNGADLAHDTRRR 180
           NGLQDKRKANDSNS KKNDDDN DD NNKKQKKVIN           DNG +LAHDT+RR
Sbjct: 121 NGLQDKRKANDSNSHKKNDDDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ E REVT+PWNMDDI SSHYNINSP+VPAN+A FNFDDEPYFDHLDPFFL E FGCSS
Sbjct: 181 NQEEKREVTEPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSS 240

[Close]

BLAST of CaUC11G215490 vs. ExPASy TrEMBL
Match: A0A6J1KGL3 (transcription factor MYB82 OS=Cucurbita maxima OX=3661 GN=LOC111493699 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 208/248 (83.87%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESK MKQQ KKNLWKPEEDLILRNYVETHGE NWATVSQES       GLMRGGKSCR
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQES-------GLMRGGKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVINDN---------DNGADLAHDTRRR 180
           NGLQDKRKANDSNS  KNDDDN DD NNKKQKKVIN           DNG +LAHDT+RR
Sbjct: 121 NGLQDKRKANDSNSHMKNDDDNDDDVNNKKQKKVINQTCYPQPPICIDNGINLAHDTQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENREVT+PWNMDDI SSHYNINSP+V AN+A FNFDDEPYFDHLDP FL E FGCSS
Sbjct: 181 NQEENREVTEPWNMDDITSSHYNINSPIVHANDATFNFDDEPYFDHLDPLFLLEAFGCSS 240

[Close]

BLAST of CaUC11G215490 vs. ExPASy TrEMBL
Match: A0A6J1FGK0 (transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 205/248 (82.66%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 1   MEESKAMKQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCR 60
           MEESKAMKQQ KKNLWKPEEDLILRNYVETHGE NWATVSQES       GLMRGGKSCR
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQES-------GLMRGGKSCR 60

Query: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120
           LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK
Sbjct: 61  LRWKNYLRPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 120

Query: 121 NGLQDKRKANDSNSCKKNDDDNQDDGNNKKQKKVIND---------NDNGADLAHDTRRR 180
           NGLQDKRK N+S+SCKK D   +DDGNNKKQKKVIN          +DN A+ AHD +RR
Sbjct: 121 NGLQDKRKVNESSSCKKKD---EDDGNNKKQKKVINQTSYPQPQMCSDNWANQAHDIQRR 180

Query: 181 NQAENREVTDPWNMDDIPSSHYNINSPMVPANNAAFNFDDEPYFDHLDPFFLFEPFGCSS 240
           NQ ENREVTD WNMDDI SSHYNIN PMVPANNA FNFDDEP+F+HLDPFFL E FGCSS
Sbjct: 181 NQEENREVTDLWNMDDITSSHYNINCPMVPANNATFNFDDEPHFNHLDPFFLIEAFGCSS 238

[Close]

BLAST of CaUC11G215490 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-47
Identity = 90/125 (72.00%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           K   K+ LWKPEED+IL++YVETHGE NWA +S+ S       GL RGGKSCRLRWKNYL
Sbjct: 9   KSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRS-------GLKRGGKSCRLRWKNYL 68

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 127
           RPNIKRG MS +E+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK     ++
Sbjct: 69  RPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQ 126

Query: 128 KANDS 133
            A +S
Sbjct: 129 NAPES 126

[Close]

BLAST of CaUC11G215490 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 )

HSP 1 Score: 151.4 bits (381), Expect = 9.4e-37
Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0


Query: 12  KKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYLRPNI 71
           KK LW  EED IL +YV THG+ +W  +++++       GL R GKSCRLRW NYL PN+
Sbjct: 13  KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKT-------GLKRCGKSCRLRWMNYLSPNV 72

Query: 72  KRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQDKRKA 130
            RG  + +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  GL D   A
Sbjct: 73  NRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDHSTA 124

[Close]

BLAST of CaUC11G215490 vs. TAIR 10
Match: AT5G35550.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 5.2e-35
Identity = 73/135 (54.07%), Postives = 94/135 (69.63%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           +++  +  W   ED ILR+Y+ THGE  W+T       LP+  GL R GKSCRLRWKNYL
Sbjct: 11  REELNRGAWTDHEDKILRDYITTHGEGKWST-------LPNQAGLKRCGKSCRLRWKNYL 70

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 127
           RP IKRG +S +EE+LIIR+H LLGNRWSLIAGRLPGRTDNE+KN+WN++L K   + + 
Sbjct: 71  RPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQT 130

Query: 128 KANDSNSCKKNDDDN 143
           K         N+++N
Sbjct: 131 KQPKRIKHSTNNENN 138

[Close]

BLAST of CaUC11G215490 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 )

HSP 1 Score: 144.8 bits (364), Expect = 8.8e-35
Identity = 65/113 (57.52%), Postives = 81/113 (71.68%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           K    K  W  EED +L +Y+  HGE  W +       LP   GL R GKSCRLRW NYL
Sbjct: 9   KAHMNKGAWTKEEDQLLVDYIRKHGEGCWRS-------LPRAAGLQRCGKSCRLRWMNYL 68

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 121
           RP++KRG  ++EE++LII++H LLGN+WSLIAGRLPGRTDNE+KNYWNTH+ +
Sbjct: 69  RPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKR 114

[Close]

BLAST of CaUC11G215490 vs. TAIR 10
Match: AT3G13540.1 (myb domain protein 5 )

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 8   KQQPKKNLWKPEEDLILRNYVETHGERNWATVSQESAFLPHFLGLMRGGKSCRLRWKNYL 67
           K   K+  W  EED IL ++++  GE  W +       LP   GL+R GKSCRLRW NYL
Sbjct: 20  KMGMKRGPWTVEEDEILVSFIKKEGEGRWRS-------LPKRAGLLRCGKSCRLRWMNYL 79

Query: 68  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQ--- 127
           RP++KRGG++ +EEDLI+R+H+LLGNRWSLIAGR+PGRTDNE+KNYWNTHL K  L+   
Sbjct: 80  RPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQGI 139

Query: 128 --DKRKANDSNSCKKNDDD 142
                K  D+N+  K +++
Sbjct: 140 DPQTHKPLDANNIHKPEEE 151

The following BLAST results are available for this feature:

BLAST of CaUC11G215490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889962.1	4.0e-114	87.10	transcription repressor MYB5 [Benincasa hispida]	[more]
XP_004139409.1	6.8e-114	85.48	transcription factor WER [Cucumis sativus]	[more]
XP_008456991.1	2.9e-112	85.08	PREDICTED: transcription factor WER-like [Cucumis melo] >KAA0063534.1 transcript...	[more]
XP_023545990.1	3.2e-111	85.48	transcription factor MYB82 [Cucurbita pepo subsp. pepo]	[more]
XP_022946431.1	4.6e-110	84.68	transcription factor MYB82 [Cucurbita moschata]	[more]

BLAST of CaUC11G215490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTF7	1.7e-46	72.00	Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1	[more]
Q96276	1.3e-35	61.34	Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1	[more]
A0A4D6Q4S0	1.3e-35	61.95	Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 ...	[more]
A0A4D6Q5I0	3.8e-35	59.50	Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 ...	[more]
A0A4D6Q411	1.5e-34	61.95	Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 ...	[more]

BLAST of CaUC11G215490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGT2	1.4e-112	85.08	Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C427	1.4e-112	85.08	transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1	[more]
A0A6J1G3P0	2.2e-110	84.68	transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV...	[more]
A0A6J1KGL3	1.2e-108	83.87	transcription factor MYB82 OS=Cucurbita maxima OX=3661 GN=LOC111493699 PE=4 SV=1	[more]
A0A6J1FGK0	1.8e-107	82.66	transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4...	[more]

BLAST of CaUC11G215490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52600.1	1.2e-47	72.00	myb domain protein 82	[more]
AT5G40330.1	9.4e-37	61.34	myb domain protein 23	[more]
AT5G35550.1	5.2e-35	54.07	Duplicated homeodomain-like superfamily protein	[more]
AT1G22640.1	8.8e-35	57.52	myb domain protein 3	[more]
AT3G13540.1	1.5e-34	52.52	myb domain protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 12..69 e-value: 4.0E-10 score: 49.6 coord: 72..120 e-value: 1.8E-16 score: 70.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 8..67 score: 9.779049
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 68..118 score: 10.51063
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 76..118 e-value: 2.43154E-12 score: 57.9706
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..67 e-value: 7.42158E-9 score: 48.3406
None	No IPR available	GENE3D	1.10.10.60		coord: 76..153 e-value: 6.0E-20 score: 72.9
None	No IPR available	GENE3D	1.10.10.60		coord: 13..72 e-value: 5.4E-17 score: 63.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..182
None	No IPR available	PANTHER	PTHR47999	TRANSCRIPTION FACTOR MYB8-RELATED-RELATED	coord: 5..226
None	No IPR available	PANTHER	PTHR47999:SF21	TUBER-SPECIFIC AND SUCROSE-RESPONSIVE ELEMENT BINDING FACTOR	coord: 5..226
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..67 e-value: 4.4E-11 score: 42.8 coord: 73..118 e-value: 4.2E-14 score: 52.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 68..122 score: 23.929272
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 12..67 score: 12.938039
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G215490.1	CaUC11G215490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity