CaUC11G213370 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G213370
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	stress-induced protein KIN2-like
Location	Ciama_Chr11: 26525321 .. 26525703 (+)
RNA-Seq Expression	CaUC11G213370
Synteny	CaUC11G213370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAACTCCCAAAAGATGAGTTACCATGCAGGAGAAGCCAAAGGTCAAGCGCAGGTTTACATCACTATAAATTTAGTAACATAATTACCATTTAATAATTTCATTCAATAAGTTTGTTTTATGTCATTTTTTAATTGTTTGTCAATTAGTCGTACGTTTTTATTGTCACTTCATATTACTTTTTGGTTACCGTTGGAAAATATCTAATTTGGTGTATTTTGTTAATTTGTGCTGTTATATAGGAGAAAGTGAGCAATATGATGGACAAGGCAAGCGATGTAGCTCAATCAGCTAAGGAATCAGTGCAGGAAGCAGGACAACAAATGAAGGCCAAAGCACAAGGAGCAGCTGATGCTGTCAAGGATGCAGTTAATAAATGA

mRNA sequence

ATGGATAACTCCCAAAAGATGAGTTACCATGCAGGAGAAGCCAAAGGTCAAGCGCAGGTTTACATCACTATAAATTTAGAGAAAGTGAGCAATATGATGGACAAGGCAAGCGATGTAGCTCAATCAGCTAAGGAATCAGTGCAGGAAGCAGGACAACAAATGAAGGCCAAAGCACAAGGAGCAGCTGATGCTGTCAAGGATGCAGTTAATAAATGA

Coding sequence (CDS)

ATGGATAACTCCCAAAAGATGAGTTACCATGCAGGAGAAGCCAAAGGTCAAGCGCAGGTTTACATCACTATAAATTTAGAGAAAGTGAGCAATATGATGGACAAGGCAAGCGATGTAGCTCAATCAGCTAAGGAATCAGTGCAGGAAGCAGGACAACAAATGAAGGCCAAAGCACAAGGAGCAGCTGATGCTGTCAAGGATGCAGTTAATAAATGA

Protein sequence

MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGAADAVKDAVNK

Homology

[Close]

BLAST of CaUC11G213370 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 103.6 bits (257), Expect = 7.2e-19
Identity = 58/71 (81.69%), Postives = 61/71 (85.92%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDNSQKMSYHAGEAKGQ Q       EKVSNMMDKASD AQSAKES+QEAGQQ+KAKAQG
Sbjct: 1  MDNSQKMSYHAGEAKGQTQ-------EKVSNMMDKASDAAQSAKESIQEAGQQVKAKAQG 60

Query: 61 AADAVKDAVNK 72
          A DAVKDA+NK
Sbjct: 61 ATDAVKDAINK 64

[Close]

BLAST of CaUC11G213370 vs. NCBI nr
Match: XP_038891124.1 (late embryogenesis abundant protein 7-like [Benincasa hispida])

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-18
Identity = 58/71 (81.69%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDNSQKMSYHAGEAKGQAQ       EK+SNMMDKA D AQSAKESVQE GQQMKAK QG
Sbjct: 1  MDNSQKMSYHAGEAKGQAQ-------EKLSNMMDKAGDAAQSAKESVQEVGQQMKAKVQG 60

Query: 61 AADAVKDAVNK 72
          AADAVKDA+NK
Sbjct: 61 AADAVKDAINK 64

[Close]

BLAST of CaUC11G213370 vs. NCBI nr
Match: XP_038891139.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDNSQKMSYHAGEAKGQAQ       EKVS+MMDKASDVAQSAKE+VQEAGQQ+KAK QG
Sbjct: 1  MDNSQKMSYHAGEAKGQAQ-------EKVSSMMDKASDVAQSAKETVQEAGQQVKAKVQG 60

Query: 61 AADAVKDAVNK 72
          A DAVKDA+NK
Sbjct: 61 ATDAVKDAINK 64

[Close]

BLAST of CaUC11G213370 vs. NCBI nr
Match: XP_038891163.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-18
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDNSQKMSYHAGEAKGQAQ       EKVSNMMDKA+D AQS KES+QEAGQQ+KAKAQG
Sbjct: 1  MDNSQKMSYHAGEAKGQAQ-------EKVSNMMDKANDAAQSTKESMQEAGQQIKAKAQG 60

Query: 61 AADAVKDAVNK 72
          AA+AVKDAVNK
Sbjct: 61 AAEAVKDAVNK 64

[Close]

BLAST of CaUC11G213370 vs. NCBI nr
Match: XP_004141485.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical protein Csa_008504 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 6.1e-18
Identity = 58/70 (82.86%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGA 61
          DNSQKMSYHAGEAKGQ Q       EK+SNMMDKASD AQSAKESVQE GQQM AKAQGA
Sbjct: 3  DNSQKMSYHAGEAKGQTQ-------EKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGA 62

Query: 62 ADAVKDAVNK 72
          ADAVKDAVNK
Sbjct: 63 ADAVKDAVNK 65

[Close]

BLAST of CaUC11G213370 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-18
Identity = 58/70 (82.86%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGA 61
          DNSQKMSYHAGEAKGQ Q       EK+SNMMDKASD AQSAKESVQE GQQM AKAQGA
Sbjct: 3  DNSQKMSYHAGEAKGQTQ-------EKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGA 62

Query: 62 ADAVKDAVNK 72
          ADAVKDAVNK
Sbjct: 63 ADAVKDAVNK 65

[Close]

BLAST of CaUC11G213370 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 58/71 (81.69%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDNSQKMSYHAGEAKGQ Q       EKVSNMMDKAS+ AQS KESVQEAGQQM AKAQG
Sbjct: 1  MDNSQKMSYHAGEAKGQTQ-------EKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQG 60

Query: 61 AADAVKDAVNK 72
          A DAVKDAVNK
Sbjct: 61 ATDAVKDAVNK 64

[Close]

BLAST of CaUC11G213370 vs. ExPASy TrEMBL
Match: A0A1S3CA67 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 58/71 (81.69%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDNSQKMSYHAGEAKGQ Q       EKVSNMMDKAS+ AQS KESVQEAGQQM AKAQG
Sbjct: 1  MDNSQKMSYHAGEAKGQTQ-------EKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQG 60

Query: 61 AADAVKDAVNK 72
          A DAVKDAVNK
Sbjct: 61 ATDAVKDAVNK 64

[Close]

BLAST of CaUC11G213370 vs. ExPASy TrEMBL
Match: A0A6J1E4Q8 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 57/67 (85.07%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGA 61
          DNSQKMSYHAGEAKGQAQ       EK SNMMDKASD AQSAKESVQEAGQQ+KAKAQGA
Sbjct: 3  DNSQKMSYHAGEAKGQAQ-------EKASNMMDKASDAAQSAKESVQEAGQQVKAKAQGA 62

Query: 62 ADAVKDA 69
          ADAVKDA
Sbjct: 63 ADAVKDA 62

[Close]

BLAST of CaUC11G213370 vs. ExPASy TrEMBL
Match: A0A6J1BXT9 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111006690 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-17
Identity = 56/70 (80.00%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGA 61
          DNSQKM+YHAGEAKGQAQ       EK SN+MDKASD AQSAKESVQEAGQQ+KAKAQGA
Sbjct: 3  DNSQKMAYHAGEAKGQAQ-------EKASNLMDKASDKAQSAKESVQEAGQQVKAKAQGA 62

Query: 62 ADAVKDAVNK 72
           DAVKDA NK
Sbjct: 63 IDAVKDAANK 65

[Close]

BLAST of CaUC11G213370 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-13
Identity = 39/66 (59.09%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 2  DNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGA 61
          +NSQ MS++AG+AKGQ Q       EK SN++DKAS+ AQSAKES+QE GQQ+K KAQGA
Sbjct: 3  NNSQSMSFNAGQAKGQTQ-------EKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGA 61

Query: 62 ADAVKD 68
          ++ +K+
Sbjct: 63 SETIKE 61

[Close]

BLAST of CaUC11G213370 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-12
Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 3  NSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQGAA 62
          NSQ +S+ AG+AKGQ Q       EK S MMDKAS+ AQSAKES++E GQQ+K KAQGA 
Sbjct: 4  NSQNISFQAGQAKGQTQ-------EKASTMMDKASNAAQSAKESLKETGQQIKEKAQGAT 62

Query: 63 DAVKDA 69
          ++VK+A
Sbjct: 64 ESVKNA 62

[Close]

BLAST of CaUC11G213370 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 67.4 bits (163), Expect = 5.3e-12
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 1  MDNSQKMSYHAGEAKGQAQVYITINLEKVSNMMDKASDVAQSAKESVQEAGQQMKAKAQG 60
          MDN Q  SY AG+A GQ +       EK   MMDKA D A SA++S+Q+ GQQMK KAQG
Sbjct: 1  MDNKQNASYQAGQATGQTK-------EKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQG 60

Query: 61 AADAVKD 68
          AAD VKD
Sbjct: 61 AADVVKD 60

The following BLAST results are available for this feature:

BLAST of CaUC11G213370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891080.1	7.2e-19	81.69	late embryogenesis abundant protein 2-like [Benincasa hispida]	[more]
XP_038891124.1	1.2e-18	81.69	late embryogenesis abundant protein 7-like [Benincasa hispida]	[more]
XP_038891139.1	1.6e-18	81.69	stress-induced protein KIN2-like [Benincasa hispida]	[more]
XP_038891163.1	2.1e-18	81.69	stress-induced protein KIN2-like [Benincasa hispida]	[more]
XP_004141485.1	6.1e-18	82.86	late embryogenesis abundant protein 2 [Cucumis sativus] >KGN52546.1 hypothetical...	[more]

BLAST of CaUC11G213370 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC11G213370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN2	2.9e-18	82.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1	[more]
A0A5D3BPC0	3.8e-18	81.69	Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CA67	3.8e-18	81.69	stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV...	[more]
A0A6J1E4Q8	1.5e-17	85.07	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026049 ...	[more]
A0A6J1BXT9	2.5e-17	80.00	stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111006690 ...	[more]

BLAST of CaUC11G213370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53820.1	2.2e-13	59.09	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G38760.1	2.4e-12	60.61	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	5.3e-12	58.21	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..71
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..69
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G213370.1	CaUC11G213370.1	mRNA