
CaUC11G215450 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAAGAGAACAACGTAAGCAACATCCACAAAGTAAAATAAAAAGAAAACCAATAGGAAACAAACACGTGTCAATCAATGGAGAATTTTTCAAAACCCTTTTCTTTGTTGTTCTTCGTACGACGTGTCGTCTTTTGAATTGTTCGTTCTTTTAATCTCATCGGTGAGAATATGCAGACGATGATCGCACTCTTCGTAGCCATGAACGAAGATGACCCAAAGTTTCAGAGCTTCAAATGCTAAGAATTTCTCTCTTTCCTAATTTGATTTCCATCTGAAATCCTTTGGAATTGAGTTTGTTGTAATTAATTTGTTTGTGGTTGATGAGATCGAGAGAGTTTTAAACTTTAACCTAATCCGATCATTTTCTCTGCGTTTTTAATGCTTCGATTTTGTTTGGTGGTGTTTTTTTTAGTTTTTTTATTTTTATTTGTTGTTGTTGAATTGGAATATTGTTGAAGATGTTTTGGTTTGGATCCGGTGGATTTGCTGCATGAATTGGACGGAAGGTTTGGGTGCGGATCGAGCGCTTAGAGAGTAGAGGAAGCTGAGCAGCGGCGCTGAAACATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTCTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCGAGGTCATCGAATCAGTCTGTTTTTCCGTTCCCCCAGACGCCCTCCTCACAATCGGCTCATTTAGTCGATTATCTTAGAGCAATTTTTCCTGATATGGATAAGCAGGTCTGTTTGGACACCTTTTTTTTTCTCCTAACAAGGAATTATAAAGCATTTCACAACCTTCACATTTTAAATTTAAATAGAACTAAGGTAAATAATATATGCAATGGGTAGATGTTATCAATCGTCGAAATATGAACAACTTGTGTTGTTGTATTTTGAAGACATTTCTGATGAAAGTATACTTGAATACTTTCTGATTGCTTTGAAATTGATATTCTAGCTTCTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGCTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAAATGCTTCAAACTCCTCCGATGTAGCTTTGGAAGCAAATATTCAACCTCAATCCCAAGGTCTGTATTTTATGTCTACTGAACTGCATCTTGCACTTAATAATTATATTCTCAATGCTCTGTTATTGCCTTTATAGGGAATAGTTTCAATTTTACGACTGCGAGTGCACAAGAGAAGATTTCTATATTTTGTTCATTTATGAATATTTACTTGTGACGCTCTTGACATATTCTGAAGTGTTGTATTTTCTTGATAAACCCTTTATTTTACAGACCAAGTACTTCTCATAGGAGAAGGGATAATAGGGATTCATTGTTTGAAGTCATAACAAGCTAGGTGCTTGGCTTGTTGGTTAGATTAGTAATAACCCAAAGCTAAGAAGTCAAACTTATATTTAGTACATGGATTTGCATCTCAAAACTATGGATTGTGAGTTTTCTAATACCATAGTCAACTTAACCTCCGAAGCCATGAATACAAATTTATTTAATTGACCTCTTATACTGTACATTAAGCATATTGCACAAACCAAACACGGTTCACCTAGAACCAAATCATACAAATTTAAGTGTTTCTGTTCCAAGCTCCATTCAGTTTGAACGTGCAGAAACCAAATATCCTGAAGTTGTGCATTTTGTTTTTTGTTTTACATTTCTCTGTGAAGCTAGGTCTGTCTCGTTTGCCACACAGTATGGCTTTTGATATCATTTTTATACCTTGAAATGAAATCAACTTGACCTGGATTATAAGTAGTAGTTTCATTCAAATTTACAACTAACTAGTAGAGAATGGTTGTGTGAAATGAGTGATCTTTTATTTTCTTACTTGAATATCCGTGACAATAATAGTTTAGGGCAGTTCATTTTTAGGTCGTTAGGACATTGACTGGTGTGGAAGTCTGGTTAATTAAGTCAGCTTGGATTGGCATCAGAGAATGCCTAGGGGATCAACTTTGGTGATGTCATGCAGAGCTTTCTTAGTTCTGATGACGCTGTCATACATAGAAGGTTTTTGTTTAAACTCATTTTTAGCAGAGGCAGAATCTTTTAATTAGAATAACTAATAAGGAGATTCCCAACATCATTCATGGAAAATTTTCTTTGATCTTTTGTTGGTGGAAGTTAGTTTGCTGCCAATCAATTTAGGATATATATATATATATATGTTTTAGCCTTGTCTGCAAATTGATTTTATATAGTGTTCCATTGTTTCTAAGTTCAGTTGATTGGAACACTTTTTTGTAACTTCTATTTTGCATGGATTGCCGTGCACACCCTTGTCCGTCTACTCCCCTTTTGTAATCATTATTTCTTTGAACACTCTGTTTCTTTCCTCCTCCCCGAATTTGGCTTTGAGTGAATTCCCATGGTGAAGAGTACACTGTAGAATCCCTATGCCCCTTTGTTGATCTTTTATTACTTGTTTAACGAGCAGAAAATTTTCCCCCCTCATAAAAGCCTTATAGAATAAAAATTTCTTTCGAGATATATATTCTCTCAATGTACGACCATACTTGTTAACTGTTTGCTGGGCTGCATACTAAGTAGGCTACGAGCTAGGCACCTTCAATTTAGTCTATAAACTTAAACAATCCAAAGACTGTTTAAGGACATGCAGATATCTTCTGCTGAAATTCGAATCTCCAATACATTTTAAACTGCTTATTAATAATAACAGTTTGAATTGTTTCCTTTAAAAGAAAAATGAAAACAGTTTGAATTATACTTGCAAATTTTGTTTTAGGTTTCTTTCTTGTGATGCCCTTAGATCCAGTTTACATTGCATCTTGTGAACTTTATCTTTTTGTTTAAAATGAAGCAGAAACACAAGGAGAAGCTGCAATTGCTGAGGATGCAACAGCTTCTGAGAATCTTCCCACAAATGGGGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAATATGGATGATGCACGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTCGAAAAGTCCATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGTCTTGGAACATTTACAATTTCTGCTACTTGTTTGTGCCATCAATATTCTTGCCACTACAATTTTTGGGAGCCTTACCATGATTCTTATTTCGTTTATCTAATCTAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCACTTATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATTCAGCATGAACGTCAGAAAGAATATGAAGGCAGGAACCAGGAGTTGCAACATCTTAAAGAATTAGTCTCTCAGTATCAGGAACAGTTGAAAACCCTAGAGGTTGGTTCCATAAATGCTCTAAGATCTTGCTTCCTCAGTTACTAAAAGCCACAGTTTTAACATCCTTAATATCCTTTACACAATTTCTCATTAAAAAAAATCATTAACATAATACTCTTTGGTATCACGCATACTCAGGATCTGAAATCTCTTTCATCTTTTAATGAACTATTAGGTGAATAATTATGCACTTACAGTGCATCTCAAGCAAGCTCAACAAAGTAGCTCCATTCCAGGGCGTTTTCACCCCGATGTTTTCTAATCAGGAATTGCTACATACCTCGAAATTGCGGTAAACTCGATCCTCACAAGACTTCTATCCTATCCAAATCGTAAGATGATCGACCTGAACTTCAATCAGTAGCATGTTTATGGGTACCTCTTTTTTATCTAGAAGGTATAAAAGAGTCAAGGCATCTACTTTTCCATCTGTCAGTACAGAGACTAATTCCCTTTTTTCTTTTGTGTTGTTTCTGTCCTGCCATTGGACTAAATTTGATTCTAATAGATATTTTTTTGTCCTTTCATTATCTGATTATAGTTCGAAGCCTGATTGGAATACAGAGAATAATTAACATTTCGAATGAAAAAGTTTCTCTACTTTCTTTCATATTCTTGTCTAAATATCTACTTTTCCGATACCCGATTCTTGATTGGAATATGCCTACCCCACCTCCTAATGAGATAACAAATGAATCTAGTTCGTTCCTATTCTACCAATTATGCTCTCTATAATGCCTAGGATCTATTTAACTTCTAAGCACAACCGTAGCCCATTGATGAGTGATTTTCATAAAGGAGTAGGGTGATGTGATTTTTATACCATGCTTCATCAATGGGTTTTTGCGTTTTAACTTTATACTGCAAACTTGTGATGGTTATTTGTAGAAGAAATTCTCTTCTGGAGAAAGCTTCACAGCATTGCGATCTCGGCAAAGATATGATTTCCAATACCAGTCTGGCGTGATTTTCTGTTTGCTTCGAAATTGCAAGGTAAAATAACTTATTAGTTAGAAAGTAATTCCAAAC AGAGAAGAGAACAACGTAAGCAACATCCACAAAGTAAAATAAAAAGAAAACCAATAGGAAACAAACACGTGTCAATCAATGGAGAATTTTTCAAAACCCTTTTCTTTGTTGTTCTTCGTACGACGTGTCGTCTTTTGAATTGTTCGTTCTTTTAATCTCATCGGTGAGAATATGCAGACGATGATCGCACTCTTCGTAGCCATGAACGAAGATGACCCAAAGTTTCAGAGCTTCAAATGCTAAGAATTTCTCTCTTTCCTAATTTGATTTCCATCTGAAATCCTTTGGAATTGAGTTTGTTGTAATTAATTTGTTTGTGGTTGATGAGATCGAGAGAGTTTTAAACTTTAACCTAATCCGATCATTTTCTCTGCGTTTTTAATGCTTCGATTTTGTTTGGTGGTGTTTTTTTTAGTTTTTTTATTTTTATTTGTTGTTGTTGAATTGGAATATTGTTGAAGATGTTTTGGTTTGGATCCGGTGGATTTGCTGCATGAATTGGACGGAAGGTTTGGGTGCGGATCGAGCGCTTAGAGAGTAGAGGAAGCTGAGCAGCGGCGCTGAAACATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTCTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCGAGGTCATCGAATCAGTCTGTTTTTCCGTTCCCCCAGACGCCCTCCTCACAATCGGCTCATTTAGTCGATTATCTTAGAGCAATTTTTCCTGATATGGATAAGCAGCTTCTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGCTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAAATGCTTCAAACTCCTCCGATGTAGCTTTGGAAGCAAATATTCAACCTCAATCCCAAGAAACACAAGGAGAAGCTGCAATTGCTGAGGATGCAACAGCTTCTGAGAATCTTCCCACAAATGGGGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAATATGGATGATGCACGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTCGAAAAGTCCATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCACTTATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATTCAGCATGAACGTCAGAAAGAATATGAAGGCAGGAACCAGGAGTTGCAACATCTTAAAGAATTAGTCTCTCAGTATCAGGAACAGTTGAAAACCCTAGAGTGCATCTCAAGCAAGCTCAACAAAGTAGCTCCATTCCAGGGCGTTTTCACCCCGATGTTTTCTAATCAGGAATTGCTACATACCTCGAAATTGCGAAGAAATTCTCTTCTGGAGAAAGCTTCACAGCATTGCGATCTCGGCAAAGATATGATTTCCAATACCAGTCTGGCGTGATTTTCTGTTTGCTTCGAAATTGCAAGGTAAAATAACTTATTAGTTAGAAAGTAATTCCAAAC ATGTCTGCCATCGTGTGCGGGAAGAGATCCTTATTTGAAGACCTGCCTACGCCTCCCGTCTCTAAGAGAATTCGTTGTTCGTCTTCTTCGCCTGTGCGGTTTTCGCCTCCGAGGTCATCGAATCAGTCTGTTTTTCCGTTCCCCCAGACGCCCTCCTCACAATCGGCTCATTTAGTCGATTATCTTAGAGCAATTTTTCCTGATATGGATAAGCAGCTTCTAGAGAGAGCACTTGAAGAATGTGGTGATGATCTAGATTTAGCCATCAGAAGCTTGAACCAGCTTCATTTAGGGTATAATGACAGAAACTTGGGAAATGCTTCAAACTCCTCCGATGTAGCTTTGGAAGCAAATATTCAACCTCAATCCCAAGAAACACAAGGAGAAGCTGCAATTGCTGAGGATGCAACAGCTTCTGAGAATCTTCCCACAAATGGGGCAGAATGGGTGGATCTCTTTGTGAACGAAATGACAAGTGCCTCAAATATGGATGATGCACGAAGCCGTGCTTCAAGAGTTCTTGAGGTTCTCGAAAAGTCCATCTGTGCCCGTGCAAATGCAGAAGCAGCAAATAATTTTCATCAGGAAAACAAGATGCTTAGGGAACAAGTGGAAGCACTTATTCAGGAAAACACTATTCTCAAACGAGCTGTCTCTATTCAGCATGAACGTCAGAAAGAATATGAAGGCAGGAACCAGGAGTTGCAACATCTTAAAGAATTAGTCTCTCAGTATCAGGAACAGTTGAAAACCCTAGAGTGCATCTCAAGCAAGCTCAACAAAGTAGCTCCATTCCAGGGCGTTTTCACCCCGATGTTTTCTAATCAGGAATTGCTACATACCTCGAAATTGCGAAGAAATTCTCTTCTGGAGAAAGCTTCACAGCATTGCGATCTCGGCAAAGATATGATTTCCAATACCAGTCTGGCGTGA MSAIVCGKRSLFEDLPTPPVSKRIRCSSSSPVRFSPPRSSNQSVFPFPQTPSSQSAHLVDYLRAIFPDMDKQLLERALEECGDDLDLAIRSLNQLHLGYNDRNLGNASNSSDVALEANIQPQSQETQGEAAIAEDATASENLPTNGAEWVDLFVNEMTSASNMDDARSRASRVLEVLEKSICARANAEAANNFHQENKMLREQVEALIQENTILKRAVSIQHERQKEYEGRNQELQHLKELVSQYQEQLKTLECISSKLNKVAPFQGVFTPMFSNQELLHTSKLRRNSLLEKASQHCDLGKDMISNTSLA Homology
BLAST of CaUC11G215450 vs. NCBI nr
Match: XP_038890913.1 (uncharacterized protein LOC120080344 [Benincasa hispida]) HSP 1 Score: 468.0 bits (1203), Expect = 6.3e-128 Identity = 248/253 (98.02%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of CaUC11G215450 vs. NCBI nr
Match: XP_008457047.1 (PREDICTED: uncharacterized protein LOC103496812 isoform X2 [Cucumis melo] >TYJ97857.1 uncharacterized protein E5676_scaffold285G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-127 Identity = 246/253 (97.23%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of CaUC11G215450 vs. NCBI nr
Match: XP_008457037.1 (PREDICTED: uncharacterized protein LOC103496812 isoform X1 [Cucumis melo] >KAA0063530.1 uncharacterized protein E6C27_scaffold329G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 461.1 bits (1185), Expect = 7.7e-126 Identity = 246/254 (96.85%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of CaUC11G215450 vs. NCBI nr
Match: XP_011648697.1 (uncharacterized protein LOC101217268 isoform X2 [Cucumis sativus] >KGN60704.1 hypothetical protein Csa_019372 [Cucumis sativus]) HSP 1 Score: 460.7 bits (1184), Expect = 1.0e-125 Identity = 244/253 (96.44%), Postives = 249/253 (98.42%), Query Frame = 0
BLAST of CaUC11G215450 vs. NCBI nr
Match: XP_011648696.1 (uncharacterized protein LOC101217268 isoform X1 [Cucumis sativus]) HSP 1 Score: 456.1 bits (1172), Expect = 2.5e-124 Identity = 244/254 (96.06%), Postives = 249/254 (98.03%), Query Frame = 0
BLAST of CaUC11G215450 vs. ExPASy TrEMBL
Match: A0A5D3BFF3 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00690 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127 Identity = 246/253 (97.23%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of CaUC11G215450 vs. ExPASy TrEMBL
Match: A0A1S3C471 (uncharacterized protein LOC103496812 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496812 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127 Identity = 246/253 (97.23%), Postives = 251/253 (99.21%), Query Frame = 0
BLAST of CaUC11G215450 vs. ExPASy TrEMBL
Match: A0A5A7V8M8 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00350 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.7e-126 Identity = 246/254 (96.85%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of CaUC11G215450 vs. ExPASy TrEMBL
Match: A0A1S3C4J9 (uncharacterized protein LOC103496812 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496812 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.7e-126 Identity = 246/254 (96.85%), Postives = 251/254 (98.82%), Query Frame = 0
BLAST of CaUC11G215450 vs. ExPASy TrEMBL
Match: A0A0A0LI42 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G007970 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.9e-126 Identity = 244/253 (96.44%), Postives = 249/253 (98.42%), Query Frame = 0
BLAST of CaUC11G215450 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein ) HSP 1 Score: 238.8 bits (608), Expect = 5.8e-63 Identity = 146/257 (56.81%), Postives = 184/257 (71.60%), Query Frame = 0
BLAST of CaUC11G215450 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein ) HSP 1 Score: 237.7 bits (605), Expect = 1.3e-62 Identity = 144/257 (56.03%), Postives = 182/257 (70.82%), Query Frame = 0
BLAST of CaUC11G215450 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein ) HSP 1 Score: 168.3 bits (425), Expect = 9.6e-42 Identity = 107/200 (53.50%), Postives = 131/200 (65.50%), Query Frame = 0
BLAST of CaUC11G215450 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 158.7 bits (400), Expect = 7.6e-39 Identity = 108/256 (42.19%), Postives = 145/256 (56.64%), Query Frame = 0
BLAST of CaUC11G215450 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). ) HSP 1 Score: 153.3 bits (386), Expect = 3.2e-37 Identity = 109/259 (42.08%), Postives = 145/259 (55.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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