CaUC11G213110 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCTTAAAATATTTTTCTATGGGAAATATTTAGCCTTATAAACTACAGAGAAGAGTGTGGTATTAGTAAAAAGCTTGAAGAAGGGGGCTTCTTAAAAGGCTTGAATTCAACAAGTTGCCCATTTCTTCAAAGCCTTAGAATGGAGCAGTTTCATTATGGTTCTCAAAGAAGAGAAGAACCAGATGACTTCAATTTGAGAGAATGGCCAGTTAGGGCAAGGATCAAGTGTGAGAACACAAGTTCCAGAAGGTTTTCAGGGTCTTATATAAGAAGCTTTAGGGAAGATGGCAGATCCTTTAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTCCATGAGAGGTACTTAAAAAGAAAAAACACCTCTCTGTTTTCTGCTTCAAGTCAGTTTTTCCTGTCATGGATTTTCTCTCATCTCATCTTTTGTTTCTTGATTTCTTTTGCAGATGAAATTGACCCATCAACCTATTCTTTCACTACTGCTCTCAAAGGTAAGACATTTTTGCAAACACCCCAAGGAACCACTCCATAAACCTTGGTTTCAGCTGAGAAAAGCAAATAAAAAAAAAATGGAGTTGCCTTTCAATAGTAAAGTGGGTGGTGGGTTTTTGTGCAGCATTGCAAGCCAGGTCAAGTTATAATAGCTGGGAAAGCTTGTCACCAGAGGGATTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTTTCTGGGGAGGTTCCAATGGAGTGTTTATCTGCTAAAACACTAAGTGCAAGATCATTCAGAAATTTCAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCAGACAACTCCAAGATAGGCCAATCAATTTTCCACAGGAGGAAGCAGTTCATCAGCATCCAATTCCAGGTATCACTACTTTTTTTTGTTCCCTTGCTTGGAAAGGTTTCTTTGAAGCTGGATTCAATATCAAAGAAGTTCATTGTTTGAGTTGTAGAAAAGAAAGTGGAGGGGATGACGACCAAGGATGTGGGAACTCAAAGCACACCACCTGATAGAAGTTCAACAAGTCCTAGTCCTGCATCGACACCTCCCATTGACGAGAGATCGTTGAAAGAATATGGGAAAGAACAAACTAGTTCACCAAATTCTTATTCCATTCATAAAAAGAAAGCAGAGAAAGCGGTATGTACATTCTATGATCTTTCTAATGATAATAATGATTTAGTAGAAGGAAGATTCAAAGGGGTTTGAGATGACAAGCTTAATACAAATACAAACCCAACTAATTAAGAAATCTAGGAAGAAACTTTAGGCTGATTAACCTATTCCCCAAAACATAAGAGTGCAAACAGTAATAATTTGGATGTTTCAGTCTCTTTCTCGTTGATTGTGCCTTTCTACAAATGGGGCCGTCAAGATTAGGCTTGACTGATTCAGATCAATGATCTAACAAAATGGAGAAGTGTAAGAGTAAAAATGGGACCACGCTCTTCACATATTCCTATAGGCTATAGCTTACAGACCTATGATTTGCTCCCATGGTTGTCTGCTTCCCAACAACTCATACAGTTGTGGTTGTCTCTGTTTGTGGGAAGCATTTTCCGGACAGCAAAAAAGAATCAATCAGATGGGGAAAACAGAAAAAGAACTTGGAGGACTCTAACCAAGAATACATCAGTATCAAGAGCAAAGCCAATTTCACAAAACATATTTCCAAACTCCCAACTACCATAAACACTGTACCAAACATTTAACAATCCCACTTCTCCAACCATTCCCACCCTCCTTGCTTTGTTGTGGAGCCCATCGAGATTCTTTCCTGCAAAATACAAAATTGGTTCTCACAGTTTCTGCTGCTTTATATTGAAATTTCTTCTTTATTTCACTCTTTCTGGAAAGAATGGTTATGCATTTGAAGGATATGGTCAAATGGCTAAAATAATGAAAAAGAAAAAAATGACTGAATCATTGCATCTGTCATTCATTAGACATCCACATGCTTGTACCTCAATATCAGTAAGTATAATTTCAAAATCAGTCCACAGGTGAAAGGGCCGGGATTCAAGGGAAACACTAAAAGTGAAAAGAAACAAAAAAAGTAAAACTTAAAAACAGTTCTCAAAGGTTATTGTTGAGCAGAAGAAGTGACCCTTTGTGGATTTTGTGTTACTGGTATGATGGAACTGTGATTCATCTTTTCACCAGTAGCTTTGAACATTGTTTGGTAAGAATCAATATGGATCATAATTTGTAACTTTGTTAGAGTGCCTTTTTTTCTTCTCCTTTCCTCCCCCAATAACAACAGACTATACCTTTCAGTTGAGGAGGAAAAGGTAACAGCTCTAAATTAATCAAAACTTCACTTTCACAATGAAATGTATGAGGCTCAAAAGATAATTTAGTTGTACAGTCCTTCACGTGGCTAATCTTCTCATTTTGGGAATAAAATGTTATTCCAGCACAGAGATATTGCATTTCTCTCGTTCTTAAACCACAGGTGTTTAGTAAAGTTTGAGTATTTTCTACAATTTTCCATGAGGGTCATGTTCACAGATGACAATGCCTAAATTAGCAAATATAAGAGATATCACATTCTCCTCAGACCCATACACAACAGTAATGAGTCTAATTTGAGTGCAGGTGACAATTAAAGCAAGAAAAGAGAAGGAGATGACAAAAGGAGAAAAGGGAGATAGAAACAGTACAAACGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGAGATAAACACAAAACAGGAAAGAAAAACTTTTTACCTCATTTGAAAGGGTGCTGAAAAGTTACTGAGAAAATGGCAAATGGAGATTCGCTTTGTATTTCAGGCATATTTTTGCAGGTGTTAGTGGGGTTTGTGTTTGTGTTAAGAAATTTAAGAGCAATCATGGAGAGGGACCTCAGGCCTGGCGAGAAAGGTTAGGGCTTTTTAGTTTTGTGGTTCTCTGCTTTAGTGTTGGTGCCGAGTGATATTAGTTTTCGTTTATTGGGATGGTGAAAGTTGGGAGCAGCTTTACCTTCTCACTTCACGTGCCTGCCTTTGTCTTTACCTTTAAACAAACAAAGGTTTTAATAACTAGGATTATTAATTTCATTACCTTTCACTGGTTACTAAGAAATGAAGCTTCTATCAATTCAG AAAATCTTAAAATATTTTTCTATGGGAAATATTTAGCCTTATAAACTACAGAGAAGAGTGTGGTATTAGTAAAAAGCTTGAAGAAGGGGGCTTCTTAAAAGGCTTGAATTCAACAAGTTGCCCATTTCTTCAAAGCCTTAGAATGGAGCAGTTTCATTATGGTTCTCAAAGAAGAGAAGAACCAGATGACTTCAATTTGAGAGAATGGCCAGTTAGGGCAAGGATCAAGTGTGAGAACACAAGTTCCAGAAGGTTTTCAGGGTCTTATATAAGAAGCTTTAGGGAAGATGGCAGATCCTTTAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTCCATGAGAGATGAAATTGACCCATCAACCTATTCTTTCACTACTGCTCTCAAAGCATTGCAAGCCAGGTCAAGTTATAATAGCTGGGAAAGCTTGTCACCAGAGGGATTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTTTCTGGGGAGGTTCCAATGGAGTGTTTATCTGCTAAAACACTAAGTGCAAGATCATTCAGAAATTTCAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCAGACAACTCCAAGATAGGCCAATCAATTTTCCACAGGAGGAAGCAGTTCATCAGCATCCAATTCCAGAAAAGAAAGTGGAGGGGATGACGACCAAGGATGTGGGAACTCAAAGCACACCACCTGATAGAAGTTCAACAAGTCCTAGTCCTGCATCGACACCTCCCATTGACGAGAGATCGTTGAAAGAATATGGGAAAGAACAAACTAGTTCACCAAATTCTTATTCCATTCATAAAAAGAAAGCAGAGAAAGCGGTGACAATTAAAGCAAGAAAAGAGAAGGAGATGACAAAAGGAGAAAAGGGAGATAGAAACAGTACAAACGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGAGATAAACACAAAACAGGAAAGAAAAACTTTTTACCTCATTTGAAAGGGTGCTGAAAAGTTACTGAGAAAATGGCAAATGGAGATTCGCTTTGTATTTCAGGCATATTTTTGCAGGTGTTAGTGGGGTTTGTGTTTGTGTTAAGAAATTTAAGAGCAATCATGGAGAGGGACCTCAGGCCTGGCGAGAAAGGTTAGGGCTTTTTAGTTTTGTGGTTCTCTGCTTTAGTGTTGGTGCCGAGTGATATTAGTTTTCGTTTATTGGGATGGTGAAAGTTGGGAGCAGCTTTACCTTCTCACTTCACGTGCCTGCCTTTGTCTTTACCTTTAAACAAACAAAGGTTTTAATAACTAGGATTATTAATTTCATTACCTTTCACTGGTTACTAAGAAATGAAGCTTCTATCAATTCAG ATGGAGCAGTTTCATTATGGTTCTCAAAGAAGAGAAGAACCAGATGACTTCAATTTGAGAGAATGGCCAGTTAGGGCAAGGATCAAGTGTGAGAACACAAGTTCCAGAAGGTTTTCAGGGTCTTATATAAGAAGCTTTAGGGAAGATGGCAGATCCTTTAGATCAAACATAACCATCTCCAGCACTGCTTCTTCCCCAGGCTACTCCATGAGAGATGAAATTGACCCATCAACCTATTCTTTCACTACTGCTCTCAAAGCATTGCAAGCCAGGTCAAGTTATAATAGCTGGGAAAGCTTGTCACCAGAGGGATTTGCTTTGAACTCAAAGTGGTATGAAGCAGAGAAATATATTTGCAATCCTCTTTCTGGGGAGGTTCCAATGGAGTGTTTATCTGCTAAAACACTAAGTGCAAGATCATTCAGAAATTTCAGAACCAGAATCACCATGTCTGCTCCTTTAGTTTATTCCACAAATTCCAGACAACTCCAAGATAGGCCAATCAATTTTCCACAGGAGGAAGCAGTTCATCAGCATCCAATTCCAGAAAAGAAAGTGGAGGGGATGACGACCAAGGATGTGGGAACTCAAAGCACACCACCTGATAGAAGTTCAACAAGTCCTAGTCCTGCATCGACACCTCCCATTGACGAGAGATCGTTGAAAGAATATGGGAAAGAACAAACTAGTTCACCAAATTCTTATTCCATTCATAAAAAGAAAGCAGAGAAAGCGGTGACAATTAAAGCAAGAAAAGAGAAGGAGATGACAAAAGGAGAAAAGGGAGATAGAAACAGTACAAACGAGCAAACGTGGAGGCAAGGTGGGTGCCTGTCATGGATGAGAACAAGACAGAGAGATAAACACAAAACAGGAAAGAAAAACTTTTTACCTCATTTGAAAGGGTGCTGA MEQFHYGSQRREEPDDFNLREWPVRARIKCENTSSRRFSGSYIRSFREDGRSFRSNITISSTASSPGYSMRDEIDPSTYSFTTALKALQARSSYNSWESLSPEGFALNSKWYEAEKYICNPLSGEVPMECLSAKTLSARSFRNFRTRITMSAPLVYSTNSRQLQDRPINFPQEEAVHQHPIPEKKVEGMTTKDVGTQSTPPDRSSTSPSPASTPPIDERSLKEYGKEQTSSPNSYSIHKKKAEKAVTIKARKEKEMTKGEKGDRNSTNEQTWRQGGCLSWMRTRQRDKHKTGKKNFLPHLKGC Homology
BLAST of CaUC11G213110 vs. NCBI nr
Match: XP_038889564.1 (uncharacterized protein LOC120079450 [Benincasa hispida]) HSP 1 Score: 557.8 bits (1436), Expect = 5.9e-155 Identity = 287/304 (94.41%), Postives = 293/304 (96.38%), Query Frame = 0
BLAST of CaUC11G213110 vs. NCBI nr
Match: XP_004141499.1 (uncharacterized protein LOC101213588 isoform X1 [Cucumis sativus] >KGN52573.1 hypothetical protein Csa_008692 [Cucumis sativus]) HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148 Identity = 277/304 (91.12%), Postives = 286/304 (94.08%), Query Frame = 0
BLAST of CaUC11G213110 vs. NCBI nr
Match: XP_008459461.1 (PREDICTED: uncharacterized protein LOC103498590 isoform X2 [Cucumis melo]) HSP 1 Score: 536.2 bits (1380), Expect = 1.8e-148 Identity = 277/304 (91.12%), Postives = 287/304 (94.41%), Query Frame = 0
BLAST of CaUC11G213110 vs. NCBI nr
Match: XP_016902450.1 (PREDICTED: uncharacterized protein LOC103498590 isoform X1 [Cucumis melo]) HSP 1 Score: 518.5 bits (1334), Expect = 4.0e-143 Identity = 277/339 (81.71%), Postives = 287/339 (84.66%), Query Frame = 0
BLAST of CaUC11G213110 vs. NCBI nr
Match: XP_022134098.1 (uncharacterized protein LOC111006452 isoform X2 [Momordica charantia]) HSP 1 Score: 508.1 bits (1307), Expect = 5.4e-140 Identity = 269/308 (87.34%), Postives = 283/308 (91.88%), Query Frame = 0
BLAST of CaUC11G213110 vs. ExPASy TrEMBL
Match: A0A0A0KSN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644010 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 5.2e-149 Identity = 277/304 (91.12%), Postives = 286/304 (94.08%), Query Frame = 0
BLAST of CaUC11G213110 vs. ExPASy TrEMBL
Match: A0A1S3CBG4 (uncharacterized protein LOC103498590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498590 PE=4 SV=1) HSP 1 Score: 536.2 bits (1380), Expect = 8.9e-149 Identity = 277/304 (91.12%), Postives = 287/304 (94.41%), Query Frame = 0
BLAST of CaUC11G213110 vs. ExPASy TrEMBL
Match: A0A1S4E398 (uncharacterized protein LOC103498590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498590 PE=4 SV=1) HSP 1 Score: 518.5 bits (1334), Expect = 1.9e-143 Identity = 277/339 (81.71%), Postives = 287/339 (84.66%), Query Frame = 0
BLAST of CaUC11G213110 vs. ExPASy TrEMBL
Match: A0A6J1C127 (uncharacterized protein LOC111006452 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006452 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.6e-140 Identity = 269/308 (87.34%), Postives = 283/308 (91.88%), Query Frame = 0
BLAST of CaUC11G213110 vs. ExPASy TrEMBL
Match: A0A6J1BYM2 (uncharacterized protein LOC111006452 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006452 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 8.4e-139 Identity = 269/310 (86.77%), Postives = 283/310 (91.29%), Query Frame = 0
BLAST of CaUC11G213110 vs. TAIR 10
Match: AT5G16030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 228.0 bits (580), Expect = 1.0e-59 Identity = 171/343 (49.85%), Postives = 207/343 (60.35%), Query Frame = 0
BLAST of CaUC11G213110 vs. TAIR 10
Match: AT5G16030.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 224.9 bits (572), Expect = 8.5e-59 Identity = 173/351 (49.29%), Postives = 208/351 (59.26%), Query Frame = 0
BLAST of CaUC11G213110 vs. TAIR 10
Match: AT5G16030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 33116 Blast hits to 13831 proteins in 816 species: Archae - 63; Bacteria - 1163; Metazoa - 13507; Fungi - 3213; Plants - 1270; Viruses - 1083; Other Eukaryotes - 12817 (source: NCBI BLink). ) HSP 1 Score: 223.4 bits (568), Expect = 2.5e-58 Identity = 171/344 (49.71%), Postives = 207/344 (60.17%), Query Frame = 0
BLAST of CaUC11G213110 vs. TAIR 10
Match: AT3G02500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 198.0 bits (502), Expect = 1.1e-50 Identity = 140/303 (46.20%), Postives = 185/303 (61.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|