CaUC11G214980 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G214980
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	auxin-responsive protein SAUR24-like
Location	Ciama_Chr11: 28253346 .. 28254578 (+)
RNA-Seq Expression	CaUC11G214980
Synteny	CaUC11G214980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTACGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCGACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAGTATCTTGAAGGATGAAAAGCAAAGGGCAAGCTGCCATTTTTTACATTGTTTTTTCTACTCATGAGCTTTATGATACATGTTAGAATGTTGTAGAGCAGAATACCTGTAAATGAGTTGCATTGTAAAGGTGCTTTTTCCAACGGGATTAATGAAATATAGACCAATTGATCTTCAATTTTTGTGTAGCTTATTCACTGGTGCTCTATATGTGATGGACAGTCCGAGCTGTGGGAAATATTTTTTTTTTTATTTGTTAGGAATAGCATAACAAAACTTCAAACATAAAAAAATCCAAGAAAACTGGATTATCATTCCAACTTATGAGTTTATGTGGAAATATAATACTCTTGGTTGGTTTGATAAACACAATCCAATATCGATCCTATTTGCCAACTCTTTACACCTTATGGTGAAAAAACATTCATCTTTTCTCCACTGAGAAAAAATAGCTTTAGCGATTCTTAGATCTTAGGCAATTCATAGATTTAACAGATTACATTATGGTTTGATGTCTATCCTGATTTTGATCAAATAGTAATGAGAAAACTGTTACAAATTTTTCTTCCAATGACTCCAATTCCTGCTTTGATATCCACACTAAGCCGAACCTATTCTGAGTCACTTTTCATTCTTTCACTTAAACCAAATTTAGACATGCAAGTCACTTCACCATCAGCTATCCTCAATGTCAAGCAAATCCCTCACAGTGCAGGCTGTTACAACTAAAAATCAAGCTGATGTCCCCAAAGGTCACAGTGCAATCTATGTTGGAGAAATTCAAAGGAAGCCATTTTGGTTCCATTTCCATTATCATATTTGAATCATCCAACATTTATTTGTTTGATTACGAATGTTGAGGAGTGTAGATAGAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATTTGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGA

mRNA sequence

ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTACGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCGACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAATAGAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATTTGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGA

Coding sequence (CDS)

ATGGGGATTCGATTGCTATCCTTGGTTCCTCGTGCCAAGCAGATCTTAAAGATGCAGTCAGGATTTACCAAAAGTCAGTTGGATGTGCCAAAAGGACATGTAGCTATTTACGTAGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCAATAACGTACCTAAACCATCCATCATTCCAACAACTTCTCAGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCGACAGGGGGCTCTAACAATTCCTTGTAAAGAGGATGCCTTCATTGATCTCACTTCTCGATTGCAAATAGAGCCATTGCATGGGTGGTTTGACAGTTCCCAGCAGAGGATTTGCTTTGATCTCACTTCAAGGCTGCACAGTTCTTGA

Protein sequence

MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQIEPLHGWFDSSQQRICFDLTSRLHSS

Homology

[Close]

BLAST of CaUC11G214980 vs. NCBI nr
Match: XP_022947571.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6605023.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43
Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. NCBI nr
Match: KAG6605019.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43
Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. NCBI nr
Match: XP_023533292.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.1 bits (466), Expect = 7.1e-43
Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRLQ+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. NCBI nr
Match: XP_023007091.1 (auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 184.1 bits (466), Expect = 7.1e-43
Identity = 88/96 (91.67%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. NCBI nr
Match: XP_022947576.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRL +
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHV 96

[Close]

BLAST of CaUC11G214980 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.2e-22
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHRQGALTIPCKEDAFIDLTSRLQ 96
           H  G LTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CaUC11G214980 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.7e-21
Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 17 KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQG 76
          K+ S  T +    PKG +A+YVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF H  G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 ALTIPCKEDAFIDLTSRLQ 96
           LTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CaUC11G214980 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-21
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQG 76
          K+ S  T +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF H  G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 ALTIPCKEDAFIDLTSRLQ 96
           LTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CaUC11G214980 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-20
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 17 KMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHRQG 76
          K+ S  T +    PKG +A+YVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF H  G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 ALTIPCKEDAFIDLTSRLQ 96
           LTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CaUC11G214980 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +    +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHRQGALTIPCKEDAFIDLTSRL 95
           H  G LTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CaUC11G214980 vs. ExPASy TrEMBL
Match: A0A6J1G6T7 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451395 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43
Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. ExPASy TrEMBL
Match: A0A6J1KZJ6 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43
Identity = 88/96 (91.67%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRF+VPI+YLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. ExPASy TrEMBL
Match: A0A6J1G6U1 (auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC111451399 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.9e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIRLLSLVP AKQILKMQSGFTKSQLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEEEFGFHH QG LTIPCKEDAF+DLTSRL +
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHV 96

[Close]

BLAST of CaUC11G214980 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.7e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIR LSLVP AKQILKMQSGFTK+QLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEE+FGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.7e-43
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQ 60
          MGIR LSLVP AKQILKMQSGFTK+QLDVPKGHVA+YVGEIQRKRFVVPI+YLNHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
          LLSHAEE+FGFHH QG LTIPCKEDAFIDLTSRLQ+
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQV 96

[Close]

BLAST of CaUC11G214980 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 5.5e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILK----MQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHP 60
          M IR+  ++  +KQIL+    + S  + S LDVPKG++A+YVGE   KRFVVP++YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF H  G LTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CaUC11G214980 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 1  MGIRLLSLVPRAKQILKMQSGFTKSQLDVPKGHVAIYVGE-IQRKRFVVPITYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + + + +PKGH+A+YVGE +Q++RFVVP+TYL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRL 95
          +LL  AEEEFGF H  G LTIPC E  FIDL SRL
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of CaUC11G214980 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-24
Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGIRLLSLVPRAKQILKMQSGFTKSQLD------VPKGHVAIYVG---EIQRKRFVVPIT 60
           MG+   ++    KQILK+ S   +++        VPKGHVA+YVG   E+++KRFVVPI+
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+H  G LTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CaUC11G214980 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 5.1e-23
Identity = 55/108 (50.93%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 1   MGIRLLSLVPRAKQILKMQSGFTKSQLD-----------VPKGHVAIYVGE-IQRKRFVV 60
           MG+ + S++P AKQI K QS   K+              VPKGHVA+YVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PITYLNHPSFQQLLSHAEEEFGFHHRQGALTIPCKEDAFIDLTSRLQI 97
           PI+YLNHP F++ L+ AEEE GFHH  G LTIPC+E++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of CaUC11G214980 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 5.1e-23
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAIYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +A+YVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHRQGALTIPCKEDAFIDLTSRLQ 96
           H  G LTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of CaUC11G214980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947571.1	5.4e-43	91.67	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022947572.1 auxin-...	[more]
KAG6605019.1	5.4e-43	91.67	Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023533292.1	7.1e-43	90.63	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007091.1	7.1e-43	91.67	auxin-responsive protein SAUR24-like [Cucurbita maxima]	[more]
XP_022947576.1	1.2e-42	90.63	auxin-responsive protein SAUR23-like [Cucurbita moschata] >KAG6605026.1 Auxin-re...	[more]

BLAST of CaUC11G214980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	7.2e-22	59.52	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	2.7e-21	60.76	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	4.7e-21	59.49	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	1.0e-20	59.49	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJF6	1.4e-20	57.83	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of CaUC11G214980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6T7	2.6e-43	91.67	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1KZJ6	3.4e-43	91.67	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111499688...	[more]
A0A6J1G6U1	5.9e-43	90.63	auxin-responsive protein SAUR23-like OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1JHE3	7.7e-43	90.63	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1FVI4	7.7e-43	90.63	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of CaUC11G214980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	5.5e-25	56.70	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.2e-24	56.84	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.7e-24	53.33	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	5.1e-23	50.93	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.1e-23	59.52	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..93 e-value: 1.7E-26 score: 92.2
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G214980.1	CaUC11G214980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin