CaUC11G212450 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G212450
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	LOB domain-containing protein
Location	Ciama_Chr11: 25424281 .. 25425372 (-)
RNA-Seq Expression	CaUC11G212450
Synteny	CaUC11G212450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGGTTCTCTTTTCCCCCTTTTATGTTGTTTGATAAAGGGAGATGAAGGAGAAATTATGAACAGTAGAAAGAGATAGAAAAAGGAGAGGTTTTTATGAGAAATGTACAAAAGAGAACATAGAGTACTAAAGAGTGTAGGGTATTTTTGCAGATTCCGAAACTATCATTTTCACTTCACAAAGCTGAAAACCAACTTTCCAGTAAATTTGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTACATTATTTTTACTTTCTTCATACAGATCATCAATATCTTGCTTTATGTATCAAATATGATGTCTCATCCTAAGTTAGGAGCACAAATAATGCCACCCCATGTTCTTTAATTCCCACTTTCTGAAAAATCAATTAAAAGTGTTTCTTCTTTTCCCTTGAATAGTCTCTTTCAAACTTTCAATTCTGCATTTACTCTTCAAACCCCATAACCAAATTTAGGCCCCACCCCTTGTTTTTTTATTACTCTAATCACAAATCACCACCAAATCCCTTCATATATAAATACACATCCTTTGTTGTAAAGAAGATGACATTGTTTTAGCATTAACATAATGAAGCAAGAGCAGGCATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCCTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATCGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA

mRNA sequence

ATGGAGATTCCGAAACTATCATTTTCACTTCACAAAGCTGAAAACCAACTTTCCACAAGAGCAGGCATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCCTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATCGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA

Coding sequence (CDS)

ATGGAGATTCCGAAACTATCATTTTCACTTCACAAAGCTGAAAACCAACTTTCCACAAGAGCAGGCATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCCTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATCGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA

Protein sequence

MEIPKLSFSLHKAENQLSTRAGMRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA

Homology

[Close]

BLAST of CaUC11G212450 vs. NCBI nr
Match: XP_038885630.1 (LOB domain-containing protein 21 [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 9.2e-82
Identity = 159/174 (91.38%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAN--- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAN   
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANDSS 120

Query: 143 ------TSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 188
                 +SSSSS ENCVVNMSYGG S S+GQSSSDITQYGYLCDF+HFPYPFKA
Sbjct: 121 HHNLNVSSSSSSFENCVVNMSYGGLSFSAGQSSSDITQYGYLCDFNHFPYPFKA 174

[Close]

BLAST of CaUC11G212450 vs. NCBI nr
Match: XP_004138415.1 (LOB domain-containing protein 21 [Cucumis sativus] >KAE8646568.1 hypothetical protein Csa_005704 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 157/172 (91.28%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAN--- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAN   
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANNNT 120

Query: 143 ---TSSSSSLENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 188
              +SSSS +ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSSCVENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

[Close]

BLAST of CaUC11G212450 vs. NCBI nr
Match: KAA0055025.1 (LOB domain-containing protein 21-like [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 5.6e-79
Identity = 159/171 (92.98%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSS---LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 188
           SSSSS    ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 171

[Close]

BLAST of CaUC11G212450 vs. NCBI nr
Match: XP_008441477.1 (PREDICTED: LOB domain-containing protein 21-like [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 7.3e-79
Identity = 159/172 (92.44%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSS----LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 188
           SSSSS     ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

[Close]

BLAST of CaUC11G212450 vs. NCBI nr
Match: KAG6578457.1 (LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.7 bits (761), Expect = 6.8e-77
Identity = 156/186 (83.87%), Postives = 163/186 (87.63%), Query Frame = 0


Query: 15  NQLSTRAGMRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASN 74
           N +   A MRG HETRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASN
Sbjct: 87  NAVQKGAAMRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASN 146

Query: 75  VSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARL 134
           VSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+AKARL
Sbjct: 147 VSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARL 206

Query: 135 ARYA----------NTSSSSS---LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHF 188
           ARYA          ++SSSSS   LENCVVNM YGG SI++GQSSS ITQYGYLCDF+HF
Sbjct: 207 ARYADSDHNYSTFSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHF 266

[Close]

BLAST of CaUC11G212450 vs. ExPASy Swiss-Prot
Match: Q9SRL8 (LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-45
Identity = 93/121 (76.86%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HE RSSSSCAACKLLKRRC PTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSS 142
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL  ++  ++
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNN 120

Query: 143 S 144
           S
Sbjct: 121 S 120

[Close]

BLAST of CaUC11G212450 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of CaUC11G212450 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 72/124 (58.06%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 32  SSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTV 91
           +S CAACK L+R+C+P CIFAPYF  +EP KFA VHK+FGASNV+K+L E+   QRED V
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 92  NSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSLENCVV 151
           NSLAYEAEAR+RDPVYGC+GAI+ LQ ++  LQ +L  A A LA Y  ++S++     VV
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGNVV 128

Query: 152 NMSY 156
           ++ +
Sbjct: 129 DLVF 132

[Close]

BLAST of CaUC11G212450 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-34
Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           SSS CAACK L+R+C   C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 4   SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDA 63

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Sbjct: 64  VNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

[Close]

BLAST of CaUC11G212450 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 145.6 bits (366), Expect = 5.7e-34
Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C   C+FAPYF  +EP KFA VH++FGASNVSKIL EV   QRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA 139
           VNSLAYEAEARL+DPVYGC+GAI++LQ +++ LQ +L    A L RYA
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CaUC11G212450 vs. ExPASy TrEMBL
Match: A0A5A7UN14 (LOB domain-containing protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001800 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.7e-79
Identity = 159/171 (92.98%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSS---LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 188
           SSSSS    ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 171

[Close]

BLAST of CaUC11G212450 vs. ExPASy TrEMBL
Match: A0A1S3B334 (LOB domain-containing protein 21-like OS=Cucumis melo OX=3656 GN=LOC103485585 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.5e-79
Identity = 159/172 (92.44%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA--NT 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA  NT
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYAHNNT 120

Query: 143 SSSSS----LENCVVNMSYGGFSISSGQSSS-DITQYGYLCDFSHFPYPFKA 188
           SSSSS     ENCVVNMSYGG S S+ QSSS DITQYGYLCDF+HFPYPFKA
Sbjct: 121 SSSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

[Close]

BLAST of CaUC11G212450 vs. ExPASy TrEMBL
Match: A0A6J1JS05 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111489259 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.1e-76
Identity = 155/182 (85.16%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HETRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+AKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 143 --NTSSSSS-----------LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPF 188
             NT SSSS           LENCVVNM YGG SI++GQSSS ITQYGYLCDF+HFPYPF
Sbjct: 121 NYNTFSSSSSSSSSPSSLGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPF 180

[Close]

BLAST of CaUC11G212450 vs. ExPASy TrEMBL
Match: A0A6J1FKB9 (LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111445010 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 153/179 (85.47%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HETRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHETRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLA+AKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLAIAKARLARYADSDH 120

Query: 143 -------NTSSSSS---LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 188
                  ++SSSSS   LENCVVNM YGG SI++GQSSS ITQYGYLCDF+HFPYP KA
Sbjct: 121 NYSTFSSSSSSSSSMGVLENCVVNMPYGGLSIAAGQSSSAITQYGYLCDFTHFPYPSKA 179

[Close]

BLAST of CaUC11G212450 vs. ExPASy TrEMBL
Match: A0A6J1JJ75 (LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111487426 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.3e-75
Identity = 153/178 (85.96%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG H+TRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYA---- 142
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARYA    
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120

Query: 143 -NTSSSSS--------LENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 188
            NTSSSSS        LE+CVVNMSYGG S  SGQSS DI+QYGYLCDF+HFPYPF+A
Sbjct: 121 NNTSSSSSSSSSSLGVLESCVVNMSYGGLSF-SGQSSDDISQYGYLCDFTHFPYPFQA 177

[Close]

BLAST of CaUC11G212450 vs. TAIR 10
Match: AT3G11090.1 (LOB domain-containing protein 21 )

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-46
Identity = 93/121 (76.86%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 23  MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 82
           MRG HE RSSSSCAACKLLKRRC PTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 83  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSS 142
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM+ELQHDLA+A+ RL  ++  ++
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNN 120

Query: 143 S 144
           S
Sbjct: 121 S 120

[Close]

BLAST of CaUC11G212450 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.1e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of CaUC11G212450 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.1e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of CaUC11G212450 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.1e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of CaUC11G212450 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.1e-36
Identity = 68/107 (63.55%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 31  SSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 90
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 91  VNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY 138
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

The following BLAST results are available for this feature:

BLAST of CaUC11G212450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885630.1	9.2e-82	91.38	LOB domain-containing protein 21 [Benincasa hispida]	[more]
XP_004138415.1	2.5e-79	91.28	LOB domain-containing protein 21 [Cucumis sativus] >KAE8646568.1 hypothetical pr...	[more]
KAA0055025.1	5.6e-79	92.98	LOB domain-containing protein 21-like [Cucumis melo var. makuwa]	[more]
XP_008441477.1	7.3e-79	92.44	PREDICTED: LOB domain-containing protein 21-like [Cucumis melo]	[more]
KAG6578457.1	6.8e-77	83.87	LOB domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of CaUC11G212450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRL8	1.9e-45	76.86	LOB domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=LBD21 PE=2 S...	[more]
O04479	1.1e-34	63.55	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q9FML4	1.1e-34	58.06	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
Q9FKZ3	2.5e-34	64.49	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
Q8L8Q3	5.7e-34	63.89	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]

BLAST of CaUC11G212450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UN14	2.7e-79	92.98	LOB domain-containing protein 21-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B334	3.5e-79	92.44	LOB domain-containing protein 21-like OS=Cucumis melo OX=3656 GN=LOC103485585 PE...	[more]
A0A6J1JS05	2.1e-76	85.16	LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC11148925...	[more]
A0A6J1FKB9	1.8e-75	85.47	LOB domain-containing protein 21-like OS=Cucurbita moschata OX=3662 GN=LOC111445...	[more]
A0A6J1JJ75	5.3e-75	85.96	LOB domain-containing protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC11148742...	[more]

BLAST of CaUC11G212450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11090.1	1.3e-46	76.86	LOB domain-containing protein 21	[more]
AT1G65620.1	8.1e-36	63.55	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	8.1e-36	63.55	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	8.1e-36	63.55	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	8.1e-36	63.55	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..140
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 23..160
None	No IPR available	PANTHER	PTHR31301:SF24	LOB DOMAIN-CONTAINING PROTEIN 21	coord: 23..160
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 34..131 e-value: 1.7E-38 score: 131.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 33..134 score: 25.397135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G212450.1	CaUC11G212450.1	mRNA