CaUC11G215290 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G215290
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Anaphase-promoting complex
Location	Ciama_Chr11: 28520072 .. 28522073 (-)
RNA-Seq Expression	CaUC11G215290
Synteny	CaUC11G215290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGAGGTGTAGATAAAAGGTAATAGCAGTTTTAACATTTAATTTTTTTTAAGTTTATAGATATTTATGCTACAAAGTTTTAACGGTTTTTGTTCATATATTAACATTAGGGTATTTTGAACTTAAGGGTAGTTTTGAAATTTTTAAAAGTTCAATAGTATTGATTTTGTATAATTTGAAGTTTAAATTATAAATAAATAGATAGATTAATTAAATAATAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATTTTGCTAAAGGTTCCCCAGATTTCTCCGGCGCCTGCGAAACCGGCAAAATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCGCCGCCCTCGCCACCGCCTCCACTGACACAACCTCCACCAACTCCTCTGTCCTCCATAACCTCAATCGCAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGGTATTTCCTCTTGATATCATCCATTCCATATACTTCTCAAATCTCCGATTAGTTGCCCTACTGAACGGCAACCATAGGGGATTTGTCCAATTCTATAACGGCGTTTCCCACTGTGTGATCTCTCTGAAGTCCAGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGTGGAAGGCTACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAGTAAGTGAATTTCTTGTTGGTAATGTAGTAAGCATACCTTTCTTGATTTATTTTATGATGGACATGAGAATTCCTGTAGAATATACTGGACGGATTGAAAGCATTTAGTTTTGAGTTGTATCATCAGATTGTTCTCTACTTGTTCGATTAATGGCATTAGATAGAAACATACCCAAATTTTTCAGGGAAAAGGAAAACTCAAGCAATTGTGACTTACTAACAAAAATTCCCAGTTTGAAGATGAAACTAAATTCGTAACCTAATGACTTATTGTTGGAGGATGAATGTATAATCAAATACTAAACAAATCCCAGATCAAATAATGACAAAAGATAGAGCTAAGAAACTAGTTCTTAAGATCTTGTTCATGTGATACATTTTGGTTGGTCATTTCTTCCCACTTTTTCCTATATGTGTTATTGTGCAAGTGTAACGCTCATCTGTATTCCATTGATCTCAAATACTCATTTGTAACCTTAAGTTTATTGACTAAACTCCATTTCTTTACTGATTTTATATGATAAAATGGCTACTGGCATTTTGTTCATCAAGTTTCTGAAAACCCCTTTGTACTGCTTCATTATTACATGACCATGGGTGTATTTTCTGTAGTCTTGTTGATAGACTGATATTTAGAAGCTTCTCTGCCTTGGTTTGTGTATGAACTGAGTTGACCTTGAAATTCACCAGTCAAATTATGATATTAGTTAGAAAGACAGCTAGCAAGCAAGTCGAGTAAGACAACTATTATTAAGTTGAGCGAGTTTTTGGTAGTACTAATCAAAGACTAAAACTTAAAGTCCAAATTCTCATAACGTTGATAGGCACTTATCTATCGTGGATCTCTGTAGTCTTCCTTACAACCGCTACCAATTCTTAAACAGAAAGTTGTATGCTTGCGAAGACCGTTTCTGATCGAGAATGGAATTCATCCCGTGAAACATCGTCTCATTATCACCAATAGTTATTTCGTTGAACACTTCTATTTAAATTTGCTTAAAGTCTGTTTCTACATGGGACCAATCCACCCTAATTAAGTTGTGATGTCACAATCACATAATACTATGTTTGTTGCTCAACTTGGCTAAGTTGGGAAATTTTGCGAATCCAAAGTAAGTCACATGGGAAGTCTCTGTTCATTTCATCCAATCTTAGCAAAAGTGGTTTAAGTTGGATCATTCCTTATCTAGGTGATTTTTGGAAAATTCAAGGAGAGGGAAGCATTTGAAAGCATCTTTGGTTTGATGACTAAAGATAACACCATTGGACTAACATAG

mRNA sequence

ATGAGATATTTATGCTACAAAGTTTTAACGGTTTTTGTTCATATATTAACATTAGGGTATTTTGAACTTAAGGGTTCCCCAGATTTCTCCGGCGCCTGCGAAACCGGCAAAATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCGCCGCCCTCGCCACCGCCTCCACTGACACAACCTCCACCAACTCCTCTGTCCTCCATAACCTCAATCGCAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGTGGAAGGCTACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAACTGATATTTAGAAGCTTCTCTGCCTTGGTGATTTTTGGAAAATTCAAGGAGAGGGAAGCATTTGAAAGCATCTTTGGTTTGATGACTAAAGATAACACCATTGGACTAACATAG

Coding sequence (CDS)

ATGAGATATTTATGCTACAAAGTTTTAACGGTTTTTGTTCATATATTAACATTAGGGTATTTTGAACTTAAGGGTTCCCCAGATTTCTCCGGCGCCTGCGAAACCGGCAAAATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCGCCGCCCTCGCCACCGCCTCCACTGACACAACCTCCACCAACTCCTCTGTCCTCCATAACCTCAATCGCAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGTGGAAGGCTACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAACTGATATTTAGAAGCTTCTCTGCCTTGGTGATTTTTGGAAAATTCAAGGAGAGGGAAGCATTTGAAAGCATCTTTGGTTTGATGACTAAAGATAACACCATTGGACTAACATAG

Protein sequence

MRYLCYKVLTVFVHILTLGYFELKGSPDFSGACETGKMLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRLDASDRRRLLKSRGRLLLILRSFDRRSFHSEELIFRSFSALVIFGKFKEREAFESIFGLMTKDNTIGLT

Homology

[Close]

BLAST of CaUC11G215290 vs. NCBI nr
Match: KAG6586369.1 (Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-11
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 38 MLRRQPTKIDVKIEDKEELEQLRQRAALATA------STDTTST-NSSVLHNLNRNKDPA 97
          MLRRQP+KI+VKIEDKEELEQ R+RAA A A      +TDTTS+  +S+LHNLNRNKDP 
Sbjct: 1  MLRRQPSKIEVKIEDKEELEQARKRAAAAAAAAAASTTTDTTSSAAASLLHNLNRNKDPT 60

[Close]

BLAST of CaUC11G215290 vs. NCBI nr
Match: KGN60724.1 (hypothetical protein Csa_019232 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-10
Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRLD 97
           MLRRQPT IDV+IEDKEELEQLR+R A A       ST SS+LHNL+RNKDPASKAQRL 
Sbjct: 1   MLRRQPTMIDVEIEDKEELEQLRKRPAAA-------STYSSLLHNLSRNKDPASKAQRLG 55

Query: 98  AS 100
            S
Sbjct: 61  IS 55

[Close]

BLAST of CaUC11G215290 vs. NCBI nr
Match: OVA19190.1 (Anaphase-promoting complex [Macleaya cordata])

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07
Identity = 35/65 (53.85%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSVLHNLNRNKDPASKAQ 97
           MLRR+P+KI+VKIEDKEELE+ R+R+  ++A+T TT+T    ++++H L+RNKDP++K Q
Sbjct: 1   MLRRKPSKIEVKIEDKEELEEARKRSIASSAATTTTTTTTRAAALIHQLDRNKDPSNKPQ 60

Query: 98  RLDAS 100
           R+  S
Sbjct: 61  RIGLS 65

[Close]

BLAST of CaUC11G215290 vs. NCBI nr
Match: PNX80228.1 (hypothetical protein L195_g036225 [Trifolium pratense])

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-07
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRLD 97
           MLRR+PTKI VKIEDKEELE+ R+R A AT +T TT+  +S+L   +R +DP+SKA R+ 
Sbjct: 1   MLRRKPTKIQVKIEDKEELEEARRRNAAATNTTTTTTGAASLLRQFDRAEDPSSKANRIG 60

Query: 98  AS 100
            S
Sbjct: 61  LS 62

[Close]

BLAST of CaUC11G215290 vs. NCBI nr
Match: DAD45067.1 (TPA_asm: hypothetical protein HUJ06_003297 [Nelumbo nucifera])

HSP 1 Score: 65.1 bits (157), Expect = 6.5e-07
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRLD 97
           MLRR+P+KI+VK+EDKEELE+ R+R   ATA     +  +S+LH+LNRNKDP++K+QR+ 
Sbjct: 1   MLRRKPSKIEVKVEDKEELEEARKR---ATAGPAPPTGAASILHHLNRNKDPSTKSQRIG 59

Query: 98  AS 100
            S
Sbjct: 61  LS 59

[Close]

BLAST of CaUC11G215290 vs. ExPASy TrEMBL
Match: A0A0A0LFB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008650 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 9.5e-12
Identity = 46/67 (68.66%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALA-----TASTDTTSTNSSVLHNLNRNKDPASK 97
           MLRRQP+KI+VKIEDKEELEQ R+RAA A     T +TD TS   S+LHN+NRNKD ASK
Sbjct: 1   MLRRQPSKIEVKIEDKEELEQARKRAAAAASTTTTTTTDATSAAGSLLHNINRNKDQASK 60

Query: 98  AQRLDAS 100
           AQRL  S
Sbjct: 61  AQRLGIS 67

[Close]

BLAST of CaUC11G215290 vs. ExPASy TrEMBL
Match: A0A0A0LI59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008400 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.0e-10
Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRLD 97
           MLRRQPT IDV+IEDKEELEQLR+R A A       ST SS+LHNL+RNKDPASKAQRL 
Sbjct: 1   MLRRQPTMIDVEIEDKEELEQLRKRPAAA-------STYSSLLHNLSRNKDPASKAQRLG 55

Query: 98  AS 100
            S
Sbjct: 61  IS 55

[Close]

BLAST of CaUC11G215290 vs. ExPASy TrEMBL
Match: A0A200R928 (Anaphase-promoting complex OS=Macleaya cordata OX=56857 GN=BVC80_8407g9 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.9e-08
Identity = 35/65 (53.85%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSVLHNLNRNKDPASKAQ 97
           MLRR+P+KI+VKIEDKEELE+ R+R+  ++A+T TT+T    ++++H L+RNKDP++K Q
Sbjct: 1   MLRRKPSKIEVKIEDKEELEEARKRSIASSAATTTTTTTTRAAALIHQLDRNKDPSNKPQ 60

Query: 98  RLDAS 100
           R+  S
Sbjct: 61  RIGLS 65

[Close]

BLAST of CaUC11G215290 vs. ExPASy TrEMBL
Match: A0A2K3LNW2 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036225 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.4e-07
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 38  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRLD 97
           MLRR+PTKI VKIEDKEELE+ R+R A AT +T TT+  +S+L   +R +DP+SKA R+ 
Sbjct: 1   MLRRKPTKIQVKIEDKEELEEARRRNAAATNTTTTTTGAASLLRQFDRAEDPSSKANRIG 60

Query: 98  AS 100
            S
Sbjct: 61  LS 62

[Close]

BLAST of CaUC11G215290 vs. ExPASy TrEMBL
Match: A0A7J6VJG6 (Uncharacterized protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_025150 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.4e-07
Identity = 35/59 (59.32%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 38 MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSVLHNLNRNKDPASKAQRL 97
          MLRR+P+KI+V++EDKEELE+ R+R+A AT +T TT   +SVLH+L++NKDP++K+QR+
Sbjct: 1  MLRRKPSKIEVQLEDKEELEEARKRSAAAT-NTATTGA-ASVLHHLDKNKDPSNKSQRI 57

The following BLAST results are available for this feature:

BLAST of CaUC11G215290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586369.1	2.6e-11	70.15	Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. soro...	[more]
KGN60724.1	2.2e-10	72.58	hypothetical protein Csa_019232 [Cucumis sativus]	[more]
OVA19190.1	1.0e-07	53.85	Anaphase-promoting complex [Macleaya cordata]	[more]
PNX80228.1	5.0e-07	58.06	hypothetical protein L195_g036225 [Trifolium pratense]	[more]
DAD45067.1	6.5e-07	56.45	TPA_asm: hypothetical protein HUJ06_003297 [Nelumbo nucifera]	[more]

BLAST of CaUC11G215290 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G215290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFB1	9.5e-12	68.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008650 PE=4 SV=1	[more]
A0A0A0LI59	1.0e-10	72.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008400 PE=4 SV=1	[more]
A0A200R928	4.9e-08	53.85	Anaphase-promoting complex OS=Macleaya cordata OX=56857 GN=BVC80_8407g9 PE=4 SV=...	[more]
A0A2K3LNW2	2.4e-07	58.06	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036225 PE=4 SV=1	[more]
A0A7J6VJG6	5.4e-07	59.32	Uncharacterized protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_025150 PE=...	[more]

BLAST of CaUC11G215290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018860	Anaphase-promoting complex, subunit CDC26	PFAM	PF10471	ANAPC_CDC26	coord: 38..95 e-value: 5.0E-7 score: 30.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G215290.1	CaUC11G215290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005680	anaphase-promoting complex